ONTOLOGY REPORT - ANNOTATIONS
Term: inner ear morphogenesis
Accession: GO:0042472
browse the term
Definition: The process in which the anatomical structures of the inner ear are generated and organized. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively.
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ABR
ABR activator of RhoGEF and GTPase
acts_upstream_of_or_within
ISO
(PMID:11921339)
MGI
PMID:11921339
NCBI chr17:972,009...1,174,953
Ensembl chr17:895,013...1,069,973
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ALDH1A3
aldehyde dehydrogenase 1 family member A3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:23536097)
Ensembl MGI
PMID:23536097
GO_REF:0000107
NCBI chr15:79,603,893...79,640,866
Ensembl chr15:98,891,770...98,928,396
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ATOH1
atonal bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16145671) (PMID:15543141)
Ensembl MGI
PMID:15543141 PMID:16145671
GO_REF:0000107
NCBI chr 4:86,188,534...86,191,301
Ensembl chr 4:96,863,762...96,864,832
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ATP2B2
ATPase plasma membrane Ca2+ transporting 2
acts_upstream_of_or_within
ISO
(PMID:9668038)
MGI
PMID:9668038
NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006
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ATP6V1B1
ATPase H+ transporting V1 subunit B1
NOT|involved_in
ISO IEA
(MGI:2669353|PMID:12782355)
UniProt Ensembl
PMID:12782355
GO_REF:0000107 MGI:2669353
NCBI chr2A:71,000,096...71,030,306
Ensembl chr2A:72,113,859...72,143,612
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BCR
BCR activator of RhoGEF and GTPase
acts_upstream_of_or_within
ISO
(PMID:11921339)
MGI
PMID:11921339
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CELSR1
cadherin EGF LAG seven-pass G-type receptor 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12842012)
Ensembl MGI
PMID:12842012
GO_REF:0000107
Ensembl chr22:45,428,159...45,604,453
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CHD7
chromodomain helicase DNA binding protein 7
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15353999)
Ensembl MGI
PMID:15353999
GO_REF:0000107
NCBI chr 8:57,091,002...57,282,471
Ensembl chr 8:58,816,840...58,945,186
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CHRNA10
cholinergic receptor nicotinic alpha 10 subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18077337)
Ensembl MGI
PMID:18077337
GO_REF:0000107
NCBI chr11:3,543,450...3,552,036
Ensembl chr11:3,651,580...3,656,780
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CHRNA9
cholinergic receptor nicotinic alpha 9 subunit
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18077337)
Ensembl MGI
PMID:18077337
GO_REF:0000107
NCBI chr 4:34,654,043...34,675,984
Ensembl chr 4:40,509,475...40,528,869
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COL11A1
collagen type XI alpha 1 chain
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:1952599)
Ensembl MGI
PMID:1952599
GO_REF:0000107
NCBI chr 1:105,538,215...105,769,973
Ensembl chr 1:104,249,891...104,481,259
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COL2A1
collagen type II alpha 1 chain
acts_upstream_of_or_within
ISO
(PMID:9165353)
MGI
PMID:9165353
NCBI chr12:40,726,137...40,757,690
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DCANP1
dendritic cell associated nuclear protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:130,838,844...130,839,588
Ensembl chr 5:136,979,950...136,980,694
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DLX5
distal-less homeobox 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12142028) (PMID:16900517)
Ensembl MGI
PMID:12142028 PMID:16900517
GO_REF:0000107
NCBI chr 7:88,972,066...88,977,588
Ensembl chr 7:102,555,267...102,561,186
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DLX6
distal-less homeobox 6
acts_upstream_of_or_within
ISO
(PMID:16900517)
MGI
PMID:16900517
NCBI chr 7:88,957,570...88,962,703
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EPHB2
EPH receptor B2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:21,895,961...22,107,649
Ensembl chr 1:22,912,570...23,047,118
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EYA1
EYA transcriptional coactivator and phosphatase 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16916509) (PMID:15817220) (PMID:10471511)
