ONTOLOGY REPORT - ANNOTATIONS |
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Term: | cochlea morphogenesis |
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Accession: | GO:0090103
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browse the term
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Definition: | The process in which the cochlea is generated and organized. |
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Cthrc1 |
collagen triple helix repeat containing 1 |
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ISO |
MGI:1915838 (MGI:3814781|PMID:18606138) |
RGD |
PMID:18606138 |
MGI:3814781 |
NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
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Dvl1 |
dishevelled segment polarity protein 1 |
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ISO |
MGI:106613 (MGI:3589836|PMID:16116426) |
RGD |
PMID:16116426 |
MGI:3589836 |
NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
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Dvl2 |
dishevelled segment polarity protein 2 |
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ISO |
MGI:108100|MGI:94941 (MGI:3589836|PMID:16116426), (MGI:3821448|PMID:19008950) |
RGD |
PMID:16116426 PMID:19008950 |
MGI:3589836 MGI:3821448 |
NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
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Dvl3 |
dishevelled segment polarity protein 3 |
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ISO |
MGI:106613|MGI:2135272 (MGI:3821448|PMID:19008950) |
RGD |
PMID:19008950 |
MGI:3821448 |
NCBI chr11:84,051,177...84,068,479
Ensembl chr11:84,051,078...84,068,302
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Eya1 |
EYA transcriptional coactivator and phosphatase 1 |
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ISO |
MGI:1857803 (MGI:1335261|PMID:10072433) |
RGD |
PMID:10072433 |
MGI:1335261 |
NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
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Frzb |
frizzled-related protein |
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ISO |
MGI:98958 (MGI:3714704|PMID:17433286) |
RGD |
PMID:17433286 |
MGI:3714704 |
NCBI chr 3:67,635,604...67,668,772
Ensembl chr 3:67,635,607...67,668,772
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Fzd2 |
frizzled class receptor 2 |
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IEA ISO |
GO_REF:0000107 MGI:2135272 (MGI:4837757|PMID:20940229) |
Ensembl RGD |
PMID:20940229 |
GO_REF:0000107 MGI:4837757 |
NCBI chr10:90,550,147...90,552,057
Ensembl chr10:90,550,147...90,552,057
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Gli2 |
GLI family zinc finger 2 |
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ISO |
MGI:1857509 (MGI:3709667|PMID:17395647) |
RGD |
PMID:17395647 |
MGI:3709667 |
NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
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Grhl3 |
grainyhead-like transcription factor 3 |
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ISO |
MGI:2135272 (MGI:4819429|PMID:20643356) |
RGD |
PMID:20643356 |
MGI:4819429 |
NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896
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Hoxa1 |
homeobox A1 |
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ISO |
(PMID:16155570) |
RGD |
PMID:16155570 |
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NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
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Hpn |
hepsin |
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ISS ISO |
GO_REF:0000024 (MGI:5306554|PMID:20683358) |
UniProt RGD |
PMID:20683358 |
GO_REF:0000024 MGI:5306554 |
NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967
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Myo3a |
myosin IIIA |
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ISO |
(MGI:5766107|PMID:26754646) |
RGD |
PMID:26754646 |
MGI:5766107 |
NCBI chr17:88,952,635...89,167,538
Ensembl chr17:88,963,981...89,167,018
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Myo3b |
myosin IIIB |
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ISO |
(MGI:5766107|PMID:26754646) |
RGD |
PMID:26754646 |
MGI:5766107 |
NCBI chr 3:56,355,433...56,717,740
Ensembl chr 3:56,355,431...56,584,547
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Neurog1 |
neurogenin 1 |
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ISO |
UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) |
RGD |
PMID:23419067 |
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NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
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Pax2 |
paired box 2 |
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ISS ISO |
