Cd36 (CD36 molecule) - Rat Genome Database

Name: Cd36
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Cd36 (CD36 molecule) Ictidomys tridecemlineatus

Analyze

Symbol:

Cd36

Name:

CD36 molecule

RGD ID:

12548073

Description:

ENCODES a protein that exhibits amyloid-beta binding (ortholog); high-density lipoprotein particle binding (ortholog); lipid binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alcoholic Fatty Liver (ortholog); allergic contact dermatitis (ortholog); FOUND IN apical part of cell (ortholog); brush border membrane (ortholog); caveola (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

platelet glycoprotein 4

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Dog

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CD36 (CD36 molecule)	NCBI	Ortholog
Mus musculus (house mouse):	Cd36 (CD36 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cd36 (CD36 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cd36 (CD36 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CD36 (CD36 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CD36 (CD36 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CD36 (CD36 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	CD36 (CD36 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cd36 (CD36 molecule)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	62,188,852 - 62,269,004 (+)	NCBI
SpeTri2.0	NW_004936810	791,823 - 838,303 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Lung Injury (ISO)

Alcoholic Fatty Liver (ISO)

allergic contact dermatitis (ISO)

Alzheimer's disease (ISO)

arteriosclerosis (ISO)

atherosclerosis (ISO)

atrial fibrillation (ISO)

blood platelet disease (ISO)

brain ischemia (ISO)

Cardiac Arrhythmias (ISO)

Cardiomegaly (ISO)

cardiomyopathy (ISO)

celiac disease (ISO)

Cerebral Hemorrhage (ISO)

cerebral infarction (ISO)

cerebral malaria (ISO)

chronic myeloid leukemia (ISO)

colitis (ISO)

corneal neovascularization (ISO)

Coronary Disease (ISO)

dermatomyositis (ISO)

diabetes mellitus (ISO)

Diabetic Nephropathies (ISO)

dilated cardiomyopathy (ISO)

endometriosis (ISO)

epilepsy (ISO)

essential thrombocythemia (ISO)

Experimental Diabetes Mellitus (ISO)

Experimental Liver Cirrhosis (ISO)

fatty liver disease (ISO)

glucose intolerance (ISO)

granulomatosis with polyangiitis (ISO)

Hematoma (ISO)

hemolytic-uremic syndrome (ISO)

Hypercholesterolemia (ISO)

hypertension (ISO)

hypertrophic cardiomyopathy (ISO)

inclusion body myositis (ISO)

Inflammation (ISO)

Insulin Resistance (ISO)

Knee Osteoarthritis (ISO)

liver cirrhosis (ISO)

macular degeneration (ISO)

malaria (ISO)

Metabolic Syndrome (ISO)

middle cerebral artery infarction (ISO)

Mycobacterium Infections (ISO)

myeloid neoplasm (ISO)

myocardial infarction (ISO)

Myocardial Ischemia (ISO)

nephrosis (ISO)

non-alcoholic fatty liver disease (ISO)

obesity (ISO)

osteoarthritis (ISO)

pemphigus (ISO)

platelet-type bleeding disorder 10 (ISO)

pleomorphic xanthoastrocytoma (ISO)

polycystic ovary syndrome (ISO)

polycythemia vera (ISO)

primary immunodeficiency disease (ISO)

pulmonary fibrosis (ISO)

pulmonary tuberculosis (ISO)

relapsing-remitting multiple sclerosis (ISO)

Reperfusion Injury (ISO)

Retroperitoneal Fibrosis (ISO)

rheumatic heart disease (ISO)

Sepsis (ISO)

sickle cell anemia (ISO)

silicosis (ISO)

Staphylococcal Infections (ISO)

Tachycardia (ISO)

thrombotic thrombocytopenic purpura (ISO)

type 1 diabetes mellitus (ISO)

type 2 diabetes mellitus (ISO)

visual epilepsy (ISO)

Weight Gain (ISO)

Wounds, Penetrating (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

amyloid fibril formation (ISO)

amyloid-beta clearance by cellular catabolic process (ISO)

apoptotic cell clearance (ISO)

cell surface receptor signaling pathway (ISO)

cell-cell adhesion via plasma-membrane adhesion molecules (ISO)

cellular response to amyloid-beta (ISO)

cellular response to bacterial lipopeptide (ISO)

cellular response to diacyl bacterial lipopeptide (ISO)

cellular response to hydroperoxide (ISO)

cellular response to insulin stimulus (ISO)

cellular response to lipopolysaccharide (ISO)

cellular response to lipoteichoic acid (ISO)

cellular response to low-density lipoprotein particle stimulus (ISO)

cellular response to oxidised low-density lipoprotein particle stimulus (ISO)

cGMP-mediated signaling (ISO)

cholesterol import (ISO)

cholesterol transport (ISO)

defense response to Gram-positive bacterium (ISO)

digestive tract development (ISO)

eating behavior (ISO)

energy homeostasis (ISO)

fatty acid metabolic process (ISO)

fatty acid oxidation (ISO)

fatty acid transport (ISO)

glucose homeostasis (ISO)

intestinal absorption (ISO)

intestinal cholesterol absorption (ISO)

lipid storage (ISO)

lipid transport across blood-brain barrier (ISO)

lipoprotein transport (ISO)

long-chain fatty acid import across plasma membrane (ISO)

long-chain fatty acid import into cell (ISO)

long-chain fatty acid metabolic process (ISO)

long-chain fatty acid transport (ISO)

low-density lipoprotein particle clearance (ISO)

low-density lipoprotein particle mediated signaling (ISO)

maternal placenta development (ISO)

negative regulation of angiogenesis (ISO)

negative regulation of gene expression (ISO)

negative regulation of protein import into nucleus (ISO)

negative regulation of systemic arterial blood pressure (ISO)

negative regulation of transcription by RNA polymerase II (ISO)

nitric oxide mediated signal transduction (ISO)

oxidised low-density lipoprotein particle clearance (ISO)

phagocytosis, recognition (ISO)

plasma lipoprotein particle clearance (ISO)

positive regulation of blood coagulation (ISO)

positive regulation of blood microparticle formation (ISO)

positive regulation of cell death (ISO)

positive regulation of cell-matrix adhesion (ISO)

positive regulation of cholesterol storage (ISO)

positive regulation of cold-induced thermogenesis (ISO)

positive regulation of cytokine production (ISO)

positive regulation of cytosolic calcium ion concentration (ISO)

positive regulation of ERK1 and ERK2 cascade (ISO)

positive regulation of gene expression (ISO)

positive regulation of glycogen biosynthetic process (ISO)

positive regulation of I-kappaB kinase/NF-kappaB signaling (ISO)