Ensembl MGI
PMID:10471511 PMID:15817220 PMID:16916509
GO_REF:0000107
NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829
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FGF10
fibroblast growth factor 10
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11062007) (PMID:16691564)
Ensembl MGI
PMID:11062007 PMID:16691564
GO_REF:0000107
NCBI chr 5:65,979,443...66,069,314
Ensembl chr 5:71,028,187...71,111,706
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FGF8
fibroblast growth factor 8
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15809037)
Ensembl MGI
PMID:15809037
GO_REF:0000107
NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916
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FGF9
fibroblast growth factor 9
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15328018)
Ensembl MGI
PMID:15328018
GO_REF:0000107
NCBI chr13:2,967,713...3,000,554
Ensembl chr13:21,273,333...21,307,198
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FGFR1
fibroblast growth factor receptor 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12194867)
Ensembl MGI
PMID:12194867
GO_REF:0000107
NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904
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FGFR2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
(PMID:10934262)
MGI
PMID:10934262
NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815
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FOXI1
forkhead box I1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12642503)
Ensembl MGI
PMID:12642503
GO_REF:0000107
NCBI chr 5:165,468,600...165,473,088
Ensembl chr 5:172,228,840...172,232,692
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FRZB
frizzled related protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18991062)
Ensembl MGI
PMID:18991062
GO_REF:0000107
NCBI chr2B:70,106,378...70,139,333
Ensembl chr2B:187,915,579...187,948,855
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FZD3
frizzled class receptor 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16495441)
Ensembl MGI
PMID:16495441
GO_REF:0000107
NCBI chr 8:27,773,699...27,853,980
Ensembl chr 8:24,973,644...25,042,115
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FZD6
frizzled class receptor 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16495441)
Ensembl MGI
PMID:16495441
GO_REF:0000107
NCBI chr 8:99,954,523...99,989,153
Ensembl chr 8:102,110,317...102,144,363
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GATA2
GATA binding protein 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20652952)
Ensembl MGI
PMID:20652952
GO_REF:0000107
NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035
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GATA3
GATA binding protein 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21553382) (PMID:11135239)
Ensembl MGI
PMID:11135239 PMID:21553382
GO_REF:0000107
NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
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GBX2
gastrulation brain homeobox 2
acts_upstream_of_or_within
ISO
(PMID:15829521), (PMID:15996652)
MGI
PMID:15829521 PMID:15996652
NCBI chr2B:123,392,499...123,399,549
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GFI1
growth factor independent 1 transcriptional repressor
acts_upstream_of_or_within
ISO
(PMID:12441305)
MGI
PMID:12441305
NCBI chr 1:95,139,171...95,151,054
Ensembl chr 1:93,876,245...93,883,528
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HMX2
H6 family homeobox 2
acts_upstream_of_or_within
ISO
(PMID:15363417) (PMID:11748138)
MGI
PMID:11748138 PMID:15363417
NCBI chr10:119,700,416...119,708,444
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HMX3
H6 family homeobox 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15363417) (PMID:9435283)
Ensembl MGI
PMID:9435283 PMID:15363417
GO_REF:0000107
NCBI chr10:119,693,787...119,697,408
Ensembl chr10:123,968,996...123,970,486
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HOXA1
homeobox A1
acts_upstream_of_or_within
ISO
(PMID:15367676)
MGI
PMID:15367676
NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747
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INSIG1
insulin induced gene 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16955138)
Ensembl MGI
PMID:16955138
GO_REF:0000107
