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ONTOLOGY REPORT - ANNOTATIONS

Term:response to type II interferon
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Accession:GO:0034341 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon.
Synonyms:exact_synonym: response to immune interferon;   response to type II IFN
 related_synonym: response to gamma-interferon

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response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:18433458 RGD:2315954 NCBI chrNW_004624760:1,865,474...1,889,394
Ensembl chrNW_004624760:1,865,376...1,889,203 		JBrowse link
G Bst2 bone marrow stromal cell antigen 2 involved_in ISO (MGI:5448513|PMID:21919738) UniProt PMID:21919738 MGI:5448513 NCBI chrNW_004624908:588,925...591,033 JBrowse link
G Calcoco2 calcium binding and coiled-coil domain 2 involved_in ISO (PMID:9230084) BHF-UCL PMID:9230084 NCBI chrNW_004624795:5,259,976...5,281,958
Ensembl chrNW_004624795:5,265,141...5,283,719 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO PMID:10477596 BHF-UCL PMID:10477596 RGD:8553666 NCBI chrNW_004624875:3,334,136...3,342,085
Ensembl chrNW_004624875:3,334,078...3,341,614 		JBrowse link
G Cd40 CD40 molecule involved_in ISO
IEA		 with tumor necrosis factor alpha RGD
TreeGrafter		 PMID:10403401 GO_REF:0000118 RGD:634252 NCBI chrNW_004624790:8,475,640...8,485,927
Ensembl chrNW_004624790:8,476,158...8,485,856 		JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:32855215)
(MGI:6478071|PMID:32855215)		 UniProt PMID:32855215 MGI:6478071 NCBI chrNW_004624774:9,699,876...9,708,871
Ensembl chrNW_004624774:9,700,393...9,709,514 		JBrowse link
G Cd86 CD86 molecule ISO RGD PMID:16839612 RGD:2313438 NCBI chrNW_004624912:350,201...432,410
Ensembl chrNW_004624912:350,157...426,712 		JBrowse link
G Ciita class II major histocompatibility complex transactivator involved_in
acts_upstream_of_or_within		 ISO (PMID:19041327), (PMID:32855215)
(PMID:16280321)
(MGI:6478071|PMID:32855215)		 UniProt
MGI		 PMID:16280321 PMID:19041327 PMID:32855215 MGI:6478071 NCBI chrNW_004624824:8,099,877...8,156,661
Ensembl chrNW_004624824:8,116,537...8,153,482 		JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in ISO (MGI:1312962|PMID:9811838) UniProt PMID:9811838 MGI:1312962 NCBI chrNW_004624903:2,596,049...2,601,315 JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 involved_in ISO (PMID:18373975) BHF-UCL PMID:18373975 NCBI chrNW_004624786:8,589,687...8,594,059 JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:11679576) UniProt PMID:11679576 NCBI chrNW_004624824:2,215,337...2,259,696
Ensembl chrNW_004624824:2,214,240...2,259,696 		JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in ISO (PMID:12607127), (PMID:7678411), (PMID:9445252) UniProt PMID:7678411 PMID:9445252 PMID:12607127 NCBI chrNW_004624731:14,459,164...14,502,485
Ensembl chrNW_004624731:14,459,303...14,500,429 		JBrowse link
G Hmgb1 high mobility group box 1 ISO RGD PMID:18004227 RGD:2316773 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Il23r interleukin 23 receptor involved_in ISO (PMID:12023369) BHF-UCL PMID:12023369 NCBI chrNW_004624742:27,899,934...27,954,145
Ensembl chrNW_004624742:27,901,071...27,941,109 		JBrowse link
G Kynu kynureninase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624732:42,627,789...42,751,037
Ensembl chrNW_004624732:42,627,715...42,753,165 		JBrowse link
G LOC101700851 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:10,176,865...10,181,725
Ensembl chrNW_004624802:10,176,919...10,181,657 		JBrowse link
G LOC101722087 interferon-induced transmembrane protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:22,074,711...22,096,092 JBrowse link
G LOC101722444 interferon-induced transmembrane protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:22,101,246...22,107,574 JBrowse link
G LOC101722790 interferon-induced transmembrane protein 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:22,128,395...22,129,653 JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:1,035,172...1,047,632