positive regulation of interleukin-1 beta production (ISO)

positive regulation of interleukin-12 production (ISO)

positive regulation of interleukin-6 production (ISO)

positive regulation of macrophage cytokine production (ISO)

positive regulation of macrophage derived foam cell differentiation (ISO)

positive regulation of MAPK cascade (ISO)

positive regulation of NF-kappaB transcription factor activity (ISO)

positive regulation of nitric oxide biosynthetic process (ISO)

positive regulation of NLRP3 inflammasome complex assembly (ISO)

positive regulation of peptidyl-tyrosine phosphorylation (ISO)

positive regulation of phagocytosis (ISO)

positive regulation of phagocytosis, engulfment (ISO)

positive regulation of reactive oxygen species biosynthetic process (ISO)

positive regulation of reactive oxygen species metabolic process (ISO)

positive regulation of triglyceride metabolic process (ISO)

positive regulation of tumor necrosis factor production (ISO)

receptor internalization (ISO)

receptor-mediated endocytosis (ISO)

regulation of action potential (ISO)

regulation of protein-containing complex assembly (ISO)

regulation of removal of superoxide radicals (ISO)

regulation of toll-like receptor signaling pathway (ISO)

response to activity (ISO)

response to bacterium (ISO)

response to drug (ISO)

response to estradiol (ISO)

response to fatty acid (ISO)

response to growth hormone (ISO)

response to linoleic acid (ISO)

response to lipid (ISO)

response to mechanical stimulus (ISO)

response to nutrient (ISO)

response to stilbenoid (ISO)

sensory perception of taste (ISO)

short-chain fatty acid transport (ISO)

triglyceride metabolic process (ISO)

triglyceride transport (ISO)

Cellular Component

apical part of cell (ISO)

brush border membrane (ISO)

caveola (ISO)

cell periphery (ISO)

cell surface (ISO)

endoplasmic reticulum (ISO)

external side of plasma membrane (ISO)

Golgi apparatus (ISO)

intracellular membrane-bounded organelle (ISO)

membrane (ISO)

membrane raft (ISO)

mitochondrion (ISO)

plasma membrane (ISO)

protein-containing complex (ISO)

receptor complex (ISO)

sarcolemma (ISO)

Molecular Function

amyloid-beta binding (ISO)

high-density lipoprotein particle binding (ISO)

lipid binding (ISO)

lipoprotein particle binding (ISO)

lipoteichoic acid immune receptor activity (ISO)

long-chain fatty acid transporter activity (ISO)

low-density lipoprotein particle binding (ISO)

low-density lipoprotein particle receptor activity (ISO)

oleate transmembrane transporter activity (ISO)

oleic acid binding (ISO)

oxidised low-density lipoprotein particle receptor activity (ISO)

protein binding (ISO)

protein-containing complex binding (ISO)

scavenger receptor activity (ISO)

short-chain fatty acid transmembrane transporter activity (ISO)

thrombospondin receptor activity (ISO)

Toll-like receptor binding (ISO)

transforming growth factor beta binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

retinol metabolic pathway (ISO)

References

Genomics

Comparative Map Data

Cd36
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	62,188,852 - 62,269,004 (+)	NCBI
SpeTri2.0	NW_004936810	791,823 - 838,303 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CD36
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	7	80,369,575 - 80,679,277 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	7	80,602,207 - 80,679,277 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	7	80,231,523 - 80,308,593 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	80,069,459 - 80,144,262 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	7	79,912,607 - 79,950,974	NCBI
Celera	7	74,932,098 - 75,009,206 (+)	NCBI
Cytogenetic Map	7	q21.11	NCBI
HuRef	7	74,834,319 - 74,911,371 (+)	NCBI		HuRef
CHM1_1	7	80,162,020 - 80,239,042 (+)	NCBI		CHM1_1
CRA_TCAGchr7v2	7	79,562,929 - 79,640,010 (+)	NCBI

Cd36
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	17,986,688 - 18,093,957 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	5	17,986,688 - 18,093,799 (-)	Ensembl
GRCm38	5	17,781,690 - 17,888,959 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	17,781,690 - 17,888,801 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	17,287,508 - 17,394,777 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	5	17,293,840 - 17,347,520 (-)	NCBI			mm8
Celera	5	14,757,802 - 14,864,361 (-)	NCBI		Celera
Cytogenetic Map	5	A3	NCBI
cM Map	5	8.11	NCBI

Cd36
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	4	17,317,343 - 17,410,084 (+)	NCBI
Rnor_6.0 Ensembl	4	14,001,761 - 14,249,749 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	4	14,150,309 - 14,191,498 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	4	14,125,297 - 14,166,434 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	13,534,582 - 13,554,416 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	4	12,880,238 - 12,941,086 (+)	NCBI		Celera
Cytogenetic Map	4	q11	NCBI

Cd36
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	5,003,668 - 5,075,313 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955410	5,003,720 - 5,120,903 (-)	NCBI	ChiLan1.0	ChiLan1.0

CD36
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	7	86,228,856 - 86,305,865 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	86,265,114 - 86,305,865 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	7	72,566,478 - 72,643,517 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

CD36
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	20,299,808 - 20,375,856 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	20,339,050 - 20,372,639 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	20,015,595 - 20,045,069 (+)	NCBI
ROS_Cfam_1.0	18	20,745,564 - 20,821,666 (+)	NCBI
UMICH_Zoey_3.1	18	20,418,233 - 20,447,673 (+)	NCBI
UNSW_CanFamBas_1.0	18	19,970,682 - 20,000,166 (+)	NCBI
UU_Cfam_GSD_1.0	18	20,626,442 - 20,655,919 (+)	NCBI

CD36
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	99,605,181 - 99,782,105 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	99,685,748 - 99,782,296 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	110,037,583 - 110,106,975 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CD36
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	68,214,875 - 68,309,336 (-)	NCBI
ChlSab1.1 Ensembl	21	68,216,201 - 68,268,669 (-)	Ensembl

Cd36
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624739	29,341,620 - 29,441,232 (+)	NCBI

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005340670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013365366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013365367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013365368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013365369	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040291695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040291696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040291697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040291698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

XM_005340670 ⟹ XP_005340727

RefSeq Status:

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	62,236,264 - 62,269,004 (+)	NCBI
SpeTri2.0	NW_004936810	805,556 - 838,303 (+)	NCBI