NCBI chr 7:146,893,730...146,906,329
Ensembl chr 7:158,619,531...158,632,012
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INSIG2
insulin induced gene 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16955138)
Ensembl MGI
PMID:16955138
GO_REF:0000107
NCBI chr2B:5,046,971...5,068,757
Ensembl chr2B:118,632,402...118,652,647
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ITGA8
integrin subunit alpha 8
acts_upstream_of_or_within
ISO
(PMID:10742111)
MGI
PMID:10742111
NCBI chr10:15,838,320...16,045,206
Ensembl chr10:16,114,999...16,321,360
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KCNQ1
potassium voltage-gated channel subfamily Q member 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:2,469,750...2,874,467
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KCNQ4
potassium voltage-gated channel subfamily Q member 4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16437162)
Ensembl MGI
PMID:16437162
GO_REF:0000107
NCBI chr 1:40,076,552...40,133,913
Ensembl chr 1:41,396,111...41,452,780
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LOC100971960
unconventional myosin-XV
acts_upstream_of_or_within
ISO
(PMID:11718241), (PMID:14724386)
MGI
PMID:11718241 PMID:14724386
NCBI chr17:32,661,499...32,723,320
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LOC100972110
proton channel OTOP1-like
involved_in
IEA
TreeGrafter
GO_REF:0000118
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LOC100981746
homeobox protein SIX4
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15788460)
Ensembl MGI
PMID:15788460
GO_REF:0000107
NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
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LOC100983880
cadherin-23
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:7610888) (PMID:15925194)
MGI Ensembl
PMID:7610888 PMID:15925194
GO_REF:0000107 MGI:61210
NCBI chr10:67,866,979...68,286,008
Ensembl chr10:70,434,801...70,810,240
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LOC100990531
uncharacterized LOC100990531
acts_upstream_of_or_within
ISO
(PMID:16691564)
MGI
PMID:16691564
NCBI chr14:9,545,147...9,572,309
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MAFB
MAF bZIP transcription factor B
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16325169)
Ensembl MGI
PMID:16325169
GO_REF:0000107
NCBI chr20:37,023,988...37,027,446
Ensembl chr20:38,127,722...38,128,693
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MYO6
myosin VI
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:7493015)
TreeGrafter MGI
PMID:7493015
GO_REF:0000118
NCBI chr 6:73,593,794...73,764,352
Ensembl chr 6:76,951,634...77,048,796
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MYO7A
myosin VIIA
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11753415) (PMID:15389316) (PMID:5795329)
Ensembl MGI
PMID:5795329 PMID:11753415 PMID:15389316
GO_REF:0000107
NCBI chr11:72,187,024...72,265,931
Ensembl chr11:75,834,185...75,907,752
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NEUROG1
neurogenin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16145671)
Ensembl MGI
PMID:16145671
GO_REF:0000107
NCBI chr 5:130,922,727...130,924,403
Ensembl chr 5:137,064,339...137,065,052
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NR4A3
nuclear receptor subfamily 4 group A member 3
acts_upstream_of_or_within
ISO
(PMID:11784868)
MGI
PMID:11784868
NCBI chr 9:70,907,056...70,950,221
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NTN1
netrin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17616930)
Ensembl MGI
PMID:17616930
GO_REF:0000107
NCBI chr17:42,409,797...42,631,930
Ensembl chr17:47,152,225...47,368,134
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OTOP1
otopetrin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12651873)
TreeGrafter MGI
PMID:12651873
GO_REF:0000118
Ensembl chr 4:4,269,521...4,307,585
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OTX1
orthodenticle homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10225993)
Ensembl MGI
PMID:10225993
GO_REF:0000107
NCBI chr2A:63,125,700...63,133,702
Ensembl chr2A:64,255,217...64,262,221
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OTX2
orthodenticle homeobox 2
acts_upstream_of_or_within
ISO
(PMID:10225993)
MGI
PMID:10225993
NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012