Ensembl chrNW_004624824:1,035,094...1,047,678 		JBrowse link
G Nub1 negative regulator of ubiquitin like proteins 1 involved_in ISO (PMID:16707496) UniProt PMID:16707496 NCBI chrNW_004624800:5,314,203...5,345,301
Ensembl chrNW_004624800:5,315,381...5,345,801 		JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 ISO RGD PMID:16604358 RGD:2312768 NCBI chrNW_004624961:466,234...477,880
Ensembl chrNW_004624961:467,656...477,884 		JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chrNW_004624828:2,285,577...2,293,307
Ensembl chrNW_004624828:2,287,275...2,292,199 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9261342) Ensembl
MGI		 PMID:9261342 GO_REF:0000107 NCBI chrNW_004624823:6,612,452...6,625,047
Ensembl chrNW_004624823:6,612,452...6,625,300 		JBrowse link
G Slc22a5 solute carrier family 22 member 5 involved_in ISO (PMID:20722056)
(MGI:7339320|PMID:20722056)		 UniProt PMID:20722056 MGI:7339320 NCBI chrNW_004624733:39,690,958...39,727,503
Ensembl chrNW_004624733:39,698,456...39,808,718 		JBrowse link
G Slc30a8 solute carrier family 30 member 8 ISO RGD PMID:19243577 RGD:2315023 NCBI chrNW_004624763:15,393,221...15,469,819
Ensembl chrNW_004624763:15,431,806...15,461,833 		JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:19157893) UniProt PMID:19157893 NCBI chrNW_004624757:17,393,046...17,528,783
Ensembl chrNW_004624757:17,392,998...17,528,320 		JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:8810287)
(PMID:9230084)		 BHF-UCL PMID:8810287 PMID:9230084 NCBI chrNW_004624843:3,982,920...4,058,081
Ensembl chrNW_004624843:3,983,040...4,061,930 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:11972023)
(MGI:7327234|PMID:11972023)		 UniProt PMID:11972023 MGI:7327234 NCBI chrNW_004624854:5,067,578...5,106,052
Ensembl chrNW_004624854:5,067,535...5,102,106 		JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (PMID:26347139) UniProt PMID:26347139 NCBI chrNW_004624817:5,643,788...5,651,514
Ensembl chrNW_004624817:5,639,779...5,653,361 		JBrowse link
cellular response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) UniProt PMID:19014335 MGI:5489057 NCBI chrNW_004624751:23,478,263...23,488,834
Ensembl chrNW_004624751:23,478,096...23,483,521 		JBrowse link
G Actb actin beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512 		JBrowse link
G Actg1 actin gamma 1 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624801:10,496,876...10,499,737
Ensembl chrNW_004624801:10,496,718...10,499,637 		JBrowse link
G Actr2 actin related protein 2 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624762:8,282,415...8,339,818
Ensembl chrNW_004624762:8,281,433...8,339,830 		JBrowse link
G Actr3 actin related protein 3 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811 		JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:18433458 RGD:2315954 NCBI chrNW_004624760:1,865,474...1,889,394
Ensembl chrNW_004624760:1,865,376...1,889,203 		JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in ISS UniProt GO_REF:0000024 NCBI chrNW_004624754:24,590,071...24,591,913
Ensembl chrNW_004624754:24,590,071...24,591,904 		JBrowse link
G Aqp4 aquaporin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:5,581,192...5,593,470
Ensembl chrNW_004624770:5,580,808...5,594,628 		JBrowse link
G Arg2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chrNW_004624734:33,321,161...33,352,306
Ensembl chrNW_004624734:33,321,295...33,352,277 		JBrowse link
G Asl argininosuccinate lyase ISO with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chrNW_004624740:8,414,664...8,423,797
Ensembl chrNW_004624740:8,414,733...8,423,777 		JBrowse link
G Ass1 argininosuccinate synthase 1 ISO with TNFalpha RGD PMID:11072090 PMID:12589771 RGD:1599307 RGD:4139899 NCBI chrNW_004624760:5,180,095...5,221,677
Ensembl chrNW_004624760:5,180,095...5,221,732 		JBrowse link
G Atl2 atlastin GTPase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624738:19,836,771...19,902,181
Ensembl chrNW_004624738:19,836,181...19,902,265 		JBrowse link
G Atl3 atlastin GTPase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624767:22,567,888...22,610,214
