Ilvbl (ilvB acetolactate synthase like)

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Gene: Ilvbl (ilvB acetolactate synthase like) Rattus norvegicus

Analyze

Symbol:

Ilvbl

Name:

ilvB acetolactate synthase like

RGD ID:

1307988

Description:

Predicted to enable magnesium ion binding activity and thiamine pyrophosphate binding activity. Predicted to be involved in fatty acid alpha-oxidation. Predicted to be located in endoplasmic reticulum membrane. Orthologous to human ILVBL (ilvB acetolactate synthase like); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

2-hydroxyacyl-CoA lyase 2; acetolactate synthase-like protein; ilvB (bacterial acetolactate synthase)-like; LOC362843

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ILVBL (ilvB acetolactate synthase like)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Ilvbl (ilvB (bacterial acetolactate synthase)-like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ilvbl (ilvB acetolactate synthase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ILVBL (ilvB acetolactate synthase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ILVBL (ilvB acetolactate synthase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ilvbl (ilvB acetolactate synthase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ILVBL (ilvB acetolactate synthase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ILVBL (ilvB acetolactate synthase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ilvbl (ilvB acetolactate synthase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	HPS5 (HPS5 biogenesis of lysosomal organelles complex 2 subunit 2)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	ILVBL (ilvB acetolactate synthase like)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ilvbl (ilvB (bacterial acetolactate synthase)-like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ilvbl (ilvB (bacterial acetolactate synthase)-like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	ILV2	Alliance	DIOPT (Ensembl Compara\|SonicParanoid)
Caenorhabditis elegans (roundworm):	T26C12.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ilvbl	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	7	11,039,870 - 11,049,924 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	11,039,871 - 11,049,924 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	13,858,794 - 13,868,869 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	15,736,181 - 15,746,256 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	13,614,088 - 13,624,145 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	14,044,586 - 14,054,639 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	14,044,586 - 14,054,639 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	14,201,069 - 14,211,122 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	12,593,095 - 12,603,148 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	12,593,102 - 12,602,948 (-)	NCBI
Celera	7	9,161,349 - 9,171,402 (-)	NCBI		Celera
Cytogenetic Map	7	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

acetamide (EXP)

acrolein (ISO)

acrylamide (ISO)

alpha-pinene (ISO)

arachidonic acid (ISO)

Benoxacor (ISO)

benzo[e]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

beta-naphthoflavone (ISO)

bisphenol A (EXP,ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

chlordecone (ISO)

chlorpyrifos (ISO)

clofibrate (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

coumestrol (ISO)

crocidolite asbestos (ISO)

dibutyl phthalate (EXP)

Enterolactone (ISO)

epoxiconazole (ISO)

folic acid (ISO)

gentamycin (EXP)

hydrogen peroxide (ISO)

ivermectin (ISO)

leflunomide (EXP)

methapyrilene (ISO)

ozone (ISO)

paracetamol (ISO)

pentachlorophenol (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

tert-butyl hydroperoxide (ISO)

thioacetamide (EXP)

triacsin C (ISO)

trichloroethene (EXP)

triptonide (ISO)

tungsten (ISO)

tunicamycin (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

fatty acid alpha-oxidation (ISO)

isoleucine biosynthetic process (IBA)

valine biosynthetic process (IBA)

Cellular Component

acetolactate synthase complex (IBA)

endoplasmic reticulum membrane (ISO)

Molecular Function

acetolactate synthase activity (IBA)

flavin adenine dinucleotide binding (IBA)

magnesium ion binding (IEA)

protein binding (ISO)

thiamine pyrophosphate binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19946888	PMID:28289220

Genomics

Comparative Map Data

Ilvbl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	7	11,039,870 - 11,049,924 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	11,039,871 - 11,049,924 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	13,858,794 - 13,868,869 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	15,736,181 - 15,746,256 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	13,614,088 - 13,624,145 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	14,044,586 - 14,054,639 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	14,044,586 - 14,054,639 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	14,201,069 - 14,211,122 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	12,593,095 - 12,603,148 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	12,593,102 - 12,602,948 (-)	NCBI
Celera	7	9,161,349 - 9,171,402 (-)	NCBI		Celera
Cytogenetic Map	7	q11	NCBI

