Lbp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 175,713,998 - 175,732,560 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936561 | 3,016,926 - 3,035,552 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936561 | 3,017,471 - 3,035,481 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LBP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 20 | 38,346,482 - 38,377,013 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 38,346,482 - 38,377,013 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 36,974,885 - 37,005,655 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 36,408,299 - 36,439,067 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 36,408,298 - 36,439,067 | NCBI | | | | | Celera | 20 | 33,683,680 - 33,714,456 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | q11.23 | NCBI | | | | | HuRef | 20 | 33,709,729 - 33,740,760 (+) | NCBI | | HuRef | | | CHM1_1 | 20 | 36,878,602 - 36,909,384 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 40,072,800 - 40,104,597 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Lbp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 158,148,413 - 158,174,772 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 158,148,413 - 158,174,772 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 158,306,493 - 158,332,852 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 158,306,493 - 158,332,852 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 158,132,229 - 158,158,588 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 157,997,986 - 158,023,737 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 164,244,570 - 164,269,152 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | H1 | NCBI | | | | | cM Map | 2 | 78.72 | NCBI | | | | |
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Lbp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 167,373,786 - 167,400,941 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 146,953,889 - 146,981,032 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 146,954,015 - 146,981,586 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 150,786,436 - 150,813,463 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 159,285,723 - 159,312,752 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 157,020,490 - 157,047,489 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 154,786,232 - 154,812,910 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 154,786,215 - 154,813,464 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 160,793,301 - 160,819,979 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 149,016,605 - 149,043,530 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 148,922,500 - 148,949,992 (+) | NCBI | | | | | Celera | 3 | 145,655,280 - 145,682,077 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
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LBP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 21 | 44,070,881 - 44,103,778 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 44,063,979 - 44,096,876 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 34,670,128 - 34,703,046 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 35,780,768 - 35,813,188 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 35,780,768 - 35,813,188 (+) | Ensembl | panpan1.1 | | panPan2 | |
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LBP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 24 | 26,810,369 - 26,833,515 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 26,809,843 - 26,833,434 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 26,456,134 - 26,479,256 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 27,506,422 - 27,529,551 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 27,506,460 - 27,529,472 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 26,780,778 - 26,803,800 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 26,888,642 - 26,911,780 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 27,377,130 - 27,400,265 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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LBP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 17 | 41,393,818 - 41,429,551 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 41,398,935 - 41,429,467 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 46,838,042 - 46,868,577 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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LBP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 2 | 25,375,364 - 25,407,181 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 25,374,755 - 25,406,839 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 74,213,568 - 74,246,762 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Lbp (Heterocephalus glaber - naked mole-rat) |
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