Ensembl chrNW_004624767:22,567,757...22,609,115 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chrNW_004624734:12,030,264...12,041,682
Ensembl chrNW_004624734:12,030,001...12,041,772 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chrNW_004624738:28,525,290...28,541,562
Ensembl chrNW_004624738:28,525,285...28,541,514 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chrNW_004624832:6,957,775...6,966,505
Ensembl chrNW_004624832:6,958,820...6,966,514 		JBrowse link
G Camk2a calcium/calmodulin dependent protein kinase II alpha involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chrNW_004624774:9,526,323...9,585,647
Ensembl chrNW_004624774:9,526,323...9,585,649 		JBrowse link
G Capg capping actin protein, gelsolin like acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624749:17,706,582...17,764,087
Ensembl chrNW_004624749:17,723,715...17,746,346 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:9407497) UniProt PMID:9407497 NCBI chrNW_004624875:3,334,136...3,342,085
Ensembl chrNW_004624875:3,334,078...3,341,614 		JBrowse link
G Cdc42 cell division cycle 42 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624764:6,874,453...6,891,952 JBrowse link
G Cdc42ep2 CDC42 effector protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chrNW_004624767:21,057,316...21,066,220
Ensembl chrNW_004624767:21,059,993...21,066,829 		JBrowse link
G Cdc42ep4 CDC42 effector protein 4 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624801:3,372,778...3,394,855 JBrowse link
G Cfh complement factor H ISO RGD PMID:12121434 RGD:632369 NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
G Ciita class II major histocompatibility complex transactivator ISO RGD PMID:11071855 RGD:632488 NCBI chrNW_004624824:8,099,877...8,156,661
Ensembl chrNW_004624824:8,116,537...8,153,482 		JBrowse link
G Cldn1 claudin 1 ISO RGD PMID:18768927 RGD:11344890 NCBI chrNW_004624730:66,885,674...66,902,345
Ensembl chrNW_004624730:66,885,319...66,903,079 		JBrowse link
G Cripto cripto, EGF-CFC family member involved_in ISO (PMID:17720976) UniProt PMID:17720976 NCBI chrNW_004624730:74,547,226...74,550,526 JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:18995835)
(MGI:5466658|PMID:23071094)		 UniProt PMID:18995835 PMID:23071094 MGI:5466658 NCBI chrNW_004624809:9,585,426...9,794,582
Ensembl chrNW_004624809:9,586,225...9,793,208 		JBrowse link
G Dapk3 death associated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624828:5,616,839...5,626,849
Ensembl chrNW_004624828:5,621,696...5,625,601 		JBrowse link
G Daxx death domain associated protein ISO RGD PMID:21572393 RGD:9587767 NCBI chrNW_004624754:23,504,465...23,509,034
Ensembl chrNW_004624754:23,505,386...23,509,241 		JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:22301113 RGD:8662301 NCBI chrNW_004624756:13,842,482...13,849,003
Ensembl chrNW_004624756:13,842,164...13,849,029 		JBrowse link
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 involved_in ISO (PMID:15479637) UniProt PMID:15479637 NCBI chrNW_004624835:3,635,829...3,695,875
Ensembl chrNW_004624835:3,635,457...3,695,909 		JBrowse link
G Evl Enah/Vasp-like acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624734:3,926,939...4,023,841
Ensembl chrNW_004624734:3,927,004...4,071,621 		JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:10029626 RGD:14700709 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848 		JBrowse link
G Faslg Fas ligand ISO RGD PMID:10029626 RGD:14700709 NCBI chrNW_004624771:9,031,978...9,038,760
Ensembl chrNW_004624771:9,032,016...9,038,825 		JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624821:691,291...835,244
Ensembl chrNW_004624821:691,272...836,322 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:3,257,805...3,261,736
Ensembl chrNW_004624860:3,257,853...3,261,735 		JBrowse link
G Gbp5 guanylate binding protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18025219) UniProt
MGI		 PMID:18025219 GO_REF:0000117 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