ILVBL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	15,114,987 - 15,125,786 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	15,114,984 - 15,125,786 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	15,225,798 - 15,236,597 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	15,086,785 - 15,097,577 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	15,086,786 - 15,096,968	NCBI
Celera	19	15,121,522 - 15,132,314 (-)	NCBI		Celera
Cytogenetic Map	19	p13.12	NCBI
HuRef	19	14,793,615 - 14,804,441 (-)	NCBI		HuRef
CHM1_1	19	15,225,270 - 15,236,095 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	15,239,931 - 15,250,730 (-)	NCBI		T2T-CHM13v2.0

Ilvbl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	78,410,178 - 78,420,336 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	78,410,180 - 78,420,336 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	78,574,344 - 78,584,502 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	78,574,346 - 78,584,502 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	78,037,245 - 78,047,247 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	77,977,671 - 77,987,622 (+)	NCBI		MGSCv36	mm8
Celera	10	79,596,716 - 79,606,718 (+)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI
cM Map	10	39.72	NCBI

Ilvbl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	8,130,875 - 8,140,146 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955495	8,130,875 - 8,140,152 (+)	NCBI	ChiLan1.0	ChiLan1.0

ILVBL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	19	19,031,470 - 19,042,359 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	14,648,081 - 14,658,879 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	15,632,614 - 15,643,554 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	15,632,614 - 15,643,414 (-)	Ensembl	panpan1.1		panPan2

ILVBL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	47,013,033 - 47,021,511 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	47,012,557 - 47,021,778 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	46,863,113 - 46,872,559 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	47,504,784 - 47,514,232 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	47,504,776 - 47,514,232 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	46,736,880 - 46,746,330 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	47,155,949 - 47,165,396 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	47,427,211 - 47,436,661 (+)	NCBI		UU_Cfam_GSD_1.0

Ilvbl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	205,794,992 - 205,803,665 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936596	5,343,761 - 5,354,264 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936596	5,343,895 - 5,352,804 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ILVBL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	62,435,155 - 62,451,371 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	62,435,368 - 62,447,030 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	61,996,400 - 62,008,051 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ILVBL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	13,717,252 - 13,728,880 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	13,715,767 - 13,728,855 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666074	5,805,040 - 5,816,682 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ilvbl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624901	2,198,272 - 2,206,545 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624901	2,198,000 - 2,207,849 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ilvbl
30 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	166
Count of miRNA genes:	128
Interacting mature miRNAs:	134
Transcripts:	ENSRNOT00000039852
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2298550	Neuinf6	Neuroinflammation QTL 6	3.3		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	7	1	27829089	Rat
7411566	Bw136	Body weight QTL 136	10.4	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	1	31962314	Rat
9590142	Scort5	Serum corticosterone level QTL 5	24.4	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	1	31962314	Rat
724560	Plsm3	Polydactyly-luxate syndrome (PLS) morphotypes QTL 3		0.0003	tibia length (VT:0004357)	tibia length (CMO:0000450)	7	1	34000259	Rat
2317047	Wbc4	White blood cell count QTL 4		0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	7	1	35342956	Rat
61410	Bw19	Body weight QTL 19	6.2	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	44782185	Rat
631503	Bp102	Blood pressure QTL 102	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	1	44822433	Rat
1300176	Hrtrt10	Heart rate QTL 10	3.19		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	7	664270	26029351	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
10755438	Coatc9	Coat color QTL 9		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	3529280	48529280	Rat
9590102	Sffal5	Serum free fatty acids level QTL 5	8.62	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	7	5329019	50329019	Rat
10755440	Coatc10	Coat color QTL 10		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	7496499	52496499	Rat
10059592	Kidm45	Kidney mass QTL 45	3.95	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	7	7573985	52573985	Rat
2298547	Neuinf5	Neuroinflammation QTL 5	3.7		nervous system integrity trait (VT:0010566)	spinal cord Cd74 protein level (CMO:0002131)	7	9462246	58265113	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	9462246	98011544	Rat
1578652	Bmd15	Bone mineral density QTL 15	5.2		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	7	9866467	60460686	Rat

Markers in Region

RH129156

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	11,039,651 - 11,039,834 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	14,044,367 - 14,044,549	NCBI	Rnor6.0
Rnor_5.0	7	14,200,850 - 14,201,032	UniSTS	Rnor5.0
RGSC_v3.4	7	12,592,876 - 12,593,058	UniSTS	RGSC3.4
Celera	7	9,161,130 - 9,161,312	UniSTS
RH 3.4 Map	7	66.4	UniSTS
Cytogenetic Map	7	q11	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	9	44	33	9	33			56	33	35	11
Low		34	13	8	10	8	8	11	18	2	6		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000039852 ⟹ ENSRNOP00000036958

