Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of tumor necrosis factor production
go back to main search page
Accession:GO:0032760 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of tumor necrosis factor production.
Comment:Note that this term refers only to the specific, original 'tumor necrosis factor' protein (TNF) and not other members of the tumor necrosis factor superfamily (those with the gene symbol root 'TNFSF').
Synonyms:exact_synonym: positive regulation of TNF production;   positive regulation of TNF-alpha production;   positive regulation of tumor necrosis factor-alpha production;   up regulation of tumor necrosis factor production;   upregulation of tumor necrosis factor production
 narrow_synonym: activation of tumor necrosis factor production;   positive regulation of TNF secretion;   positive regulation of cachectin secretion;   positive regulation of tumor necrosis factor biosynthesis;   positive regulation of tumor necrosis factor biosynthetic process;   positive regulation of tumor necrosis factor formation;   positive regulation of tumor necrosis factor secretion;   stimulation of tumor necrosis factor production
 alt_id: GO:0042535;   GO:1904469

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
positive regulation of tumor necrosis factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISO RGD PMID:18854840 RGD:2325137 NCBI chrNW_004936528:1,608,782...1,682,873
Ensembl chrNW_004936528:1,608,757...1,682,975 		JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:12777399) BHF-UCL PMID:12777399 NCBI chrNW_004936532:5,864,851...5,904,005
Ensembl chrNW_004936532:5,864,867...5,904,003 		JBrowse link
G Ager advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,418,342...1,422,005
Ensembl chrNW_004936727:1,418,799...1,422,147 		JBrowse link
G Akap12 A-kinase anchoring protein 12 ISO RGD PMID:17873284 PMID:19937403 RGD:14348968 RGD:14348969 NCBI chrNW_004936489:4,237,466...4,258,408
Ensembl chrNW_004936489:4,237,439...4,261,141 		JBrowse link
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Arfgef2 ADP ribosylation factor guanine nucleotide exchange factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:5,172,752...5,262,823
Ensembl chrNW_004936514:5,172,584...5,262,836 		JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,213,323...5,230,861
Ensembl chrNW_004936580:5,214,401...5,245,021 		JBrowse link
G Arid5a AT-rich interaction domain 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936744:539,150...545,021
Ensembl chrNW_004936744:537,168...546,017 		JBrowse link
G Btk Bruton tyrosine kinase ISO RGD PMID:28352114 RGD:151665126 NCBI chrNW_004936813:429,400...467,481
Ensembl chrNW_004936813:429,224...463,441 		JBrowse link
G C1qtnf4 C1q and TNF related 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,659,171...1,663,154
Ensembl chrNW_004936562:1,659,164...1,664,183 		JBrowse link
G Card9 caspase recruitment domain family member 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17187069) Ensembl
MGI		 PMID:17187069 GO_REF:0000107 NCBI chrNW_004936669:1,428,208...1,438,012
Ensembl chrNW_004936669:1,429,594...1,438,005 		JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (MGI:3576832|PMID:15845453) BHF-UCL PMID:15845453 MGI:3576832 NCBI chrNW_004936524:2,765,271...2,767,259
Ensembl chrNW_004936524:2,765,267...2,767,385 		JBrowse link
G Ccn1 cellular communication network factor 1 ISO RGD PMID:27653023 RGD:150429754 NCBI chrNW_004936608:152,174...155,123
Ensembl chrNW_004936608:151,838...155,358 		JBrowse link
G Cd14 CD14 molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12594207) MGI
Ensembl		 PMID:12594207 GO_REF:0000107 NCBI chrNW_004936531:9,572,392...9,575,771
Ensembl chrNW_004936531:9,571,796...9,575,923 		JBrowse link
G Cd2 CD2 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936627:1,902,120...1,915,257
Ensembl chrNW_004936627:1,902,120...1,915,257 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16061696)
(PMID:15690042)		 Ensembl
MGI		 PMID:15690042 PMID:16061696 GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Cd84 CD84 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936740:111,296...133,847
Ensembl chrNW_004936740:123,885...134,097 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in
acts_upstream_of_or_within		 ISO (PMID:19358895)
(PMID:12719478), (PMID:14707091)
(MGI:3844414|PMID:19136564)		 ARUK-UCL
MGI		 PMID:12719478 PMID:14707091 PMID:19136564 PMID:19358895 MGI:3844414 NCBI chrNW_004936902:436,224...446,435 JBrowse link
G Clu clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:499,745...513,515
Ensembl chrNW_004936675:499,199...513,836 		JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO RGD PMID:18434589 RGD:151665814 NCBI chrNW_004936504:4,898,947...4,927,195
Ensembl chrNW_004936504:4,898,945...4,928,923 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:6,896,487...6,934,938
Ensembl chrNW_004936481:6,896,359...6,935,623 		JBrowse link
G Ephb2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106 		JBrowse link
G Fadd Fas associated via death domain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:633,501...639,412
Ensembl chrNW_004936599:633,330...639,456 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig acts_upstream_of_or_within ISO (PMID:10229794)
(PMID:14764707)		 MGI PMID:10229794 PMID:14764707 NCBI chrNW_004936903:514,278...517,975
Ensembl chrNW_004936903:514,761...517,948 		JBrowse link
G Frmd8 FERM domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,019,651...4,033,352
Ensembl chrNW_004936599:4,014,355...4,032,866 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936631:3,909,046...3,915,939
Ensembl chrNW_004936631:3,911,693...3,915,560 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:18006747)
(MGI:3763563|PMID:18006747)		 UniProt PMID:18006747 MGI:3763563 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Hdac1 histone deacetylase 1 ISO RGD PMID:22772764 RGD:9590127 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860 		JBrowse link
G Hdac2 histone deacetylase 2 ISO RGD PMID:22772764 RGD:9590127 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:12765338)
(MGI:4367121|PMID:19890330), (MGI:5913663|PMID:19264983)
PMID:10952726		 RGD
UniProt		 PMID:10952726 PMID:12765338 PMID:19264983 PMID:19890330 PMID:22514737 MGI:4367121 MGI:5913663 RGD:10054071 RGD:10402175 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G Hspb1 heat shock protein family B (small) member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,110,351...2,111,896
Ensembl chrNW_004936543:2,110,304...2,112,186 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 ISO RGD PMID:23447644 RGD:10402845 NCBI chrNW_004936506:1,678,069...1,687,632 JBrowse link
G Ifih1 interferon induced with helicase C domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:16,721,306...16,778,249
Ensembl chrNW_004936469:16,721,677...16,774,903 		JBrowse link
G Ifng interferon gamma involved_in ISO (MGI:4942276|PMID:2502420), (MGI:4943415|PMID:1845803), (MGI:6304699|PMID:29061364)
(MGI:5776417|PMID:26227742)
(MGI:6305053|PMID:7715705)
(MGI:3697769|PMID:17255335)		 BHF-UCL
ARUK-UCL		 PMID:1845803 PMID:2502420 PMID:7715705 PMID:17255335 PMID:26227742 More... MGI:3697769 MGI:4942276 MGI:4943415 MGI:5776417 MGI:6304699 MGI:6305053 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452 		JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in ISO (MGI:3697769|PMID:17255335) ARUK-UCL PMID:17255335 MGI:3697769 NCBI chrNW_004936560:4,519,858...4,545,763
Ensembl chrNW_004936560:4,519,474...4,545,796 		JBrowse link
G Il12b interleukin 12B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:4,056,214...4,066,121
Ensembl chrNW_004936515:4,056,214...4,065,076 		JBrowse link
G Il17a interleukin 17A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:29734196) ARUK-UCL
Ensembl		 PMID:29734196 GO_REF:0000107 NCBI chrNW_004936476:8,621,860...8,625,008
Ensembl chrNW_004936476:8,621,860...8,625,008 		JBrowse link
G Il18 interleukin 18 ISO RGD PMID:17623049 RGD:4889480 NCBI chrNW_004936612:2,306,963...2,325,086
Ensembl chrNW_004936612:2,306,875...2,325,189 		JBrowse link
G Il1a interleukin 1 alpha acts_upstream_of ISO PMID:31172560 ARUK-UCL PMID:31172560 RGD:15023467 NCBI chrNW_004936783:1,210,715...1,218,315
Ensembl chrNW_004936783:1,210,809...1,218,315 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:743,630...745,998
Ensembl chrNW_004936646:743,688...745,836 		JBrowse link
G Il33 interleukin 33 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6414704|PMID:26936882) ARUK-UCL
Ensembl		 PMID:26936882 GO_REF:0000107 MGI:6414704 NCBI chrNW_004936539:763,755...791,461
Ensembl chrNW_004936539:623,248...791,470 		JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:31886314) ARUK-UCL PMID:31886314 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:15,805,259...15,817,854
Ensembl chrNW_004936480:15,805,247...15,817,854 		JBrowse link
G Jak2 Janus kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:111,722...243,627
Ensembl chrNW_004936503:110,963...241,867 		JBrowse link
G Lbp lipopolysaccharide binding protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12594207)
(PMID:12055258)		 MGI
Ensembl		 PMID:12055258 PMID:12594207 GO_REF:0000107 NCBI chrNW_004936561:3,017,471...3,035,481
Ensembl chrNW_004936561:3,016,926...3,035,552 		JBrowse link
G Lep leptin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:20209097)
(MGI:5645190|PMID:25158758)		 UniProt PMID:20209097 PMID:25158758 MGI:5645190 NCBI chrNW_004936538:4,034,467...4,050,240 JBrowse link
G LOC101955076 low affinity immunoglobulin gamma Fc region receptor III-A involved_in ISO (PMID:10728755) UniProt PMID:10728755 NCBI chrNW_004937131:42,523...49,533 JBrowse link
G LOC101961439 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593 		JBrowse link
G LOC101963449 D-dopachrome decarboxylase involved_in ISO (PMID:21817065) BHF-UCL PMID:21817065 NCBI chrNW_004936619:1,043,006...1,045,054 JBrowse link
G LOC101964770 C-C chemokine receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:285,559...287,198
Ensembl chrNW_004936596:285,559...286,680 		JBrowse link
G LOC101966992 cytochrome b-245 heavy chain ISO RGD PMID:19318376 RGD:11040691 NCBI chrNW_004936502:4,631,750...4,676,686
Ensembl chrNW_004936502:4,635,149...4,676,904 		JBrowse link
G LOC101967032 cytochrome b-245 light chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:1,036,967...1,044,954
Ensembl chrNW_004936641:1,036,967...1,044,991 		JBrowse link
G LOC101968303 C-C motif chemokine 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:405,996...442,754 JBrowse link
G LOC120891307 2'-5'-oligoadenylate synthase 1-like involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936668:2,917,900...2,925,397 JBrowse link
G Lpl lipoprotein lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:4,084,099...4,108,219
Ensembl chrNW_004936555:4,084,099...4,108,365 		JBrowse link
G Lrrfip2 LRR binding FLII interacting protein 2 acts_upstream_of_or_within ISO (PMID:19265123) MGI PMID:19265123 NCBI chrNW_004936473:26,602,373...26,692,507
Ensembl chrNW_004936473:26,602,324...26,692,285 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO RGD PMID:22302802 RGD:13462052 NCBI chrNW_004936607:628,469...761,117
Ensembl chrNW_004936607:626,991...761,123 		JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO (MGI:5645195|PMID:24380872) UniProt PMID:24380872 MGI:5645195 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24020373) Ensembl
MGI		 PMID:24020373 GO_REF:0000107 NCBI chrNW_004936557:5,867,182...5,911,207
Ensembl chrNW_004936557:5,867,211...5,911,213 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:14,842,778...14,859,163
Ensembl chrNW_004936485:14,842,160...14,859,202 		JBrowse link
G Mif macrophage migration inhibitory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:1,207,058...1,208,010
Ensembl chrNW_004936619:1,203,746...1,208,442 		JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,228,950...5,238,948
Ensembl chrNW_004936551:5,228,950...5,238,948 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10607756), (PMID:11067888), (PMID:12719478), (PMID:12872135)
(PMID:12872135)		 Ensembl
MGI		 PMID:10607756 PMID:11067888 PMID:12719478 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17242187) Ensembl
MGI		 PMID:17242187 GO_REF:0000107 NCBI chrNW_004936722:178,866...187,847
Ensembl chrNW_004936722:179,200...187,800 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18261938) RGD
MGI
Ensembl		 PMID:18261938 PMID:22450316 GO_REF:0000107 RGD:9831170 NCBI chrNW_004936478:6,717,354...6,768,293
Ensembl chrNW_004936478:6,715,245...6,768,372 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17187069)
(PMID:18261938)
(PMID:15220916)		 MGI
Ensembl		 PMID:15220916 PMID:17187069 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:2,917,978...2,965,336
Ensembl chrNW_004936668:2,950,124...2,962,572
Ensembl chrNW_004936668:2,950,124...2,962,572 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17242187) Ensembl
MGI		 PMID:17242187 GO_REF:0000107 NCBI chrNW_004936480:1,188,408...1,273,210
Ensembl chrNW_004936480:1,188,183...1,273,537 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Psen1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065 		JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:2545780 RGD:10043183 NCBI chrNW_004936474:12,333,905...12,337,140
Ensembl chrNW_004936474:12,336,071...12,337,099 		JBrowse link
G Pten phosphatase and tensin homolog ISO RGD PMID:30783439 RGD:150527846 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323 		JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:2,602,261...2,687,903
Ensembl chrNW_004936668:2,628,706...2,682,448 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258 		JBrowse link
G Ptprj protein tyrosine phosphatase receptor type J involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,161,764...1,234,800
Ensembl chrNW_004936562:1,165,304...1,211,817 		JBrowse link
G Pycard PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,550,702...13,552,774
Ensembl chrNW_004936501:13,550,679...13,552,805 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:2,152,231...2,222,260
Ensembl chrNW_004936471:2,153,880...2,222,229 		JBrowse link
G Rigi RNA sensor RIG-I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:1,141,840...1,200,638
Ensembl chrNW_004936524:1,140,971...1,200,638 		JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:9,326,307...9,361,943
Ensembl chrNW_004936534:9,325,249...9,361,949 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098), (PMID:18261938) Ensembl
MGI		 PMID:11894098 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16227612) Ensembl
MGI		 PMID:16227612 GO_REF:0000107 NCBI chrNW_004936479:1,752,180...1,765,330
Ensembl chrNW_004936479:1,750,746...1,765,361 		JBrowse link
G Selenok selenoprotein K involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:4,546,186...4,552,764
Ensembl chrNW_004936473:4,545,961...4,552,822 		JBrowse link
G Setd4 SET domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:6,601,811...6,624,991
Ensembl chrNW_004936500:6,610,597...6,625,009 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587 		JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (PMID:10899905) MGI PMID:10899905 NCBI chrNW_004936501:12,773,967...12,776,642 JBrowse link
G Spon2 spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14691481) Ensembl
MGI		 PMID:14691481 GO_REF:0000107 NCBI chrNW_004936477:22,087,450...22,093,677
Ensembl chrNW_004936477:22,087,394...22,093,723 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936780:1,553,605...1,601,036
Ensembl chrNW_004936780:1,553,605...1,598,158 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272 		JBrowse link
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of_or_within ISO (PMID:12872135)
(PMID:12855817)		 MGI PMID:12855817 PMID:12872135 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Tirap TIR domain containing adaptor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15690042) Ensembl
MGI
TreeGrafter		 PMID:15690042 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936572:5,926,193...5,938,621
Ensembl chrNW_004936572:5,924,158...5,938,658 		JBrowse link
G Tlr1 toll like receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:6,582,430...6,591,128
Ensembl chrNW_004936482:6,582,584...6,584,971 		JBrowse link
G Tlr2 toll like receptor 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:4456948|PMID:15356140)
(PMID:10549626), (PMID:11067888), (PMID:12719478), (PMID:16239543)
(PMID:15690042)
(MGI:5307186|PMID:22198949)		 BHF-UCL
MGI
ARUK-UCL		 PMID:10549626 PMID:11067888 PMID:12719478 PMID:15356140 PMID:15690042 More... MGI:4456948 MGI:5307186 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788 		JBrowse link
G Tlr3 toll like receptor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17008311) Ensembl
MGI		 PMID:17008311 GO_REF:0000107 NCBI chrNW_004936554:3,370,766...3,388,125
Ensembl chrNW_004936554:3,369,469...3,385,907 		JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18261938)
(PMID:10549626), (PMID:10607756)
(PMID:10623794)
(PMID:14691481)		 Ensembl
MGI		 PMID:10549626 PMID:10607756 PMID:10623794 PMID:14691481 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Tmem106a transmembrane protein 106A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,832,438...17,843,098
Ensembl chrNW_004936490:17,832,532...17,843,063 		JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO RGD PMID:20967881 RGD:5130945 NCBI chrNW_004936709:1,407,327...1,421,448
Ensembl chrNW_004936709:1,407,278...1,421,921 		JBrowse link
G Tnfrsf8 TNF receptor superfamily member 8 involved_in ISO (PMID:16108830) UniProt PMID:16108830 NCBI chrNW_004936474:814,510...889,851 JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in ISO (MGI:5638298|PMID:25690660) ARUK-UCL PMID:25690660 MGI:5638298 NCBI chrNW_004936570:457,993...460,735
Ensembl chrNW_004936570:458,054...460,579 		JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:1,776,065...2,546,286
Ensembl chrNW_004936536:1,776,081...1,829,837 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15971
    multicellular organismal process 7395
      cytokine production 745
        tumor necrosis factor superfamily cytokine production 180
          tumor necrosis factor production 176
            positive regulation of tumor necrosis factor production 104
Path 2
Term Annotations click to browse term
  biological_process 15971
    biological regulation 11164
      regulation of biological process 10824
        regulation of metabolic process 5605
          regulation of biosynthetic process 4527
            regulation of cellular biosynthetic process 4441
              regulation of macromolecule biosynthetic process 4346
                regulation of gene expression 4234
                  regulation of cytokine production 737
                    regulation of tumor necrosis factor superfamily cytokine production 180
                      regulation of tumor necrosis factor production 176
                        positive regulation of tumor necrosis factor production 104
paths to the root