G Gsn gelsolin acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624760:13,943,680...14,004,660
Ensembl chrNW_004624760:13,943,888...13,969,905 		JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:7865494 RGD:11520781 NCBI chrNW_004624828:2,432,584...2,451,997
Ensembl chrNW_004624828:2,432,550...2,453,071 		JBrowse link
G Il12b interleukin 12B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18025219) Ensembl
MGI		 PMID:18025219 GO_REF:0000107 NCBI chrNW_004624733:30,146,050...30,156,144
Ensembl chrNW_004624733:30,146,050...30,154,589 		JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 involved_in ISO (PMID:12023369) BHF-UCL PMID:12023369 NCBI chrNW_004624908:1,472,059...1,481,423 JBrowse link
G Il18 interleukin 18 ISO RGD PMID:18547159 RGD:4889457 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687 		JBrowse link
G Irf1 interferon regulatory factor 1 ISO RGD PMID:21261980 RGD:5128727 NCBI chrNW_004624733:39,596,565...39,603,428
Ensembl chrNW_004624733:39,596,501...39,603,526 		JBrowse link
G Irf8 interferon regulatory factor 8 involved_in ISO (PMID:25122610) UniProt
RGD		 PMID:21261980 PMID:25122610 RGD:5128727 NCBI chrNW_004624746:2,272,385...2,290,400
Ensembl chrNW_004624746:2,272,389...2,290,455 		JBrowse link
G Irgm immunity related GTPase M acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Kif16b kinesin family member 16B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624741:17,424,335...17,750,531 JBrowse link
G Kif5b kinesin family member 5B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624805:4,464,538...4,514,784
Ensembl chrNW_004624805:4,465,235...4,514,870 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:23817958) UniProt PMID:23817958 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G LOC101698177 guanylate-binding protein 6 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624742:8,336,898...8,383,334
Ensembl chrNW_004624742:8,366,651...8,384,618 		JBrowse link
G LOC101698463 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in ISO (PMID:8568247) UniProt PMID:8568247 NCBI chrNW_004624754:23,674,935...23,683,044
Ensembl chrNW_004624754:23,674,448...23,683,662 		JBrowse link
G LOC101698564 guanylate-binding protein 5 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624742:8,426,088...8,441,480 JBrowse link
G LOC101698926 guanylate-binding protein 4 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624742:8,478,930...8,499,218 JBrowse link
G LOC101699770 guanylate-binding protein 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624742:8,543,804...8,564,944
Ensembl chrNW_004624742:8,543,688...8,594,728 		JBrowse link
G LOC101700852 guanylate-binding protein 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624742:8,581,575...8,595,931 JBrowse link
G LOC101703821 HLA class II histocompatibility antigen, DQ beta 1 chain involved_in ISO (MGI:4942269|PMID:9244347), (MGI:4942274|PMID:7691725), (MGI:4942276|PMID:2502420), (MGI:4942277|PMID:2493384), (MGI:4943415|PMID:1845803) BHF-UCL PMID:1845803 PMID:2493384 PMID:2502420 PMID:7691725 PMID:9244347 MGI:4942269 MGI:4942274 MGI:4942276 MGI:4942277 MGI:4943415 NCBI chrNW_004624754:23,895,509...23,902,487
Ensembl chrNW_004624754:23,895,607...23,906,713 		JBrowse link
G Mrc1 mannose receptor C-type 1 acts_upstream_of_or_within ISO (PMID:22832163) MGI PMID:22832163 NCBI chrNW_004624796:10,041,483...10,184,458
Ensembl chrNW_004624796:10,145,610...10,180,671
Ensembl chrNW_004624796:10,145,610...10,180,671 		JBrowse link
G Mst1 macrophage stimulating 1 ISO RGD PMID:21572393 RGD:9587767 NCBI chrNW_004624730:3,612,467...3,617,257
Ensembl chrNW_004624730:3,610,241...3,617,530 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:7524476 RGD:10059620 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806 		JBrowse link
G Myo18a myosin XVIIIA acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624786:1,626,555...1,726,204
Ensembl chrNW_004624786:1,629,949...1,715,031 		JBrowse link
G Myo1c myosin IC acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624786:4,188,143...4,211,712