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	11,039,871 - 11,049,924 (-)	Ensembl
Rnor_6.0 Ensembl	7	14,044,586 - 14,054,639 (-)	Ensembl

RefSeq Acc Id:

NM_001108738 ⟹ NP_001102208

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	11,039,871 - 11,049,924 (-)	NCBI
Rnor_6.0	7	14,044,586 - 14,054,639 (-)	NCBI
Rnor_5.0	7	14,201,069 - 14,211,122 (-)	NCBI
RGSC_v3.4	7	12,593,095 - 12,603,148 (-)	RGD
Celera	7	9,161,349 - 9,171,402 (-)	RGD

Sequence:

show sequence

GTGTAGTGTTAGCCAATTAGAGGGAGGGGAGAGAAGCGACCAATGATAAACGGCTCTTGCGGGT
AGCTTTTTCAGCAAGACTCCAGTTTGGCGCAGGCGCGTCACGCTGGACTACGGGGCGCTGCAGA
GCCAAGTGGGCAAAAGGGGCACCACCGCACACTACCGAGTCATGTGACCCAGAAGCGGCCGAGT
TCCTCTGCAGTCAGGGACCTTTCCTATAGGCAAGGTCATAGGGCCTTGTTTCGGGGGGTGGGTG
GAAGGGAGGTCTATGTAGTGGGGTTGAAGGAGCATCCTATTGCAATGTGACCTCGGCCGGAGGC
CAAAGGTCAAGAGTCCGGTTGGGGGGCGTGCCCTAGGCTGCGCAACCCGATGGGGGCGTGGCCT
TGCGACTCAATGATGTTAGCGCGGGGCGGGCTCTCTGCTGAGGTCGAGTCCTGTGTTGAGGAGG
GTGGGTTCCCCGTGGGTTCCCTAATAAATAGGTTCTTCCTCATGGAAACTACTGCGGCCGCTGC
ATCTGCCGGGGGCTTCTTCCCCTCGTTCCTGCTCCTGGCGTTTGGGACACTGGTGGCTGCCGTG
CTGGGCGCCGCTCACAGACTGGGGCTCTTCTATCAGCTGATGCACAAGGTGGACAAGACAAGCA
TCCGGCATGGCGGAGAGAGTGTGGCAGCTGTGCTCCGAGCCCACGGCGTACGCTTTGTCTTCAC
GTTGGTCGGTGGGCACATTTCCCCACTGCTGGTGGCCTGTGAGAAGCTGGGCATCCGAGTGGTA
GACACACGCCATGAGGTCACTGCTGTCTTTGCTGCTGATGCTGTGGCCCGCTTGACTGGGACAG
TGGGCGTGGCAGCAGTGACAGCCGGTCCTGGCCTCACCAACACCGTGACTGCAGTGAAGAATGC
CCAAGTGGCACAGTCCCCAGTCCTGCTTCTGGGTGGGGCTGCCAGCACCCTGCTGCAGAAACGG
GGCGCGCTCCAGGCCATTGATCAGATGTCTCTGTTCAGGCCACTCTGCAAATTCTGTGCGTCTG
TGCGAAGGGTACGGGACATTGTACCTACCCTGAGGGCTGCAATGGCTGCCGCCCAATCGGGCAC
