ONTOLOGY REPORT - ANNOTATIONS
Term: auditory receptor cell stereocilium organization
Accession: GO:0060088
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Definition: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells.
Synonyms: exact_synonym: auditory receptor cell stereocilium organisation
related_synonym: auditory receptor cell stereocilium organization and biogenesis
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ANKRD24
ankyrin repeat domain 24
involved_in
ISO
(PMID:35175278)
UniProt
PMID:35175278
NCBI chr19:3,206,152...3,246,886
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ATP2B2
ATPase plasma membrane Ca2+ transporting 2
acts_upstream_of_or_within
ISO
(PMID:11875276)
MGI
PMID:11875276
NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006
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CLIC5
chloride intracellular channel 5
acts_upstream_of_or_within
ISO
(PMID:17021174)
MGI
PMID:17021174
NCBI chr 6:45,474,797...45,592,407
Ensembl chr 6:46,753,013...46,934,100
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CLRN1
clarin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19414487), (PMID:19423712)
Ensembl MGI
PMID:19414487 PMID:19423712
GO_REF:0000107
NCBI chr 3:147,954,124...148,000,895
Ensembl chr 3:155,526,011...155,573,684
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CLRN2
clarin 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:11,933,869...11,948,049
Ensembl chr 4:17,228,544...17,240,743
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GRXCR1
glutaredoxin and cysteine rich domain containing 1
acts_upstream_of_or_within
ISO
(PMID:35235570)
MGI
PMID:35235570
NCBI chr 4:37,214,515...37,352,195
Ensembl chr 4:43,063,313...43,200,436
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GRXCR2
glutaredoxin and cysteine rich domain containing 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:30380417)
Ensembl MGI
PMID:30380417
GO_REF:0000107
NCBI chr 5:141,309,249...141,322,523
Ensembl chr 5:147,324,358...147,337,633
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LHFPL5
LHFPL tetraspan subfamily member 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17876667), (PMID:23217710) (PMID:15905332)
Ensembl MGI
PMID:15905332 PMID:17876667 PMID:23217710
GO_REF:0000107
NCBI chr 6:35,367,304...35,389,595
Ensembl chr 6:36,569,008...36,589,102
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LOC100980308
tubulin-specific chaperone cofactor E-like protein
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:115,867,514...116,038,193
Ensembl chr11:119,873,943...119,961,175 Ensembl chr11:119,873,943...119,961,175
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LOC100983880
cadherin-23
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11138008), (PMID:17050716), (PMID:23217710) (PMID:7610888), (PMID:8790740), (PMID:9039475) (PMID:12121736) (PMID:15537665) (PMID:11322776)
Ensembl MGI
PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 PMID:12121736 PMID:15537665 PMID:17050716 PMID:23217710 More...
GO_REF:0000107
NCBI chr10:67,866,979...68,286,008
Ensembl chr10:70,434,801...70,810,240
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LOC103785466
stereocilin
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:18849963) (PMID:30801007)
MGI Ensembl
PMID:18849963 PMID:30801007
GO_REF:0000107
NCBI chr15:22,660,952...22,706,416
Ensembl chr15:40,740,387...40,757,999
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MYO3A
myosin IIIA
involved_in
ISO
(PMID:26754646)
MGI
PMID:26754646
NCBI chr10:26,104,588...26,389,942
Ensembl chr10:26,469,742...26,754,989
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MYO3B
myosin IIIB
involved_in
ISO
(PMID:26754646)
MGI
PMID:26754646
NCBI chr2B:57,458,046...57,940,039
Ensembl chr2B:174,975,796...175,398,203
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MYO7A
myosin VIIA
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17050716) (PMID:11753415) (PMID:12121736)
Ensembl MGI
PMID:11753415 PMID:12121736 PMID:17050716
GO_REF:0000107
NCBI chr11:72,187,024...72,265,931
Ensembl chr11:75,834,185...75,907,752
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NHERF1
NHERF family PDZ scaffold protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24920589)
Ensembl MGI
PMID:24920589
GO_REF:0000107
NCBI chr17:68,694,468...68,715,157
Ensembl chr17:74,250,406...74,271,234
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PCDH15
protocadherin related 15
acts_upstream_of_or_within
ISO
(PMID:15537665) (PMID:23217710) (PMID:16887306) (PMID:10978835) (PMID:11124469)
MGI
PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710
NCBI chr10:50,452,290...52,236,538
Ensembl chr10:52,666,969...53,536,611
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PDZD7
PDZ domain containing 7
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24334608)
Ensembl MGI TreeGrafter
PMID:24334608
GO_REF:0000107 GO_REF:0000118
NCBI chr10:97,608,969...97,632,508
Ensembl chr10:101,085,370...101,107,034
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PLS1
plastin 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:139,629,825...139,747,080
Ensembl chr 3:147,289,205...147,338,600
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REST
RE1 silencing transcription factor
involved_in
ISO
(PMID:29961578)
UniProt
PMID:29961578
NCBI chr 4:66,984,466...67,012,301
Ensembl chr 4:73,526,085...73,582,242
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RIPOR2
RHO family interacting cell polarization regulator 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:24,642,239...24,768,074
Ensembl chr 6:24,973,412...25,204,745
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SCRIB
scribble planar cell polarity protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20215345)
Ensembl MGI
PMID:20215345
GO_REF:0000107
NCBI chr 8:140,544,797...140,571,078
Ensembl chr 8:143,557,722...143,582,353
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SEC24B
SEC24 homolog B, COPII coat complex component
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20215345)
Ensembl MGI
PMID:20215345
GO_REF:0000107
NCBI chr 4:101,937,119...102,043,038
Ensembl chr 4:112,534,779...112,628,065
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SOD1
superoxide dismutase 1
acts_upstream_of_or_within
ISO
(PMID:10464373), (PMID:10466888)
MGI
PMID:10464373 PMID:10466888
NCBI chr21:18,029,831...18,037,526
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STRC
stereocilin
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:22,562,313...22,633,064
Ensembl chr15:40,769,539...40,795,723 Ensembl chr15:40,769,539...40,795,723
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TPRN
taperin
acts_upstream_of_or_within
ISO
(PMID:30380417)
MGI
PMID:30380417
NCBI chr 9:108,251,235...108,261,541
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TRIOBP
TRIO and F-actin binding protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20510926)
Ensembl MGI
PMID:20510926
GO_REF:0000107
NCBI chr22:18,662,794...18,693,138
Ensembl chr22:36,451,860...36,522,391
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WHRN
whirlin
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:27117407)
Ensembl TreeGrafter MGI
PMID:27117407
GO_REF:0000107 GO_REF:0000118
NCBI chr 9:85,500,222...85,604,417
Ensembl chr 9:113,863,872...113,966,758
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