Sequence:

show sequence

CATATGCTGGTAAGGGTTTCAGGATAGGATTTTTCTGCAGTATGTCATTTGGTCCTATGAAGAA
CTGTCTGTTCAAATGTTGGAGTATTTGACTGAAAATTCCTTAATAACTCTTTTAATGAAGGAAC
TAATTCTGTAACTATTGTCTAATTTAATCACAAGATGTTTTAGTTCACTGTCCCAAGATATGGC
TAAAACTTTCAAGTAGCATGTTCTAAGCCCAAGGGAATAAAATCCACTCACAGTTCTACAAAAG
GAATCTATTTATAACCTATAAACTGAATGGGTGGCAACTGATGTACCTATAGAATCAAGAAAGG
TATTTTATAATGATTAGAAGTATCGATTCTTTCTGCTAATCACCAGGTGATTTCCTGTGAAACC
CATATCTTGCTGTTTGTGAATAAGAACCACACCTTGTAGAAGACACCTTAATCATACCTGAGAG
TTTAAAAGAAAACAGGTGATTAACCTCAATTCTTCTCCTGCACAAGAAAAATGGGCTGTGACCG
GAACTGTGGCCTCATCACTGGGGCTGTCATTGGTGCAGTTCTGGCTGTGTTTGGAGGTATTCTA
ATGCCAGTTGGGGATATGCTTATTGAGAAGACAATTAAAAAGGAAGTTGTCCTTGAAGAAGGTA
CAACGGCTTATCAAAACTGGGTTAAAACAGGCACAGAAGTTTACAGACAGTTTTGGATCTTTGA
TGTGCAAAATCCACAGGAAGTGGCAGTGAACAGCAGCAACATTAAGGTTAAGCAAAGAGGTCCT
TACACATACAGAGTTCGTTTTCTAGCCAAGGAGAATATAACTCATGATTATGAGGACAACACAG
TCTCTTTCGTTCAGCCCAATGCTGCAATCTTTGAACCTTCACTGTCAGTTGGAACCGAGAATGA
CACATTCACAGTTCTCAATCTAGCTGTAGCAGCTGCACCCCATATCTATCAAAATGCATTTGTT
CAAGTGGTACTCAATTCACTTATCAAAAAGTCAAAATCTTCTATGTTCCAAACCAGAACTTTGA
GAGAACTGTTGTGGGGCTACAAGGATCCATTCTTGAGTTTGGTTCCATACCCTATTTCTACCAC
AGTTGGTGTGTTCTTTCCTTACAATGATACTGCTGATGGAGTTTATAAAGTCTTCAGTGGAAGA
GATAATATAAACAATGTTGCCATAATAGACACTTATAAAGGTAAAAGGAATCTCTCCTATTGGC
CAAGTTATTGCGACATGATTAATGGTACAGATGCAGCTTCGTTTCCACCTTTTGTTGAGAAGAC
TCGATTATTGCGGTTCTTTTCCTCTGATATTTGCAGGTCCATCTATGCTGTTTTTGGATCTGAA
GTTGACCTGAAAGGAATCCCTGTGTATAGATTTGTTCTTCCAGCAAAGGCCTTTGCATCTCCAG
TTGATAATCCAGACAACCATTGTTTCTGCACAGAAAAAATTATCTCAAAAAATTGTACATCCTA
TGGTGTTCTAGACATTGGCAAATGCAAAGAAGGTAAACCTGTGTACATCTCGCTTCCTCATTTT
CTACATGCAAGTCATGATGTTTCAGAACCTATAGAAGGCTTAAATCCAAATGAAGAAGAACATA
GTACATTCTTGGATGTTGAACCTATAACTGGATTCACTTTACAATTTGCAAAAAGGCTACAAGT
CAACATATTGGTCAAGCCAGCAAAAAAAATTGAAGCATTAAAGAACCTGAAGAAAAATTATATT
GTGCCTATACTTTGGCTTAATGAGACTGGTACTATTGGCGATGAGAAGGCAGAAATGTTCAAAA
GTAAAGTGACTGGAAAAATAAAACTCCTTGGCCTGGTAGAAAATATCTTACTCGGTGTTGGGGT
GGTGATGTTTGTTGCATTTATGATTTCATATTGTGCATGCAGATCAAAGAGGAGTGGTAAATGA
GTCTGCACTTAAGCACCAGCTACATCAAGACCTTTGGTGATACCAGTCTACAAAATGGATATTT
AATGCTTTATTTTTTACAAAACACACATTATCCTTTAGTTGAAGAAATGGTGGCACTTTCTCTC
TATATATTTTTTTTGCACTAAGCTGCATCACATTTCAAAAAGATTAGGATGTCATTAAAATCTA
TACTTTGAACAGAAAAAGGTATCTTTTAAAATTCATCATTTATACAACTGAGTTGTTTTCAGTT
TCTGCAGACCTGGCTCTAGCATGAAATGATTGTTTTTACTTGGTTCTGGTGGTAAAGGAGAGGA
AGTGGACATTATAAACAAATCCTGGGCTCCCAACTCCCATCTTTCTCATGAACTGTGAAAAACC
CATTCACACTCAGAGGAGTGTCCCTGATAACTGGCAACAGACAGACCTCAGGAATGTCAGTACA
TTGCATTTCATGAGCATCAAATGTTTTGAAAGACATTTAAAAATGGAAAATGAGTGATTGGCTT
ATGAGCCATTTATTACAGCTTAAATTCCTTTCTCTATGTAATCCTTTGTACAGCAGACATCAAA
GCCACTTTTGTACTTTATAACAATGGGCTTATATTGTTTGTCACTGATCCTGCAGATGGTCATA
ATTTTTCACACACTGTAGCTCTTTGTATTTTAAGTACTTCGTTATGTTTTCATGTTGTATAGCT
CTTCTGGAAGTGAATAAATTTTGTCTTTCCATTTAGCTGCAACATATGCCTGGCAACCTCAGAA
TGCTGTTCTAGTATTAAGAGATGTATATGATATAAAAGAATTATTGTATGGAATGTTACAGAGA
GAATATAAGCATTAAATGTTATTTGTTGTAATAGTTCTTGCTTTCATAGTTGCCTCAGAAATAC
TGGTTTTGAGCATTAAAAGATATTCTTCCTTAAA

hide sequence

RefSeq Acc Id:

XM_013365366 ⟹ XP_013220820

RefSeq Status:

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	62,236,247 - 62,269,004 (+)	NCBI
SpeTri2.0	NW_004936810	805,551 - 838,303 (+)	NCBI