CCCAGGCCCGGTGTTTGTGGAGCTGCCTCTTGATGTGCTGTATCCCTACTTCATGGTTGAGAAG
GAGATGATACCAGCCCAGCTGCCCAAGGGCCTCATGGGTCGAGTGGTTGTCTGGTACTTACAGA
ACTGCCTGGCCAACCTCTTTGCTGGGGCTTGGGAGCCTCGTCCCGAGGGACCTCTGCCCTTGGA
CATTCCCCAGGCGTCTCCCCAGCAGGTCCAACGCTGTGTGGAGATCCTGAGCCGGGCCAAGAGG
CCTCTGCTGGTGCTGGGGAGCCAGGCCCTGCTACCCCCAACCCCCGCCAACAAGCTTAGGGCTG
CTGTGGAGACCCTGGGTGTCCCCTGCTTCCTCGGGGGGATGTCTCGGGGCCTGCTGGGCCGCAA
CCACCCTCTCCACATCCGGCAGAACCGCAGCGCTGCCCTGAAGAAAGCAGATGTTGTTGTCCTG
GCGGGTGCTGTGTGCGATTTCCGCCTGTCTTATGGTCGCGTCCTCAACCGCAAGAGCAGCATCA
TCATTGTCAACCGGAACCGGGATGATATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGA
GGCTGTGCAGGGAGATGTGGGCTCCTTCATGATCAAACTGGTGGAAGGCCTGCAGGGCCAGACG
TGGTCCTCAGACTGGGTTGAGGAGCTTCGGAAAGCCGACCAGCAGAAGGAGCAGACTTACCGGG
ATAAGGCTTTGTTGCCTGTACCTCAGCACCTGAACCCAGTACGGCTGTTACAGCAGGTGGAGGA
AACTCTGCCTGACAACGCGCTTCTTGTGGTTGACGGCGGGGACTTCGTTGCCACTGCTGCCTAC
TTAGTACAGCCCAGAGGGCCCCTGCGCTGGCTCGACCCTGGGGCCTTTGGGACTCTGGGAGTTG
GCGCAGGTTTTGCACTTGGGGCCAAGCTGTGTCAGCCCGAGGCCGAGGTTTGGTGCCTGTTTGG
GGATGGAGCCTTTGGCTACAGCCTCATTGAGTTCGACACGTTCGTCAGACATAAGGTACCGGTG
ATAGCCTTGGTAGGGAACGATGCAGGTTGGACCCAGATTTCTCGGGAGCAGGTGCCCAGGTTGG
GCAGTGATGTGGCCTGTAGCCTGGCTTACACCGATTATCACAAGGCAGCCATGGGCCTGGGGGC
CCAGGGATTGATACTCTCACGGGACAACGAGGATCAAGTGGTCAAGGTACTTCGTGATGGCCAG
AAGCTGTGCCAGGAGGGCCATGCTGTCGTGGTCAACATCCTGATCGGGAGGACAGATTTCAGAG
ATGGCTCCATTTCTGTATAGGGATTATACAGGGTTCGTGTGCGTGCCTCTTTGTACCTGGACTT
CGCGTAGCCTACCCGGGGTTTTCATCCTCGCCTGTTCCGAGCTGGTCCGACGAGGTCAAACAAG
TGGGGAATGGGAGGACCAAAGCTCAAAGAGGCACCTTGGCAACCCCGGTAGCTCTTTCCACAGG
CCCAGCTTGTACCCTTTCTCTCTTCTAAAATTAAATCTCTTGGCTATATGAGCCCAAGGACTCA
GTCACAGC