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PAX2
paired box 2
involved_in acts_upstream_of_or_within
ISO
(MGI:4822275|PMID:20727173) (PMID:15242798) (PMID:16916509) (MGI:84247|PMID:8951055)
UniProt MGI DFLAT
PMID:8951055 PMID:15242798 PMID:16916509 PMID:20727173
MGI:4822275 MGI:84247
NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
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PAX8
paired box 8
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
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POU4F3
POU class 4 homeobox 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12585968)
Ensembl MGI
PMID:12585968
GO_REF:0000107
NCBI chr 5:141,786,048...141,789,078
Ensembl chr 5:147,800,924...147,802,420
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PRRX1
paired related homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9729491)
Ensembl MGI
PMID:9729491
GO_REF:0000107
NCBI chr 1:146,151,633...146,227,926
Ensembl chr 1:149,867,634...149,943,810
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PRRX2
paired related homeobox 2
acts_upstream_of_or_within
ISO
(PMID:9729491)
MGI
PMID:9729491
NCBI chr 9:100,792,324...100,849,923
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PTPRQ
protein tyrosine phosphatase receptor type Q
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:14534255)
Ensembl MGI
PMID:14534255
GO_REF:0000107
NCBI chr12:77,957,758...78,200,206
Ensembl chr12:81,068,545...81,310,857
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ROR2
receptor tyrosine kinase like orphan receptor 2
acts_upstream_of_or_within
ISO
(PMID:18606138)
MGI
PMID:18606138
NCBI chr 9:62,782,183...63,005,626
Ensembl chr 9:90,851,983...90,965,084
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SIX1
SIX homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15788460)
Ensembl MGI
PMID:15788460
GO_REF:0000107
NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
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SLITRK6
SLIT and NTRK like family member 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19936227)
Ensembl MGI
PMID:19936227
GO_REF:0000107
NCBI chr13:66,990,025...67,003,900
Ensembl chr13:86,161,905...86,164,430
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SOBP
sine oculis binding protein homolog
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16962269)
Ensembl MGI TreeGrafter
PMID:16962269
GO_REF:0000107 GO_REF:0000118
NCBI chr 6:105,302,531...105,472,674
Ensembl chr 6:109,168,069...109,337,549
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SOX2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:15846349)
MGI
PMID:15846349
NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662
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SPRY2
sprouty RTK signaling antagonist 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15809037)
Ensembl MGI
PMID:15809037
GO_REF:0000107
NCBI chr13:61,569,658...61,574,817
Ensembl chr13:80,596,346...80,597,408
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TBX1
T-box transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:15084464) (PMID:12913075) (PMID:16600992) (PMID:15652707)
MGI
PMID:12913075 PMID:15084464 PMID:15652707 PMID:16600992
NCBI chr22:2,521,080...2,541,267
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TBX3
T-box transcription factor 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr12:112,240,050...112,254,299
Ensembl chr12:115,620,002...115,631,316
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TFAP2A
transcription factor AP-2 alpha
involved_in
ISO
(PMID:21204207)
UniProt
PMID:21204207
NCBI chr 6:10,237,834...10,260,843
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TIFAB
TIFA inhibitor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:130,836,697...130,846,050
Ensembl chr 5:136,983,040...136,983,525
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TMIE
transmembrane inner ear
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12140191)
TreeGrafter MGI
PMID:12140191
GO_REF:0000118
NCBI chr 3:46,590,527...46,608,981
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USH1C
USH1 protein network component harmonin
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:14519688)
TreeGrafter MGI
PMID:14519688
GO_REF:0000118
NCBI chr11:17,548,501...17,598,923
Ensembl chr11:17,233,854...17,284,256