GO_REF:0000024 MGI:1857673|UniProtKB:Q00288 (MGI:3702803|PMID:16916509), (MGI:4822275|PMID:20727173), (MGI:84247|PMID:8951055) |
UniProt RGD |
PMID:8951055 PMID:16916509 PMID:20727173 |
GO_REF:0000024 MGI:3702803 MGI:4822275 MGI:84247 |
NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
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Pou3f4 |
POU class 3 homeobox 4 |
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ISS ISO |
GO_REF:0000024 UniProtKB:P70323 (MGI:5284768|PMID:18231833) |
UniProt RGD |
PMID:18231833 |
GO_REF:0000024 MGI:5284768 |
NCBI chr X:82,143,789...82,145,066
Ensembl chr X:82,143,789...82,145,066
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Ptk7 |
protein tyrosine kinase 7 |
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ISO |
MGI:3640803 (MGI:4830023|PMID:20704721) |
RGD |
PMID:20704721 |
MGI:4830023 |
NCBI chr 9:16,662,588...16,729,888
Ensembl chr 9:16,702,460...16,729,030
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Rac1 |
Rac family small GTPase 1 |
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ISO |
MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) |
RGD |
PMID:20016102 |
MGI:4430014 |
NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
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Six1 |
SIX homeobox 1 |
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ISO |
MGI:2655195 (MGI:2671031|PMID:12874121) |
RGD |
PMID:12874121 |
MGI:2671031 |
NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
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Sox9 |
SRY-box transcription factor 9 |
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ISS ISO |
GO_REF:0000024 MGI:2385468|MGI:3841145 (MGI:4454502|PMID:20346939) |
UniProt RGD |
PMID:20346939 |
GO_REF:0000024 MGI:4454502 |
NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
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Tbx1 |
T-box transcription factor 1 |
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ISS ISO |
GO_REF:0000024 MGI:2179136|UniProtKB:P62515 (MGI:3765363|PMID:17825816), (MGI:5284768|PMID:18231833) |
UniProt RGD |
PMID:17825816 PMID:18231833 |
GO_REF:0000024 MGI:3765363 MGI:5284768 |
NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
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Tbx18 |
T-box transcription factor 18 |
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ISO |
MGI:3044915 (MGI:3788971|PMID:18353863) |
RGD |
PMID:18353863 |
MGI:3788971 |
NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363
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Tifab |
TIFA inhibitor |
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ISO |
UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) |
RGD |
PMID:23419067 |
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NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
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Tshr |
thyroid stimulating hormone receptor |
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IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr 6:115,170,290...115,306,871
Ensembl chr 6:115,170,865...115,306,871
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Tshr-ps1 |
thyroid stimulating hormone receptor, pseudogene 1 |
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ISO |
(MGI:3652455|PMID:10575115) |
RGD |
PMID:10575115 |
MGI:3652455 |
NCBI chr 4:93,447,412...93,448,194
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Vangl2 |
VANGL planar cell polarity protein 2 |
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ISO |
MGI:108100|MGI:1857642|MGI:1888513|MGI:2655333|MGI:98958 (MGI:3589836|PMID:16116426), (MGI:3714704|PMID:17433286), (MGI:3814781|PMID:18606138), (MGI:3821448|PMID:19008950), (MGI:4819429|PMID:20643356), (MGI:4837757|PMID:20940229) |
RGD |
PMID:16116426 PMID:17433286 PMID:18606138 PMID:19008950 PMID:20643356 PMID:20940229 |
MGI:3589836 MGI:3714704 MGI:3814781 MGI:3821448 MGI:4819429 MGI:4837757 |
NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
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Wnt5a |
Wnt family member 5A |
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IEA ISO |
GO_REF:0000107 MGI:1857617|MGI:2135272 (MGI:3714704|PMID:17433286) |
Ensembl RGD |
PMID:17433286 |
GO_REF:0000107 MGI:3714704 |
NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
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Zeb1 |
zinc finger E-box binding homeobox 1 |
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IEA ISO |
GO_REF:0000107 MGI:1861230 (MGI:5294688|PMID:21980308) |
Ensembl RGD |
PMID:21980308 |
GO_REF:0000107 MGI:5294688 |
NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914
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