hide sequence

RefSeq Acc Id:

XM_006241070 ⟹ XP_006241132

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	11,039,870 - 11,049,835 (-)	NCBI
Rnor_6.0	7	14,044,588 - 14,054,500 (-)	NCBI
Rnor_5.0	7	14,201,069 - 14,211,122 (-)	NCBI

Sequence:

show sequence

AAAAGGGGCACCACCGCACACTACCGAGTCATGTGACCCAGAAGCGGCCGAGTTCCTCTGCAGT
CAGGGACCTTTCCTATAGGCAAGGTTCTTCCTCATGGAAACTACTGCGGCCGCTGCATCTGCCG
GGGGCTTCTTCCCCTCGTTCCTGCTCCTGGCGTTTGGGACACTGGTGGCTGCCGTGCTGGGCGC
CGCTCACAGACTGGGGCTCTTCTATCAGCTGATGCACAAGGTGGACAAGACAAGCATCCGGCAT
GGCGGAGAGAGTGTGGCAGCTGTGCTCCGAGCCCACGGCGTACGCTTTGTCTTCACGTTGGTCG
GTGGGCACATTTCCCCACTGCTGGTGGCCTGTGAGAAGCTGGGCATCCGAGTGGTAGACACACG
CCATGAGGTCACTGCTGTCTTTGCTGCTGATGCTGTGGCCCGCTTGACTGGGACAGTGGGCGTG
GCAGCAGTGACAGCCGGTCCTGGCCTCACCAACACCGTGACTGCAGTGAAGAATGCCCAAGTGG
CACAGTCCCCAGTCCTGCTTCTGGGTGGGGCTGCCAGCACCCTGCTGCAGAAACGGGGCGCGCT
CCAGGCCATTGATCAGATGTCTCTGTTCAGGCCACTCTGCAAATTCTGTGCGTCTGTGCGAAGG
GTACGGGACATTGTACCTACCCTGAGGGCTGCAATGGCTGCCGCCCAATCGGGCACCCCAGGCC
CGGTGTTTGTGGAGCTGCCTCTTGATGTGCTGTATCCCTACTTCATGGTTGAGAAGGAGATGAT
ACCAGCCCAGCTGCCCAAGGGCCTCATGGGTCGAGTGGTTGTCTGGTACTTACAGAACTGCCTG
GCCAACCTCTTTGCTGGGGCTTGGGAGCCTCGTCCCGAGGGACCTCTGCCCTTGGACATTCCCC
AGGCGTCTCCCCAGCAGGTCCAACGCTGTGTGGAGATCCTGAGCCGGGCCAAGAGGCCTCTGCT
GGTGCTGGGGAGCCAGGCCCTGCTACCCCCAACCCCCGCCAACAAGCTTAGGGCTGCTGTGGAG
ACCCTGGGTGTCCCCTGCTTCCTCGGGGGGATGTCTCGGGGCCTGCTGGGCCGCAACCACCCTC
TCCACATCCGGCAGAACCGCAGCGCTGCCCTGAAGAAAGCAGATGTTGTTGTCCTGGCGGGTGC
TGTGTGCGATTTCCGCCTGTCTTATGGTCGCGTCCTCAACCGCAAGAGCAGCATCATCATTGTC
AACCGGAACCGGGATGATATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGC
AGGGAGATGTGGGCTCCTTCATGATCAAACTGGTGGAAGGCCTGCAGGGCCAGACGTGGTCCTC
AGACTGGGTTGAGGAGCTTCGGAAAGCCGACCAGCAGAAGGAGCAGACTTACCGGGATAAGGCT
TTGTTGCCTGTACCTCAGCACCTGAACCCAGTACGGCTGTTACAGCAGGTGGAGGAAACTCTGC
CTGACAACGCGCTTCTTGTGGTTGACGGCGGGGACTTCGTTGCCACTGCTGCCTACTTAGTACA
GCCCAGAGGGCCCCTGCGCTGGCTCGACCCTGGGGCCTTTGGGACTCTGGGAGTTGGCGCAGGT
TTTGCACTTGGGGCCAAGCTGTGTCAGCCCGAGGCCGAGGTTTGGTGCCTGTTTGGGGATGGAG
CCTTTGGCTACAGCCTCATTGAGTTCGACACGTTCGTCAGACATAAGGTACCGGTGATAGCCTT
GGTAGGGAACGATGCAGGTTGGACCCAGATTTCTCGGGAGCAGGTGCCCAGGTTGGGCAGTGAT
GTGGCCTGTAGCCTGGCTTACACCGATTATCACAAGGCAGCCATGGGCCTGGGGGCCCAGGGAT
TGATACTCTCACGGGACAACGAGGATCAAGTGGTCAAGGTACTTCGTGATGGCCAGAAGCTGTG
CCAGGAGGGCCATGCTGTCGTGGTCAACATCCTGATCGGGAGGACAGATTTCAGAGATGGCTCC
ATTTCTGTATAGGGATTATACAGGGTTCGTGTGCGTGCCTCTTTGTACCTGGACTTCGCGTAGC
CTACCCGGGGTTTTCATCCTCGCCTGTTCCGAGCTGGTCCGACGAGGTCAAACAAGTGGGGAAT
GGGAGGACCAAAGCTCAAAGAGGCACCTTGGCAACCCCGGTAGCTCTTTCCACAGGCCCAGCTT
GTACCCTTTCTCTCTTCTAAAATTAAATCTCTTGGCTATATGAGCCCAAGGACTCAGTCACA

hide sequence

RefSeq Acc Id:

XM_006241071 ⟹ XP_006241133

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	11,039,870 - 11,049,832 (-)	NCBI
Rnor_6.0	7	14,044,588 - 14,054,500 (-)	NCBI
Rnor_5.0	7	14,201,069 - 14,211,122 (-)	NCBI

Sequence:

show sequence

AAAAGGGGCACCACCGCACACTACCGAGTCATGTGACCCAGAAGCGGCCGAGTTCCTCTGCAGT
CAGGGACCTTTCCTATAGGTTCTTCCTCATGGAAACTACTGCGGCCGCTGCATCTGCCGGGGGC
TTCTTCCCCTCGTTCCTGCTCCTGGCGTTTGGGACACTGGTGGCTGCCGTGCTGGGCGCCGCTC
ACAGACTGGGGCTCTTCTATCAGCTGATGCACAAGGTGGACAAGACAAGCATCCGGCATGGCGG
AGAGAGTGTGGCAGCTGTGCTCCGAGCCCACGGCGTACGCTTTGTCTTCACGTTGGTCGGTGGG
CACATTTCCCCACTGCTGGTGGCCTGTGAGAAGCTGGGCATCCGAGTGGTAGACACACGCCATG
AGGTCACTGCTGTCTTTGCTGCTGATGCTGTGGCCCGCTTGACTGGGACAGTGGGCGTGGCAGC
AGTGACAGCCGGTCCTGGCCTCACCAACACCGTGACTGCAGTGAAGAATGCCCAAGTGGCACAG
TCCCCAGTCCTGCTTCTGGGTGGGGCTGCCAGCACCCTGCTGCAGAAACGGGGCGCGCTCCAGG
CCATTGATCAGATGTCTCTGTTCAGGCCACTCTGCAAATTCTGTGCGTCTGTGCGAAGGGTACG
GGACATTGTACCTACCCTGAGGGCTGCAATGGCTGCCGCCCAATCGGGCACCCCAGGCCCGGTG
TTTGTGGAGCTGCCTCTTGATGTGCTGTATCCCTACTTCATGGTTGAGAAGGAGATGATACCAG
CCCAGCTGCCCAAGGGCCTCATGGGTCGAGTGGTTGTCTGGTACTTACAGAACTGCCTGGCCAA
CCTCTTTGCTGGGGCTTGGGAGCCTCGTCCCGAGGGACCTCTGCCCTTGGACATTCCCCAGGCG
TCTCCCCAGCAGGTCCAACGCTGTGTGGAGATCCTGAGCCGGGCCAAGAGGCCTCTGCTGGTGC
TGGGGAGCCAGGCCCTGCTACCCCCAACCCCCGCCAACAAGCTTAGGGCTGCTGTGGAGACCCT
GGGTGTCCCCTGCTTCCTCGGGGGGATGTCTCGGGGCCTGCTGGGCCGCAACCACCCTCTCCAC
ATCCGGCAGAACCGCAGCGCTGCCCTGAAGAAAGCAGATGTTGTTGTCCTGGCGGGTGCTGTGT
GCGATTTCCGCCTGTCTTATGGTCGCGTCCTCAACCGCAAGAGCAGCATCATCATTGTCAACCG
GAACCGGGATGATATGTTGCTCAACTCAGACATCTTCTGGAAGCCCCAGGAGGCTGTGCAGGGA
GATGTGGGCTCCTTCATGATCAAACTGGTGGAAGGCCTGCAGGGCCAGACGTGGTCCTCAGACT
GGGTTGAGGAGCTTCGGAAAGCCGACCAGCAGAAGGAGCAGACTTACCGGGATAAGGCTTTGTT
GCCTGTACCTCAGCACCTGAACCCAGTACGGCTGTTACAGCAGGTGGAGGAAACTCTGCCTGAC
AACGCGCTTCTTGTGGTTGACGGCGGGGACTTCGTTGCCACTGCTGCCTACTTAGTACAGCCCA
GAGGGCCCCTGCGCTGGCTCGACCCTGGGGCCTTTGGGACTCTGGGAGTTGGCGCAGGTTTTGC
ACTTGGGGCCAAGCTGTGTCAGCCCGAGGCCGAGGTTTGGTGCCTGTTTGGGGATGGAGCCTTT
GGCTACAGCCTCATTGAGTTCGACACGTTCGTCAGACATAAGGTACCGGTGATAGCCTTGGTAG
GGAACGATGCAGGTTGGACCCAGATTTCTCGGGAGCAGGTGCCCAGGTTGGGCAGTGATGTGGC
CTGTAGCCTGGCTTACACCGATTATCACAAGGCAGCCATGGGCCTGGGGGCCCAGGGATTGATA
CTCTCACGGGACAACGAGGATCAAGTGGTCAAGGTACTTCGTGATGGCCAGAAGCTGTGCCAGG
AGGGCCATGCTGTCGTGGTCAACATCCTGATCGGGAGGACAGATTTCAGAGATGGCTCCATTTC
TGTATAGGGATTATACAGGGTTCGTGTGCGTGCCTCTTTGTACCTGGACTTCGCGTAGCCTACC
CGGGGTTTTCATCCTCGCCTGTTCCGAGCTGGTCCGACGAGGTCAAACAAGTGGGGAATGGGAG
GACCAAAGCTCAAAGAGGCACCTTGGCAACCCCGGTAGCTCTTTCCACAGGCCCAGCTTGTACC
CTTTCTCTCTTCTAAAATTAAATCTCTTGGCTATATGAGCCCAAGGACTCAGTCACA

hide sequence

RefSeq Acc Id:

XM_039079414 ⟹ XP_038935342

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	11,039,873 - 11,047,236 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102208	(Get FASTA)	NCBI Sequence Viewer
	XP_006241132	(Get FASTA)	NCBI Sequence Viewer
	XP_006241133	(Get FASTA)	NCBI Sequence Viewer
	XP_038935342	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL89450	(Get FASTA)	NCBI Sequence Viewer
	EDL89451	(Get FASTA)	NCBI Sequence Viewer
	EDL89452	(Get FASTA)	NCBI Sequence Viewer
	EDL89453	(Get FASTA)	NCBI Sequence Viewer
	EDL89454	(Get FASTA)	NCBI Sequence Viewer
	EDL89455	(Get FASTA)	NCBI Sequence Viewer
	EDL89456	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000036958
	ENSRNOP00000036958.4

RefSeq Acc Id:

NP_001102208 ⟸ NM_001108738

- UniProtKB:

D4ACG2 (UniProtKB/TrEMBL), A6K931 (UniProtKB/TrEMBL), A6K936 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGAWPCDSMMLARGGLSAEVESCVEEGGFPVGSLINRFFLMETTAAAASAGGFFPSFLLLAFGT
LVAAVLGAAHRLGLFYQLMHKVDKTSIRHGGESVAAVLRAHGVRFVFTLVGGHISPLLVACEKL
GIRVVDTRHEVTAVFAADAVARLTGTVGVAAVTAGPGLTNTVTAVKNAQVAQSPVLLLGGAAST
LLQKRGALQAIDQMSLFRPLCKFCASVRRVRDIVPTLRAAMAAAQSGTPGPVFVELPLDVLYPY
FMVEKEMIPAQLPKGLMGRVVVWYLQNCLANLFAGAWEPRPEGPLPLDIPQASPQQVQRCVEIL
SRAKRPLLVLGSQALLPPTPANKLRAAVETLGVPCFLGGMSRGLLGRNHPLHIRQNRSAALKKA
DVVVLAGAVCDFRLSYGRVLNRKSSIIIVNRNRDDMLLNSDIFWKPQEAVQGDVGSFMIKLVEG
LQGQTWSSDWVEELRKADQQKEQTYRDKALLPVPQHLNPVRLLQQVEETLPDNALLVVDGGDFV
ATAAYLVQPRGPLRWLDPGAFGTLGVGAGFALGAKLCQPEAEVWCLFGDGAFGYSLIEFDTFVR
HKVPVIALVGNDAGWTQISREQVPRLGSDVACSLAYTDYHKAAMGLGAQGLILSRDNEDQVVKV
LRDGQKLCQEGHAVVVNILIGRTDFRDGSISV

hide sequence

RefSeq Acc Id:	XP_006241133 ⟸ XM_006241071
- Peptide Label:	isoform X1
- UniProtKB:	A6K934 (UniProtKB/TrEMBL), A6K936 (UniProtKB/TrEMBL)
- Sequence:	show sequence METTAAAASAGGFFPSFLLLAFGTLVAAVLGAAHRLGLFYQLMHKVDKTSIRHGGESVAAVLRA HGVRFVFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAVARLTGTVGVAAVTAGPGLTN TVTAVKNAQVAQSPVLLLGGAASTLLQKRGALQAIDQMSLFRPLCKFCASVRRVRDIVPTLRAA MAAAQSGTPGPVFVELPLDVLYPYFMVEKEMIPAQLPKGLMGRVVVWYLQNCLANLFAGAWEPR PEGPLPLDIPQASPQQVQRCVEILSRAKRPLLVLGSQALLPPTPANKLRAAVETLGVPCFLGGM SRGLLGRNHPLHIRQNRSAALKKADVVVLAGAVCDFRLSYGRVLNRKSSIIIVNRNRDDMLLNS DIFWKPQEAVQGDVGSFMIKLVEGLQGQTWSSDWVEELRKADQQKEQTYRDKALLPVPQHLNPV RLLQQVEETLPDNALLVVDGGDFVATAAYLVQPRGPLRWLDPGAFGTLGVGAGFALGAKLCQPE AEVWCLFGDGAFGYSLIEFDTFVRHKVPVIALVGNDAGWTQISREQVPRLGSDVACSLAYTDYH KAAMGLGAQGLILSRDNEDQVVKVLRDGQKLCQEGHAVVVNILIGRTDFRDGSISV hide sequence