Ensembl chrNW_004624786:4,188,143...4,211,732 		JBrowse link
G Nos2 nitric oxide synthase 2 acts_upstream_of_or_within ISO (PMID:18025219) MGI PMID:18025219 NCBI chrNW_004624786:491,944...530,427
Ensembl chrNW_004624786:489,311...528,271 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:15231837) UniProt PMID:15231837 NCBI chrNW_004624821:306,055...311,101
Ensembl chrNW_004624821:305,864...313,881 		JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:18466611 RGD:2311658 NCBI chrNW_004624870:33,293...122,536 JBrowse link
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:37797010) UniProt PMID:37797010 NCBI chrNW_004624754:20,810,398...20,815,182
Ensembl chrNW_004624754:20,808,701...20,815,206 		JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624762:524,065...561,558 JBrowse link
G Rab12 RAB12, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624770:17,636,031...17,654,863
Ensembl chrNW_004624770:17,635,901...17,653,919 		JBrowse link
G Rab20 RAB20, member RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chrNW_004624793:2,180,803...2,199,420
Ensembl chrNW_004624793:2,180,419...2,198,962 		JBrowse link
G Rab43 RAB43, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624943:991,802...1,024,434
Ensembl chrNW_004624943:991,682...1,024,434 		JBrowse link
G Rab7b RAB7B, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624807:5,307,361...5,334,578
Ensembl chrNW_004624807:5,307,440...5,334,945 		JBrowse link
G Rpl13a ribosomal protein L13a involved_in ISO (MGI:5466658|PMID:23071094)
(PMID:15479637)		 UniProt PMID:15479637 PMID:23071094 MGI:5466658 NCBI chrNW_004624832:4,728,298...4,732,397
Ensembl chrNW_004624832:4,727,899...4,732,367 		JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624871:1,667,292...1,705,550
Ensembl chrNW_004624871:1,667,291...1,702,783 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chrNW_004624741:3,157,734...3,202,018 JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:18655181) UniProt PMID:18655181 NCBI chrNW_004624730:2,639,940...2,649,358
Ensembl chrNW_004624730:2,640,208...2,649,203 		JBrowse link
G Slk STE20 like kinase ISO RGD PMID:21572393 RGD:9587767 NCBI chrNW_004624831:3,076,548...3,144,107
Ensembl chrNW_004624831:3,076,856...3,142,289 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO RGD PMID:10707961 RGD:151232287 NCBI chrNW_004624824:8,444,877...8,446,628 JBrowse link
G Socs3 suppressor of cytokine signaling 3 ISO RGD PMID:10707961 RGD:151232287 NCBI chrNW_004624801:7,841,230...7,843,912
Ensembl chrNW_004624801:7,840,889...7,843,860 		JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:9564825 RGD:4891971 NCBI chrNW_004624780:5,494,430...5,501,063
Ensembl chrNW_004624780:5,493,786...5,502,030 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:11972023), (PMID:23386060) UniProt PMID:11972023 PMID:23386060 NCBI chrNW_004624854:5,067,578...5,106,052
Ensembl chrNW_004624854:5,067,535...5,102,106 		JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624753:10,150,811...10,180,794
Ensembl chrNW_004624753:10,148,416...10,191,153 		JBrowse link
G Stx4 syntaxin 4 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624782:14,094,727...14,101,210
Ensembl chrNW_004624782:14,090,850...14,105,058 		JBrowse link
G Stx8 syntaxin 8 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624786:11,712,667...11,992,201 JBrowse link
G Stxbp1 syntaxin binding protein 1 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624760:7,843,741...7,914,444
Ensembl chrNW_004624760:7,842,640...7,914,484 		JBrowse link
G Stxbp2 syntaxin binding protein 2 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624828:718,728...725,063
Ensembl chrNW_004624828:718,485...725,483 		JBrowse link
G Stxbp3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chrNW_004624772:4,540,518...4,589,562
Ensembl chrNW_004624772:4,540,450...4,589,896 		JBrowse link
G Stxbp4 syntaxin binding protein 4 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624795:10,255,874...10,497,486
Ensembl chrNW_004624795:10,271,351...10,420,153 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:15479637) UniProt PMID:15479637 NCBI chrNW_004624799:8,616,787...8,657,466
Ensembl chrNW_004624799:8,616,808...8,652,923 		JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO (PMID:11672593) UniProt PMID:11672593 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tlr3 toll like receptor 3 NOT ISO intestinal epithelial cells
thyrocytes		 RGD PMID:15661832 PMID:16638093 RGD:5128794 RGD:5128798 NCBI chrNW_004624769:16,925,969...16,945,250
Ensembl chrNW_004624769:16,925,984...16,941,196 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (MGI:7387167|PMID:29849090) RGD
BHF-UCL		 PMID:16525716 PMID:29849090 MGI:7387167 RGD:14985246 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
G Vamp3 vesicle associated membrane protein 3 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624818:4,010,130...4,019,695
Ensembl chrNW_004624818:4,009,991...4,019,728 		JBrowse link
G Vamp4 vesicle associated membrane protein 4 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624771:9,986,835...10,034,112 JBrowse link
G Vamp8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624749:17,558,429...17,562,765
Ensembl chrNW_004624749:17,558,429...17,562,723 		JBrowse link
G Vim vimentin acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624796:10,624,672...10,632,300
Ensembl chrNW_004624796:10,623,929...10,632,600 		JBrowse link
G Vps26b VPS26, retromer complex component B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624812:8,783,350...8,804,755
Ensembl chrNW_004624812:8,783,378...8,804,753 		JBrowse link
G Was WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624893:453,793...493,696
Ensembl chrNW_004624893:487,396...493,482 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18174455) UniProt PMID:18174455 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
G Zyx zyxin acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624800:11,380,787...11,389,418
Ensembl chrNW_004624800:11,381,178...11,389,271 		JBrowse link
negative regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (PMID:16709924) UniProt PMID:16709924 NCBI chrNW_004624753:5,737,720...5,749,313
Ensembl chrNW_004624753:5,737,237...5,752,966 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:11679576) UniProt PMID:11679576 NCBI chrNW_004624824:2,215,337...2,259,696
Ensembl chrNW_004624824:2,214,240...2,259,696 		JBrowse link
G Otop1 otopetrin 1 involved_in ISO (MGI:5750846|PMID:24379350) UniProt PMID:24379350 MGI:5750846 NCBI chrNW_004624755:21,377,288...21,403,621
Ensembl chrNW_004624755:21,377,721...21,403,621 		JBrowse link
G Parp14 poly(ADP-ribose) polymerase family member 14 involved_in ISO (PMID:27796300)
(MGI:5905929|PMID:27796300)		 UniProt PMID:27796300 MGI:5905929 NCBI chrNW_004624912:969,144...1,022,506
Ensembl chrNW_004624912:969,236...1,023,564 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:21268089) BHF-UCL PMID:21268089 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in
NOT|involved_in		 ISO (PMID:12138178)
(MGI:5493216|PMID:12138178)		 UniProt PMID:12138178 MGI:5493216 NCBI chrNW_004624770:19,808,400...19,877,494
Ensembl chrNW_004624770:19,808,400...19,876,503 		JBrowse link
positive regulation of response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18641331) MGI
Ensembl		 PMID:18641331 GO_REF:0000107 NCBI chrNW_004624817:7,947,554...7,957,553
Ensembl chrNW_004624817:7,947,639...7,957,462 		JBrowse link
positive regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18641331) Ensembl
MGI		 PMID:18641331 GO_REF:0000107 NCBI chrNW_004624817:7,947,554...7,957,553
Ensembl chrNW_004624817:7,947,639...7,957,462 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (MGI:3656111|PMID:16888103)
(PMID:16888103)		 UniProt PMID:16888103 MGI:3656111 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO (PMID:18339625) MGI PMID:18339625 NCBI chrNW_004624795:3,572,025...3,605,675
Ensembl chrNW_004624795:3,572,266...3,607,126 		JBrowse link
G Nlrc5 NLR family CARD domain containing 5 involved_in ISO (PMID:20061403)
(PMID:20639463)		 UniProt
BHF-UCL		 PMID:20061403 PMID:20639463 NCBI chrNW_004624746:28,954,009...29,030,337
Ensembl chrNW_004624746:28,954,016...29,030,322 		JBrowse link
G Parp9 poly(ADP-ribose) polymerase family member 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624912:827,112...968,501
Ensembl chrNW_004624912:827,547...859,199 		JBrowse link
G Txk TXK tyrosine kinase involved_in ISO (PMID:11859127) UniProt PMID:11859127 NCBI chrNW_004624761:18,841,795...18,897,564
Ensembl chrNW_004624761:18,841,795...18,897,458 		JBrowse link
regulation of response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp9 poly(ADP-ribose) polymerase family member 9 involved_in ISO (PMID:16809771) UniProt PMID:16809771 NCBI chrNW_004624912:827,112...968,501
Ensembl chrNW_004624912:827,547...859,199 		JBrowse link
regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc37 cell division cycle 37, HSP90 cochaperone acts_upstream_of_or_within ISO (PMID:16280321) MGI PMID:16280321 NCBI chrNW_004624828:2,523,761...2,533,387
Ensembl chrNW_004624828:2,521,272...2,535,475 		JBrowse link
type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18641331) Ensembl
MGI		 PMID:18641331 GO_REF:0000107 NCBI chrNW_004624817:7,947,554...7,957,553
Ensembl chrNW_004624817:7,947,639...7,957,462 		JBrowse link
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534 		JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624886:618,372...640,954
Ensembl chrNW_004624886:618,289...642,928 		JBrowse link
G Ifngr2 interferon gamma receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624745:21,628,968...21,652,305
Ensembl chrNW_004624745:21,628,797...21,651,652 		JBrowse link
G Irf1 interferon regulatory factor 1 involved_in ISO (MGI:5317515|PMID:21909274) UniProt PMID:21909274 MGI:5317515 NCBI chrNW_004624733:39,596,565...39,603,428
Ensembl chrNW_004624733:39,596,501...39,603,526 		JBrowse link
G Jak1 Janus kinase 1 involved_in ISO (PMID:8232552) UniProt PMID:8232552 NCBI chrNW_004624742:29,631,391...29,723,981
Ensembl chrNW_004624742:29,689,965...29,723,981 		JBrowse link
G Jak2 Janus kinase 2 involved_in ISO PMID:11536325 BHF-UCL PMID:11536325 RGD:8553830 NCBI chrNW_004624736:9,724,876...9,827,364
Ensembl chrNW_004624736:9,724,369...9,830,365 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (MGI:5493216|PMID:12138178)
(PMID:26479788)
(PMID:21268089)		 UniProt
BHF-UCL		 PMID:12138178 PMID:21268089 PMID:26479788 MGI:5493216 NCBI chrNW_004624854:5,067,578...5,106,052
Ensembl chrNW_004624854:5,067,535...5,102,106 		JBrowse link
G Tp53 tumor protein p53 involved_in ISO (MGI:5490676|PMID:23629966) CAFA PMID:23629966 MGI:5490676 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218 		JBrowse link
G Tyk2 tyrosine kinase 2 involved_in ISO (PMID:8232552) UniProt PMID:8232552 NCBI chrNW_004624828:2,499,811...2,518,817
Ensembl chrNW_004624828:2,500,339...2,517,694 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15093
    immune system process 2103
      immune response 1306
        innate immune response 664
          response to type II interferon 142
            cellular response to type II interferon + 117
            negative regulation of response to type II interferon + 6
            positive regulation of response to type II interferon + 6
            regulation of response to type II interferon + 13
Path 2
Term Annotations click to browse term
  biological_process 15093
    response to stimulus 8161
      response to biotic stimulus 1361
        response to external biotic stimulus 1317
          response to other organism 1314
            defense response to other organism 906
              defense response to symbiont 802
                innate immune response 664
                  response to type II interferon 142
                    cellular response to type II interferon + 117
                    negative regulation of response to type II interferon + 6
                    positive regulation of response to type II interferon + 6
                    regulation of response to type II interferon + 13
paths to the root