Sequence:

show sequence

ACACACATATGCTGGTAAGGGTTTCAGGATAGGATTTTTCTGCAGTATGTCATTTGGTCCTATG
AAGAACTGTCTGTTCAAATGTTGGAGTATTTGACTGAAAATTCCTTAATAACTCTTTTAATGCC
CAAGGGAATAAAATCCACTCACAGTTCTACAAAAGGAATCTATTTATAACCTATAAACTGAATG
GGTGGCAACTGATGTACCTATAGAATCAAGAAAGGTATTTTATAATGATTAGAAGTATCGATTC
TTTCTGCTAATCACCAGGTGATTTCCTGTGAAACCCATATCTTGCTGTTTGTGAATAAGAACCA
CACCTTGTAGAAGACACCTTAATCATACCTGAGAGTTTAAAAGAAAACAGGTGATTAACCTCAA
TTCTTCTCCTGCACAAGAAAAATGGGCTGTGACCGGAACTGTGGCCTCATCACTGGGGCTGTCA
TTGGTGCAGTTCTGGCTGTGTTTGGAGGTATTCTAATGCCAGTTGGGGATATGCTTATTGAGAA
GACAATTAAAAAGGAAGTTGTCCTTGAAGAAGGTACAACGGCTTATCAAAACTGGGTTAAAACA
GGCACAGAAGTTTACAGACAGTTTTGGATCTTTGATGTGCAAAATCCACAGGAAGTGGCAGTGA
ACAGCAGCAACATTAAGGTTAAGCAAAGAGGTCCTTACACATACAGAGTTCGTTTTCTAGCCAA
GGAGAATATAACTCATGATTATGAGGACAACACAGTCTCTTTCGTTCAGCCCAATGCTGCAATC
TTTGAACCTTCACTGTCAGTTGGAACCGAGAATGACACATTCACAGTTCTCAATCTAGCTGTAG
CAGCTGCACCCCATATCTATCAAAATGCATTTGTTCAAGTGGTACTCAATTCACTTATCAAAAA
GTCAAAATCTTCTATGTTCCAAACCAGAACTTTGAGAGAACTGTTGTGGGGCTACAAGGATCCA
TTCTTGAGTTTGGTTCCATACCCTATTTCTACCACAGTTGGTGTGTTCTTTCCTTACAATGATA
CTGCTGATGGAGTTTATAAAGTCTTCAGTGGAAGAGATAATATAAACAATGTTGCCATAATAGA
CACTTATAAAGGTAAAAGGAATCTCTCCTATTGGCCAAGTTATTGCGACATGATTAATGGTACA
GATGCAGCTTCGTTTCCACCTTTTGTTGAGAAGACTCGATTATTGCGGTTCTTTTCCTCTGATA
TTTGCAGGTCCATCTATGCTGTTTTTGGATCTGAAGTTGACCTGAAAGGAATCCCTGTGTATAG
ATTTGTTCTTCCAGCAAAGGCCTTTGCATCTCCAGTTGATAATCCAGACAACCATTGTTTCTGC
ACAGAAAAAATTATCTCAAAAAATTGTACATCCTATGGTGTTCTAGACATTGGCAAATGCAAAG
AAGGTAAACCTGTGTACATCTCGCTTCCTCATTTTCTACATGCAAGTCATGATGTTTCAGAACC
TATAGAAGGCTTAAATCCAAATGAAGAAGAACATAGTACATTCTTGGATGTTGAACCTATAACT
GGATTCACTTTACAATTTGCAAAAAGGCTACAAGTCAACATATTGGTCAAGCCAGCAAAAAAAA
TTGAAGCATTAAAGAACCTGAAGAAAAATTATATTGTGCCTATACTTTGGCTTAATGAGACTGG
TACTATTGGCGATGAGAAGGCAGAAATGTTCAAAAGTAAAGTGACTGGAAAAATAAAACTCCTT
GGCCTGGTAGAAAATATCTTACTCGGTGTTGGGGTGGTGATGTTTGTTGCATTTATGATTTCAT
ATTGTGCATGCAGATCAAAGAGGAGTGGTAAATGAGTCTGCACTTAAGCACCAGCTACATCAAG
ACCTTTGGTGATACCAGTCTACAAAATGGATATTTAATGCTTTATTTTTTACAAAACACACATT
ATCCTTTAGTTGAAGAAATGGTGGCACTTTCTCTCTATATATTTTTTTTGCACTAAGCTGCATC
ACATTTCAAAAAGATTAGGATGTCATTAAAATCTATACTTTGAACAGAAAAAGGTATCTTTTAA
AATTCATCATTTATACAACTGAGTTGTTTTCAGTTTCTGCAGACCTGGCTCTAGCATGAAATGA
TTGTTTTTACTTGGTTCTGGTGGTAAAGGAGAGGAAGTGGACATTATAAACAAATCCTGGGCTC
CCAACTCCCATCTTTCTCATGAACTGTGAAAAACCCATTCACACTCAGAGGAGTGTCCCTGATA
ACTGGCAACAGACAGACCTCAGGAATGTCAGTACATTGCATTTCATGAGCATCAAATGTTTTGA
AAGACATTTAAAAATGGAAAATGAGTGATTGGCTTATGAGCCATTTATTACAGCTTAAATTCCT
TTCTCTATGTAATCCTTTGTACAGCAGACATCAAAGCCACTTTTGTACTTTATAACAATGGGCT
TATATTGTTTGTCACTGATCCTGCAGATGGTCATAATTTTTCACACACTGTAGCTCTTTGTATT
TTAAGTACTTCGTTATGTTTTCATGTTGTATAGCTCTTCTGGAAGTGAATAAATTTTGTCTTTC
CATTTAGCTGCAACATATGCCTGGCAACCTCAGAATGCTGTTCTAGTATTAAGAGATGTATATG
ATATAAAAGAATTATTGTATGGAATGTTACAGAGAGAATATAAGCATTAAATGTTATTTGTTGT
AATAGTTCTTGCTTTCATAGTTGCCTCAGAAATACTGGTTTTGAGCATTAAAAGATATTCTTCC
TTAAA

hide sequence

RefSeq Acc Id:

XM_013365367 ⟹ XP_013220821

RefSeq Status:

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	62,222,603 - 62,269,004 (+)	NCBI
SpeTri2.0	NW_004936810	791,823 - 838,303 (+)	NCBI