RefSeq Acc Id:	XP_006241132 ⟸ XM_006241070
- Peptide Label:	isoform X1
- UniProtKB:	A6K934 (UniProtKB/TrEMBL), A6K936 (UniProtKB/TrEMBL)
- Sequence:	show sequence METTAAAASAGGFFPSFLLLAFGTLVAAVLGAAHRLGLFYQLMHKVDKTSIRHGGESVAAVLRA HGVRFVFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFAADAVARLTGTVGVAAVTAGPGLTN TVTAVKNAQVAQSPVLLLGGAASTLLQKRGALQAIDQMSLFRPLCKFCASVRRVRDIVPTLRAA MAAAQSGTPGPVFVELPLDVLYPYFMVEKEMIPAQLPKGLMGRVVVWYLQNCLANLFAGAWEPR PEGPLPLDIPQASPQQVQRCVEILSRAKRPLLVLGSQALLPPTPANKLRAAVETLGVPCFLGGM SRGLLGRNHPLHIRQNRSAALKKADVVVLAGAVCDFRLSYGRVLNRKSSIIIVNRNRDDMLLNS DIFWKPQEAVQGDVGSFMIKLVEGLQGQTWSSDWVEELRKADQQKEQTYRDKALLPVPQHLNPV RLLQQVEETLPDNALLVVDGGDFVATAAYLVQPRGPLRWLDPGAFGTLGVGAGFALGAKLCQPE AEVWCLFGDGAFGYSLIEFDTFVRHKVPVIALVGNDAGWTQISREQVPRLGSDVACSLAYTDYH KAAMGLGAQGLILSRDNEDQVVKVLRDGQKLCQEGHAVVVNILIGRTDFRDGSISV hide sequence

RefSeq Acc Id:

ENSRNOP00000036958 ⟸ ENSRNOT00000039852

RefSeq Acc Id:	XP_038935342 ⟸ XM_039079414
- Peptide Label:	isoform X2

Protein Domains

Thiamine pyrophosphate enzyme central Thiamine pyrophosphate enzyme N-terminal TPP- Thiamine pyrophosphate enzyme TPP-binding

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4ACG2-F1-model_v2	AlphaFold	D4ACG2	1-672	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307988	AgrOrtholog
BioCyc Gene	G2FUF-34837	BioCyc
BioCyc Pathway	PWY66-387 [3-methyl-branched fatty acid alpha-oxidation]	BioCyc
	PWY66-388 [ceramide degradation by alpha-oxidation]	BioCyc
Ensembl Genes	ENSRNOG00000028512	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000039852	ENTREZGENE
	ENSRNOT00000039852.5	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.970	UniProtKB/TrEMBL
	TPP-binding domain	UniProtKB/TrEMBL
InterPro	DHS-like_NAD/FAD-binding_dom	UniProtKB/TrEMBL
	THDP-binding	UniProtKB/TrEMBL
	Thiamin_PyroP_enz_cen_dom	UniProtKB/TrEMBL
	Thiamin_PyroP_enz_TPP-bd_dom	UniProtKB/TrEMBL
	TPP-bd_CS	UniProtKB/TrEMBL
	TPP_enz	UniProtKB/TrEMBL
	TPP_enzyme-bd_C	UniProtKB/TrEMBL
KEGG Report	rno:362843	UniProtKB/TrEMBL
NCBI Gene	362843	ENTREZGENE
PANTHER	2-HYDROXYACYL-COA LYASE 2	UniProtKB/TrEMBL
	PTHR18968	UniProtKB/TrEMBL
Pfam	TPP_enzyme_C	UniProtKB/TrEMBL
	TPP_enzyme_M	UniProtKB/TrEMBL
	TPP_enzyme_N	UniProtKB/TrEMBL
PhenoGen	Ilvbl	PhenoGen
PROSITE	TPP_ENZYMES	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000028512	RatGTEx
Superfamily-SCOP	SSF52467	UniProtKB/TrEMBL
	SSF52518	UniProtKB/TrEMBL
UniProt	A6K931	ENTREZGENE, UniProtKB/TrEMBL
	A6K934	ENTREZGENE, UniProtKB/TrEMBL
	A6K936	ENTREZGENE, UniProtKB/TrEMBL
	D4ACG2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-06-29	Ilvbl	ilvB acetolactate synthase like	Ilvbl	ilvB (bacterial acetolactate synthase)-like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Ilvbl	ilvB (bacterial acetolactate synthase)-like	Ilvbl_predicted	ilvB (bacterial acetolactate synthase)-like (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Ilvbl_predicted	ilvB (bacterial acetolactate synthase)-like (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar