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ONTOLOGY REPORT - ANNOTATIONS

Term:signal transduction involved in regulation of gene expression
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Accession:GO:0023019 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of gene expression as a consequence of a process in which a signal is released and/or conveyed from one location to another.
Synonyms:related_synonym: regulation of gene expression as a consequence of signal transmission


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signal transduction involved in regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd74 CD74 molecule involved_in ISO (PMID:23736979) RGD PMID:23736979 NCBI chr18:54,256,757...54,266,003 JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 5:97,306,427...97,309,783 JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:23,330,917...23,340,486 JBrowse link
G Edn1 endothelin 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16820593)		 Ensembl
RGD		 PMID:16820593 GO_REF:0000107 NCBI chr17:22,660,799...22,666,687 JBrowse link
G Epcam epithelial cell adhesion molecule involved_in ISO
IEA		 (PMID:19136966)
GO_REF:0000107		 RGD
Ensembl		 PMID:19136966 GO_REF:0000107 NCBI chr 6:6,880,142...6,896,103 JBrowse link
G Fgf5 fibroblast growth factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18462699)		 Ensembl
RGD		 PMID:18462699 GO_REF:0000107 NCBI chr14:11,323,827...11,346,164 JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 1:244,584,477...244,590,578 JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 3:135,470,123...135,474,326 JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr15:41,635,572...41,707,252 JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 6:123,388,072...123,390,111 JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18462699)		 Ensembl
RGD		 PMID:18462699 GO_REF:0000107 NCBI chr 3:152,186,787...152,248,320 JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO (PMID:9346484) RGD PMID:9346484 NCBI chr16:76,021,968...76,075,717 JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 1:133,738,357...133,739,875 JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 1:133,756,601...133,759,207 JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (PMID:21465616) RGD PMID:21465616 NCBI chr14:72,961,036...72,964,970 JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97168 (PMID:21465616)		 Ensembl
RGD		 PMID:21465616 GO_REF:0000107 NCBI chr17:11,097,214...11,102,879 JBrowse link
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 3:64,359,554...64,363,526 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:34721373) RGD PMID:34721373 NCBI chr 2:226,689,745...226,805,897 JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in ISO (PMID:25038658) RGD PMID:25038658 NCBI chr 6:78,593,844...78,597,307 JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in IDA PMID:20847060 BHF-UCL PMID:20847060 RGD:8554370 NCBI chr 2:145,241,975...145,248,186 JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in IMP PMID:22073128 BHF-UCL PMID:22073128 RGD:8554355 NCBI chr13:92,307,593...92,339,406 JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18462699)		 Ensembl
RGD		 PMID:18462699 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022 JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18462699)		 Ensembl
RGD		 PMID:18462699 GO_REF:0000107 NCBI chr14:33,360,027...33,408,604 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:1406630) RGD PMID:1406630 NCBI chr 1:212,354,336...212,364,815 JBrowse link
G Smad2 SMAD family member 2 involved_in IMP PMID:22073128 BHF-UCL PMID:22073128 RGD:8554355 NCBI chr18:72,124,792...72,193,345 JBrowse link
G Smad3 SMAD family member 3 involved_in IMP PMID:22073128 BHF-UCL PMID:22073128 RGD:8554355 NCBI chr 8:73,022,204...73,132,324 JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 5:15,016,660...15,022,228 JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr10:72,838,926...72,859,066 JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 1:181,387,851...181,392,762 JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 1:52,298,104...52,309,813 JBrowse link
G Traf2 Tnf receptor-associated factor 2 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr 3:8,341,950...8,366,609 JBrowse link
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr20:43,011,405...43,054,654 JBrowse link
G Traf5 TNF receptor-associated factor 5 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr13:103,569,944...103,618,747 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    cellular process 19525
      signal transduction 7251
        signal transduction involved in regulation of gene expression 33
Path 2
Term Annotations click to browse term
  biological_process 20536
    biological regulation 13822
      regulation of biological process 13376
        regulation of cellular process 13014
          regulation of metabolic process 6834
            regulation of macromolecule metabolic process 6302
              regulation of macromolecule biosynthetic process 5425
                regulation of gene expression 5308
                  signal transduction involved in regulation of gene expression 33
paths to the root