Sequence:

show sequence

ACTGGAGTGTCAATCAAAATTCCACAGCCATTCTTGGATACTTGGAGGTGGGGCTATCTGGCAT
ACAGCAATGATTTGATCCAGCACTTGCAGCAAACAGACTGGAGTCATCAGTGTTATTCTGTGGC
CTTCCAACAGCATTTTCAAAATACGTTAATATTCGTGGCCTTGCACTCTCTCATCGGACTTCTA
ACCGCCCAAGGGAATAAAATCCACTCACAGTTCTACAAAAGGAATCTATTTATAACCTATAAAC
TGAATGGGTGGCAACTGATGTACCTATAGAATCAAGAAAGGTATTTTATAATGATTAGAAGTAT
CGATTCTTTCTGCTAATCACCAGGTGATTTCCTGTGAAACCCATATCTTGCTGTTTGTGAATAA
GAACCACACCTTGTAGAAGACACCTTAATCATACCTGAGAGTTTAAAAGAAAACAGGTGATTAA
CCTCAATTCTTCTCCTGCACAAGAAAAATGGGCTGTGACCGGAACTGTGGCCTCATCACTGGGG
CTGTCATTGGTGCAGTTCTGGCTGTGTTTGGAGGTATTCTAATGCCAGTTGGGGATATGCTTAT
TGAGAAGACAATTAAAAAGGAAGTTGTCCTTGAAGAAGGTACAACGGCTTATCAAAACTGGGTT
AAAACAGGCACAGAAGTTTACAGACAGTTTTGGATCTTTGATGTGCAAAATCCACAGGAAGTGG
CAGTGAACAGCAGCAACATTAAGGTTAAGCAAAGAGGTCCTTACACATACAGAGTTCGTTTTCT
AGCCAAGGAGAATATAACTCATGATTATGAGGACAACACAGTCTCTTTCGTTCAGCCCAATGCT
GCAATCTTTGAACCTTCACTGTCAGTTGGAACCGAGAATGACACATTCACAGTTCTCAATCTAG
CTGTAGCAGCTGCACCCCATATCTATCAAAATGCATTTGTTCAAGTGGTACTCAATTCACTTAT
CAAAAAGTCAAAATCTTCTATGTTCCAAACCAGAACTTTGAGAGAACTGTTGTGGGGCTACAAG
GATCCATTCTTGAGTTTGGTTCCATACCCTATTTCTACCACAGTTGGTGTGTTCTTTCCTTACA
ATGATACTGCTGATGGAGTTTATAAAGTCTTCAGTGGAAGAGATAATATAAACAATGTTGCCAT
AATAGACACTTATAAAGGTAAAAGGAATCTCTCCTATTGGCCAAGTTATTGCGACATGATTAAT
GGTACAGATGCAGCTTCGTTTCCACCTTTTGTTGAGAAGACTCGATTATTGCGGTTCTTTTCCT
CTGATATTTGCAGGTCCATCTATGCTGTTTTTGGATCTGAAGTTGACCTGAAAGGAATCCCTGT
GTATAGATTTGTTCTTCCAGCAAAGGCCTTTGCATCTCCAGTTGATAATCCAGACAACCATTGT
TTCTGCACAGAAAAAATTATCTCAAAAAATTGTACATCCTATGGTGTTCTAGACATTGGCAAAT
GCAAAGAAGGTAAACCTGTGTACATCTCGCTTCCTCATTTTCTACATGCAAGTCATGATGTTTC
AGAACCTATAGAAGGCTTAAATCCAAATGAAGAAGAACATAGTACATTCTTGGATGTTGAACCT
ATAACTGGATTCACTTTACAATTTGCAAAAAGGCTACAAGTCAACATATTGGTCAAGCCAGCAA
AAAAAATTGAAGCATTAAAGAACCTGAAGAAAAATTATATTGTGCCTATACTTTGGCTTAATGA
GACTGGTACTATTGGCGATGAGAAGGCAGAAATGTTCAAAAGTAAAGTGACTGGAAAAATAAAA
CTCCTTGGCCTGGTAGAAAATATCTTACTCGGTGTTGGGGTGGTGATGTTTGTTGCATTTATGA
TTTCATATTGTGCATGCAGATCAAAGAGGAGTGGTAAATGAGTCTGCACTTAAGCACCAGCTAC
ATCAAGACCTTTGGTGATACCAGTCTACAAAATGGATATTTAATGCTTTATTTTTTACAAAACA
CACATTATCCTTTAGTTGAAGAAATGGTGGCACTTTCTCTCTATATATTTTTTTTGCACTAAGC
TGCATCACATTTCAAAAAGATTAGGATGTCATTAAAATCTATACTTTGAACAGAAAAAGGTATC
TTTTAAAATTCATCATTTATACAACTGAGTTGTTTTCAGTTTCTGCAGACCTGGCTCTAGCATG
AAATGATTGTTTTTACTTGGTTCTGGTGGTAAAGGAGAGGAAGTGGACATTATAAACAAATCCT
GGGCTCCCAACTCCCATCTTTCTCATGAACTGTGAAAAACCCATTCACACTCAGAGGAGTGTCC
CTGATAACTGGCAACAGACAGACCTCAGGAATGTCAGTACATTGCATTTCATGAGCATCAAATG
TTTTGAAAGACATTTAAAAATGGAAAATGAGTGATTGGCTTATGAGCCATTTATTACAGCTTAA
ATTCCTTTCTCTATGTAATCCTTTGTACAGCAGACATCAAAGCCACTTTTGTACTTTATAACAA
TGGGCTTATATTGTTTGTCACTGATCCTGCAGATGGTCATAATTTTTCACACACTGTAGCTCTT
TGTATTTTAAGTACTTCGTTATGTTTTCATGTTGTATAGCTCTTCTGGAAGTGAATAAATTTTG
TCTTTCCATTTAGCTGCAACATATGCCTGGCAACCTCAGAATGCTGTTCTAGTATTAAGAGATG
TATATGATATAAAAGAATTATTGTATGGAATGTTACAGAGAGAATATAAGCATTAAATGTTATT
TGTTGTAATAGTTCTTGCTTTCATAGTTGCCTCAGAAATACTGGTTTTGAGCATTAAAAGATAT
TCTTCCTTAAA

hide sequence

RefSeq Acc Id:

XM_013365368 ⟹ XP_013220822

RefSeq Status:

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	62,222,618 - 62,269,004 (+)	NCBI
SpeTri2.0	NW_004936810	791,835 - 838,303 (+)	NCBI

Sequence:

show sequence

ATCAAAATTCCACAGCCATTCTTGGATACTTGGAGGTGGGGCTATCTGGCATACAGCAATGATT
TGATCCAGCACTTGCAGCAAACAGACTGGAGTCATCAGTGTTATTCTGTGGCCTTCCAACAGCA
TTTTCAAAATACGTTAATATTCGTGGCCTTGCACTCTCTCATCGGACTTCTAACCGGTATTTTA
TAATGATTAGAAGTATCGATTCTTTCTGCTAATCACCAGGTGATTTCCTGTGAAACCCATATCT
TGCTGTTTGTGAATAAGAACCACACCTTGTAGAAGACACCTTAATCATACCTGAGAGTTTAAAA
GAAAACAGGTGATTAACCTCAATTCTTCTCCTGCACAAGAAAAATGGGCTGTGACCGGAACTGT
GGCCTCATCACTGGGGCTGTCATTGGTGCAGTTCTGGCTGTGTTTGGAGGTATTCTAATGCCAG
TTGGGGATATGCTTATTGAGAAGACAATTAAAAAGGAAGTTGTCCTTGAAGAAGGTACAACGGC
TTATCAAAACTGGGTTAAAACAGGCACAGAAGTTTACAGACAGTTTTGGATCTTTGATGTGCAA
AATCCACAGGAAGTGGCAGTGAACAGCAGCAACATTAAGGTTAAGCAAAGAGGTCCTTACACAT
ACAGAGTTCGTTTTCTAGCCAAGGAGAATATAACTCATGATTATGAGGACAACACAGTCTCTTT
CGTTCAGCCCAATGCTGCAATCTTTGAACCTTCACTGTCAGTTGGAACCGAGAATGACACATTC
ACAGTTCTCAATCTAGCTGTAGCAGCTGCACCCCATATCTATCAAAATGCATTTGTTCAAGTGG
TACTCAATTCACTTATCAAAAAGTCAAAATCTTCTATGTTCCAAACCAGAACTTTGAGAGAACT
GTTGTGGGGCTACAAGGATCCATTCTTGAGTTTGGTTCCATACCCTATTTCTACCACAGTTGGT
GTGTTCTTTCCTTACAATGATACTGCTGATGGAGTTTATAAAGTCTTCAGTGGAAGAGATAATA
TAAACAATGTTGCCATAATAGACACTTATAAAGGTAAAAGGAATCTCTCCTATTGGCCAAGTTA
TTGCGACATGATTAATGGTACAGATGCAGCTTCGTTTCCACCTTTTGTTGAGAAGACTCGATTA
TTGCGGTTCTTTTCCTCTGATATTTGCAGGTCCATCTATGCTGTTTTTGGATCTGAAGTTGACC
TGAAAGGAATCCCTGTGTATAGATTTGTTCTTCCAGCAAAGGCCTTTGCATCTCCAGTTGATAA
TCCAGACAACCATTGTTTCTGCACAGAAAAAATTATCTCAAAAAATTGTACATCCTATGGTGTT
CTAGACATTGGCAAATGCAAAGAAGGTAAACCTGTGTACATCTCGCTTCCTCATTTTCTACATG
CAAGTCATGATGTTTCAGAACCTATAGAAGGCTTAAATCCAAATGAAGAAGAACATAGTACATT
CTTGGATGTTGAACCTATAACTGGATTCACTTTACAATTTGCAAAAAGGCTACAAGTCAACATA
TTGGTCAAGCCAGCAAAAAAAATTGAAGCATTAAAGAACCTGAAGAAAAATTATATTGTGCCTA
TACTTTGGCTTAATGAGACTGGTACTATTGGCGATGAGAAGGCAGAAATGTTCAAAAGTAAAGT
GACTGGAAAAATAAAACTCCTTGGCCTGGTAGAAAATATCTTACTCGGTGTTGGGGTGGTGATG
TTTGTTGCATTTATGATTTCATATTGTGCATGCAGATCAAAGAGGAGTGGTAAATGAGTCTGCA
CTTAAGCACCAGCTACATCAAGACCTTTGGTGATACCAGTCTACAAAATGGATATTTAATGCTT
TATTTTTTACAAAACACACATTATCCTTTAGTTGAAGAAATGGTGGCACTTTCTCTCTATATAT
TTTTTTTGCACTAAGCTGCATCACATTTCAAAAAGATTAGGATGTCATTAAAATCTATACTTTG
AACAGAAAAAGGTATCTTTTAAAATTCATCATTTATACAACTGAGTTGTTTTCAGTTTCTGCAG
ACCTGGCTCTAGCATGAAATGATTGTTTTTACTTGGTTCTGGTGGTAAAGGAGAGGAAGTGGAC
ATTATAAACAAATCCTGGGCTCCCAACTCCCATCTTTCTCATGAACTGTGAAAAACCCATTCAC
ACTCAGAGGAGTGTCCCTGATAACTGGCAACAGACAGACCTCAGGAATGTCAGTACATTGCATT
TCATGAGCATCAAATGTTTTGAAAGACATTTAAAAATGGAAAATGAGTGATTGGCTTATGAGCC
ATTTATTACAGCTTAAATTCCTTTCTCTATGTAATCCTTTGTACAGCAGACATCAAAGCCACTT
TTGTACTTTATAACAATGGGCTTATATTGTTTGTCACTGATCCTGCAGATGGTCATAATTTTTC
ACACACTGTAGCTCTTTGTATTTTAAGTACTTCGTTATGTTTTCATGTTGTATAGCTCTTCTGG
AAGTGAATAAATTTTGTCTTTCCATTTAGCTGCAACATATGCCTGGCAACCTCAGAATGCTGTT
CTAGTATTAAGAGATGTATATGATATAAAAGAATTATTGTATGGAATGTTACAGAGAGAATATA
AGCATTAAATGTTATTTGTTGTAATAGTTCTTGCTTTCATAGTTGCCTCAGAAATACTGGTTTT
GAGCATTAAAAGATATTCTTCCTTAAA

hide sequence

RefSeq Acc Id:

XM_013365369 ⟹ XP_013220823

RefSeq Status:

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	62,236,271 - 62,269,004 (+)	NCBI
SpeTri2.0	NW_004936810	805,556 - 838,303 (+)	NCBI

Sequence:

show sequence

CATATGCTGGTAAGGGTTTCAGGATAGGATTTTTCTGCAGTATGTCATTTGGTCCTATGAAGAA
CTGTCTGTTCAAATGTTGGAGTATTTGACTGAAAATTCCTTAATAACTCTTTTAATGGTATTTT
ATAATGATTAGAAGTATCGATTCTTTCTGCTAATCACCAGGTGATTTCCTGTGAAACCCATATC
TTGCTGTTTGTGAATAAGAACCACACCTTGTAGAAGACACCTTAATCATACCTGAGAGTTTAAA
AGAAAACAGGTGATTAACCTCAATTCTTCTCCTGCACAAGAAAAATGGGCTGTGACCGGAACTG
TGGCCTCATCACTGGGGCTGTCATTGGTGCAGTTCTGGCTGTGTTTGGAGGTATTCTAATGCCA
GTTGGGGATATGCTTATTGAGAAGACAATTAAAAAGGAAGTTGTCCTTGAAGAAGGTACAACGG
CTTATCAAAACTGGGTTAAAACAGGCACAGAAGTTTACAGACAGTTTTGGATCTTTGATGTGCA
AAATCCACAGGAAGTGGCAGTGAACAGCAGCAACATTAAGGTTAAGCAAAGAGGTCCTTACACA
TACAGAGTTCGTTTTCTAGCCAAGGAGAATATAACTCATGATTATGAGGACAACACAGTCTCTT
TCGTTCAGCCCAATGCTGCAATCTTTGAACCTTCACTGTCAGTTGGAACCGAGAATGACACATT
CACAGTTCTCAATCTAGCTGTAGCAGCTGCACCCCATATCTATCAAAATGCATTTGTTCAAGTG
GTACTCAATTCACTTATCAAAAAGTCAAAATCTTCTATGTTCCAAACCAGAACTTTGAGAGAAC
TGTTGTGGGGCTACAAGGATCCATTCTTGAGTTTGGTTCCATACCCTATTTCTACCACAGTTGG
TGTGTTCTTTCCTTACAATGATACTGCTGATGGAGTTTATAAAGTCTTCAGTGGAAGAGATAAT
ATAAACAATGTTGCCATAATAGACACTTATAAAGGTAAAAGGAATCTCTCCTATTGGCCAAGTT
ATTGCGACATGATTAATGGTACAGATGCAGCTTCGTTTCCACCTTTTGTTGAGAAGACTCGATT
ATTGCGGTTCTTTTCCTCTGATATTTGCAGGTCCATCTATGCTGTTTTTGGATCTGAAGTTGAC
CTGAAAGGAATCCCTGTGTATAGATTTGTTCTTCCAGCAAAGGCCTTTGCATCTCCAGTTGATA
ATCCAGACAACCATTGTTTCTGCACAGAAAAAATTATCTCAAAAAATTGTACATCCTATGGTGT
TCTAGACATTGGCAAATGCAAAGAAGGTAAACCTGTGTACATCTCGCTTCCTCATTTTCTACAT
GCAAGTCATGATGTTTCAGAACCTATAGAAGGCTTAAATCCAAATGAAGAAGAACATAGTACAT
TCTTGGATGTTGAACCTATAACTGGATTCACTTTACAATTTGCAAAAAGGCTACAAGTCAACAT
ATTGGTCAAGCCAGCAAAAAAAATTGAAGCATTAAAGAACCTGAAGAAAAATTATATTGTGCCT
ATACTTTGGCTTAATGAGACTGGTACTATTGGCGATGAGAAGGCAGAAATGTTCAAAAGTAAAG
TGACTGGAAAAATAAAACTCCTTGGCCTGGTAGAAAATATCTTACTCGGTGTTGGGGTGGTGAT
GTTTGTTGCATTTATGATTTCATATTGTGCATGCAGATCAAAGAGGAGTGGTAAATGAGTCTGC
ACTTAAGCACCAGCTACATCAAGACCTTTGGTGATACCAGTCTACAAAATGGATATTTAATGCT
TTATTTTTTACAAAACACACATTATCCTTTAGTTGAAGAAATGGTGGCACTTTCTCTCTATATA
TTTTTTTTGCACTAAGCTGCATCACATTTCAAAAAGATTAGGATGTCATTAAAATCTATACTTT
GAACAGAAAAAGGTATCTTTTAAAATTCATCATTTATACAACTGAGTTGTTTTCAGTTTCTGCA
GACCTGGCTCTAGCATGAAATGATTGTTTTTACTTGGTTCTGGTGGTAAAGGAGAGGAAGTGGA
CATTATAAACAAATCCTGGGCTCCCAACTCCCATCTTTCTCATGAACTGTGAAAAACCCATTCA
CACTCAGAGGAGTGTCCCTGATAACTGGCAACAGACAGACCTCAGGAATGTCAGTACATTGCAT
TTCATGAGCATCAAATGTTTTGAAAGACATTTAAAAATGGAAAATGAGTGATTGGCTTATGAGC
CATTTATTACAGCTTAAATTCCTTTCTCTATGTAATCCTTTGTACAGCAGACATCAAAGCCACT
TTTGTACTTTATAACAATGGGCTTATATTGTTTGTCACTGATCCTGCAGATGGTCATAATTTTT
CACACACTGTAGCTCTTTGTATTTTAAGTACTTCGTTATGTTTTCATGTTGTATAGCTCTTCTG
GAAGTGAATAAATTTTGTCTTTCCATTTAGCTGCAACATATGCCTGGCAACCTCAGAATGCTGT
TCTAGTATTAAGAGATGTATATGATATAAAAGAATTATTGTATGGAATGTTACAGAGAGAATAT
AAGCATTAAATGTTATTTGTTGTAATAGTTCTTGCTTTCATAGTTGCCTCAGAAATACTGGTTT
TGAGCATTAAAAGATATTCTTCCTTAAA

hide sequence

RefSeq Acc Id:

XM_040291695 ⟹ XP_040147629

RefSeq Status:

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	62,222,643 - 62,269,004 (+)	NCBI

RefSeq Acc Id:

XM_040291696 ⟹ XP_040147630

RefSeq Status:

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	62,188,852 - 62,269,004 (+)	NCBI

RefSeq Acc Id:

XM_040291697 ⟹ XP_040147631

RefSeq Status:

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	62,188,853 - 62,269,004 (+)	NCBI

RefSeq Acc Id:

XM_040291698 ⟹ XP_040147632

RefSeq Status:

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	62,188,869 - 62,269,004 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005340727	(Get FASTA)	NCBI Sequence Viewer
	XP_013220820	(Get FASTA)	NCBI Sequence Viewer
	XP_013220821	(Get FASTA)	NCBI Sequence Viewer
	XP_013220822	(Get FASTA)	NCBI Sequence Viewer
	XP_013220823	(Get FASTA)	NCBI Sequence Viewer
	XP_040147629	(Get FASTA)	NCBI Sequence Viewer
	XP_040147630	(Get FASTA)	NCBI Sequence Viewer
	XP_040147631	(Get FASTA)	NCBI Sequence Viewer
	XP_040147632	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_013220821 ⟸ XM_013365367

- UniProtKB:

I3MBR1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGCDRNCGLITGAVIGAVLAVFGGILMPVGDMLIEKTIKKEVVLEEGTTAYQNWVKTGTEVYRQ
FWIFDVQNPQEVAVNSSNIKVKQRGPYTYRVRFLAKENITHDYEDNTVSFVQPNAAIFEPSLSV
GTENDTFTVLNLAVAAAPHIYQNAFVQVVLNSLIKKSKSSMFQTRTLRELLWGYKDPFLSLVPY
PISTTVGVFFPYNDTADGVYKVFSGRDNINNVAIIDTYKGKRNLSYWPSYCDMINGTDAASFPP
FVEKTRLLRFFSSDICRSIYAVFGSEVDLKGIPVYRFVLPAKAFASPVDNPDNHCFCTEKIISK
NCTSYGVLDIGKCKEGKPVYISLPHFLHASHDVSEPIEGLNPNEEEHSTFLDVEPITGFTLQFA
KRLQVNILVKPAKKIEALKNLKKNYIVPILWLNETGTIGDEKAEMFKSKVTGKIKLLGLVENIL
LGVGVVMFVAFMISYCACRSKRSGK

hide sequence

RefSeq Acc Id:

XP_013220822 ⟸ XM_013365368

- UniProtKB:

I3MBR1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGCDRNCGLITGAVIGAVLAVFGGILMPVGDMLIEKTIKKEVVLEEGTTAYQNWVKTGTEVYRQ
FWIFDVQNPQEVAVNSSNIKVKQRGPYTYRVRFLAKENITHDYEDNTVSFVQPNAAIFEPSLSV
GTENDTFTVLNLAVAAAPHIYQNAFVQVVLNSLIKKSKSSMFQTRTLRELLWGYKDPFLSLVPY
PISTTVGVFFPYNDTADGVYKVFSGRDNINNVAIIDTYKGKRNLSYWPSYCDMINGTDAASFPP
FVEKTRLLRFFSSDICRSIYAVFGSEVDLKGIPVYRFVLPAKAFASPVDNPDNHCFCTEKIISK
NCTSYGVLDIGKCKEGKPVYISLPHFLHASHDVSEPIEGLNPNEEEHSTFLDVEPITGFTLQFA
KRLQVNILVKPAKKIEALKNLKKNYIVPILWLNETGTIGDEKAEMFKSKVTGKIKLLGLVENIL
LGVGVVMFVAFMISYCACRSKRSGK

hide sequence

RefSeq Acc Id:

XP_013220820 ⟸ XM_013365366

- UniProtKB:

I3MBR1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGCDRNCGLITGAVIGAVLAVFGGILMPVGDMLIEKTIKKEVVLEEGTTAYQNWVKTGTEVYRQ
FWIFDVQNPQEVAVNSSNIKVKQRGPYTYRVRFLAKENITHDYEDNTVSFVQPNAAIFEPSLSV
GTENDTFTVLNLAVAAAPHIYQNAFVQVVLNSLIKKSKSSMFQTRTLRELLWGYKDPFLSLVPY
PISTTVGVFFPYNDTADGVYKVFSGRDNINNVAIIDTYKGKRNLSYWPSYCDMINGTDAASFPP
FVEKTRLLRFFSSDICRSIYAVFGSEVDLKGIPVYRFVLPAKAFASPVDNPDNHCFCTEKIISK
NCTSYGVLDIGKCKEGKPVYISLPHFLHASHDVSEPIEGLNPNEEEHSTFLDVEPITGFTLQFA
KRLQVNILVKPAKKIEALKNLKKNYIVPILWLNETGTIGDEKAEMFKSKVTGKIKLLGLVENIL
LGVGVVMFVAFMISYCACRSKRSGK

hide sequence

RefSeq Acc Id:

XP_005340727 ⟸ XM_005340670

- UniProtKB:

I3MBR1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGCDRNCGLITGAVIGAVLAVFGGILMPVGDMLIEKTIKKEVVLEEGTTAYQNWVKTGTEVYRQ
FWIFDVQNPQEVAVNSSNIKVKQRGPYTYRVRFLAKENITHDYEDNTVSFVQPNAAIFEPSLSV
GTENDTFTVLNLAVAAAPHIYQNAFVQVVLNSLIKKSKSSMFQTRTLRELLWGYKDPFLSLVPY
PISTTVGVFFPYNDTADGVYKVFSGRDNINNVAIIDTYKGKRNLSYWPSYCDMINGTDAASFPP
FVEKTRLLRFFSSDICRSIYAVFGSEVDLKGIPVYRFVLPAKAFASPVDNPDNHCFCTEKIISK
NCTSYGVLDIGKCKEGKPVYISLPHFLHASHDVSEPIEGLNPNEEEHSTFLDVEPITGFTLQFA
KRLQVNILVKPAKKIEALKNLKKNYIVPILWLNETGTIGDEKAEMFKSKVTGKIKLLGLVENIL
LGVGVVMFVAFMISYCACRSKRSGK

hide sequence

RefSeq Acc Id:

XP_013220823 ⟸ XM_013365369

- UniProtKB:

I3MBR1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGCDRNCGLITGAVIGAVLAVFGGILMPVGDMLIEKTIKKEVVLEEGTTAYQNWVKTGTEVYRQ
FWIFDVQNPQEVAVNSSNIKVKQRGPYTYRVRFLAKENITHDYEDNTVSFVQPNAAIFEPSLSV
GTENDTFTVLNLAVAAAPHIYQNAFVQVVLNSLIKKSKSSMFQTRTLRELLWGYKDPFLSLVPY
PISTTVGVFFPYNDTADGVYKVFSGRDNINNVAIIDTYKGKRNLSYWPSYCDMINGTDAASFPP
FVEKTRLLRFFSSDICRSIYAVFGSEVDLKGIPVYRFVLPAKAFASPVDNPDNHCFCTEKIISK
NCTSYGVLDIGKCKEGKPVYISLPHFLHASHDVSEPIEGLNPNEEEHSTFLDVEPITGFTLQFA
KRLQVNILVKPAKKIEALKNLKKNYIVPILWLNETGTIGDEKAEMFKSKVTGKIKLLGLVENIL
LGVGVVMFVAFMISYCACRSKRSGK

hide sequence

RefSeq Acc Id:

XP_040147630 ⟸ XM_040291696

RefSeq Acc Id:

XP_040147631 ⟸ XM_040291697

RefSeq Acc Id:

XP_040147632 ⟸ XM_040291698

RefSeq Acc Id:

XP_040147629 ⟸ XM_040291695

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000008485	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSSTOP00000007617	ENTREZGENE, UniProtKB/TrEMBL
	ENSSTOP00000025792	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000008498	UniProtKB/TrEMBL
	ENSSTOT00000036004	UniProtKB/TrEMBL
InterPro	CD36/SCARB1/SNMP1	UniProtKB/TrEMBL
	CD36_chordates	UniProtKB/TrEMBL
	CD36_fam	UniProtKB/TrEMBL
NCBI Gene	Cd36	ENTREZGENE
PANTHER	PTHR11923	UniProtKB/TrEMBL
	PTHR11923:SF12	UniProtKB/TrEMBL
Pfam	CD36	UniProtKB/TrEMBL
PRINTS	CD36ANTIGEN	UniProtKB/TrEMBL
	CD36FAMILY	UniProtKB/TrEMBL
UniProt	I3MBR1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations