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ONTOLOGY REPORT - ANNOTATIONS


Term:quaternary ammonium group binding
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Accession:GO:0050997 term browser browse the term
Definition:Binding to a quaternary ammonium group, including glycine betaine, choline, carnitine and proline. A quaternary ammonium group is any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.
Synonyms:exact_synonym: quaternary amine binding


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quaternary ammonium group binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrm3 cholinergic receptor, muscarinic 3 enables IDA 4-DAMP methiodide CHEBI:73340 RGD PMID:8075871 RGD:2303390 NCBI chr17:60,005,137...60,467,250
Ensembl chr17:60,005,202...60,467,278
JBrowse link
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit IDA CHEBI:18723,CHEBI:3385 RGD PMID:15016836 RGD:2303194 NCBI chr15:40,342,317...40,358,601
Ensembl chr15:40,342,317...40,358,601
JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit IDA CHEBI:18723,CHEBI:3385 RGD PMID:15016836 RGD:2303194 NCBI chr 3:168,136,246...168,157,839
Ensembl chr 3:168,136,266...168,156,957
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit IDA CHEBI:18723,CHEBI:3385 RGD PMID:15016836 RGD:2303194 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
phosphatidylcholine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 enables ISO (PMID:24097981) RGD PMID:24097981 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170
JBrowse link
G Aldob aldolase, fructose-bisphosphate B IPI RGD PMID:9448062 RGD:2302096 NCBI chr 5:63,889,045...63,902,086
Ensembl chr 5:63,889,046...63,902,116
JBrowse link
G Anxa13 annexin A13 NOT|enables ISO (PMID:15813707) RGD PMID:15813707 NCBI chr 7:89,884,356...89,936,907
Ensembl chr 7:89,884,356...89,936,907
JBrowse link
G Apoa1 apolipoprotein A1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Apoa2 apolipoprotein A2 enables IBA
ISO
PMID:21873635
(PMID:17264082)
RGD PMID:17264082 PMID:21873635 RGD:13792537 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355
JBrowse link
G Apoa4 apolipoprotein A4 enables IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:11940599), (PMID:1935934)
Ensembl
RGD
PMID:1935934 PMID:11940599 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
JBrowse link
G Apoa5 apolipoprotein A5 enables IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:16806135)
Ensembl
RGD
PMID:16806135 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:46,561,180...46,563,818
Ensembl chr 8:46,561,229...46,563,816
JBrowse link
G Chmp2a charged multivesicular body protein 2A enables ISO (PMID:18687924) RGD PMID:18687924 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
JBrowse link
G Chmp3 charged multivesicular body protein 3 enables ISO (PMID:18687924) RGD PMID:18687924 NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
JBrowse link
G Esyt1 extended synaptotagmin 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:928,848...946,199
Ensembl chr 7:928,848...946,199
JBrowse link
G Esyt2 extended synaptotagmin 2 enables IBA
ISO
PMID:21873635
(PMID:24847877)
RGD PMID:24847877 PMID:21873635 RGD:13792537 NCBI chr 6:137,219,653...137,312,590
Ensembl chr 6:137,219,707...137,312,590
JBrowse link
G Esyt3 extended synaptotagmin 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:99,870,418...99,917,298
Ensembl chr 8:99,871,149...99,917,232
JBrowse link
G Gpr119 G protein-coupled receptor 119 enables IBA
ISO
PMID:21873635
(MGI:3522385|PMID:15607732)
RGD PMID:15607732 PMID:21873635 MGI:3522385, RGD:13792537 NCBI chr  X:127,852,145...127,858,198
Ensembl chr  X:127,852,145...127,858,198
JBrowse link
G Gpr12 G protein-coupled receptor 12 enables ISO (MGI:2450224|PMID:12574419) RGD PMID:12574419 MGI:2450224 NCBI chr12:8,522,709...8,525,875
Ensembl chr12:8,522,953...8,527,973
JBrowse link
G Ighe immunoglobulin heavy constant epsilon enables IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Ighm immunoglobulin heavy constant mu enables IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Jchain joining chain of multimeric IgA and IgM contributes_to ISO (PMID:21786026) RGD PMID:21786026 NCBI chr14:19,538,560...19,546,384
Ensembl chr14:19,538,952...19,546,298
JBrowse link
G Nf1 neurofibromin 1 enables ISO
ISS
IEA
(PMID:17187824)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:17187824 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Pctp phosphatidylcholine transfer protein enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:12055623)
UniProt
RGD
PMID:12055623 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:74,808,887...74,856,260
Ensembl chr10:74,808,887...74,849,867
JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:9224626 PMID:21873635 RGD:10449001, RGD:13792537 NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357
JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:58,378,090...58,471,623
Ensembl chr  X:58,378,116...58,468,935
JBrowse link
G Pitpna phosphatidylinositol transfer protein, alpha enables IEA
ISO
IBA
IDA
GO_REF:0000107
(MGI:68294|PMID:8049244)
PMID:21873635
(PMID:14962392), (PMID:15522822), (PMID:16274224), (PMID:22822086)
Ensembl
RGD
PMID:8049244 PMID:14962392 PMID:15522822 PMID:16274224 PMID:22822086 More... GO_REF:0000107 MGI:68294, RGD:13792537, RGD:13210550 NCBI chr10:60,430,712...60,473,564
Ensembl chr10:60,430,748...60,471,342
JBrowse link
G Pitpnb phosphatidylinositol transfer protein, beta enables IDA
IEA
IBA
ISO
PMID:16274224
GO_REF:0000107
PMID:21873635
(PMID:16274224)
Ensembl
RGD
PMID:16274224 PMID:16274224 PMID:21873635 GO_REF:0000107, RGD:13210550, RGD:13792537 NCBI chr12:45,249,308...45,298,388
Ensembl chr12:45,249,333...45,298,314
JBrowse link
G Pitpnm1 phosphatidylinositol transfer protein, membrane-associated 1 enables IBA
ISO
PMID:21873635
(PMID:22822086)
RGD PMID:22822086 PMID:21873635 RGD:13792537 NCBI chr 1:201,394,099...201,407,523
Ensembl chr 1:201,394,149...201,407,522
JBrowse link
G Pitpnm2 phosphatidylinositol transfer protein, membrane-associated 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:32,347,455...32,479,103
Ensembl chr12:32,380,805...32,479,102
JBrowse link
G Pltp phospholipid transfer protein enables ISO
IBA
(PMID:9132017)
PMID:21873635
RGD PMID:9132017 PMID:21873635 RGD:13792537 NCBI chr 3:153,574,825...153,592,647
Ensembl chr 3:153,574,825...153,592,647
JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 enables ISO (PMID:23908768) RGD PMID:23908768 NCBI chr 3:104,168,549...104,230,107
Ensembl chr 3:104,170,013...104,230,056
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403
JBrowse link
G Rs1 retinoschisin 1 NOT|enables ISO (MGI:3717560|PMID:17325137) RGD PMID:17325137 MGI:3717560 NCBI chr  X:33,963,657...33,992,115
Ensembl chr  X:33,963,657...33,992,115
JBrowse link
G Scarb2 scavenger receptor class B, member 2 enables ISO (MGI:6112073|PMID:29199275) RGD PMID:29199275 MGI:6112073 NCBI chr14:15,558,271...15,609,813
Ensembl chr14:15,558,236...15,609,813
JBrowse link
G Serpina5 serpin family A member 5 enables ISO (PMID:9556620) RGD PMID:9556620 NCBI chr 6:123,009,224...123,028,412
Ensembl chr 6:123,023,306...123,028,407
JBrowse link
G Sestd1 SEC14 and spectrin domain containing 1 NOT|enables ISO (PMID:20164195) RGD PMID:20164195 NCBI chr 3:62,123,590...62,220,759
Ensembl chr 3:62,129,887...62,220,546
JBrowse link
G Vdac1 voltage-dependent anion channel 1 enables ISO (PMID:31015432) RGD PMID:31015432 NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
JBrowse link
G Vdac2 voltage-dependent anion channel 2 enables ISS
ISO
GO_REF:0000024
(PMID:31015432)
UniProt
RGD
PMID:31015432 GO_REF:0000024 NCBI chr15:2,462,877...2,476,802
Ensembl chr15:2,463,056...2,476,553
JBrowse link
thiamine pyrophosphate binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC141220.4 enables IEA GO_REF:0000002 InterPro GO_REF:0000002
G Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:72,355,201...72,406,725
Ensembl chr17:72,355,201...72,406,723
JBrowse link
G Hacl1 2-hydroxyacyl-CoA lyase 1 enables IDA
IBA
ISO
PMID:10468558
PMID:21873635
(PMID:10468558), (PMID:21708296)
RGD PMID:10468558 PMID:21708296 PMID:10468558 PMID:21873635 RGD:708588, RGD:13792537 NCBI chr16:6,826,881...6,863,027
Ensembl chr16:6,824,906...6,863,027
JBrowse link
G Ilvbl ilvB acetolactate synthase like enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:11,039,870...11,049,924
Ensembl chr 7:11,039,871...11,049,924
JBrowse link
G Ogdh oxoglutarate dehydrogenase enables ISO
ISS
(PMID:24495017)
GO_REF:0000024
RGD
UniProt
PMID:24495017 GO_REF:0000024 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479
JBrowse link
G Ogdhl oxoglutarate dehydrogenase L enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:7,578,305...7,604,385
Ensembl chr16:7,578,367...7,604,386
JBrowse link
G Tkt transketolase enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16116031 PMID:21873635 RGD:1580394, RGD:13792537 NCBI chr16:5,723,764...5,748,702
Ensembl chr16:5,723,762...5,748,698
JBrowse link
G Tktl1 transketolase-like 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:151,954,261...151,987,208
Ensembl chr  X:151,954,175...151,987,208
JBrowse link
G Tktl2 transketolase-like 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:23,202,460...23,209,741
Ensembl chr16:23,202,453...23,209,742
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19980
    binding 17010
      quaternary ammonium group binding 47
        hydroxyectoine binding 0
        phosphatidylcholine binding 34
        thiamine pyrophosphate binding 9
paths to the root