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USH1G
USH1 protein network component sans
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12588793), (PMID:1927362)
Ensembl MGI
PMID:1927362 PMID:12588793
GO_REF:0000107
NCBI chr17:68,861,622...68,868,822
Ensembl chr17:74,419,769...74,424,794
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WNT1
Wnt family member 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15961523)
Ensembl MGI
PMID:15961523
GO_REF:0000107
NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583
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WNT3A
Wnt family member 3A
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15961523)
Ensembl MGI
PMID:15961523
GO_REF:0000107
NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469
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WNT5A
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18991062)
Ensembl MGI
PMID:18991062
GO_REF:0000107
NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
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RAC1
Rac family small GTPase 1
acts_upstream_of_or_within
ISO
(PMID:20016102)
MGI
PMID:20016102
NCBI chr 7:7,039,379...7,068,866
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SCRIB
scribble planar cell polarity protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20215345)
Ensembl MGI
PMID:20215345
GO_REF:0000107
NCBI chr 8:140,544,797...140,571,078
Ensembl chr 8:143,557,722...143,582,353
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SEC24B
SEC24 homolog B, COPII coat complex component
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20215345)
Ensembl MGI
PMID:20215345
GO_REF:0000107
NCBI chr 4:101,937,119...102,043,038
Ensembl chr 4:112,534,779...112,628,065
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SLITRK6
SLIT and NTRK like family member 6
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19936227)
Ensembl MGI
PMID:19936227
GO_REF:0000107
NCBI chr13:66,990,025...67,003,900
Ensembl chr13:86,161,905...86,164,430
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WDPCP
WD repeat containing planar cell polarity effector
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24302887)
Ensembl MGI
PMID:24302887
GO_REF:0000107
NCBI chr2A:63,180,279...63,658,804
Ensembl chr2A:64,325,379...64,785,256
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ANKRD24
ankyrin repeat domain 24
involved_in
ISO
(MGI:6885507|PMID:35175278)
UniProt
PMID:35175278
MGI:6885507
NCBI chr19:3,206,152...3,246,886
G
ATP2B2
ATPase plasma membrane Ca2+ transporting 2
acts_upstream_of_or_within
ISO
(PMID:11875276)
MGI
PMID:11875276
NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006
G
CLIC5
chloride intracellular channel 5
acts_upstream_of_or_within
ISO
(PMID:17021174)
MGI
PMID:17021174
NCBI chr 6:45,474,797...45,592,407
Ensembl chr 6:46,753,013...46,934,100
G
CLRN1
clarin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19414487), (PMID:19423712)
Ensembl MGI
PMID:19414487 PMID:19423712
GO_REF:0000107
NCBI chr 3:147,954,124...148,000,895
Ensembl chr 3:155,526,011...155,573,684
G
CLRN2
clarin 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:11,933,869...11,948,049
Ensembl chr 4:17,228,544...17,240,743
G
GRXCR2
glutaredoxin and cysteine rich domain containing 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:30380417)
Ensembl MGI
PMID:30380417
GO_REF:0000107
NCBI chr 5:141,309,249...141,322,523
Ensembl chr 5:147,324,358...147,337,633
G
LHFPL5
LHFPL tetraspan subfamily member 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17876667), (PMID:23217710) (PMID:15905332)
Ensembl MGI
PMID:15905332 PMID:17876667 PMID:23217710
GO_REF:0000107
NCBI chr 6:35,367,304...35,389,595
Ensembl chr 6:36,569,008...36,589,102
G
LOC100980308
tubulin-specific chaperone cofactor E-like protein
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:115,867,514...116,038,193
Ensembl chr11:119,873,943...119,961,175 Ensembl chr11:119,873,943...119,961,175
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LOC100983880
cadherin-23
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11138008), (PMID:17050716), (PMID:23217710) (PMID:7610888), (PMID:8790740), (PMID:9039475) (PMID:12121736) (PMID:15537665) (PMID:11322776)
Ensembl MGI
PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 PMID:12121736 PMID:15537665 PMID:17050716 PMID:23217710 More...
GO_REF:0000107
NCBI chr10:67,866,979...68,286,008
Ensembl chr10:70,434,801...70,810,240
G
LOC103785466
stereocilin
involved_in acts_upstream_of_or_within
ISO
(MGI:5430850|PMID:21165971) (PMID:30801007) (PMID:18849963)
UniProt MGI
PMID:18849963 PMID:21165971 PMID:30801007
MGI:5430850
NCBI chr15:22,660,952...22,706,416
Ensembl chr15:40,740,387...40,757,999
G
MYO3A
myosin IIIA
involved_in
ISO
(PMID:26754646)
MGI
PMID:26754646
NCBI chr10:26,104,588...26,389,942
Ensembl chr10:26,469,742...26,754,989
G
MYO3B
myosin IIIB
involved_in
ISO
(PMID:26754646)
MGI
PMID:26754646
NCBI chr2B:57,458,046...57,940,039
Ensembl chr2B:174,975,796...175,398,203
G
MYO7A
myosin VIIA
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17050716) (PMID:11753415) (PMID:12121736)
Ensembl MGI
PMID:11753415 PMID:12121736 PMID:17050716
GO_REF:0000107
NCBI chr11:72,187,024...72,265,931
Ensembl chr11:75,834,185...75,907,752
G
NHERF1
NHERF family PDZ scaffold protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24920589)
Ensembl MGI
PMID:24920589
GO_REF:0000107
NCBI chr17:68,694,468...68,715,157
Ensembl chr17:74,250,406...74,271,234
G
PCDH15
protocadherin related 15
acts_upstream_of_or_within
ISO
(PMID:15537665) (PMID:23217710) (PMID:16887306) (PMID:10978835) (PMID:11124469)
MGI
PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710
NCBI chr10:50,452,290...52,236,538
Ensembl chr10:52,666,969...53,536,611
G
PDZD7
PDZ domain containing 7
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24334608)
Ensembl MGI TreeGrafter
PMID:24334608
GO_REF:0000107 GO_REF:0000118
NCBI chr10:97,608,969...97,632,508
Ensembl chr10:101,085,370...101,107,034
G
PLS1
plastin 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:139,629,825...139,747,080
Ensembl chr 3:147,289,205...147,338,600
G
REST
RE1 silencing transcription factor
involved_in
ISO
(MGI:6193260|PMID:29961578)
UniProt
PMID:29961578
MGI:6193260
NCBI chr 4:66,984,466...67,012,301
Ensembl chr 4:73,526,085...73,582,242
G
RIPOR2
RHO family interacting cell polarization regulator 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:24,642,239...24,768,074
Ensembl chr 6:24,973,412...25,204,745
G
SCRIB
scribble planar cell polarity protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20215345)
Ensembl MGI
PMID:20215345
GO_REF:0000107
NCBI chr 8:140,544,797...140,571,078
Ensembl chr 8:143,557,722...143,582,353
G
SEC24B
SEC24 homolog B, COPII coat complex component
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20215345)
Ensembl MGI
PMID:20215345
GO_REF:0000107
NCBI chr 4:101,937,119...102,043,038
Ensembl chr 4:112,534,779...112,628,065
G
SOD1
superoxide dismutase 1
acts_upstream_of_or_within
ISO
(PMID:10464373), (PMID:10466888)
MGI
PMID:10464373 PMID:10466888
NCBI chr21:18,029,831...18,037,526
G
STRC
stereocilin
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:22,562,313...22,633,064
Ensembl chr15:40,769,539...40,795,723 Ensembl chr15:40,769,539...40,795,723
G
TPRN
taperin
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:30380417)
TreeGrafter MGI
PMID:30380417
GO_REF:0000118
NCBI chr 9:108,251,235...108,261,541
G
TRIOBP
TRIO and F-actin binding protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20510926)
Ensembl MGI
PMID:20510926
GO_REF:0000107
NCBI chr22:18,662,794...18,693,138
Ensembl chr22:36,451,860...36,522,391
G
WHRN
whirlin
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:27117407)
Ensembl MGI TreeGrafter
PMID:27117407
GO_REF:0000107 GO_REF:0000118
NCBI chr 9:85,500,222...85,604,417
Ensembl chr 9:113,863,872...113,966,758
G
CTHRC1
collagen triple helix repeat containing 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18606138)
Ensembl MGI
PMID:18606138
GO_REF:0000107
NCBI chr 8:100,027,417...100,038,945
Ensembl chr 8:102,182,944...102,194,445
G
DCANP1
dendritic cell associated nuclear protein 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:130,838,844...130,839,588
Ensembl chr 5:136,979,950...136,980,694
G
DVL1
dishevelled segment polarity protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16116426)
Ensembl MGI
PMID:16116426
GO_REF:0000107
NCBI chr 1:92,469...106,748
Ensembl chr 1:1,292,052...1,301,008
G
DVL2
dishevelled segment polarity protein 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19008950) (PMID:16116426)
Ensembl MGI
PMID:16116426 PMID:19008950
GO_REF:0000107
NCBI chr17:7,255,241...7,264,452
Ensembl chr17:7,242,493...7,251,571
G
DVL3
dishevelled segment polarity protein 3
acts_upstream_of_or_within
ISO
(PMID:19008950)
MGI
PMID:19008950
NCBI chr 3:181,190,961...181,207,831
Ensembl chr 3:189,674,399...189,693,130
G
EYA1
EYA transcriptional coactivator and phosphatase 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10072433)
Ensembl MGI
PMID:10072433
GO_REF:0000107
NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829
G
FRZB
frizzled related protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17433286)
Ensembl MGI
PMID:17433286
GO_REF:0000107
NCBI chr2B:70,106,378...70,139,333
Ensembl chr2B:187,915,579...187,948,855
G
FZD2
frizzled class receptor 2
acts_upstream_of_or_within
ISO
(PMID:20940229)
MGI
PMID:20940229
NCBI chr17:12,839,362...12,843,803
G
GLI2
GLI family zinc finger 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17395647)
Ensembl MGI
PMID:17395647
GO_REF:0000107
NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442
G
GRHL3
grainyhead like transcription factor 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20643356)
Ensembl MGI
PMID:20643356
GO_REF:0000107
NCBI chr 1:23,519,911...23,558,105
Ensembl chr 1:24,502,294...24,547,152
G
HOXA1
homeobox A1
involved_in
ISO
(PMID:16155570)
DFLAT
PMID:16155570
NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747
G
HPN
hepsin
involved_in
ISO
(MGI:5306554|PMID:20683358)
UniProt
PMID:20683358
MGI:5306554
NCBI chr19:31,985,761...32,012,841
Ensembl chr19:40,725,319...40,750,628
G
MYO3A
myosin IIIA
involved_in
ISO
(MGI:5766107|PMID:26754646)
UniProt
PMID:26754646
MGI:5766107
NCBI chr10:26,104,588...26,389,942
Ensembl chr10:26,469,742...26,754,989
G
MYO3B
myosin IIIB
involved_in
ISO
(MGI:5766107|PMID:26754646)
UniProt
PMID:26754646
MGI:5766107
NCBI chr2B:57,458,046...57,940,039
Ensembl chr2B:174,975,796...175,398,203
G
NEUROG1
neurogenin 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:130,922,727...130,924,403
Ensembl chr 5:137,064,339...137,065,052
G
PAX2
paired box 2
involved_in acts_upstream_of_or_within
ISO
(MGI:84247|PMID:8951055) (PMID:16916509) (MGI:4822275|PMID:20727173)
DFLAT MGI UniProt
PMID:8951055 PMID:16916509 PMID:20727173
MGI:4822275 MGI:84247
NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
G
POU3F4
POU class 3 homeobox 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr X:72,563,887...72,568,233
Ensembl chr X:82,666,757...82,667,842
G
PTK7
protein tyrosine kinase 7 (inactive)
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20704721)
Ensembl MGI
PMID:20704721
GO_REF:0000107
NCBI chr 6:42,668,077...42,753,547
Ensembl chr 6:43,962,560...44,051,146
G
RAC1
Rac family small GTPase 1
acts_upstream_of_or_within
ISO
(PMID:20016102)
MGI
PMID:20016102
NCBI chr 7:7,039,379...7,068,866
G
SIX1
SIX homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12874121)
Ensembl MGI
PMID:12874121
GO_REF:0000107
NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
G
SOX9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
(PMID:20346939)
MGI
PMID:20346939
NCBI chr17:66,028,737...66,034,122
G
TBX1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISO
(MGI:5284768|PMID:18231833) (PMID:17825816)
UniProt MGI
PMID:17825816 PMID:18231833
MGI:5284768
NCBI chr22:2,521,080...2,541,267
G
TBX18
T-box transcription factor 18
acts_upstream_of_or_within
ISO
(PMID:18353863)
MGI
PMID:18353863
NCBI chr 6:82,621,987...82,654,137
Ensembl chr 6:85,862,810...85,938,799
G
TBX2
T-box transcription factor 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:55,501,932...55,511,537
Ensembl chr17:60,622,098...60,630,189
G
TIFAB
TIFA inhibitor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:130,836,697...130,846,050
Ensembl chr 5:136,983,040...136,983,525
G
TSHR
thyroid stimulating hormone receptor
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10575115)
Ensembl MGI
PMID:10575115
GO_REF:0000107
NCBI chr14:61,517,767...61,708,241
Ensembl chr14:80,718,433...80,905,890
G
VANGL2
VANGL planar cell polarity protein 2
acts_upstream_of_or_within
ISO
(PMID:16116426), (PMID:18606138) (PMID:17433286) (PMID:19008950) (PMID:20940229) (PMID:20643356)
MGI
PMID:16116426 PMID:17433286 PMID:18606138 PMID:19008950 PMID:20643356 PMID:20940229 More...
NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281
G
WNT5A
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17433286)
Ensembl MGI
PMID:17433286
GO_REF:0000107
NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
G
ZEB1
zinc finger E-box binding homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21980308)
Ensembl MGI
PMID:21980308
GO_REF:0000107
NCBI chr10:31,449,202...31,659,534
Ensembl chr10:32,046,491...32,253,550
G
FGF10
fibroblast growth factor 10
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:14623822)
Ensembl MGI
PMID:14623822
GO_REF:0000107
NCBI chr 5:65,979,443...66,069,314
Ensembl chr 5:71,028,187...71,111,706
G
FGF3
fibroblast growth factor 3
acts_upstream_of_or_within
ISO
(PMID:17601531)
MGI
PMID:17601531
NCBI chr11:64,905,658...64,915,175
Ensembl chr11:68,197,962...68,207,042
G
FGF8
fibroblast growth factor 8
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17601531)
Ensembl MGI
PMID:17601531
GO_REF:0000107
NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916
G
FGFR2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
(PMID:9435295)
MGI
PMID:9435295
NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815
G
HESX1
HESX homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:9620767)
Ensembl MGI
PMID:9620767
GO_REF:0000107
NCBI chr 3:57,131,419...57,161,205
Ensembl chr 3:58,341,965...58,370,347
G
SOX9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
(PMID:18377888)
MGI
PMID:18377888
NCBI chr17:66,028,737...66,034,122
G
TCAP
titin-cap
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:17,622,318...17,625,252
Ensembl chr17:17,839,139...17,842,727
G
EYA1
EYA transcriptional coactivator and phosphatase 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16916509)
Ensembl MGI
PMID:16916509
GO_REF:0000107
NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829
G
TBX1
T-box transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:17074316)
MGI
PMID:17074316
NCBI chr22:2,521,080...2,541,267
G
BLOC1S5
biogenesis of lysosomal organelles complex 1 subunit 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:5367369)
Ensembl MGI
PMID:5367369
GO_REF:0000107
NCBI chr 6:7,852,340...7,902,880
Ensembl chr 6:8,133,721...8,184,194
G
LRIG1
leucine rich repeats and immunoglobulin like domains 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24086156)
Ensembl MGI
PMID:24086156
GO_REF:0000107
NCBI chr 3:66,271,849...66,394,056
Ensembl chr 3:67,644,289...67,765,194
G
LRIG3
leucine rich repeats and immunoglobulin like domains 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24086156)
Ensembl MGI
PMID:24086156
GO_REF:0000107
NCBI chr12:30,012,251...30,060,570
Ensembl chr12:30,275,498...30,323,358
G
TTC39C
tetratricopeptide repeat domain 39C
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr18:17,267,608...17,388,826
Ensembl chr18:20,891,500...21,011,248
G
STOX1
storkhead box 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr10:65,304,649...65,359,501
Ensembl chr10:67,882,654...67,894,039
G
HOXA1
homeobox A1
involved_in
ISO
(PMID:16155570)
DFLAT
PMID:16155570
NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747
G
FGF10
fibroblast growth factor 10
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:15765517)
Ensembl MGI
PMID:15765517
GO_REF:0000107
NCBI chr 5:65,979,443...66,069,314
Ensembl chr 5:71,028,187...71,111,706
G
CHD7
chromodomain helicase DNA binding protein 7
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19855134)
Ensembl MGI
PMID:19855134
GO_REF:0000107
NCBI chr 8:57,091,002...57,282,471
Ensembl chr 8:58,816,840...58,945,186
G
EYA1
EYA transcriptional coactivator and phosphatase 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:10072433)
Ensembl MGI
PMID:10072433
GO_REF:0000107
NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829
G
FGF10
fibroblast growth factor 10
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17601531)
Ensembl MGI
PMID:17601531
GO_REF:0000107
NCBI chr 5:65,979,443...66,069,314
Ensembl chr 5:71,028,187...71,111,706
G
FGF3
fibroblast growth factor 3
acts_upstream_of_or_within
ISO
(PMID:17601531)
MGI
PMID:17601531
NCBI chr11:64,905,658...64,915,175
Ensembl chr11:68,197,962...68,207,042
G
NR4A3
nuclear receptor subfamily 4 group A member 3
acts_upstream_of_or_within
ISO
(PMID:11784868)
MGI
PMID:11784868
NCBI chr 9:70,907,056...70,950,221
G
TBX1
T-box transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:19855134)
MGI
PMID:19855134
NCBI chr22:2,521,080...2,541,267
G
TBX3
T-box transcription factor 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr12:112,240,050...112,254,299
Ensembl chr12:115,620,002...115,631,316
G
ZEB1
zinc finger E-box binding homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:21980308)
Ensembl MGI
PMID:21980308
GO_REF:0000107
NCBI chr10:31,449,202...31,659,534
Ensembl chr10:32,046,491...32,253,550
G
PTPRQ
protein tyrosine phosphatase receptor type Q
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:22357859)
Ensembl MGI
PMID:22357859
GO_REF:0000107
NCBI chr12:77,957,758...78,200,206
Ensembl chr12:81,068,545...81,310,857
G
PLS1
plastin 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:139,629,825...139,747,080
Ensembl chr 3:147,289,205...147,338,600
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