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ONTOLOGY REPORT - ANNOTATIONS

Term:embryo development
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Accession:GO:0009790 term browser browse the term
Definition:The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant.
Synonyms:exact_synonym: embryogenesis;   embryonal development
 broad_synonym: embryogenesis and morphogenesis
 alt_id: GO:0009795
 xref: Wikipedia:Embryogenesis


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activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3716756 (PMID:17317769)		 Ensembl
RGD		 PMID:17317769 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
anterior neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 acts_upstream_of_or_within ISO MGI:5056374 (PMID:21515572) RGD PMID:21515572 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648 		JBrowse link
G Folr1 folate receptor alpha involved_in ISO (MGI:3721767|PMID:17286298) RGD PMID:17286298 MGI:3721767 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:5056365 (PMID:21515572) RGD PMID:21515572 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1-like acts_upstream_of_or_within ISO MGI:4124253|MGI:4128888 (PMID:26787558) RGD PMID:26787558 NCBI chr20:13,337,983...13,443,665
Ensembl chr20:13,339,692...13,443,665 		JBrowse link
anterior neuropore closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) RGD PMID:17565372 NCBI chr16:19,429,578...19,520,320
Ensembl chr16:19,429,578...19,519,587 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:1888387 (PMID:8622765) RGD PMID:8622765 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
anterior/posterior axis specification, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cripto cripto, EGF-CFC family member acts_upstream_of_or_within ISO MGI:1934206 (PMID:9790191) RGD PMID:9790191 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308 		JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within ISO MGI:3580390 (PMID:15870281) RGD PMID:15870281 NCBI chr 7:52,711,255...52,792,738
Ensembl chr 7:52,711,257...52,792,743 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO
IEA		 (PMID:9054360)
GO_REF:0000107		 RGD
Ensembl		 PMID:9054360 GO_REF:0000107 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Tasor transcription activation suppressor involved_in ISO (MGI:6109647|PMID:28839193) RGD PMID:28839193 MGI:6109647 NCBI chr16:2,606,807...2,669,902
Ensembl chr16:2,603,936...2,667,292 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9207801)		 UniProt
RGD		 PMID:9207801 GO_REF:0000024 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO MGI:3044616 (PMID:14668413) RGD PMID:14668413 NCBI chr 4:104,680,734...104,846,086
Ensembl chr 4:104,680,739...104,845,287 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA		 (MGI:4835157|PMID:9054360)
GO_REF:0000107		 RGD
Ensembl		 PMID:9054360 GO_REF:0000107 MGI:4835157 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1197519 (PMID:15967824) RGD PMID:15967824 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bcl2l11 Bcl2-like 11 acts_upstream_of_or_within ISO MGI:99702 (PMID:15967824) RGD PMID:15967824 NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1933835|MGI:2158470 (PMID:16245338) RGD PMID:16245338 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir96 microRNA 96 acts_upstream_of_or_within ISO MGI:4354110 (PMID:19363478) RGD PMID:19363478 NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (PMID:20016102) RGD PMID:20016102 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (PMID:20215345) RGD PMID:20215345 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (PMID:20215345) RGD PMID:20215345 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (PMID:19936227) RGD PMID:19936227 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5558098 (PMID:24302887)		 Ensembl
RGD		 PMID:24302887 GO_REF:0000107 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113 		JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd24 ankyrin repeat domain 24 involved_in ISO (MGI:6885507|PMID:35175278) RGD PMID:35175278 MGI:6885507 NCBI chr 7:8,061,634...8,081,142
Ensembl chr 7:8,061,953...8,081,142 		JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1856799 (PMID:11875276) RGD PMID:11875276 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665 		JBrowse link
G Cdh23 cadherin-related 23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856228|MGI:1856681|MGI:1891428|MGI:2154548|MGI:2154549 (PMID:11138008), (PMID:11322776), (PMID:12121736), (PMID:15537665), (PMID:17050716), (PMID:23217710), (PMID:7610888), (PMID:8790740), (PMID:9039475)		 Ensembl
RGD		 PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... GO_REF:0000107 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419 		JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within ISO MGI:3663254 (PMID:17021174) RGD PMID:17021174 NCBI chr 9:16,710,980...16,813,502
Ensembl chr 9:16,710,980...16,813,427 		JBrowse link
G Clrn1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3850171 (PMID:19414487), (PMID:19423712)		 Ensembl
RGD		 PMID:19414487 PMID:19423712 GO_REF:0000107 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948 		JBrowse link
G Clrn2 clarin 2 involved_in ISO (MGI:6810803|PMID:33496845) RGD PMID:33496845 MGI:6810803 NCBI chr14:65,656,029...65,666,325
Ensembl chr14:65,656,550...65,666,193 		JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 acts_upstream_of_or_within ISO MGI:2139535|MGI:6281113|MGI:6281114 (PMID:30380417) RGD PMID:30380417 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094 		JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within ISO MGI:3055797|MGI:3718054 (PMID:15905332), (PMID:17876667), (PMID:23217710) RGD PMID:15905332 PMID:17876667 PMID:23217710 NCBI chr20:6,632,324...6,642,534
Ensembl chr20:6,632,362...6,642,532 		JBrowse link
G Myo3a myosin IIIA involved_in ISO MGI:2448580 (PMID:26754646) RGD PMID:26754646 NCBI chr17:84,543,465...84,759,562
Ensembl chr17:84,543,552...84,759,042 		JBrowse link
G Myo3b myosin IIIB involved_in ISO MGI:2183924 (PMID:26754646) RGD PMID:26754646 NCBI chr 3:54,820,225...55,228,518
Ensembl chr 3:54,820,251...55,227,373 		JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1860092|MGI:2155422 (PMID:11753415), (PMID:12121736), (PMID:17050716) RGD PMID:11753415 PMID:12121736 PMID:17050716 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 acts_upstream_of_or_within ISO MGI:3526430 (PMID:24920589) RGD PMID:24920589 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598 		JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:1855958|MGI:1856394|MGI:1856396|MGI:1890219|MGI:2151877|MGI:3505691 (PMID:10978835), (PMID:11124469), (PMID:15537665), (PMID:16887306), (PMID:23217710) RGD PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719 		JBrowse link
G Pdzd7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4433578 (PMID:24334608)		 GO_Central
RGD		 PMID:24334608 GO_REF:0000033 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839 		JBrowse link
G Pls1 plastin 1 involved_in ISO (MGI:5608770|PMID:25124451) RGD PMID:25124451 MGI:5608770 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:6193260|PMID:29961578)		 UniProt
RGD		 PMID:29961578 GO_REF:0000024 MGI:6193260 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:5789047 NCBI chr17:40,323,748...40,547,482
Ensembl chr17:40,323,867...40,548,092 		JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (PMID:20215345) RGD PMID:20215345 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (PMID:20215345) RGD PMID:20215345 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857872 (PMID:10464373), (PMID:10466888)		 UniProt
RGD		 PMID:10464373 PMID:10466888 GO_REF:0000024 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249 		JBrowse link
G Strc stereocilin involved_in
acts_upstream_of_or_within		 ISO (MGI:5430850|PMID:21165971)
MGI:109575|MGI:3818633 (PMID:18849963), (PMID:30801007)		 RGD PMID:18849963 PMID:21165971 PMID:30801007 MGI:5430850 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134 		JBrowse link
G Tecta tectorin alpha acts_upstream_of_or_within ISO MGI:2153816 (PMID:30801007) RGD PMID:30801007 NCBI chr 8:42,707,962...42,779,726
Ensembl chr 8:42,707,962...42,779,707 		JBrowse link
G Tprn taperin involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2685697 (PMID:30380417)		 GO_Central
RGD		 PMID:30380417 GO_REF:0000033 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642 		JBrowse link
G Triobp TRIO and F-actin binding protein acts_upstream_of_or_within ISO MGI:4881773 (PMID:20510926) RGD PMID:20510926 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474 		JBrowse link
G Whrn whirlin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:4432119 (PMID:27117407)
GO_REF:0000033
GO_REF:0000118		 Ensembl
RGD
GO_Central
TreeGrafter		 PMID:27117407 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
axial mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857546 (PMID:9230313)		 Ensembl
RGD		 PMID:9230313 GO_REF:0000107 NCBI chr10:15,163,477...15,215,615
Ensembl chr10:15,163,684...15,215,615 		JBrowse link
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO MGI:2448472 (PMID:11287184) RGD PMID:11287184 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117 		JBrowse link
axial mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:14511481) RGD PMID:14511481 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98956 (PMID:11029008) RGD PMID:11029008 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839484 (PMID:20630950) RGD PMID:20630950 NCBI chr  X:66,404,807...66,427,775
Ensembl chr  X:66,404,760...66,428,387 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1298218 (PMID:11029008) RGD PMID:11029008 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
blastocyst development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 acts_upstream_of_or_within ISO RGD MGI:1888635 NCBI chr13:76,786,580...76,807,096
Ensembl chr13:76,786,578...76,807,459 		JBrowse link
G Bnip2 BCL2 interacting protein 2 acts_upstream_of_or_within ISO (PMID:19117032) RGD PMID:19117032 NCBI chr 8:70,640,436...70,661,782
Ensembl chr 8:70,640,445...70,675,590 		JBrowse link
G Capn2 calpain 2 acts_upstream_of_or_within ISO MGI:3628453 (PMID:16433929) RGD PMID:16433929 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969 		JBrowse link
G Cdk11b cyclin-dependent kinase 11B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3043373 (PMID:15060143)		 Ensembl
RGD		 PMID:15060143 GO_REF:0000107 NCBI chr 5:166,212,761...166,238,883
Ensembl chr 5:166,212,829...166,238,876 		JBrowse link
G Cdx2 caudal type homeo box 2 acts_upstream_of_or_within ISO MGI:1857928 (PMID:15788452) RGD PMID:15788452 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142 		JBrowse link
G Dad1 defender against cell death 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2445490 (PMID:10748466)		 Ensembl
RGD		 PMID:10748466 GO_REF:0000107 NCBI chr15:27,677,286...27,697,120
Ensembl chr15:27,677,268...27,697,347 		JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 acts_upstream_of_or_within ISO MGI:3497714 (PMID:15452149) RGD PMID:15452149 NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478 		JBrowse link
G Elf3 E74 like ETS transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16630543)		 Ensembl
RGD		 PMID:16630543 GO_REF:0000107 NCBI chr13:46,690,460...46,695,394
Ensembl chr13:46,690,466...46,695,481 		JBrowse link
G Emg1 EMG1 N1-specific pseudouridine methyltransferase acts_upstream_of_or_within ISO MGI:4839753 (PMID:20858271) RGD PMID:20858271 NCBI chr 4:157,509,258...157,517,540
Ensembl chr 4:157,509,277...157,517,540 		JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO MGI:3579497 (PMID:15788452) RGD PMID:15788452 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO (PMID:16630543) RGD PMID:16630543 NCBI chr 1:85,890,562...85,894,025
Ensembl chr 1:85,890,559...85,893,431 		JBrowse link
G G2e3 G2/M-phase specific E3 ubiquitin protein ligase acts_upstream_of_or_within ISO MGI:3808723 (PMID:18511420) RGD PMID:18511420 NCBI chr 6:68,763,847...68,795,305
Ensembl chr 6:68,764,185...68,793,924 		JBrowse link
G Gdf9 growth differentiation factor 9 involved_in ISO (PMID:24313324) RGD PMID:24313324 NCBI chr10:37,589,200...37,599,970
Ensembl chr10:37,595,679...37,599,672 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in ISO (PMID:11802795) RGD PMID:11802795 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO (PMID:16880268) RGD PMID:16880268 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Hormad1 HORMA domain containing 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4868505|PMID:21079677)		 UniProt
RGD		 PMID:21079677 GO_REF:0000024 MGI:4868505 NCBI chr 2:183,115,815...183,152,383
Ensembl chr 2:183,116,716...183,152,383 		JBrowse link
G Kpna7 karyopherin subunit alpha 7 acts_upstream_of_or_within ISO MGI:6108355 (PMID:20699224) RGD PMID:20699224 NCBI chr12:9,576,378...9,635,247
Ensembl chr12:9,576,378...9,612,833 		JBrowse link
G Med21 mediator complex subunit 21 acts_upstream_of_or_within ISO MGI:2445456 (PMID:10500093) RGD PMID:10500093 NCBI chr 4:179,560,509...179,583,811
Ensembl chr 4:179,560,579...179,567,548 		JBrowse link
G N4bp2l2 NEDD4 binding protein 2-like 2 acts_upstream_of_or_within ISO (PMID:18360097) RGD PMID:18360097 NCBI chr12:137,342...200,292
Ensembl chr12:103,590...197,784 		JBrowse link
G Nasp nuclear autoantigenic sperm protein involved_in ISS
ISO		 GO_REF:0000024
(MGI:3694318|PMID:16728391)		 UniProt
RGD		 PMID:16728391 GO_REF:0000024 MGI:3694318 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928 		JBrowse link
G Nek2 NIMA-related kinase 2 acts_upstream_of_or_within ISO (PMID:19117032) RGD PMID:19117032 NCBI chr13:103,405,818...103,419,063
Ensembl chr13:103,405,819...103,419,051 		JBrowse link
G Nlrp9 NLR family, pyrin domain containing 9 acts_upstream_of_or_within ISO MGI:2675292|MGI:3028627 (PMID:32413845) RGD PMID:32413845 NCBI chr 1:68,291,180...68,341,512
Ensembl chr 1:68,291,180...68,341,512 		JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 involved_in ISO (PMID:12714744) RGD PMID:12714744 NCBI chr15:45,722,282...45,729,336
Ensembl chr15:45,722,400...45,729,726 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (MGI:4946964|PMID:21258368) RGD PMID:21258368 MGI:4946964 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma acts_upstream_of_or_within ISO MGI:2182577 (PMID:12606345) RGD PMID:12606345 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553 		JBrowse link
G Psmc3 proteasome 26S subunit, ATPase 3 acts_upstream_of_or_within ISO MGI:2180548 (PMID:10945464) RGD PMID:10945464 NCBI chr 3:77,031,825...77,037,207
Ensembl chr 3:77,031,825...77,043,358 		JBrowse link
G Psmc4 proteasome 26S subunit, ATPase 4 acts_upstream_of_or_within ISO MGI:2180553 (PMID:10945464) RGD PMID:10945464 NCBI chr 1:83,349,127...83,357,497
Ensembl chr 1:83,348,592...83,357,494 		JBrowse link
G Rpl13 ribosomal protein L13 acts_upstream_of ISO (PMID:26902285) RGD PMID:26902285 NCBI chr19:51,153,990...51,156,541
Ensembl chr19:51,153,924...51,163,014 		JBrowse link
G Rrm2 ribonucleotide reductase regulatory subunit M2 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:26902285)		 Ensembl
RGD		 PMID:26902285 GO_REF:0000107 NCBI chr 6:41,339,858...41,346,774
Ensembl chr 6:41,340,557...41,346,773 		JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within ISO MGI:2387974|MGI:2388033 (PMID:11263494), (PMID:11313485) RGD PMID:11263494 PMID:11313485 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620 		JBrowse link
G Specc1 sperm antigen with calponin homology and coiled-coil domains 1 acts_upstream_of_or_within ISO (PMID:34166821) RGD PMID:34166821 NCBI chr10:46,638,947...46,912,989
Ensembl chr10:46,638,809...46,912,802 		JBrowse link
G Spic Spi-C transcription factor acts_upstream_of_or_within ISO (PMID:16630543) RGD PMID:16630543 NCBI chr 7:23,069,815...23,077,517
Ensembl chr 7:23,069,821...23,077,548 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:9921650)		 Ensembl
RGD		 PMID:9921650 GO_REF:0000107 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (PMID:9921650) RGD PMID:9921650 NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341 		JBrowse link
G Thoc2 THO complex subunit 2 acts_upstream_of_or_within ISO (PMID:24315442) RGD PMID:24315442 NCBI chr  X:120,634,966...120,749,569
Ensembl chr  X:120,634,968...120,749,513 		JBrowse link
G Thoc5 THO complex subunit 5 acts_upstream_of_or_within ISO (PMID:24315442) RGD PMID:24315442 NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718 		JBrowse link
G Xab2 XPA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3574459 (PMID:15725628)		 Ensembl
RGD		 PMID:15725628 GO_REF:0000107 NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of ISO MGI:3056522|MGI:3757577|MGI:4819826 (PMID:26902285) RGD PMID:26902285 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
blastocyst formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Bysl bystin-like acts_upstream_of_or_within ISO (PMID:17242206) RGD PMID:17242206 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339 		JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within ISO MGI:3050548 (PMID:17784788) RGD PMID:17784788 NCBI chr15:24,014,905...24,031,357
Ensembl chr15:24,014,908...24,028,475 		JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in ISO
IEA		 UniProtKB:Q61139 (MGI:5702364|PMID:26416966)
GO_REF:0000107		 RGD
Ensembl		 PMID:26416966 GO_REF:0000107 MGI:5702364 NCBI chr 1:134,348,142...134,361,182
Ensembl chr 1:134,348,144...134,364,314 		JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr11:23,888,586...23,917,612
Ensembl chr11:23,888,815...23,917,605 		JBrowse link
G Kdm4c lysine demethylase 4C acts_upstream_of_or_within ISO (PMID:19696013) RGD PMID:19696013 NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818 		JBrowse link
G Matr3 matrin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:27869233)		 Ensembl
RGD		 PMID:27869233 GO_REF:0000107 NCBI chr18:27,154,098...27,193,212
Ensembl chr18:27,163,714...27,193,166 		JBrowse link
G Mfn2 mitofusin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16083859)		 Ensembl
RGD		 PMID:16083859 GO_REF:0000107 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342 		JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 7:110,310,810...110,328,653
Ensembl chr 7:110,310,812...110,328,653 		JBrowse link
G Mxi1 MAX interactor 1, dimerization protein acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:252,323,915...252,383,682
Ensembl chr 1:252,323,303...252,383,681 		JBrowse link
G Nop2 NOP2 nucleolar protein acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 4:157,932,731...157,944,462
Ensembl chr 4:157,932,716...157,944,459 		JBrowse link
G Pbrm1 polybromo 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr16:6,213,507...6,312,895
Ensembl chr16:6,213,300...6,311,780 		JBrowse link
G Pnldc1 PARN like ribonuclease domain containing exonuclease 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:47,843,224...47,861,675
Ensembl chr 1:47,843,224...47,861,674 		JBrowse link
G Ptpn18 protein tyrosine phosphatase, non-receptor type 18 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 9:36,672,325...36,689,963
Ensembl chr 9:36,672,362...36,690,995 		JBrowse link
G Rpl7l1 ribosomal protein L7-like 1 acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 9:14,198,101...14,206,119
Ensembl chr 9:14,198,092...14,206,110 		JBrowse link
G Rrp7a ribosomal RNA processing 7 homolog A acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 7:114,262,929...114,272,817
Ensembl chr 7:114,256,472...114,272,817 		JBrowse link
G Rtn4 reticulon 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:27869233)		 Ensembl
RGD		 PMID:27869233 GO_REF:0000107 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686 		JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300 		JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 6:27,826,044...27,835,086
Ensembl chr 6:27,826,029...27,835,156 		JBrowse link
G Skil SKI-like proto-oncogene acts_upstream_of_or_within ISO MGI:2387096 (PMID:10811619) RGD PMID:10811619 NCBI chr 2:112,247,047...112,275,176
Ensembl chr 2:112,247,051...112,275,080 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780 		JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO MGI:3763362 (PMID:18804437) RGD PMID:18804437 NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323 		JBrowse link
G Tjp1 tight junction protein 1 acts_upstream_of_or_within ISO (PMID:18423437) RGD PMID:18423437 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432 		JBrowse link
G Tm4sf1 transmembrane 4 L six family member 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 2:141,456,950...141,466,146
Ensembl chr 2:141,453,310...141,466,146 		JBrowse link
G Txnrd3 thioredoxin reductase 3 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 4:122,072,548...122,112,493
Ensembl chr 4:122,072,548...122,112,491 		JBrowse link
G Uspl1 ubiquitin specific peptidase like 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr12:5,823,460...5,850,470
Ensembl chr12:5,823,359...5,850,366 		JBrowse link
G Wdr74 WD repeat domain 74 acts_upstream_of_or_within ISO (PMID:21799883), (PMID:27869233) RGD PMID:21799883 PMID:27869233 NCBI chr 1:205,631,769...205,636,558
Ensembl chr 1:205,631,824...205,636,563 		JBrowse link
G Zp3 zona pellucida glycoprotein 3 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(MGI:4943828|PMID:20382503)		 Ensembl
UniProt
RGD		 PMID:20382503 GO_REF:0000024 GO_REF:0000107 MGI:4943828 NCBI chr12:20,690,547...20,697,513
Ensembl chr12:20,690,547...20,697,513 		JBrowse link
blastocyst growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO MGI:101893 (PMID:24036311) RGD PMID:24036311 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303 		JBrowse link
G Ints1 integrator complex subunit 1 acts_upstream_of_or_within ISO MGI:3663683 (PMID:17544522) RGD PMID:17544522 NCBI chr12:14,861,312...14,886,048
Ensembl chr12:14,861,318...14,886,037 		JBrowse link
G Nbn nibrin involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:2680772|PMID:14612522)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:14612522 GO_REF:0000024 GO_REF:0000107 MGI:2680772 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO MGI:109345 (PMID:24036311) RGD PMID:24036311 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Rad51b RAD51 paralog B acts_upstream_of_or_within ISO MGI:3621480 (PMID:10567591) RGD PMID:10567591 NCBI chr 6:98,096,525...98,640,988
Ensembl chr 6:98,098,868...98,640,979 		JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) acts_upstream_of_or_within ISO (PMID:24036311) RGD PMID:24036311 NCBI chr 3:106,659,363...106,718,956
Ensembl chr 3:106,659,308...106,718,970 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2386105 (PMID:11163203) RGD PMID:11163203 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Ubtfl1 upstream binding transcription factor like 1 acts_upstream_of_or_within ISO (PMID:19915186) RGD PMID:19915186 NCBI chr 8:15,511,217...15,512,404
Ensembl chr 8:16,073,983...16,075,170 		JBrowse link
G Zfp830 zinc finger protein 830 acts_upstream_of_or_within ISO MGI:3583779 (PMID:15988037) RGD PMID:15988037 NCBI chr10:67,701,340...67,702,804
Ensembl chr10:67,701,073...67,704,523 		JBrowse link
blastocyst hatching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap3 A-kinase anchoring protein 3 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 4:159,688,049...159,714,067
Ensembl chr 4:159,699,289...159,713,903 		JBrowse link
G Ankrd7 ankyrin repeat domain 7 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 4:47,312,270...47,336,754
Ensembl chr 4:47,318,420...47,336,753 		JBrowse link
G Arhgdig Rho GDP dissociation inhibitor gamma acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr10:15,219,049...15,221,257
Ensembl chr10:15,219,049...15,221,213 		JBrowse link
G Asf1b anti-silencing function 1B histone chaperone acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549 		JBrowse link
G Bcor BCL6 co-repressor acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:10,609,756...10,729,613
Ensembl chr  X:10,687,732...10,729,613 		JBrowse link
G C9h6orf141 similar to human chromosome 6 open reading frame 141 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 9:20,024,916...20,029,094
Ensembl chr 9:20,024,916...20,029,094 		JBrowse link
G Ccdc24 coiled-coil domain containing 24 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 5:131,398,766...131,412,395
Ensembl chr 5:131,408,143...131,412,029 		JBrowse link
G Ccdc62 coiled-coil domain containing 62 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr12:32,623,170...32,659,912
Ensembl chr12:32,623,170...32,660,017 		JBrowse link
G Cmtm3 CKLF-like MARVEL transmembrane domain containing 3 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr19:622,563...630,721
Ensembl chr19:604,458...629,790 		JBrowse link
G Coprs coordinator of PRMT5 and differentiation stimulator acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr16:75,721,264...75,726,375
Ensembl chr16:75,720,061...75,726,375 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303 		JBrowse link
G Fbll1 fibrillarin-like 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299 		JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO (PMID:15901638) RGD PMID:15901638 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775 		JBrowse link
G Hcfc1 host cell factor C1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:151,687,779...151,712,688
Ensembl chr  X:151,687,779...151,712,638 		JBrowse link
G Hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr10:13,781,999...13,788,133
Ensembl chr10:13,781,993...13,788,133 		JBrowse link
G Lpar6 lysophosphatidic acid receptor 6 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr15:48,416,548...48,418,357
Ensembl chr15:48,416,544...48,422,331 		JBrowse link
G Ndufa2 NADH:ubiquinone oxidoreductase subunit A2 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr18:28,355,774...28,357,863
Ensembl chr18:28,355,774...28,358,076 		JBrowse link
G Necab1 N-terminal EF-hand calcium binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:27869233)		 Ensembl
RGD		 PMID:27869233 GO_REF:0000107 NCBI chr 5:28,357,859...28,578,642
Ensembl chr 5:28,357,859...28,578,642
Ensembl chr 5:28,357,859...28,578,642 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:27869233)		 Ensembl
RGD		 PMID:27869233 GO_REF:0000107 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
G Phf6 PHD finger protein 6 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:132,656,658...132,699,720
Ensembl chr  X:132,656,672...132,699,127 		JBrowse link
G Plpp4 phospholipid phosphatase 4 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:183,829,794...183,959,319
Ensembl chr 1:183,830,409...183,959,319 		JBrowse link
G Ppp4r4 protein phosphatase 4, regulatory subunit 4 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 6:122,663,172...122,753,988
Ensembl chr 6:122,663,344...122,753,384 		JBrowse link
G Prss29 serine protease 29 acts_upstream_of_or_within ISO MGI:2149951 (PMID:17156484) RGD PMID:17156484 NCBI chr10:14,337,315...14,341,038
Ensembl chr10:14,339,036...14,341,038 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease acts_upstream_of_or_within ISO MGI:3577029 (PMID:15831459) RGD PMID:15831459 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Slc25a34 solute carrier family 25, member 34 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 5:153,932,081...153,936,854 JBrowse link
G Slc35e2b solute carrier family 35, member E2B acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 5:166,185,166...166,211,055
Ensembl chr 5:166,185,166...166,207,021 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2386105 (PMID:11163203) RGD PMID:11163203 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within ISO MGI:2387974|MGI:2388033 (PMID:11263494), (PMID:11313485) RGD PMID:11263494 PMID:11313485 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620 		JBrowse link
G Smim14 small integral membrane protein 14 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr14:42,783,361...42,829,762
Ensembl chr14:42,783,332...42,829,760 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr17:76,740,755...76,884,178
Ensembl chr17:76,745,224...76,884,299 		JBrowse link
G Stmn3 stathmin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:27869233)		 Ensembl
RGD		 PMID:27869233 GO_REF:0000107 NCBI chr 3:168,416,810...168,424,946
Ensembl chr 3:168,416,810...168,425,056 		JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr12:39,477,181...39,499,633
Ensembl chr12:39,477,568...39,499,628 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:14,421,028...14,433,993
Ensembl chr  X:14,421,109...14,433,982 		JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:141,792,589...141,795,257 JBrowse link
G Tbl1xr1 TBL1X/Y related 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 2:104,788,950...104,929,055
Ensembl chr 2:104,801,721...104,929,055 		JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:116,114,339...116,125,076
Ensembl chr  X:116,113,875...116,125,070 		JBrowse link
G Zbed6 zinc finger, BED-type containing 6 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr13:45,107,253...45,113,524
Ensembl chr13:45,071,718...45,114,009 		JBrowse link
G Zfp14 ZFP14 zinc finger protein acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:85,268,649...85,286,125
Ensembl chr 1:85,268,643...85,285,759 		JBrowse link
G Zfp420 zinc finger protein 420 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:85,092,810...85,143,682
Ensembl chr 1:85,093,085...85,106,693
Ensembl chr 1:85,093,085...85,106,693 		JBrowse link
branching involved in labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin acts_upstream_of_or_within ISO MGI:2176598 (PMID:16981008) RGD PMID:16981008 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153790 (PMID:9435295) RGD PMID:9435295 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3583769 (PMID:23610556)		 Ensembl
RGD		 PMID:23610556 GO_REF:0000107 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Gcm1 glial cells missing transcription factor 1 acts_upstream_of_or_within ISO MGI:2183479 (PMID:10888880) RGD PMID:10888880 NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924 		JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2677457 (PMID:11369229)		 Ensembl
RGD		 PMID:11369229 GO_REF:0000107 NCBI chr10:100,881,404...100,949,193
Ensembl chr10:100,869,718...100,949,309 		JBrowse link
G Il10 interleukin 10 acts_upstream_of_or_within ISO MGI:1857199 (PMID:12842419) RGD PMID:12842419 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313 		JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO MGI:4331862 (PMID:21606200) RGD PMID:21606200 NCBI chr10:101,050,978...101,086,527
Ensembl chr10:101,051,408...101,086,525 		JBrowse link
G Rspo3 R-spondin 3 acts_upstream_of_or_within ISO MGI:3695687 (PMID:16963017) RGD PMID:16963017 NCBI chr 1:28,283,914...28,368,661
Ensembl chr 1:28,283,914...28,367,061 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180861 (PMID:11481489)		 Ensembl
RGD		 PMID:11481489 GO_REF:0000107 NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787 		JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within ISO MGI:3709554 (PMID:17174946) RGD PMID:17174946 NCBI chr 3:106,231,082...106,244,121
Ensembl chr 3:106,231,444...106,244,119 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4456438 (PMID:30236446)		 Ensembl
RGD		 PMID:30236446 GO_REF:0000107 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in ISO (MGI:1354065|PMID:10716450) RGD PMID:10716450 MGI:1354065 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Gcm1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2183479 (PMID:10888880)		 GO_Central
RGD		 PMID:10888880 GO_REF:0000033 NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924 		JBrowse link
G Krt19 keratin 19 acts_upstream_of_or_within ISO MGI:96705 (PMID:11062258) RGD PMID:11062258 NCBI chr10:85,075,835...85,080,552
Ensembl chr10:85,066,802...85,171,799 		JBrowse link
G Krt8 keratin 8 acts_upstream_of_or_within ISO MGI:96693 (PMID:11062258) RGD PMID:11062258 NCBI chr 7:133,124,203...133,131,656
Ensembl chr 7:133,124,203...133,131,728 		JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1929004 (PMID:19786569)		 Ensembl
RGD		 PMID:19786569 GO_REF:0000107 NCBI chr 7:66,053,209...66,323,292
Ensembl chr 7:66,052,345...66,323,233 		JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO MGI:1928487 (PMID:19786569) RGD PMID:19786569 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744 		JBrowse link
cell fate commitment involved in formation of primary germ layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) RGD PMID:19736317 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
cell migration involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amot angiomotin acts_upstream_of_or_within ISO MGI:2656627 (PMID:12676095) RGD PMID:12676095 NCBI chr  X:108,982,399...109,041,265
Ensembl chr  X:108,984,022...109,041,272 		JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO MGI:107405 (PMID:15004567) RGD PMID:15004567 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783 		JBrowse link
G Gpc3 glypican 3 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:131,868,986...132,236,824
Ensembl chr  X:131,868,990...132,236,798 		JBrowse link
G Lefty1 left right determination factor 1 acts_upstream_of_or_within ISO MGI:1201414 (PMID:15004567) RGD PMID:15004567 NCBI chr13:92,649,226...92,659,722
Ensembl chr13:92,656,323...92,659,720 		JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within ISO MGI:1298218 (PMID:15142971) RGD PMID:15142971 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1278315 (PMID:15142971) RGD PMID:15142971 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISO
IEA		 (PMID:23063620)
GO_REF:0000107		 RGD
Ensembl		 PMID:23063620 GO_REF:0000107 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Mixl1 Mix paired-like homeobox 1 acts_upstream_of_or_within ISO MGI:2387829 (PMID:17151016) RGD PMID:17151016 NCBI chr13:92,422,031...92,426,065
Ensembl chr13:92,422,031...92,426,065 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (PMID:16831833) RGD PMID:16831833 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:15004567) RGD PMID:15004567 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3608888 (PMID:21069829)		 Ensembl
RGD		 PMID:21069829 GO_REF:0000107 NCBI chr 1:195,935,162...195,941,469
Ensembl chr 1:195,935,349...195,941,467 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:3717121 (PMID:21146513) RGD PMID:21146513 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
cell migration involved in mesendoderm migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:2150346 (PMID:10421635) RGD PMID:10421635 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
cell-cell adhesion involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ric8a RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3608888 (PMID:21069829)		 Ensembl
RGD		 PMID:21069829 GO_REF:0000107 NCBI chr 1:195,935,162...195,941,469
Ensembl chr 1:195,935,349...195,941,467 		JBrowse link
chordate embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1, DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:1930613 (PMID:9171368)
GO_REF:0000118
GO_REF:0000033		 Ensembl
RGD
TreeGrafter
GO_Central		 PMID:9171368 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated acts_upstream_of_or_within ISO MGI:1930615 (PMID:9171368) RGD PMID:9171368 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Cenpu centromere protein U acts_upstream_of_or_within ISO MGI:5522669 (PMID:23724000) RGD PMID:23724000 NCBI chr16:45,715,821...45,739,038
Ensembl chr16:45,714,294...45,738,823 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:11331665 RGD:8686426 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Lims1 LIM zinc finger domain containing 1 acts_upstream_of_or_within ISO MGI:3577473 (PMID:15798193) RGD PMID:15798193 NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500 		JBrowse link
G Trip6 thyroid hormone receptor interactor 6 involved_in ISO (MGI:5509005|PMID:10826496) RGD PMID:10826496 MGI:5509005 NCBI chr12:19,386,212...19,390,619
Ensembl chr12:19,386,014...19,390,618 		JBrowse link
G Vezt vezatin, adherens junctions transmembrane protein acts_upstream_of_or_within ISO (PMID:16199027) RGD PMID:16199027 NCBI chr 7:28,512,214...28,597,429
Ensembl chr 7:28,534,249...28,597,356 		JBrowse link
chorio-allantoic fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in ISO UniProtKB:P23359 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO UniProtKB:P49003 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO MGI:2446577 (PMID:12446788) RGD PMID:12446788 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484 		JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO MGI:2151092 (PMID:10021343) RGD PMID:10021343 NCBI chr 4:5,452,683...5,556,679
Ensembl chr 4:5,452,683...5,556,659 		JBrowse link
G Erf Ets2 repressor factor acts_upstream_of_or_within ISO MGI:3719472 (PMID:17502352) RGD PMID:17502352 NCBI chr 1:80,829,935...80,838,388
Ensembl chr 1:80,829,935...80,838,388 		JBrowse link
G Itga4 integrin subunit alpha 4 acts_upstream_of_or_within ISO MGI:1857206 (PMID:7539359) RGD PMID:7539359 NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:98504 (PMID:10090727)		 Ensembl
RGD		 PMID:10090727 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:1857452|MGI:2153830 (PMID:7530222), (PMID:7539357) RGD PMID:7530222 PMID:7539357 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:2387443 (PMID:11543617) RGD PMID:11543617 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO MGI:3050540 (PMID:15226444) RGD PMID:15226444 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748 		JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phactr4 phosphatase and actin regulator 4 involved_in ISO (MGI:3719969|PMID:17609112) RGD PMID:17609112 MGI:3719969 NCBI chr 5:144,549,350...144,621,259
Ensembl chr 5:144,549,363...144,620,865 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3797299|PMID:18423449)		 UniProt
RGD		 PMID:18423449 GO_REF:0000024 MGI:3797299 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
cochlea morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1915838 (PMID:18606138)		 Ensembl
RGD		 PMID:18606138 GO_REF:0000107 NCBI chr 7:70,122,474...70,132,756
Ensembl chr 7:70,122,474...70,132,756 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO MGI:106613 (PMID:16116426) RGD PMID:16116426 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within ISO MGI:108100|MGI:94941 (PMID:16116426), (PMID:19008950) RGD PMID:16116426 PMID:19008950 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820 		JBrowse link
G Dvl3 dishevelled segment polarity protein 3 acts_upstream_of_or_within ISO MGI:106613|MGI:2135272 (PMID:19008950) RGD PMID:19008950 NCBI chr11:80,365,446...80,382,641
Ensembl chr11:80,366,117...80,382,462 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1857803 (PMID:10072433) RGD PMID:10072433 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Frzb frizzled-related protein acts_upstream_of_or_within ISO MGI:98958 (PMID:17433286) RGD PMID:17433286 NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208 		JBrowse link
G Fzd2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2135272 (PMID:20940229)		 Ensembl
RGD		 PMID:20940229 GO_REF:0000107 NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (PMID:17395647) RGD PMID:17395647 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Grhl3 grainyhead-like transcription factor 3 acts_upstream_of_or_within ISO MGI:2135272 (PMID:20643356) RGD PMID:20643356 NCBI chr 5:147,774,161...147,806,291
Ensembl chr 5:147,774,160...147,806,160 		JBrowse link
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Hpn hepsin involved_in ISS
ISO		 GO_REF:0000024
(MGI:5306554|PMID:20683358)		 UniProt
RGD		 PMID:20683358 GO_REF:0000024 MGI:5306554 NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811 		JBrowse link
G Myo3a myosin IIIA involved_in ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr17:84,543,465...84,759,562
Ensembl chr17:84,543,552...84,759,042 		JBrowse link
G Myo3b myosin IIIB involved_in ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr 3:54,820,225...55,228,518
Ensembl chr 3:54,820,251...55,227,373 		JBrowse link
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857673 (PMID:16916509)
UniProtKB:Q00288 (MGI:4822275|PMID:20727173), (MGI:84247|PMID:8951055)		 UniProt
RGD		 PMID:8951055 PMID:16916509 PMID:20727173 GO_REF:0000024 MGI:4822275 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pou3f4 POU class 3 homeobox 4 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:P70323 (MGI:5284768|PMID:18231833)		 UniProt
RGD		 PMID:18231833 GO_REF:0000024 MGI:5284768 NCBI chr  X:75,858,646...75,859,923
Ensembl chr  X:75,858,646...75,859,923 		JBrowse link
G Ptk7 protein tyrosine kinase 7 acts_upstream_of_or_within ISO MGI:3640803 (PMID:20704721) RGD PMID:20704721 NCBI chr 9:14,352,155...14,418,473
Ensembl chr 9:14,351,202...14,418,494 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (PMID:20016102) RGD PMID:20016102 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:2655195 (PMID:12874121) RGD PMID:12874121 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2385468|MGI:3841145 (PMID:20346939)		 UniProt
RGD		 PMID:20346939 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2179136 (PMID:17825816)
UniProtKB:P62515 (MGI:5284768|PMID:18231833)		 UniProt
RGD		 PMID:17825816 PMID:18231833 GO_REF:0000024 MGI:5284768 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO MGI:3044915 (PMID:18353863) RGD PMID:18353863 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:6710296|PMID:33795231) RGD PMID:33795231 MGI:6710296 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529 		JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592 		JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within ISO (PMID:10575115) RGD PMID:10575115 NCBI chr 6:110,341,585...110,475,297
Ensembl chr 6:110,341,581...110,474,538 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:108100|MGI:1857642|MGI:1888513|MGI:2655333|MGI:98958 (PMID:16116426), (PMID:17433286), (PMID:18606138), (PMID:19008950), (PMID:20643356), (PMID:20940229) RGD PMID:16116426 PMID:17433286 PMID:18606138 PMID:19008950 PMID:20643356 More... NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857617|MGI:2135272 (PMID:17433286)		 Ensembl
RGD		 PMID:17433286 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861230 (PMID:21980308)		 Ensembl
RGD		 PMID:21980308 GO_REF:0000107 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
convergent extension involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 involved_in ISO UniProtKB:Q6AZT7 (PMID:18371931) RGD PMID:18371931 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO MGI:106613 (PMID:16571627) RGD PMID:16571627 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within ISO MGI:2135272|MGI:2429760|MGI:94941 (PMID:16571627) RGD PMID:16571627 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:106613|MGI:1857642 (PMID:16571627), (PMID:17229766) RGD PMID:16571627 PMID:17229766 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
G Zfp568 zinc finger protein 568 acts_upstream_of_or_within ISO MGI:3578538 (PMID:18701545) RGD PMID:18701545 NCBI chr 1:85,206,643...85,257,759
Ensembl chr 1:85,207,579...85,257,505 		JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:108078|MGI:1860298 (PMID:18257070)		 Ensembl
RGD		 PMID:18257070 GO_REF:0000107 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
dorsal/ventral neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15218525)		 Ensembl
RGD		 PMID:15218525 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 acts_upstream_of_or_within ISO MGI:107689|MGI:3042750|MGI:3775614|MGI:95728 (PMID:18003640), (PMID:18590716) RGD PMID:18003640 PMID:18590716 NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612 		JBrowse link
G Foxa1 forkhead box A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1347476 (PMID:23383217)		 Ensembl
RGD		 PMID:23383217 GO_REF:0000107 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347472|MGI:95841 (PMID:18590716), (PMID:23383217), (PMID:9226455) RGD PMID:9226455 PMID:18590716 PMID:23383217 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:3711070|MGI:98297 (PMID:17504940), (PMID:17504941) RGD PMID:17504940 PMID:17504941 NCBI chr17:4,482,168...4,485,153 JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (PMID:18590716), (PMID:19286674), (PMID:9247260) RGD PMID:9247260 PMID:18590716 PMID:19286674 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within ISO MGI:1347476 (PMID:9226455) RGD PMID:9226455 NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111 		JBrowse link
G Kif3a kinesin family member 3a involved_in
acts_upstream_of_or_within		 ISO (MGI:4888042|PMID:21209331)
MGI:1341070|MGI:1861960|MGI:95728 (PMID:18590716), (PMID:19286674)		 RGD PMID:18590716 PMID:19286674 PMID:21209331 MGI:4888042 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:18590716) RGD PMID:18590716 NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465 		JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO (PMID:18590716) RGD PMID:18590716 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284 (PMID:10557208) RGD PMID:10557208 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (PMID:10557208) RGD PMID:10557208 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:1857447 (PMID:9262482) RGD PMID:9262482 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in ISO (MGI:69552|PMID:7720556) RGD PMID:7720556 MGI:69552 NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927 		JBrowse link
G Rnf220 ring finger protein 220 acts_upstream_of_or_within ISO MGI:6393918 (PMID:30177510) RGD PMID:30177510 NCBI chr 5:130,739,173...130,961,386
Ensembl chr 5:130,739,183...130,961,418 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95655 (PMID:17442700), (PMID:17504941), (PMID:18590716)
(MGI:4888042|PMID:21209331)		 Ensembl
RGD		 PMID:17442700 PMID:17504941 PMID:18590716 PMID:21209331 GO_REF:0000107 MGI:4888042 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176255 (PMID:18590716)		 Ensembl
RGD		 PMID:18590716 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO MGI:3716885 (PMID:16357211) RGD PMID:16357211 NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:19286674) RGD PMID:19286674 NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (PMID:8299937) RGD PMID:8299937 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:1862038 (PMID:10932191) RGD PMID:10932191 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Gjb6 gap junction protein, beta 6 acts_upstream_of_or_within ISO MGI:2447863 (PMID:12490528) RGD PMID:12490528 NCBI chr15:31,284,561...31,294,552
Ensembl chr15:31,284,419...31,294,582 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:8291537) RGD PMID:8291537 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2179191 (PMID:15190012)		 UniProt
RGD		 PMID:15190012 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within ISO MGI:5315747 (PMID:22228095) RGD PMID:22228095 NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288 		JBrowse link
ectoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:99783 (PMID:10498685) RGD PMID:10498685 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1347476 (PMID:10498685)		 UniProt
RGD		 PMID:10498685 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
ectodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO MGI:95456 (PMID:25446535) RGD PMID:25446535 NCBI chr 3:89,808,837...89,836,977
Ensembl chr 3:89,797,880...89,836,973 		JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor acts_upstream_of_or_within ISO MGI:1335079 (PMID:25446535) RGD PMID:25446535 NCBI chr11:35,021,536...35,038,322
Ensembl chr11:35,021,596...35,038,319 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:10742100) RGD PMID:10742100 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
embryo development ending in birth or egg hatching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme IMP RGD PMID:1784836 RGD:12879818 NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131 		JBrowse link
G Akirin2 akirin 2 involved_in ISO (MGI:3771766|PMID:18066067) RGD PMID:18066067 MGI:3771766 NCBI chr 5:49,108,231...49,122,566
Ensembl chr 5:49,108,220...49,122,568 		JBrowse link
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISO (MGI:6094483|PMID:28860385) RGD PMID:28860385 MGI:6094483 NCBI chr12:1,643,062...1,666,685
Ensembl chr12:1,643,251...1,666,685 		JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in IDA PMID:11276227 UniProt PMID:11276227 RGD:8554712 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456 		JBrowse link
G Evx1 even-skipped homeobox 1 acts_upstream_of_or_within ISO MGI:2177782 (PMID:7958869) RGD PMID:7958869 NCBI chr 4:81,416,590...81,420,967
Ensembl chr 4:81,416,590...81,420,967 		JBrowse link
G Fgf2 fibroblast growth factor 2 IMP RGD PMID:19476451 RGD:2315829 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:2686864 (PMID:14623825) RGD PMID:14623825 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Fxn frataxin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2177162 (PMID:10767347)		 Ensembl
RGD		 PMID:10767347 GO_REF:0000107 NCBI chr 1:221,874,007...221,897,543
Ensembl chr 1:221,872,420...221,897,540 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in ISO (MGI:3582004|PMID:15919177) RGD PMID:15919177 MGI:3582004 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2149941|PMID:11520675)		 UniProt
RGD		 PMID:11520675 GO_REF:0000024 MGI:2149941 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Rictor RPTOR independent companion of MTOR, complex 2 involved_in ISO (MGI:3702793|PMID:16962829) RGD PMID:16962829 MGI:3702793 NCBI chr 2:55,811,877...55,903,893
Ensembl chr 2:55,811,322...55,901,426 		JBrowse link
G Scel sciellin involved_in ISO (MGI:1928154|PMID:11112355) RGD PMID:11112355 MGI:1928154 NCBI chr15:80,339,661...80,456,546
Ensembl chr15:80,339,951...80,456,372 		JBrowse link
G Sebox SEBOX homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18753614)		 Ensembl
RGD		 PMID:18753614 GO_REF:0000107 NCBI chr10:63,399,215...63,400,086
Ensembl chr10:63,399,165...63,400,606 		JBrowse link
G Stox2 storkhead box 2 involved_in ISO
ISS		 (PMID:20643876)
GO_REF:0000024		 RGD
UniProt		 PMID:20643876 GO_REF:0000024 NCBI chr16:44,848,179...45,087,238
Ensembl chr16:44,848,078...45,085,105 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:2138319 (PMID:16702401) RGD PMID:16702401 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tp53bp2 tumor protein p53 binding protein, 2 acts_upstream_of_or_within ISO MGI:98834 (PMID:16702401) RGD PMID:16702401 NCBI chr13:94,088,769...94,145,436
Ensembl chr13:94,088,709...94,145,432 		JBrowse link
G Ubr3 ubiquitin protein ligase E3 component n-recognin 3 involved_in ISO (MGI:3718176|PMID:17462990) RGD PMID:17462990 MGI:3718176 NCBI chr 3:54,649,803...54,806,779
Ensembl chr 3:54,649,992...54,806,247 		JBrowse link
embryonic axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrd chordin involved_in ISO (PMID:11118896) RGD PMID:11118896 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Chrdl1 chordin-like 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:11118896), (PMID:11401399)		 Ensembl
RGD		 PMID:11118896 PMID:11401399 GO_REF:0000107 NCBI chr  X:106,889,125...106,992,937
Ensembl chr  X:106,889,125...106,992,921 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in IDA PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162 		JBrowse link
G Cobl cordon-bleu WH2 repeat protein involved_in ISO
IEA		 (MGI:76306|PMID:7586755)
GO_REF:0000107		 RGD
Ensembl		 PMID:7586755 GO_REF:0000107 MGI:76306 NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:9230313)		 Ensembl
RGD		 PMID:9230313 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Frat1 FRAT regulator of WNT signaling pathway 1 acts_upstream_of_or_within ISO (PMID:10534617) RGD PMID:10534617 NCBI chr 1:240,638,309...240,640,857
Ensembl chr 1:240,638,296...240,640,945 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO (PMID:12121999) RGD PMID:12121999 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (PMID:10385121) RGD PMID:10385121 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:4822553|PMID:2534596) RGD PMID:2534596 MGI:4822553 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:16826533) RGD PMID:16826533 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2653120|MGI:98297 (PMID:16647303), (PMID:16647304)		 Ensembl
RGD		 PMID:16647303 PMID:16647304 GO_REF:0000107 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033 		JBrowse link
G Fuz fuzzy planar cell polarity protein involved_in ISS
ISO		 GO_REF:0000024
(MGI:4438317|PMID:19767740), (MGI:5296432|PMID:21935430), (MGI:5498583|PMID:23806618)		 UniProt
RGD		 PMID:19767740 PMID:21935430 PMID:23806618 GO_REF:0000024 MGI:4438317 MGI:5296432 MGI:5498583 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530 		JBrowse link
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) RGD PMID:17565372 NCBI chr16:19,429,578...19,520,320
Ensembl chr16:19,429,578...19,519,587 		JBrowse link
G Grem2 gremlin 2, DAN family BMP antagonist involved_in ISO (MGI:5543884|PMID:23850456) RGD PMID:23850456 MGI:5543884 NCBI chr13:86,778,543...86,871,509
Ensembl chr13:86,778,500...86,871,615 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:3827087|PMID:19000668) RGD PMID:19000668 MGI:3827087 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Mab21l2 mab-21 like 2 acts_upstream_of_or_within ISO MGI:3511363 (PMID:15385160) RGD PMID:15385160 NCBI chr 2:171,946,573...171,949,655
Ensembl chr 2:171,946,573...171,949,655 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (PMID:16831833) RGD PMID:16831833 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217 		JBrowse link
G Ofd1 Ofd1 centriole and centriolar satellite protein involved_in ISO (MGI:5498583|PMID:23806618) RGD PMID:23806618 MGI:5498583 NCBI chr  X:28,015,347...28,056,115
Ensembl chr  X:28,015,347...28,056,110 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2183192 (PMID:15013802) RGD PMID:15013802 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Zfp281 zinc finger protein 281 involved_in ISO (MGI:5448369|PMID:21915945) RGD PMID:21915945 MGI:5448369 NCBI chr13:48,096,103...48,104,265
Ensembl chr13:48,037,286...48,104,888 		JBrowse link
embryonic brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 IEP RGD PMID:19819228 RGD:11537397 NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041 		JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A acts_upstream_of_or_within ISO MGI:5708063 (PMID:24947469) RGD PMID:24947469 NCBI chr14:67,349,004...67,435,883
Ensembl chr14:67,351,353...67,435,949 		JBrowse link
G Cdc40 cell division cycle 40 involved_in ISO (PMID:33220177) RGD PMID:33220177 NCBI chr20:44,273,080...44,325,605
Ensembl chr20:44,273,089...44,325,358 		JBrowse link
G Cdk20 cyclin-dependent kinase 20 acts_upstream_of_or_within ISO MGI:6113512 (PMID:28817564) RGD PMID:28817564 NCBI chr17:701,122...707,869
Ensembl chr17:701,124...707,826 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (PMID:32879327) RGD PMID:32879327 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA		 (MGI:1931800|PMID:11262227)
GO_REF:0000107		 RGD
Ensembl		 PMID:11262227 GO_REF:0000107 MGI:1931800 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G En1 engrailed homeobox 1 involved_in ISO (MGI:75252|PMID:7624797) RGD PMID:7624797 MGI:75252 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G En2 engrailed homeobox 2 involved_in ISO UniProtKB:P09065 (MGI:75252|PMID:7624797) RGD PMID:7624797 MGI:75252 NCBI chr 4:7,221,096...7,226,943
Ensembl chr 4:7,221,096...7,226,943 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO MGI:4458412 (PMID:23469164) RGD PMID:23469164 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839485 (PMID:20589884) RGD PMID:20589884 NCBI chr  X:66,404,807...66,427,775
Ensembl chr  X:66,404,760...66,428,387 		JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within ISO (PMID:32203821) RGD PMID:32203821 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid NOT|involved_in ISO (MGI:6196220|PMID:30074985) RGD PMID:30074985 MGI:6196220 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690 		JBrowse link
G Mir34b microRNA 34b acts_upstream_of_or_within ISO MGI:3619365|MGI:3619407|MGI:3639505|MGI:3718803 (PMID:24982181) RGD PMID:24982181 NCBI chr 8:51,410,244...51,410,327
Ensembl chr 8:51,410,244...51,410,327 		JBrowse link
G Mir34c microRNA 34c acts_upstream_of_or_within ISO MGI:3619364|MGI:3619407|MGI:3639505|MGI:3718803 (PMID:24982181) RGD PMID:24982181 NCBI chr 8:51,409,726...51,409,802
Ensembl chr 8:51,409,726...51,409,802 		JBrowse link
G Mir449a microRNA 449a acts_upstream_of_or_within ISO MGI:3619364|MGI:3619365|MGI:3639505|MGI:3718803 (PMID:24982181) RGD PMID:24982181 NCBI chr 2:44,670,714...44,670,804
Ensembl chr 2:44,670,714...44,670,804 		JBrowse link
G Mir449c microRNA 449c acts_upstream_of_or_within ISO MGI:3619364|MGI:3619365|MGI:3619407|MGI:3718803 (PMID:24982181) RGD PMID:24982181 NCBI chr 2:44,669,179...44,669,277
Ensembl chr 2:44,669,179...44,669,277 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4433029 (PMID:23454480)		 Ensembl
RGD		 PMID:23454480 GO_REF:0000107 NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655 		JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:4340776 (PMID:25220058) RGD PMID:25220058 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710 		JBrowse link
G Phf10 PHD finger protein 10 IEP RGD PMID:24056535 RGD:9588230 NCBI chr 1:55,952,249...55,968,994
Ensembl chr 1:55,952,253...55,969,038 		JBrowse link
G Ppil1 peptidylprolyl isomerase like 1 involved_in ISO (PMID:33220177) RGD PMID:33220177 NCBI chr20:7,302,292...7,322,349
Ensembl chr20:7,302,621...7,322,354 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17868671)		 Ensembl
RGD		 PMID:17868671 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Prickle2 prickle planar cell polarity protein 2 involved_in ISO (PMID:17868671) RGD PMID:17868671 NCBI chr 4:124,869,655...125,214,862
Ensembl chr 4:124,869,552...125,214,824 		JBrowse link
G Rnf112 ring finger protein 112 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:6154439|PMID:26951452)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:26951452 GO_REF:0000024 GO_REF:0000107 MGI:6154439 NCBI chr10:46,121,146...46,126,691
Ensembl chr10:46,121,148...46,126,699 		JBrowse link
G Rpl10 ribosomal protein L10 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25316788)		 UniProt
RGD		 PMID:25316788 GO_REF:0000024 NCBI chr  X:152,054,562...152,056,769
Ensembl chr  X:152,054,452...152,056,761 		JBrowse link
G Slc6a8 solute carrier family 6 member 8 IEP RGD PMID:15918910 RGD:1599815 NCBI chr  X:151,384,675...151,393,979
Ensembl chr  X:151,384,675...151,393,979 		JBrowse link
G Tbc1d23 TBC1 domain family, member 23 involved_in ISO
IBA		 (MGI:6094290|PMID:28823707)
GO_REF:0000033		 RGD
GO_Central		 PMID:28823707 GO_REF:0000033 MGI:6094290 NCBI chr11:43,303,355...43,361,507
Ensembl chr11:43,303,355...43,361,503 		JBrowse link
G Tmem94 transmembrane protein 94 acts_upstream_of_or_within ISO MGI:6358488 (PMID:30526868) RGD PMID:30526868 NCBI chr10:100,991,523...101,027,046
Ensembl chr10:100,991,573...101,027,394 		JBrowse link
G Tra2b transformer 2 beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176173|MGI:4450919 (PMID:22194695)		 Ensembl
RGD		 PMID:22194695 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249 		JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within ISO MGI:5056320 (PMID:21548880) RGD PMID:21548880 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223 		JBrowse link
G Tubb2b tubulin, beta 2B class IIb involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5056364 (PMID:21515572)		 Ensembl
RGD		 PMID:21515572 GO_REF:0000107 NCBI chr17:30,747,734...30,750,781
Ensembl chr17:30,747,734...30,750,638 		JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:3045659|PMID:15121182) RGD PMID:15121182 MGI:3045659 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1861722 (PMID:17184764) RGD PMID:17184764 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within		 ISO (MGI:3042765|PMID:14623956)
MGI:107928 (PMID:17184764)		 RGD PMID:14623956 PMID:17184764 MGI:3042765 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Cdk20 cyclin-dependent kinase 20 acts_upstream_of_or_within ISO MGI:6113512 (PMID:28817564) RGD PMID:28817564 NCBI chr17:701,122...707,869
Ensembl chr17:701,124...707,826 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (PMID:15958512) RGD PMID:15958512 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within ISO MGI:3574771|MGI:3583769 (PMID:18791178) RGD PMID:18791178 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO MGI:4458412 (PMID:23469164) RGD PMID:23469164 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Nes nestin involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:173,437,867...173,447,777
Ensembl chr 2:173,438,734...173,447,777 		JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857844|MGI:1857846|MGI:1857880 (PMID:10498698), (PMID:10572050) RGD PMID:10498698 PMID:10572050 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Ppp1r13l protein phosphatase 1, regulatory subunit 13 like acts_upstream_of_or_within ISO MGI:3575541 (PMID:15661756) RGD PMID:15661756 NCBI chr 1:79,010,997...79,030,714
Ensembl chr 1:79,011,745...79,030,712 		JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO MGI:97858 (PMID:7607067) RGD PMID:7607067 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:97856 (PMID:7607067) RGD PMID:7607067 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) RGD PMID:17473173 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO MGI:4129326 (PMID:21945076) RGD PMID:21945076 NCBI chr 9:92,073,622...92,110,427
Ensembl chr 9:92,073,640...92,108,977 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:19286674) RGD PMID:19286674 NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within ISO MGI:5315747 (PMID:22228095) RGD PMID:22228095 NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288 		JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO
IEA		 (PMID:17273977)
GO_REF:0000107		 RGD
Ensembl		 PMID:17273977 GO_REF:0000107 NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17070479) RGD PMID:17070479 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:1857654 (PMID:10049573) RGD PMID:10049573 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:97490 (PMID:18653562) RGD PMID:18653562 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within ISO MGI:3777403 (PMID:18056999) RGD PMID:18056999 NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349 		JBrowse link
G Foxf2 forkhead box F2 involved_in ISO (MGI:5297296|PMID:22022403) RGD PMID:22022403 MGI:5297296 NCBI chr17:32,835,730...32,842,547
Ensembl chr17:32,836,777...32,842,176 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3826935|PMID:18832390)		 Ensembl
RGD		 PMID:18832390 GO_REF:0000107 MGI:3826935 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4818711|PMID:20579985)		 Ensembl
RGD		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within ISO MGI:3578529 (PMID:28778798) RGD PMID:28778798 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2682066 (PMID:28778798)		 Ensembl
RGD		 PMID:28778798 GO_REF:0000107 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (PMID:18582859) RGD PMID:18582859 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191|MGI:4415718 (PMID:18985738), (PMID:19653321) RGD PMID:18985738 PMID:19653321 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1306784 (PMID:18653562)		 Ensembl
RGD		 PMID:18653562 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:3487212 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2176682 (PMID:9811866) RGD PMID:9811866 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Th tyrosine hydroxylase involved_in ISO (MGI:3617102|PMID:16445854) RGD PMID:16445854 MGI:3617102 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857515 (PMID:18436818)		 Ensembl
RGD		 PMID:18436818 GO_REF:0000107 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
embryonic cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatf apoptosis antagonizing transcription factor acts_upstream_of ISO MGI:2176283 (PMID:11071758) RGD PMID:11071758 NCBI chr10:69,299,029...69,392,207
Ensembl chr10:69,299,037...69,392,201 		JBrowse link
G Cul3 cullin 3 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5312166|PMID:22358839)		 UniProt
Ensembl
RGD		 PMID:22358839 GO_REF:0000024 GO_REF:0000107 MGI:5312166 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Dppa3 developmental pluripotency-associated 3 acts_upstream_of_or_within ISO MGI:3057184 (PMID:15018652) RGD PMID:15018652 NCBI chr 4:155,851,461...155,854,845
Ensembl chr 4:155,815,296...155,854,861
Ensembl chr 5:155,815,296...155,854,861 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183947 (PMID:9426063) RGD PMID:9426063 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Gdf9 growth differentiation factor 9 involved_in ISO (PMID:24313324) RGD PMID:24313324 NCBI chr10:37,589,200...37,599,970
Ensembl chr10:37,595,679...37,599,672 		JBrowse link
G Padi6 peptidyl arginine deiminase 6 involved_in ISO (MGI:6508663|PMID:16137333) RGD PMID:16137333 MGI:6508663 NCBI chr 5:153,021,855...153,037,443
Ensembl chr 5:153,021,965...153,037,414 		JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180703 (PMID:11919689)		 Ensembl
RGD		 PMID:11919689 GO_REF:0000107 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:25485583) RGD PMID:25485583 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G Top1 DNA topoisomerase I involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2678314 (PMID:8943335)		 Ensembl
RGD		 PMID:8943335 GO_REF:0000107 NCBI chr 3:149,293,469...149,376,618
Ensembl chr 3:149,293,403...149,376,623 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:11835580)		 Ensembl
RGD		 PMID:11835580 GO_REF:0000107 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Tpra1 transmembrane protein adipocyte associated 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18459117)		 Ensembl
RGD		 PMID:18459117 GO_REF:0000107 NCBI chr 4:121,364,093...121,375,275
Ensembl chr 4:121,364,091...121,375,269 		JBrowse link
embryonic cranial skeleton morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857137 (PMID:9268572)		 Ensembl
RGD		 PMID:9268572 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857828 (PMID:7590232)		 Ensembl
RGD		 PMID:7590232 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO
ISS		 (PMID:24360810)
GO_REF:0000024		 RGD
UniProt		 PMID:24360810 GO_REF:0000024 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in ISO (PMID:7874170), (PMID:7987400) RGD PMID:7874170 PMID:7987400 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857865 (PMID:9106663) RGD PMID:9106663 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397|MGI:98297 (PMID:17525797) RGD PMID:17525797 NCBI chr17:4,482,168...4,485,153 JBrowse link
G Gnas GNAS complex locus involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3043361 (PMID:15797856)		 Ensembl
RGD		 PMID:15797856 GO_REF:0000107 NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262
Ensembl chr 3:163,071,417...163,127,262 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4942413 (PMID:21377456) RGD PMID:21377456 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO MGI:4458412 (PMID:23469164) RGD PMID:23469164 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Irx5 iroquois homeobox 5 involved_in ISO (PMID:22581230) RGD PMID:22581230 NCBI chr19:14,639,052...14,643,911
Ensembl chr19:14,624,225...14,642,318 		JBrowse link
G Mmp14 matrix metallopeptidase 14 acts_upstream_of_or_within ISO MGI:1276107 (PMID:18022611) RGD PMID:18022611 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864 		JBrowse link
G Mmp16 matrix metallopeptidase 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101900 (PMID:18022611)		 Ensembl
RGD		 PMID:18022611 GO_REF:0000107 NCBI chr 5:31,312,280...31,556,276
Ensembl chr 5:31,312,280...31,548,388 		JBrowse link
G Nipbl NIPBL, cohesin loading factor acts_upstream_of_or_within ISO MGI:4332250 (PMID:19763162) RGD PMID:19763162 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163) RGD PMID:11311163 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within ISO MGI:2386577 (PMID:23349049) RGD PMID:23349049 NCBI chr 5:58,763,334...58,945,719
Ensembl chr 5:58,765,036...58,944,326 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in IEA
IBA
ISS
ISO		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
GO_REF:0000024
(MGI:894516|PMID:9226440)		 Ensembl
GO_Central
TreeGrafter
UniProt
RGD		 PMID:9226440 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:894516 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:1857640|MGI:98218 (PMID:7758948), (PMID:9729491) RGD PMID:7758948 PMID:9729491 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (PMID:9729491) RGD PMID:9729491 NCBI chr 3:14,132,574...14,168,533
Ensembl chr 3:14,094,004...14,168,535 		JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104685|MGI:98872 (PMID:15030764)		 Ensembl
RGD		 PMID:15030764 GO_REF:0000107 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (PMID:20133625) RGD PMID:20133625 NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:106034 (PMID:20515681) RGD PMID:20515681 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six2 SIX homeobox 2 acts_upstream_of_or_within ISO MGI:3691857 (PMID:20515681) RGD PMID:20515681 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (PMID:20515681) RGD PMID:20515681 NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
G Slc39a1 solute carrier family 39 member 1 acts_upstream_of_or_within ISO MGI:2147269|MGI:3625131 (PMID:16652366) RGD PMID:16652366 NCBI chr 2:175,703,413...175,709,063
Ensembl chr 2:175,703,441...175,709,058 		JBrowse link
G Slc39a3 solute carrier family 39 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1353474 (PMID:16652366)		 Ensembl
RGD		 PMID:16652366 GO_REF:0000107 NCBI chr 7:8,676,845...8,682,846
Ensembl chr 7:8,676,759...8,685,149 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO MGI:1201674 (PMID:15183723) RGD PMID:15183723 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (PMID:15183723) RGD PMID:15183723 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2179191 (PMID:15190012)		 UniProt
RGD		 PMID:15190012 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tbx15 T-box transcription factor 15 acts_upstream_of_or_within ISO MGI:1856015 (PMID:15728667) RGD PMID:15728667 NCBI chr 2:186,576,650...186,687,748
Ensembl chr 2:186,576,676...186,687,663 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1888387 (PMID:8622765)
(MGI:80519|PMID:8622766)		 UniProt
RGD		 PMID:8622765 PMID:8622766 GO_REF:0000024 MGI:80519 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2680164 (PMID:16806156)		 Ensembl
RGD		 PMID:16806156 GO_REF:0000107 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA		 (MGI:2678274|PMID:12975342)
GO_REF:0000107		 RGD
Ensembl		 PMID:12975342 GO_REF:0000107 MGI:2678274 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:8988166), (PMID:8988167)
MGI:99829 (PMID:15030764)
(MGI:1100098|PMID:8988167)		 RGD PMID:8988166 PMID:8988167 PMID:15030764 MGI:1100098 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Twist2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:99829 (PMID:15030764) RGD PMID:15030764 NCBI chr 9:92,374,740...92,419,222
Ensembl chr 9:92,374,574...92,419,222 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within ISO MGI:5315747 (PMID:22228095) RGD PMID:22228095 NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:1856821|MGI:3526437 (PMID:16054034), (PMID:16998816) RGD PMID:16054034 PMID:16998816 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035 		JBrowse link
embryonic digestive tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2155977 (PMID:7670465)		 Ensembl
RGD		 PMID:7670465 GO_REF:0000107 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1857891 (PMID:16806149) RGD PMID:16806149 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1927833 (PMID:16308329) RGD PMID:16308329 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (PMID:16308329) RGD PMID:16308329 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1347479 (PMID:16439479) RGD PMID:16439479 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Foxf2 forkhead box F2 acts_upstream_of_or_within ISO MGI:1347470 (PMID:16439479) RGD PMID:16439479 NCBI chr17:32,835,730...32,842,547
Ensembl chr17:32,836,777...32,842,176 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (PMID:10693670) RGD PMID:10693670 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:10693670) RGD PMID:10693670 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Myb MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO MGI:2662859 (PMID:10523863) RGD PMID:10523863 NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO
IEA		 (PMID:18519639)
GO_REF:0000107
(MGI:3795695|PMID:18519639)		 RGD
Ensembl		 PMID:18519639 GO_REF:0000107 MGI:3795695 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600 		JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic involved_in ISO (MGI:3813934|PMID:19097194) RGD PMID:19097194 MGI:3813934 NCBI chr 6:11,455,686...11,465,002
Ensembl chr 6:11,455,686...11,465,556 		JBrowse link
G Rarb retinoic acid receptor, beta involved_in ISO (PMID:19443732) RGD PMID:19443732 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288 		JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in ISO (PMID:19443732) RGD PMID:19443732 NCBI chr 4:77,522,549...77,525,733
Ensembl chr 4:77,522,535...77,525,556 		JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (PMID:18280297) RGD PMID:18280297 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Sct secretin IEP RGD PMID:1711228 RGD:729899 NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
ISS		 (PMID:20875417)
GO_REF:0000024		 RGD
AgBase		 PMID:20875417 GO_REF:0000024 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:20875417) RGD PMID:20875417 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
embryonic digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647|MGI:1927833 (PMID:15017552), (PMID:16618415) RGD PMID:15017552 PMID:16618415 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811|MGI:2183527 (PMID:16618415), (PMID:21492869), (PMID:21550054) RGD PMID:16618415 PMID:21492869 PMID:21550054 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Foxf1 forkhead box F1 involved_in ISO (PMID:19500772) RGD PMID:19500772 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2386764 (PMID:16127717) RGD PMID:16127717 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:16247775) RGD PMID:16247775 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of_or_within ISO MGI:2182089 (PMID:8557196) RGD PMID:8557196 NCBI chr13:96,280,335...96,285,750
Ensembl chr13:96,280,339...96,285,750 		JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857856 (PMID:18635606)		 Ensembl
RGD		 PMID:18635606 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4399020|PMID:16888283)		 UniProt
RGD		 PMID:16888283 GO_REF:0000024 MGI:4399020 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (PMID:10821773) RGD PMID:10821773 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:19242925), (PMID:8291537) RGD PMID:8291537 PMID:19242925 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3522498 (PMID:16423343) RGD PMID:16423343 NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:1860627|PMID:10903171)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:10903171 GO_REF:0000024 GO_REF:0000107 MGI:1860627 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335 		JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:3767234 (PMID:21550054) RGD PMID:21550054 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1934261 (PMID:10821773)		 Ensembl
RGD		 PMID:10821773 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Shox2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3605739 (PMID:16141225)		 Ensembl
RGD		 PMID:16141225 GO_REF:0000107 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:4365896|PMID:19660448) RGD PMID:19660448 MGI:4365896 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3052265|PMID:15254231)		 UniProt
RGD		 PMID:15254231 GO_REF:0000024 MGI:3052265 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
G Tcf21 transcription factor 21 IMP RGD PMID:11804032 RGD:727206 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202 		JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO MGI:1202879 (PMID:15057272) RGD PMID:15057272 NCBI chr10:36,423,443...36,454,350
Ensembl chr10:36,423,445...36,453,535 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:98507 (PMID:15057272) RGD PMID:15057272 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:1857484|MGI:88180 (PMID:9268572), (PMID:9272948) RGD PMID:9268572 PMID:9272948 NCBI chr 3:79,611,682...79,648,260
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G B9d1 B9 domain containing 1 acts_upstream_of_or_within ISO MGI:5301332 (PMID:22179047) RGD PMID:22179047 NCBI chr10:46,186,222...46,196,309
Ensembl chr10:46,186,691...46,196,008 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:108359|MGI:95729 (PMID:9268572)		 Ensembl
RGD		 PMID:9268572 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:88276 (PMID:20043884) RGD PMID:20043884 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within ISO MGI:3806990 (PMID:18539921) RGD PMID:18539921 NCBI chr 5:17,775,684...17,802,570
Ensembl chr 5:17,772,608...17,802,570 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3768254 (PMID:16079159)		 Ensembl
RGD		 PMID:16079159 GO_REF:0000107 NCBI chr 7:20,524,535...20,743,008
Ensembl chr 7:20,528,100...20,743,111 		JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO MGI:5297398 (PMID:25877302) RGD PMID:25877302 NCBI chr 2:57,269,195...57,369,580
Ensembl chr 2:57,268,884...57,369,500 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1338938|MGI:1858008|MGI:2148594|MGI:2158470 (PMID:12923052), (PMID:20043884)		 Ensembl
RGD		 PMID:12923052 PMID:20043884 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in ISO
IEA		 (PMID:9915973)
GO_REF:0000107		 RGD
Ensembl		 PMID:9915973 GO_REF:0000107 NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371 		JBrowse link
G Fbxw4 F-box and WD repeat domain containing 4 acts_upstream_of_or_within ISO MGI:1857833|MGI:1857834 (PMID:10471509), (PMID:9733575) RGD PMID:9733575 PMID:10471509 NCBI chr 1:244,426,892...244,514,188
Ensembl chr 1:244,426,896...244,514,163 		JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 acts_upstream_of_or_within ISO MGI:3776021 (PMID:18258918) RGD PMID:18258918 NCBI chr13:102,586,263...102,608,647
Ensembl chr13:102,586,257...102,608,661 		JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 acts_upstream_of_or_within ISO MGI:3794302 (PMID:26234751) RGD PMID:26234751 NCBI chr 2:137,602,784...137,740,785
Ensembl chr 2:137,602,784...137,740,785 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO MGI:3531090|MGI:4346364 (PMID:19877275), (PMID:27158779) RGD PMID:19877275 PMID:27158779 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:3711070|MGI:98297 (PMID:17504940), (PMID:17504941) RGD PMID:17504940 PMID:17504941 NCBI chr17:4,482,168...4,485,153 JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:2445472 (PMID:19439426) RGD PMID:19439426 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:3834146 (PMID:19056373) RGD PMID:19056373 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276|MGI:3798847|MGI:88180|MGI:96203|MGI:96204|MGI:96205 (PMID:16254602), (PMID:17714700), (PMID:19036983), (PMID:22841643), (PMID:9268572) RGD PMID:9268572 PMID:16254602 PMID:17714700 PMID:19036983 PMID:22841643 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gna12 G protein subunit alpha 12 acts_upstream_of_or_within ISO MGI:95776 (PMID:12077299) RGD PMID:12077299 NCBI chr12:13,805,580...13,886,255
Ensembl chr12:13,805,698...13,886,255 		JBrowse link
G Gnaq G protein subunit alpha q involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95767 (PMID:12077299)		 Ensembl
RGD		 PMID:12077299 GO_REF:0000107 NCBI chr 1:213,425,631...213,671,947
Ensembl chr 1:213,424,465...213,667,672 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4942413 (PMID:21377456) RGD PMID:21377456 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:12070084)		 Ensembl
RGD		 PMID:12070084 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO UniProtKB:P70288 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO UniProtKB:O09106 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96193|MGI:96203 (PMID:12869760) RGD PMID:12869760 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within ISO MGI:96172|MGI:96203 (PMID:12869760) RGD PMID:12869760 NCBI chr 7:134,091,224...134,094,738
Ensembl chr 7:134,091,552...134,094,738 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:95729|MGI:96172|MGI:96193|MGI:96204|MGI:96205 (PMID:12869760), (PMID:17714700), (PMID:8900279) RGD PMID:8900279 PMID:12869760 PMID:17714700 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Hoxd12 homeo box D12 acts_upstream_of_or_within ISO MGI:95729|MGI:96203|MGI:96205 (PMID:17714700), (PMID:8900279) RGD PMID:8900279 PMID:17714700 NCBI chr 3:59,577,677...59,578,798
Ensembl chr 3:59,577,677...59,578,798 		JBrowse link
G Hoxd13 homeo box D13 acts_upstream_of_or_within ISO MGI:1918115|MGI:95729|MGI:96203|MGI:96204 (PMID:17714700), (PMID:8900279), (PMID:9342042) RGD PMID:8900279 PMID:9342042 PMID:17714700 NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963 		JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within ISO MGI:3578529 (PMID:15755804) RGD PMID:15755804 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO MGI:4458412 (PMID:23469164) RGD PMID:23469164 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (PMID:15930098) RGD PMID:15930098 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527|MGI:3027342|MGI:3823090|MGI:98297 (PMID:12701101), (PMID:15755804), (PMID:15930098), (PMID:16254602), (PMID:19036983) RGD PMID:12701101 PMID:15755804 PMID:15930098 PMID:16254602 PMID:19036983 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 ISO (PMID:17889828)
MGI:1347521|MGI:3842979 (PMID:20660756)		 RGD PMID:17889828 PMID:20660756 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Intu inturned planar cell polarity protein involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:27158779)
(PMID:25774014)
GO_REF:0000107		 RGD
Ensembl		 PMID:25774014 PMID:27158779 GO_REF:0000107 NCBI chr 2:123,600,972...123,685,331
Ensembl chr 2:123,609,807...123,682,676 		JBrowse link
G Lmbr1 limb development membrane protein 1 acts_upstream_of_or_within ISO MGI:3579991 (PMID:11606546) RGD PMID:11606546 NCBI chr 4:5,974,687...6,146,348
Ensembl chr 4:5,974,750...6,146,368 		JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within ISO MGI:96205 (PMID:9342042) RGD PMID:9342042 NCBI chr 3:59,418,872...59,487,029
Ensembl chr 3:59,424,286...59,486,518 		JBrowse link
G Lrp4 LDL receptor related protein 4 acts_upstream_of_or_within ISO MGI:2661383|MGI:3580702 (PMID:16517118) RGD PMID:16517118 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593 		JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within ISO MGI:1298218 (PMID:15142971) RGD PMID:15142971 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1278315|MGI:2156191 (PMID:15142971), (PMID:19795512) RGD PMID:15142971 PMID:19795512 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:26755636) RGD PMID:26755636 NCBI chr 3:57,130,539...57,289,943
Ensembl chr 3:57,130,551...57,289,626 		JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within ISO (PMID:32203821) RGD PMID:32203821 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4410614|MGI:4433029|MGI:4887578 (PMID:19776033), (PMID:21045211), (PMID:23454480)		 Ensembl
RGD		 PMID:19776033 PMID:21045211 PMID:23454480 GO_REF:0000107 NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (PMID:21465616) RGD PMID:21465616 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO MGI:97168 (PMID:21465616) RGD PMID:21465616 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:17360777)		 Ensembl
RGD		 PMID:17360777 GO_REF:0000107 NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590 		JBrowse link
G Nog noggin involved_in IEA
ISO		 GO_REF:0000107
(PMID:10080184)		 Ensembl
RGD		 PMID:10080184 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO MGI:4941929 (PMID:23913870) RGD PMID:23913870 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Rab23 RAB23, member RAS oncogene family acts_upstream_of_or_within ISO MGI:2137533 (PMID:15755804), (PMID:9636176) RGD PMID:9636176 PMID:15755804 NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2386954|MGI:3793279|MGI:96533 (PMID:20660756) RGD PMID:20660756 NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152 		JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (PMID:18280297)
(MGI:4461128|PMID:18470945)		 RGD PMID:18280297 PMID:18470945 MGI:4461128 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:3810257 (PMID:18729207) RGD PMID:18729207 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:95655|MGI:98715 (PMID:15930098), (PMID:17504940), (PMID:17504941), (PMID:20660756)
(MGI:5559673|PMID:11044396)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:11044396 PMID:15930098 PMID:17504940 PMID:17504941 PMID:20660756 GO_REF:0000024 GO_REF:0000107 MGI:5559673 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5444318|PMID:23034633)		 Ensembl
RGD		 PMID:23034633 GO_REF:0000107 MGI:5444318 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within ISO MGI:4440463 (PMID:20159594) RGD PMID:20159594 NCBI chr20:35,359,865...35,590,992
Ensembl chr20:35,359,863...35,590,415 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:3487212 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:12116211), (PMID:9207801)
MGI:5538564 (PMID:27046536)
MGI:5538565 (PMID:23844108)
GO_REF:0000024		 RGD
UniProt		 PMID:9207801 PMID:12116211 PMID:23844108 PMID:27046536 GO_REF:0000024 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tmem107 transmembrane protein 107 involved_in ISO (MGI:5432629|PMID:22698544) RGD PMID:22698544 MGI:5432629 NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676 		JBrowse link
G Tmem231 transmembrane protein 231 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4284576 (PMID:22179047)		 Ensembl
RGD		 PMID:22179047 GO_REF:0000107 NCBI chr19:39,883,077...39,904,296
Ensembl chr19:39,883,077...39,904,269 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO MGI:4129326 (PMID:21945076) RGD PMID:21945076 NCBI chr 9:92,073,622...92,110,427
Ensembl chr 9:92,073,640...92,108,977 		JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within ISO MGI:5496675 (PMID:23141541) RGD PMID:23141541 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:19286674), (PMID:19334287) RGD PMID:19286674 PMID:19334287 NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:3038818 (PMID:15030764) RGD PMID:15030764 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:27158779)
MGI:5558098|MGI:5558100 (PMID:24302887)
GO_REF:0000107		 RGD
Ensembl		 PMID:24302887 PMID:27158779 GO_REF:0000107 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857617 (PMID:19795512)		 Ensembl
RGD		 PMID:19795512 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:16826533) RGD PMID:16826533 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 IMP RGD PMID:19191224 RGD:2312786 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
embryonic ectodermal digestive tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vps52 VPS52 subunit of GARP complex acts_upstream_of_or_within ISO (PMID:23142660) RGD PMID:23142660 NCBI chr20:4,920,715...4,931,685
Ensembl chr20:4,860,843...4,931,665 		JBrowse link
embryonic ectodermal digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 involved_in ISO (PMID:19500772) RGD PMID:19500772 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
embryonic epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ret ret proto-oncogene acts_upstream_of_or_within ISO MGI:1930016 (PMID:15569713) RGD PMID:15569713 NCBI chr 4:151,325,969...151,368,176
Ensembl chr 4:151,326,431...151,368,176 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97902 (PMID:15569713)		 Ensembl
RGD		 PMID:15569713 GO_REF:0000107 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO (PMID:16546160) RGD PMID:16546160 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 acts_upstream_of_or_within ISO MGI:1861722 (PMID:16207763), (PMID:16611695) RGD PMID:16207763 PMID:16611695 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 acts_upstream_of_or_within ISO MGI:1353450|MGI:3043947 (PMID:16207763), (PMID:16611695) RGD PMID:16207763 PMID:16611695 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 involved_in ISO
IEA		 (PMID:25406291)
GO_REF:0000107		 RGD
Ensembl		 PMID:25406291 GO_REF:0000107 NCBI chr14:102,610,813...102,690,027
Ensembl chr14:102,610,908...102,690,018 		JBrowse link
G Fbn1 fibrillin 1 involved_in ISO (PMID:25406291) RGD PMID:25406291 NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889 		JBrowse link
G Fbn2 fibrillin 2 involved_in ISO (PMID:25406291) RGD PMID:25406291 NCBI chr18:51,499,670...51,703,976
Ensembl chr18:51,499,737...51,703,976 		JBrowse link
G Foxl2 forkhead box L2 acts_upstream_of_or_within ISO MGI:3044226 (PMID:15056605) RGD PMID:15056605 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427 		JBrowse link
G Mfap2 microfibril associated protein 2 involved_in ISO
IBA		 (PMID:25406291)
GO_REF:0000033		 RGD
GO_Central		 PMID:25406291 GO_REF:0000033 NCBI chr 5:153,312,068...153,320,266
Ensembl chr 5:153,314,711...153,320,259 		JBrowse link
G Mfap5 microfibril associated protein 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:155,727,925...155,750,458
Ensembl chr 4:155,727,925...155,750,458 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO MGI:97858 (PMID:16207763) RGD PMID:16207763 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:97857 (PMID:16207763) RGD PMID:16207763 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177 		JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2159246 (PMID:10595508), (PMID:11830579)		 Ensembl
RGD		 PMID:10595508 PMID:11830579 GO_REF:0000107 NCBI chr 4:116,195,528...116,219,597
Ensembl chr 4:116,195,528...116,219,594 		JBrowse link
embryonic foregut morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857709 (PMID:10921901)		 Ensembl
RGD		 PMID:10921901 GO_REF:0000107 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2148567 (PMID:18692041)		 Ensembl
RGD		 PMID:18692041 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (PMID:18794329) RGD PMID:18794329 NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1929432 (PMID:11493558) RGD PMID:11493558 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Foxp4 forkhead box P4 acts_upstream_of_or_within ISO MGI:3055161 (PMID:15361625) RGD PMID:15361625 NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2179443|MGI:2386265 (PMID:9136932), (PMID:9136933) RGD PMID:9136932 PMID:9136933 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (PMID:16831833) RGD PMID:16831833 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857796 (PMID:9731532)		 Ensembl
RGD		 PMID:9731532 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO MGI:1201674 (PMID:15183723) RGD PMID:15183723 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (PMID:15183723) RGD PMID:15183723 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 ISO (MGI:4946573|PMID:21305474)
MGI:2179440|MGI:3717118|MGI:4356113 (PMID:18462699), (PMID:19619492)		 RGD PMID:18462699 PMID:19619492 PMID:21305474 MGI:4946573 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:2180721 (PMID:15069081), (PMID:20034106) RGD PMID:15069081 PMID:20034106 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within ISO MGI:108359 (PMID:11641221) RGD PMID:11641221 NCBI chr 2:195,231,197...195,241,609
Ensembl chr 2:195,231,197...195,241,609 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:1277097 (PMID:11641221) RGD PMID:11641221 NCBI chr 3:79,611,682...79,648,260
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) RGD PMID:15454078 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857508 (PMID:7720575)		 Ensembl
RGD		 PMID:7720575 GO_REF:0000107 NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15371327)		 Ensembl
RGD		 PMID:15371327 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO MGI:98961 (PMID:9362463) RGD PMID:9362463 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96203 (PMID:22916278) RGD PMID:22916278 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO MGI:2150506 (PMID:15733672) RGD PMID:15733672 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091 		JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within ISO MGI:96210 (PMID:8625797) RGD PMID:8625797 NCBI chr 4:81,323,235...81,329,344
Ensembl chr 4:81,323,382...81,326,358 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (PMID:22916278) RGD PMID:22916278 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Hoxd9 homeo box D9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2150414|MGI:96180 (PMID:8625797)		 Ensembl
RGD		 PMID:8625797 GO_REF:0000107 NCBI chr 3:59,600,575...59,602,755
Ensembl chr 3:59,600,575...59,602,754 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within ISO MGI:1857660 (PMID:22916278), (PMID:9342042) RGD PMID:9342042 PMID:22916278 NCBI chr 3:59,418,872...59,487,029
Ensembl chr 3:59,424,286...59,486,518 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1922667|MGI:2156191|MGI:4415718|MGI:98961 (PMID:11029008), (PMID:15880584), (PMID:18256198), (PMID:19653321) RGD PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:2158381 (PMID:17029558) RGD PMID:17029558 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (PMID:21465616) RGD PMID:21465616 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97168 (PMID:21465616)		 Ensembl
RGD		 PMID:21465616 GO_REF:0000107 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:19242925), (PMID:8291537) RGD PMID:8291537 PMID:19242925 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO UniProtKB:Q9WVG7 (MGI:2149941|PMID:11520675), (MGI:4950000|PMID:21262216) RGD PMID:11520675 PMID:21262216 MGI:2149941 MGI:4950000 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) RGD PMID:17473173 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs acts_upstream_of_or_within ISO MGI:4830337 (PMID:23213437) RGD PMID:23213437 NCBI chr 5:58,102,961...58,169,516
Ensembl chr 5:58,102,981...58,169,502 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904) RGD PMID:17553904 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO MGI:1298218|MGI:3045965 (PMID:18256198) RGD PMID:18256198 NCBI chr 7:74,096,378...74,239,398
Ensembl chr 7:74,103,090...74,238,933 		JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176466 (PMID:22916278)		 Ensembl
RGD		 PMID:22916278 GO_REF:0000107 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857796 (PMID:11118883), (PMID:11476582)		 Ensembl
RGD		 PMID:11118883 PMID:11476582 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Shox2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:22916278)		 Ensembl
RGD		 PMID:22916278 GO_REF:0000107 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO
ISS		 (PMID:12116211)
GO_REF:0000024		 RGD
UniProt		 PMID:12116211 GO_REF:0000024 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within		 ISO
IEA
ISS		 (PMID:16183809)
MGI:2387851 (PMID:11572777), (PMID:12490567)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:11572777 PMID:12490567 PMID:16183809 GO_REF:0000024 GO_REF:0000107 NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO		 GO_REF:0000024
(MGI:1313057|PMID:9811866)		 UniProt
RGD		 PMID:9811866 GO_REF:0000024 MGI:1313057 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:5882553|MGI:5882555 (PMID:25503409) RGD PMID:25503409 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857265 (PMID:12175489) RGD PMID:12175489 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902|MGI:2450903 (PMID:12569130) RGD PMID:12569130 NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within		 ISO (PMID:16826533)
MGI:1298218|MGI:1857009|MGI:95389 (PMID:15880584), (PMID:9362463)		 RGD PMID:9362463 PMID:15880584 PMID:16826533 MGI:48652 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of_or_within ISO (PMID:15371327) RGD PMID:15371327 NCBI chr10:44,094,140...44,121,134
Ensembl chr10:44,094,140...44,121,133 		JBrowse link
embryonic genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (PMID:12004962) RGD PMID:12004962 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2183225 (PMID:14745966) RGD PMID:14745966 NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152 		JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO MGI:1202879 (PMID:15057272) RGD PMID:15057272 NCBI chr10:36,423,443...36,454,350
Ensembl chr10:36,423,445...36,453,535 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:98507 (PMID:15057272) RGD PMID:15057272 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
embryonic heart tube development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apela apelin receptor early endogenous ligand involved_in ISO
ISS		 (MGI:5909243|PMID:28854362), (MGI:5913613|PMID:28663440)
GO_REF:0000024		 RGD
UniProt		 PMID:28663440 PMID:28854362 GO_REF:0000024 MGI:5909243 MGI:5913613 NCBI chr16:24,694,356...24,703,466
Ensembl chr16:24,694,324...24,703,465 		JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO MGI:1857473|MGI:2687362 (PMID:31219639) RGD PMID:31219639 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111 		JBrowse link
G Chrd chordin involved_in ISO MGI:2157350 (PMID:17685487) RGD PMID:17685487 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2148567 (PMID:18231602)		 Ensembl
RGD		 PMID:18231602 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:1857637|MGI:2158947|MGI:2687362 (PMID:30735130)		 Ensembl
RGD		 PMID:30735130 GO_REF:0000107 NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371 		JBrowse link
G Edn1 endothelin 1 involved_in ISO MGI:1857473|MGI:1857637|MGI:2158947|MGI:2687362 (PMID:24875861), (PMID:30735130), (PMID:31219639) RGD PMID:24875861 PMID:30735130 PMID:31219639 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO		 GO_REF:0000107
MGI:105923|MGI:1857473|MGI:1857637|MGI:2158947|MGI:2179061|MGI:2687362|MGI:3773699 (PMID:20929948), (PMID:24875861), (PMID:30735130), (PMID:31219639)		 Ensembl
RGD		 PMID:20929948 PMID:24875861 PMID:30735130 PMID:31219639 GO_REF:0000107 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2176467|MGI:2686864 (PMID:16720879)		 GO_Central
RGD		 PMID:16720879 GO_REF:0000033 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1347481 (PMID:16678147) RGD PMID:16678147 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1347466 (PMID:16678147) RGD PMID:16678147 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2179443|MGI:2386265 (PMID:9136932), (PMID:9136933) RGD PMID:9136932 PMID:9136933 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:1857177 (PMID:14732399) RGD PMID:14732399 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO MGI:2445466 (PMID:14732399), (PMID:22203979) RGD PMID:14732399 PMID:22203979 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO MGI:2153823 (PMID:9500551) RGD PMID:9500551 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2449914 (PMID:15459110) RGD PMID:15459110 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:3827087|PMID:19000668) RGD PMID:19000668 MGI:3827087 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2684189 (PMID:14500757) RGD PMID:14500757 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO MGI:105923|MGI:1857637|MGI:2158947|MGI:2179061|MGI:2687362 (PMID:30735130) RGD PMID:30735130 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (PMID:16831833) RGD PMID:16831833 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO MGI:1888496 (PMID:15843414) RGD PMID:15843414 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Nkx2-6 NK2 homeobox 6 involved_in ISO (PMID:15649947)
(MGI:3828420|PMID:9545560)		 RGD PMID:9545560 PMID:15649947 MGI:3828420 NCBI chr15:44,443,151...44,447,248
Ensembl chr15:44,443,101...44,447,247 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163) RGD PMID:11311163 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:4340776 (PMID:25220058) RGD PMID:25220058 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710 		JBrowse link
G Plxna4 plexin A4 involved_in ISO MGI:105923|MGI:1857637|MGI:2158947|MGI:2179061|MGI:2687362 (PMID:30735130) RGD PMID:30735130 NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 acts_upstream_of_or_within ISO MGI:4849923 (PMID:21302256) RGD PMID:21302256 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:103559 (PMID:17610846) RGD PMID:17610846 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Sox18 SRY-box transcription factor 18 acts_upstream_of_or_within ISO MGI:107543 (PMID:17610846) RGD PMID:17610846 NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290 		JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within ISO MGI:3579836|MGI:97350 (PMID:15843414) RGD PMID:15843414 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:5538565 (PMID:23844108) RGD PMID:23844108 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tmem94 transmembrane protein 94 acts_upstream_of_or_within ISO MGI:6358488 (PMID:30526868) RGD PMID:30526868 NCBI chr10:100,991,523...101,027,046
Ensembl chr10:100,991,573...101,027,394 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO MGI:4129326 (PMID:21945076) RGD PMID:21945076 NCBI chr 9:92,073,622...92,110,427
Ensembl chr 9:92,073,640...92,108,977 		JBrowse link
embryonic heart tube elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx20 T-box transcription factor 20 involved_in ISO (MGI:3579960|PMID:15901664) RGD PMID:15901664 MGI:3579960 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
embryonic heart tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO (PMID:11076684) RGD PMID:11076684 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
embryonic heart tube left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cimap3 ciliary microtubule associated protein 3 acts_upstream_of_or_within ISO MGI:4819764 (PMID:20643351) RGD PMID:20643351 NCBI chr 2:193,475,785...193,493,092
Ensembl chr 2:193,475,782...193,493,139 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISO (MGI:3054669|PMID:15475956) RGD PMID:15475956 MGI:3054669 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Invs inversin acts_upstream_of_or_within ISO MGI:1856915 (PMID:9192865) RGD PMID:9192865 NCBI chr 5:62,610,916...62,763,813
Ensembl chr 5:62,610,968...62,763,350 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5551355|PMID:24052814)
GO_REF:0000107		 CAFA
RGD
Ensembl		 PMID:24052814 GO_REF:0000024 GO_REF:0000107 MGI:5551355 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1927227 (PMID:9192865)		 Ensembl
RGD		 PMID:9192865 GO_REF:0000107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Pitx2 paired-like homeodomain 2 involved_in ISO (MGI:3783941|PMID:17234970) RGD PMID:17234970 MGI:3783941 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
embryonic heart tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO
IEA		 (PMID:19506109)
GO_REF:0000107		 RGD
Ensembl		 PMID:19506109 GO_REF:0000107 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4354447|PMID:19609448)		 Ensembl
RGD		 PMID:19609448 GO_REF:0000107 MGI:4354447 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5551355|PMID:24052814)
GO_REF:0000024		 Ensembl
RGD
CAFA		 PMID:24052814 GO_REF:0000024 GO_REF:0000107 MGI:5551355 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (MGI:1339460|PMID:10393122) RGD PMID:10393122 MGI:1339460 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:1267127|PMID:9628868)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:9628868 GO_REF:0000024 GO_REF:0000107 MGI:1267127 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in ISO (MGI:4946573|PMID:21305474) RGD PMID:21305474 MGI:4946573 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Tbx20 T-box transcription factor 20 involved_in ISO (MGI:3579960|PMID:15901664) RGD PMID:15901664 MGI:3579960 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
G Tead1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO MGI:103262|MGI:104904 (PMID:18332127) RGD PMID:18332127 NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369 		JBrowse link
G Tead2 TEA domain transcription factor 2 acts_upstream_of_or_within ISO MGI:101876|MGI:103262 (PMID:18332127) RGD PMID:18332127 NCBI chr 1:95,702,366...95,719,186
Ensembl chr 1:95,703,005...95,719,186 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101876|MGI:104904 (PMID:18332127)		 Ensembl
RGD		 PMID:18332127 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
embryonic hemopoiesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2158533|PMID:11806972)		 UniProt
RGD		 PMID:11806972 GO_REF:0000024 MGI:2158533 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
G Ccdc134 coiled-coil domain containing 134 acts_upstream_of_or_within ISO MGI:6117856 (PMID:29115376) RGD PMID:29115376 NCBI chr 7:113,644,557...113,659,050
Ensembl chr 7:113,644,639...113,659,050 		JBrowse link
G Flt3lg Fms related receptor tyrosine kinase 3 ligand involved_in ISO (PMID:21149635) RGD PMID:21149635 NCBI chr 1:95,615,056...95,620,463
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
G Gata1 GATA binding protein 1 acts_upstream_of_or_within ISO MGI:2429992 (PMID:9576834) RGD PMID:9576834 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:102811|MGI:2153826 (PMID:10631184), (PMID:7550312) RGD PMID:7550312 PMID:10631184 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857719 (PMID:16787915)		 Ensembl
RGD		 PMID:16787915 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Il3 interleukin 3 involved_in ISO (PMID:21149635) RGD PMID:21149635 NCBI chr10:38,405,716...38,408,066
Ensembl chr10:38,405,716...38,408,066 		JBrowse link
G Kat6a lysine acetyltransferase 6A acts_upstream_of_or_within ISO (PMID:16702405) RGD PMID:16702405 NCBI chr16:69,084,914...69,165,923
Ensembl chr16:69,084,914...69,163,606 		JBrowse link
G Kdr kinase insert domain receptor involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:74276|PMID:7596435)		 UniProt
Ensembl
RGD		 PMID:7596435 GO_REF:0000024 GO_REF:0000107 MGI:74276 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO (MGI:4820916|PMID:20536544) RGD PMID:20536544 MGI:4820916 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G Kitlg KIT ligand involved_in ISO (PMID:21149635) RGD PMID:21149635 NCBI chr 7:34,896,075...34,977,215
Ensembl chr 7:34,896,053...34,977,214 		JBrowse link
G Klf1 KLF transcription factor 1 acts_upstream_of_or_within ISO MGI:1857557|MGI:1861107 (PMID:19409822), (PMID:7753194) RGD PMID:7753194 PMID:19409822 NCBI chr19:23,250,627...23,253,802
Ensembl chr19:23,250,631...23,253,758 		JBrowse link
G Kmt2a lysine methyltransferase 2A acts_upstream_of_or_within ISO MGI:2177818 (PMID:9639506) RGD PMID:9639506 NCBI chr 8:45,116,763...45,193,320
Ensembl chr 8:45,118,814...45,193,181 		JBrowse link
G Lmo2 LIM domain only 2 acts_upstream_of_or_within ISO MGI:95663 (PMID:10631184) RGD PMID:10631184 NCBI chr 3:90,355,234...90,377,970
Ensembl chr 3:90,365,883...90,377,953 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2684189 (PMID:14500757) RGD PMID:14500757 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO MGI:2155612 (PMID:11468159) RGD PMID:11468159 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594 		JBrowse link
G Runx1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO MGI:3043614 (PMID:16174759) RGD PMID:16174759 NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542 		JBrowse link
G Sh2b3 SH2B adaptor protein 3 acts_upstream_of_or_within ISO (PMID:14612394) RGD PMID:14612394 NCBI chr12:34,731,934...34,753,617
Ensembl chr12:34,731,911...34,753,616 		JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within		 ISO (MGI:3848867|PMID:19200805)
MGI:1857254|MGI:1857566|MGI:2450311|MGI:2661471 (PMID:15677556), (PMID:7624372), (PMID:7830794), (PMID:9269761)		 RGD PMID:7624372 PMID:7830794 PMID:9269761 PMID:15677556 PMID:19200805 MGI:3848867 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA		 (MGI:2678274|PMID:12975342)
GO_REF:0000107		 RGD
Ensembl		 PMID:12975342 GO_REF:0000107 MGI:2678274 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C acts_upstream_of_or_within ISO MGI:4124681 (PMID:22187428) RGD PMID:22187428 NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194 		JBrowse link
G Tpo thyroid peroxidase involved_in IEA
ISO		 GO_REF:0000107
(PMID:21149635)		 Ensembl
RGD		 PMID:21149635 GO_REF:0000107 NCBI chr 6:46,698,402...46,768,199
Ensembl chr 6:46,698,414...46,768,199 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in ISO (MGI:3583527|PMID:14614148) RGD PMID:14614148 MGI:3583527 NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591 		JBrowse link
embryonic hindgut morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dact1 dishevelled-binding antagonist of beta-catenin 1 involved_in ISO (MGI:4457465|PMID:20145239) RGD PMID:20145239 MGI:4457465 NCBI chr 6:89,790,676...89,818,254
Ensembl chr 6:89,790,644...89,817,906 		JBrowse link
G Hoxa13 homeo box A13 IMP RGD PMID:17161201 RGD:1599527 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091 		JBrowse link
G Hoxd13 homeo box D13 IMP RGD PMID:17161201 RGD:1599527 NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963 		JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO MGI:1202879 (PMID:15057272) RGD PMID:15057272 NCBI chr10:36,423,443...36,454,350
Ensembl chr10:36,423,445...36,453,535 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:98507 (PMID:15057272) RGD PMID:15057272 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff3 ALF transcription elongation factor 3 involved_in ISO (PMID:18616733)
(MGI:3819916|PMID:18616733)		 RGD PMID:18616733 MGI:3819916 NCBI chr 9:40,399,099...40,856,716
Ensembl chr 9:40,404,375...40,857,247 		JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within ISO MGI:108359 (PMID:11641221) RGD PMID:11641221 NCBI chr 2:195,231,197...195,241,609
Ensembl chr 2:195,231,197...195,241,609 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:1277097 (PMID:11641221) RGD PMID:11641221 NCBI chr 3:79,611,682...79,648,260
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104903 (PMID:10964473)		 Ensembl
RGD		 PMID:10964473 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:3588650 (PMID:16207732) RGD PMID:16207732 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2148567|MGI:2148594|MGI:2158470 (PMID:12923052), (PMID:18231602)		 Ensembl
RGD		 PMID:12923052 PMID:18231602 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:2450929|MGI:3589208 (PMID:16319892) RGD PMID:16319892 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO MGI:99604 (PMID:16245339) RGD PMID:16245339 NCBI chr 1:200,023,937...200,027,793
Ensembl chr 1:200,024,056...200,025,466 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:95518 (PMID:16245339) RGD PMID:16245339 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gnas GNAS complex locus involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3043361 (PMID:15797856)		 Ensembl
RGD		 PMID:15797856 GO_REF:0000107 NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262
Ensembl chr 3:163,071,417...163,127,262 		JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:88180 (PMID:10964473)		 Ensembl
RGD		 PMID:10964473 GO_REF:0000107 NCBI chr  X:131,868,986...132,236,824
Ensembl chr  X:131,868,990...132,236,798 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1922667|MGI:4415718|MGI:98961 (PMID:15880584), (PMID:18256198), (PMID:19653321) RGD PMID:15880584 PMID:18256198 PMID:19653321 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:2158381 (PMID:17029558) RGD PMID:17029558 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2684189 (PMID:14500757) RGD PMID:14500757 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Mmp13 matrix metallopeptidase 13 IEP RGD PMID:11850435 RGD:1582550 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (PMID:21465616) RGD PMID:21465616 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97168 (PMID:21465616)		 Ensembl
RGD		 PMID:21465616 GO_REF:0000107 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1933835|MGI:2158470 (PMID:16245338) RGD PMID:16245338 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO UniProtKB:Q9WVG7 (MGI:2149941|PMID:11520675), (MGI:4950000|PMID:21262216) RGD PMID:11520675 PMID:21262216 MGI:2149941 MGI:4950000 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Pitx1 paired-like homeodomain 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5299938|PMID:22071103)
MGI:109340 (PMID:18231602)		 RGD PMID:18231602 PMID:22071103 MGI:5299938 NCBI chr17:8,794,134...8,800,292
Ensembl chr17:8,794,134...8,800,291 		JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:107374 (PMID:18231602) RGD PMID:18231602 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO MGI:97858 (PMID:10075839) RGD PMID:10075839 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:97857 (PMID:10075839) RGD PMID:10075839 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904) RGD PMID:17553904 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO MGI:1298218|MGI:3045965 (PMID:18256198) RGD PMID:18256198 NCBI chr 7:74,096,378...74,239,398
Ensembl chr 7:74,103,090...74,238,933 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857796 (PMID:11118883)		 Ensembl
RGD		 PMID:11118883 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2177413|MGI:3605892 (PMID:16192310) RGD PMID:16192310 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:5538565 (PMID:23844108) RGD PMID:23844108 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx4 T-box transcription factor 4 involved_in ISO (PMID:31761294) RGD PMID:31761294 NCBI chr10:70,730,686...70,760,829
Ensembl chr10:70,731,163...70,760,825 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:5882553|MGI:5882555 (PMID:25503409) RGD PMID:25503409 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (MGI:1100098|PMID:8988167) RGD PMID:8988167 MGI:1100098 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902|MGI:2450903 (PMID:12569130) RGD PMID:12569130 NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within		 ISO (PMID:16826533)
MGI:1298218 (PMID:15880584)		 RGD PMID:15880584 PMID:16826533 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within IMP
ISO		 MGI:2182708 (PMID:10835630) RGD PMID:10835630 PMID:19191224 RGD:2312786 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
embryonic limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856658 (PMID:15537664)		 Ensembl
RGD		 PMID:15537664 GO_REF:0000107 NCBI chr19:33,586,739...33,589,481
Ensembl chr19:33,586,745...33,589,461 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:2180721 (PMID:14623241) RGD PMID:14623241 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within ISO MGI:108359 (PMID:9847249) RGD PMID:9847249 NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:103302|MGI:1857137 (PMID:9664686) RGD PMID:9664686 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:1934010|MGI:88180 (PMID:9664686) RGD PMID:9664686 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within ISO MGI:3768254 (PMID:16079159) RGD PMID:16079159 NCBI chr 7:20,524,535...20,743,008
Ensembl chr 7:20,528,100...20,743,111 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 acts_upstream_of_or_within ISO MGI:3039046 (PMID:15030763) RGD PMID:15030763 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:2450929|MGI:3589208 (PMID:16040801) RGD PMID:16040801 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO MGI:95389|MGI:98961 (PMID:15242796) RGD PMID:15242796 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101927|MGI:1330810 (PMID:12112878), (PMID:18326838)		 Ensembl
RGD		 PMID:12112878 PMID:18326838 GO_REF:0000107 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within ISO MGI:101926|MGI:1330810 (PMID:12112878), (PMID:18326838) RGD PMID:12112878 PMID:18326838 NCBI chr 4:34,984,264...34,989,926
Ensembl chr 4:34,984,232...34,991,343 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16229832)		 Ensembl
RGD		 PMID:16229832 GO_REF:0000107 NCBI chr 8:4,189,067...4,412,183
Ensembl chr 8:4,189,257...4,412,183 		JBrowse link
G En1 engrailed homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:75252|PMID:7624797)
MGI:1329040|MGI:1857163|MGI:98961 (PMID:15242796), (PMID:8684466)		 RGD PMID:7624797 PMID:8684466 PMID:15242796 MGI:75252 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G Fbn2 fibrillin 2 acts_upstream_of_or_within ISO MGI:1935122|MGI:1935123|MGI:2157491 (PMID:11285249), (PMID:11350121) RGD PMID:11285249 PMID:11350121 NCBI chr18:51,499,670...51,703,976
Ensembl chr18:51,499,737...51,703,976 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO MGI:99604 (PMID:15328019) RGD PMID:15328019 NCBI chr 1:200,023,937...200,027,793
Ensembl chr 1:200,024,056...200,025,466 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (PMID:17576930) RGD PMID:17576930 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:2176216|MGI:2181474 (PMID:16207751) RGD PMID:16207751 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within ISO MGI:5463442 (PMID:23469164) RGD PMID:23469164 NCBI chr14:12,791,407...13,200,862
Ensembl chr14:12,793,599...13,200,726 		JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within ISO MGI:1855974 (PMID:15542031) RGD PMID:15542031 NCBI chr 3:144,454,316...144,458,508
Ensembl chr 3:144,454,338...144,458,612 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO MGI:2445466 (PMID:15923624) RGD PMID:15923624 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276|MGI:96533|MGI:98297 (PMID:12142027), (PMID:12435361), (PMID:12435627), (PMID:16284117), (PMID:19422820), (PMID:19809516), (PMID:8387379) RGD PMID:8387379 PMID:12142027 PMID:12435361 PMID:12435627 PMID:16284117 More... NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within ISO MGI:3054923 (PMID:12808456) RGD PMID:12808456 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:96770 (PMID:10090727) RGD PMID:10090727 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Hoxa10 homeobox A10 acts_upstream_of_or_within ISO MGI:96192|MGI:96202 (PMID:12869760) RGD PMID:12869760 NCBI chr 4:81,331,591...81,340,878
Ensembl chr 4:81,331,591...81,340,919 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96203 (PMID:14668414) RGD PMID:14668414 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Hoxc10 homeo box C10 acts_upstream_of_or_within ISO MGI:96171|MGI:96202 (PMID:12869760) RGD PMID:12869760 NCBI chr 7:134,103,741...134,108,966
Ensembl chr 7:134,103,643...134,108,966 		JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO MGI:96171|MGI:96192 (PMID:12869760) RGD PMID:12869760 NCBI chr 3:59,594,516...59,597,725
Ensembl chr 3:59,594,516...59,597,725 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (PMID:14668414) RGD PMID:14668414 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Hoxd13 homeo box D13 acts_upstream_of_or_within ISO MGI:1857397 (PMID:11850178) RGD PMID:11850178 NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in NAS PMID:8948600 UniProt PMID:8948600 RGD:69864 NCBI chr 6:131,983,059...132,005,665
Ensembl chr 6:131,983,056...132,005,818 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:98504 (PMID:10090727)		 Ensembl
RGD		 PMID:10090727 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lrp4 LDL receptor related protein 4 acts_upstream_of_or_within ISO MGI:3621893|MGI:3707726|MGI:3707955 (PMID:16207730), (PMID:17119023) RGD PMID:16207730 PMID:17119023 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1921749 (PMID:20359476) RGD PMID:20359476 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 involved_in ISO (MGI:2675975|PMID:12915312) RGD PMID:12915312 MGI:2675975 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5551355|PMID:24052814)
GO_REF:0000024		 Ensembl
RGD
CAFA		 PMID:24052814 GO_REF:0000024 GO_REF:0000107 MGI:5551355 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within ISO (PMID:34486668) RGD PMID:34486668 NCBI chr 1:175,217,680...175,288,521
Ensembl chr 1:175,217,545...175,288,334 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169|MGI:98297 (PMID:15930102), (PMID:19422820) RGD PMID:15930102 PMID:19422820 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO MGI:97168|MGI:98297 (PMID:15930102), (PMID:19422820) RGD PMID:15930102 PMID:19422820 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 IEP RGD PMID:14718386 RGD:1302424 NCBI chr16:6,072,908...6,075,161
Ensembl chr16:6,072,833...6,075,161 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:97364 (PMID:16169548) RGD PMID:16169548 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Notch2 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97363 (PMID:16169548)		 Ensembl
RGD		 PMID:16169548 GO_REF:0000107 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO MGI:1341793 (PMID:16672333) RGD PMID:16672333 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594 		JBrowse link
G Pbx2 PBX homeobox 2 acts_upstream_of_or_within ISO MGI:97495 (PMID:16672333) RGD PMID:16672333 NCBI chr20:4,151,500...4,156,425
Ensembl chr20:4,151,500...4,156,425 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO MGI:4941929 (PMID:23913870) RGD PMID:23913870 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:98218 (PMID:9729491), (PMID:9882503) RGD PMID:9729491 PMID:9882503 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (PMID:9729491), (PMID:9882503) RGD PMID:9729491 PMID:9882503 NCBI chr 3:14,132,574...14,168,533
Ensembl chr 3:14,094,004...14,168,535 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284 (PMID:16169548) RGD PMID:16169548 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (PMID:16169548) RGD PMID:16169548 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174 		JBrowse link
G Ptch1 patched 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1856954|MGI:98297 (PMID:11389830), (PMID:11784021)		 UniProt
RGD		 PMID:11389830 PMID:11784021 GO_REF:0000024 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Sall4 spalt-like transcription factor 4 acts_upstream_of_or_within ISO MGI:102541|MGI:3587949 (PMID:16380715) RGD PMID:16380715 NCBI chr 3:157,474,067...157,491,055
Ensembl chr 3:157,474,642...157,490,822 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:105373|MGI:3053959|MGI:3053960|MGI:95729|MGI:97168|MGI:97169 (PMID:11389830), (PMID:15315763), (PMID:19422820)		 UniProt
RGD		 PMID:11389830 PMID:15315763 PMID:19422820 GO_REF:0000024 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within ISO MGI:3605739|MGI:3628798 (PMID:16537395), (PMID:17481601) RGD PMID:16537395 PMID:17481601 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (PMID:12435627) RGD PMID:12435627 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Sp8 Sp8 transcription factor involved_in
acts_upstream_of_or_within		 ISO (MGI:3526745|PMID:15358670)
MGI:2684137 (PMID:14597661)		 RGD PMID:14597661 PMID:15358670 MGI:3526745 NCBI chr 6:139,816,258...139,818,865
Ensembl chr 6:139,814,819...139,823,168
Ensembl chr 6:139,814,819...139,823,168 		JBrowse link
G Sp9 Sp9 transcription factor involved_in ISO (MGI:3526745|PMID:15358670) RGD PMID:15358670 MGI:3526745 NCBI chr 3:58,146,826...58,149,357
Ensembl chr 3:58,146,826...58,149,357 		JBrowse link
G Tbx4 T-box transcription factor 4 acts_upstream_of_or_within ISO MGI:2663716 (PMID:12736212) RGD PMID:12736212 NCBI chr10:70,730,686...70,760,829
Ensembl chr10:70,731,163...70,760,825 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:8988164)
MGI:2139360 (PMID:12736217), (PMID:16380715)
GO_REF:0000024		 RGD
UniProt		 PMID:8988164 PMID:12736217 PMID:16380715 GO_REF:0000024 NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (MGI:894212|PMID:9217007) RGD PMID:9217007 MGI:894212 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:101926|MGI:101927|MGI:1934580 (PMID:10227293), (PMID:18326838) RGD PMID:10227293 PMID:18326838 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857265|MGI:2157489|MGI:3038818 (PMID:11350121), (PMID:12142027), (PMID:15030764) RGD PMID:11350121 PMID:12142027 PMID:15030764 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within ISO MGI:5315747|MGI:5315748 (PMID:22228095) RGD PMID:22228095 NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617 (PMID:10021340) RGD PMID:10021340 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI:1329040|MGI:95389 (PMID:15242796) RGD PMID:15242796 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI:1856943 RGD MGI:61278 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
embryonic liver development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A2m alpha-2-macroglobulin IEP RGD PMID:2450021 RGD:10046029 NCBI chr 4:154,897,770...154,947,787
Ensembl chr 4:154,897,877...154,947,786 		JBrowse link
G Ccdc134 coiled-coil domain containing 134 acts_upstream_of_or_within ISO MGI:6117856 (PMID:29115376) RGD PMID:29115376 NCBI chr 7:113,644,557...113,659,050
Ensembl chr 7:113,644,639...113,659,050 		JBrowse link
G Gamt guanidinoacetate N-methyltransferase IEP RGD PMID:15918910 RGD:1599815 NCBI chr 7:9,448,590...9,451,413
Ensembl chr 7:9,448,628...9,451,778 		JBrowse link
G Gatm glycine amidinotransferase IEP RGD PMID:15918910 RGD:1599815 NCBI chr 3:109,658,919...109,675,508
Ensembl chr 3:109,658,951...109,684,129 		JBrowse link
G Insr insulin receptor IEP RGD PMID:1448116 RGD:14700803 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO (MGI:74339|PMID:7600998) RGD PMID:7600998 MGI:74339 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
embryonic lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fendrr FOXF1 adjacent non-coding developmental regulatory RNA acts_upstream_of_or_within ISO MGI:5563522 (PMID:25909911) RGD PMID:25909911 NCBI chr19:49,127,225...49,152,780
Ensembl chr19:49,121,214...49,153,240 		JBrowse link
G Nkx2-1 NK2 homeobox 1 IEP RGD PMID:23894445 RGD:12911205 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Pdgfa platelet derived growth factor subunit A involved_in ISO (MGI:1098909|PMID:9374392) RGD PMID:9374392 MGI:1098909 NCBI chr12:15,645,549...15,667,056
Ensembl chr12:15,645,541...15,666,497 		JBrowse link
G Tbx4 T-box transcription factor 4 involved_in ISO (PMID:31761294) RGD PMID:31761294 NCBI chr10:70,730,686...70,760,829
Ensembl chr10:70,731,163...70,760,825 		JBrowse link
embryonic morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:2176835|MGI:3041440 (PMID:15716346) RGD PMID:15716346 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp8b bone morphogenetic protein 8b involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:135,386,058...135,411,337
Ensembl chr 5:135,386,311...135,405,197 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158390|MGI:2176835 (PMID:15716346) RGD PMID:15716346 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G C9h2orf49 similar to human chromosome 2 open reading frame 49 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:45,371,396...45,382,123
Ensembl chr 9:45,371,430...45,382,120 		JBrowse link
G Cdon cell adhesion associated, oncogene regulated acts_upstream_of_or_within ISO MGI:95655 (PMID:17504941) RGD PMID:17504941 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033 		JBrowse link
G Dact1 dishevelled-binding antagonist of beta-catenin 1 acts_upstream_of_or_within ISO MGI:4360072 (PMID:19701191) RGD PMID:19701191 NCBI chr 6:89,790,676...89,818,254
Ensembl chr 6:89,790,644...89,817,906 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (PMID:10926768) RGD PMID:10926768 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3796818|PMID:18448090)		 UniProt
RGD		 PMID:18448090 GO_REF:0000024 MGI:3796818 NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841 		JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:74275|PMID:7596436)		 UniProt
RGD		 PMID:7596436 GO_REF:0000024 MGI:74275 NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:1926387|MGI:3711070 (PMID:17504941) RGD PMID:17504941 NCBI chr17:4,482,168...4,485,153 JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2179443|MGI:2386265 (PMID:9136932), (PMID:9136933) RGD PMID:9136932 PMID:9136933 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:8387379) RGD PMID:8387379 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Hnf1b HNF1 homeobox B IDA RGD PMID:12860991 RGD:1599302 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:707955|PMID:9165122)		 UniProt
Ensembl
RGD		 PMID:9165122 GO_REF:0000024 GO_REF:0000107 MGI:707955 NCBI chr 9:86,735,793...86,756,638
Ensembl chr 9:86,742,102...86,755,108 		JBrowse link
G Msx3 msh homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:194,839,041...194,842,209
Ensembl chr 1:194,839,041...194,841,969 		JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (PMID:16492970), (PMID:17881493) RGD PMID:16492970 PMID:17881493 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within ISO MGI:3605739 (PMID:16141225) RGD PMID:16141225 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in ISO (MGI:4453264|PMID:20178780) RGD PMID:20178780 MGI:4453264 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within ISO MGI:1344407 (PMID:16598713) RGD PMID:16598713 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:1344313 (PMID:16598713) RGD PMID:16598713 NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157 		JBrowse link
embryonic nail plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO MGI:3050103 (PMID:23439395) RGD PMID:23439395 NCBI chr 7:70,055,012...70,086,781
Ensembl chr 7:70,055,068...70,086,776 		JBrowse link
G Msx1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:11369996)
MGI:97169 (PMID:21465616)
(MGI:3688967|PMID:11369996)		 RGD PMID:11369996 PMID:21465616 MGI:3688967 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97168 (PMID:21465616)		 Ensembl
RGD		 PMID:21465616 GO_REF:0000107 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:4941929 (PMID:23913870)		 Ensembl
RGD		 PMID:23913870 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
embryonic neurocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1917550 (PMID:27395007) RGD PMID:27395007 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO MGI:3531090|MGI:99604 (PMID:27395007) RGD PMID:27395007 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:27395007) RGD PMID:27395007 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839485 (PMID:20589884) RGD PMID:20589884 NCBI chr  X:66,404,807...66,427,775
Ensembl chr  X:66,404,760...66,428,387 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO (MGI:5468075|PMID:23267094) RGD PMID:23267094 MGI:5468075 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905 		JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:3589383 (PMID:16020517) RGD PMID:16020517 NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 IDA RGD PMID:11002343 RGD:1579866 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 IDA RGD PMID:11002343 RGD:1579866 NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:19286674) RGD PMID:19286674 NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
embryonic organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid2 AT-rich interaction domain 2 acts_upstream_of_or_within ISO MGI:4433303 (PMID:25299188) RGD PMID:25299188 NCBI chr 7:127,447,192...127,565,987
Ensembl chr 7:127,447,278...127,563,512 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 ISO (MGI:2175930|PMID:11854453)
MGI:2158342|MGI:2158390 (PMID:17359964)		 RGD PMID:11854453 PMID:17359964 MGI:2175930 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO MGI:2148567|MGI:3841145 (PMID:30478225) RGD PMID:30478225 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Ddit3 DNA-damage inducible transcript 3 IEP RGD PMID:10419986 RGD:62382 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201 		JBrowse link
G Epn1 Epsin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1333766 (PMID:19666558)		 Ensembl
RGD		 PMID:19666558 GO_REF:0000107 NCBI chr 1:68,742,491...68,760,570
Ensembl chr 1:68,742,789...68,758,874 		JBrowse link
G Epn2 epsin 2 acts_upstream_of_or_within ISO MGI:1333763 (PMID:19666558) RGD PMID:19666558 NCBI chr10:46,197,785...46,259,673
Ensembl chr10:46,197,785...46,259,642 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit IEP RGD PMID:11425516 RGD:2313673 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit IEP RGD PMID:11425516 RGD:2313673 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEP
IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central
RGD		 PMID:11425516 GO_REF:0000033 GO_REF:0000118, RGD:2313673 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Fendrr FOXF1 adjacent non-coding developmental regulatory RNA acts_upstream_of_or_within ISO (PMID:24381249) RGD PMID:24381249 NCBI chr19:49,127,225...49,152,780
Ensembl chr19:49,121,214...49,153,240 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153790 (PMID:9435295) RGD PMID:9435295 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Gata3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2181200 (PMID:11135239)		 GO_Central
RGD		 PMID:11135239 GO_REF:0000033 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IEA
ISO		 GO_REF:0000107
(MGI:5440338|PMID:22998873)		 Ensembl
RGD		 PMID:22998873 GO_REF:0000107 MGI:5440338 NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4942413 (PMID:21377456) RGD PMID:21377456 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2177762 (PMID:16364283) RGD PMID:16364283 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Hoxb7 homeo box B7 involved_in ISO (PMID:2885844) RGD PMID:2885844 NCBI chr10:81,252,616...81,256,034
Ensembl chr10:81,252,553...81,256,034 		JBrowse link
G Hoxd4 homeo box D4 involved_in ISO (PMID:2879245) RGD PMID:2879245 NCBI chr 3:59,614,464...59,634,042
Ensembl chr 3:59,614,464...59,631,528 		JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in ISO (MGI:3811685|PMID:18669642) RGD PMID:18669642 MGI:3811685 NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017 		JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within ISO MGI:4126347|MGI:5516011 (PMID:23028370) RGD PMID:23028370 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062 		JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 IEP RGD PMID:12672019 RGD:9587841 NCBI chr18:64,174,002...64,240,795
Ensembl chr18:64,174,002...64,240,794 		JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 IEP RGD PMID:12672019 RGD:9587841 NCBI chr 7:9,312,961...9,320,166
Ensembl chr 7:9,313,098...9,320,165 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839485 (PMID:20589884) RGD PMID:20589884 NCBI chr  X:66,404,807...66,427,775
Ensembl chr  X:66,404,760...66,428,387 		JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within ISO MGI:3587937 (PMID:17183527) RGD PMID:17183527 NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897 		JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO MGI:5495930 (PMID:23657012) RGD PMID:23657012 NCBI chr 1:176,665,076...176,689,053
Ensembl chr 1:176,665,076...176,688,990 		JBrowse link
G Pbx1 PBX homeobox 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2155612 (PMID:15581866)		 GO_Central
RGD		 PMID:15581866 GO_REF:0000033 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594 		JBrowse link
G Pbx2 PBX homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,151,500...4,156,425
Ensembl chr20:4,151,500...4,156,425 		JBrowse link
G Pbx3 PBX homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:17,488,691...17,682,412
Ensembl chr 3:17,488,693...17,682,791 		JBrowse link
G Pbx4 PBX homeobox 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,555,089...19,590,054
Ensembl chr16:19,555,090...19,590,014 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISO (MGI:1338343|PMID:10375497) RGD PMID:10375497 MGI:1338343 NCBI chr18:54,499,962...54,538,840
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit IEP RGD PMID:11425516 RGD:2313673 NCBI chr12:46,345,420...46,393,984
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:2144467 (PMID:24302887) RGD PMID:24302887 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein IEP RGD PMID:11425516 RGD:2313673 NCBI chr 5:70,090,232...70,128,340
Ensembl chr 5:70,090,232...70,128,319 		JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase acts_upstream_of_or_within ISO MGI:98834 (PMID:17470788) RGD PMID:17470788 NCBI chr 1:177,503,988...177,537,397
Ensembl chr 1:177,503,313...177,535,678 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) RGD PMID:17473173 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (PMID:20133625) RGD PMID:20133625 NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (PMID:15680353) RGD PMID:15680353 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO MGI:2144467 (PMID:24302887) RGD PMID:24302887 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:2179440 (PMID:19913509) RGD PMID:19913509 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:3589809|MGI:3625175 (PMID:17522155) RGD PMID:17522155 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Sp2 Sp2 transcription factor acts_upstream_of_or_within ISO MGI:4441280 (PMID:20221402) RGD PMID:20221402 NCBI chr10:81,940,580...81,970,040
Ensembl chr10:81,940,587...81,970,548 		JBrowse link
G Syf2 SYF2 pre-mRNA-splicing factor acts_upstream_of_or_within ISO MGI:3904866 (PMID:22448250) RGD PMID:22448250 NCBI chr 5:147,156,492...147,164,416
Ensembl chr 5:147,156,480...147,164,414 		JBrowse link
G Tead1 TEA domain transcription factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369 		JBrowse link
G Tead2 TEA domain transcription factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:95,702,366...95,719,186
Ensembl chr 1:95,703,005...95,719,186 		JBrowse link
G Tead3 TEA domain transcription factor 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:6,392,053...6,411,446
Ensembl chr20:6,392,053...6,411,446 		JBrowse link
G Tead4 TEA domain transcription factor 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323 		JBrowse link
G Thra thyroid hormone receptor alpha IEP RGD PMID:17496154 RGD:2314319 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936 		JBrowse link
G Thrb thyroid hormone receptor beta IEP RGD PMID:17496154 RGD:2314319 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C acts_upstream_of_or_within ISO MGI:4124681 (PMID:22187428) RGD PMID:22187428 NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:894835 (PMID:17470788)		 Ensembl
RGD		 PMID:17470788 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Utp25 UTP25 small subunit processome component involved_in ISS
ISO		 GO_REF:0000024
(PMID:27657329)		 UniProt
RGD		 PMID:27657329 GO_REF:0000024 NCBI chr13:104,630,390...104,651,681
Ensembl chr13:104,630,391...104,651,662 		JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO MGI:3877328 (PMID:23028370) RGD PMID:23028370 NCBI chr  Y:942,838...1,105,313
Ensembl chr  Y:924,168...1,103,422 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within ISO MGI:105373|MGI:108075 (PMID:24302887) RGD PMID:24302887 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113 		JBrowse link
G Wdr48 WD repeat domain 48 acts_upstream_of_or_within ISO MGI:3877670 (PMID:24001775) RGD PMID:24001775 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (PMID:18367557) RGD PMID:18367557 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO MGI:3050540 (PMID:15226444) RGD PMID:15226444 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 acts_upstream_of_or_within ISO MGI:3587413 (PMID:16103912) RGD PMID:16103912 NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205 		JBrowse link
embryonic organ morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153818 (PMID:15843416) RGD PMID:15843416 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Foxe1 forkhead box E1 acts_upstream_of_or_within ISO MGI:2181780 (PMID:9697704) RGD PMID:9697704 NCBI chr 5:60,630,027...60,632,835
Ensembl chr 5:60,630,027...60,632,835 		JBrowse link
G Hoxc4 homeo box C4 acts_upstream_of_or_within ISO MGI:2150683 (PMID:8660891) RGD PMID:8660891 NCBI chr 7:134,135,279...134,173,133
Ensembl chr 7:134,170,591...134,173,133 		JBrowse link
G Neurod1 neuronal differentiation 1 involved_in ISO (MGI:1096974|PMID:9308961) RGD PMID:9308961 MGI:1096974 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) RGD PMID:15994349 MGI:3604178 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2386105|MGI:3611933 (PMID:16287714) RGD PMID:16287714 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
embryonic pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (PMID:10049573) RGD PMID:10049573 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Disp1 dispatched RND transporter family member 1 acts_upstream_of_or_within ISO MGI:2672101 (PMID:12372301) RGD PMID:12372301 NCBI chr13:94,720,928...94,866,695
Ensembl chr13:94,720,928...94,866,702 		JBrowse link
G Dop1b DOP1 leucine zipper like protein B involved_in ISO (PMID:10950924) RGD PMID:10950924 NCBI chr11:33,024,376...33,125,931
Ensembl chr11:33,024,411...33,125,931 		JBrowse link
G Efnb1 ephrin B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3039289 (PMID:15037550)		 Ensembl
RGD		 PMID:15037550 GO_REF:0000107 NCBI chr  X:64,257,351...64,270,158
Ensembl chr  X:64,257,351...64,270,157 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:1352955|PMID:10655590)		 UniProt
Ensembl
RGD		 PMID:10655590 GO_REF:0000024 GO_REF:0000107 MGI:1352955 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1927833|MGI:3629660 (PMID:16618415), (PMID:17522155) RGD PMID:16618415 PMID:17522155 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811 (PMID:16618415) RGD PMID:16618415 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (PMID:18582859) RGD PMID:18582859 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2443342 (PMID:10529425)		 UniProt
RGD		 PMID:10529425 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:4415718 (PMID:19653321) RGD PMID:19653321 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Meis1 Meis homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265 		JBrowse link
G Meis2 Meis homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:102,742,904...102,944,833
Ensembl chr 3:102,742,900...102,949,696 		JBrowse link
G Meis3 Meis homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:76,861,267...76,872,691
Ensembl chr 1:76,861,924...76,872,691 		JBrowse link
G Nanog Nanog homeobox involved_in ISO (MGI:3042348|PMID:15108323) RGD PMID:15108323 MGI:3042348 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163) RGD PMID:11311163 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO MGI:1857063 (PMID:15550757) RGD PMID:15550757 NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402 		JBrowse link
G Ooep oocyte expressed protein acts_upstream_of_or_within ISO (PMID:18191828) RGD PMID:18191828 NCBI chr 8:79,223,388...79,224,554
Ensembl chr 8:79,223,375...79,224,541 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856621|MGI:99783 (PMID:10529425)		 Ensembl
RGD		 PMID:10529425 GO_REF:0000107 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464 		JBrowse link
G Ripply1 ripply transcriptional repressor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:103,436,731...103,440,904
Ensembl chr  X:103,436,729...103,443,349 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:87,974,444...87,979,002
Ensembl chr 8:87,974,776...87,978,969 		JBrowse link
G Ripply3 ripply transcriptional repressor 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:33,648,471...33,656,587
Ensembl chr11:33,648,486...33,656,584 		JBrowse link
G Satb2 SATB homeobox 2 acts_upstream_of_or_within ISO MGI:3692768 (PMID:16751105) RGD PMID:16751105 NCBI chr 9:58,348,027...58,534,256
Ensembl chr 9:58,350,246...58,530,707 		JBrowse link
G Sim2 SIM bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:2180881 (PMID:12024028) RGD PMID:12024028 NCBI chr11:33,414,218...33,453,663
Ensembl chr11:33,414,218...33,453,663 		JBrowse link
G Smad1 SMAD family member 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO MGI:1201674 (PMID:15183723) RGD PMID:15183723 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (PMID:15183723) RGD PMID:15183723 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smad5 SMAD family member 5 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:3769332 (PMID:17984226) RGD PMID:17984226 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI:2182708 (PMID:10835630) RGD PMID:10835630 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:2180720 (PMID:16397896) RGD PMID:16397896 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arnt aryl hydrocarbon receptor nuclear translocator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857680 (PMID:16287860)		 Ensembl
RGD		 PMID:16287860 GO_REF:0000107 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580 		JBrowse link
G Bptf bromodomain PHD finger transcription factor acts_upstream_of_or_within ISO MGI:3823037 (PMID:18794365) RGD PMID:18794365 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha acts_upstream_of_or_within ISO MGI:88373 (PMID:15509779) RGD PMID:15509779 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:99480 (PMID:15509779)		 Ensembl
RGD		 PMID:15509779 GO_REF:0000107 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (PMID:16579983) RGD PMID:16579983 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Csf2 colony stimulating factor 2 acts_upstream_of_or_within ISO MGI:1930997 (PMID:19228596) RGD PMID:19228596 NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199 		JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within ISO MGI:1856402 (PMID:7618084) RGD PMID:7618084 NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:106918 (PMID:16287860)		 Ensembl
RGD		 PMID:16287860 GO_REF:0000107 NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228 		JBrowse link
G Esrrb estrogen-related receptor beta acts_upstream_of_or_within ISO MGI:1857422 (PMID:9285590) RGD PMID:9285590 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Foxd3 forkhead box D3 acts_upstream_of_or_within ISO MGI:2388719 (PMID:16039639) RGD PMID:16039639 NCBI chr 5:114,335,084...114,337,450
Ensembl chr 5:114,335,408...114,336,817 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:1857743 (PMID:9043071) RGD PMID:9043071 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2137552|MGI:3706565 (PMID:24855001) RGD PMID:24855001 NCBI chr 6:69,181,429...69,268,045
Ensembl chr 6:69,181,436...69,268,053 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:109169|MGI:2179429 (PMID:16287860)		 Ensembl
RGD		 PMID:16287860 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Hsf1 heat shock transcription factor 1 acts_upstream_of_or_within ISO MGI:2155444 (PMID:10545106) RGD PMID:10545106 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Igf2 insulin-like growth factor 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2181513|PMID:12087403)		 UniProt
RGD		 PMID:12087403 GO_REF:0000024 MGI:2181513 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2684189 (PMID:14500757) RGD PMID:14500757 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Mir127 microRNA 127 acts_upstream_of_or_within ISO MGI:5789789 (PMID:26138477) RGD PMID:26138477 NCBI chr 6:128,546,215...128,546,311
Ensembl chr 6:128,546,215...128,546,311 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:1856970|MGI:2158730 (PMID:11456449) RGD PMID:11456449 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISS
ISO		 GO_REF:0000024
(MGI:3039044|PMID:15084468)		 UniProt
RGD		 PMID:15084468 GO_REF:0000024 MGI:3039044 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO (MGI:4836293|PMID:20862291) RGD PMID:20862291 MGI:4836293 NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in
acts_upstream_of_or_within		 ISO (MGI:4836293|PMID:20862291)
MGI:1860840 (PMID:16301212)		 RGD PMID:16301212 PMID:20862291 MGI:4836293 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO MGI:3605483 (PMID:15750184) RGD PMID:15750184 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488 		JBrowse link
G Rtl1 retrotransposon-like 1 acts_upstream_of_or_within ISO MGI:3776873 (PMID:26138477), (PMID:28111885) RGD PMID:26138477 PMID:28111885 NCBI chr 6:128,543,904...128,549,384
Ensembl chr 6:128,543,939...128,549,182 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 acts_upstream_of_or_within ISO MGI:4849923 (PMID:21302256) RGD PMID:21302256 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within ISO MGI:3581891 (PMID:15964823) RGD PMID:15964823 NCBI chr 3:106,231,082...106,244,121
Ensembl chr 3:106,231,444...106,244,119 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in ISO MGI:3606185 (PMID:28893950) RGD PMID:28893950 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376 		JBrowse link
G Tfeb transcription factor EB involved_in ISO (MGI:1306865|PMID:9806910) RGD PMID:9806910 MGI:1306865 NCBI chr 9:13,198,890...13,254,726
Ensembl chr 9:13,198,891...13,254,714 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO MGI:4456438 (PMID:20178780) RGD PMID:20178780 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
G Ttpa alpha tocopherol transfer protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2386172 (PMID:16014812)		 Ensembl
RGD		 PMID:16014812 GO_REF:0000107 NCBI chr 5:33,497,537...33,518,936
Ensembl chr 5:33,497,137...33,518,073 		JBrowse link
embryonic placenta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1c cyclin-dependent kinase inhibitor 1C acts_upstream_of_or_within ISO MGI:1933758|MGI:3840687 (PMID:19276117) RGD PMID:19276117 NCBI chr 1:198,655,394...198,658,097
Ensembl chr 1:198,655,407...198,658,048 		JBrowse link
G Igf2 insulin-like growth factor 2 involved_in ISO (MGI:5908476|PMID:28522536) RGD PMID:28522536 MGI:5908476 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (PMID:20133625) RGD PMID:20133625 NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within ISO MGI:1928907 (PMID:22110054) RGD PMID:22110054 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:2153830 (PMID:7530222) RGD PMID:7530222 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:2387443 (PMID:11543617) RGD PMID:11543617 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
G Zfp568 zinc finger protein 568 involved_in
acts_upstream_of_or_within		 ISO (MGI:5908476|PMID:28522536)
MGI:3578538 (PMID:21094155)		 RGD PMID:21094155 PMID:28522536 MGI:5908476 NCBI chr 1:85,206,643...85,257,759
Ensembl chr 1:85,207,579...85,257,505 		JBrowse link
embryonic process involved in female pregnancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg2 ATP binding cassette subfamily G member 2 IDA RGD PMID:18450391 RGD:2315582 NCBI chr 4:87,676,241...87,802,757
Ensembl chr 4:87,745,319...87,802,409 		JBrowse link
G Acsl4 acyl-CoA synthetase long-chain family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2182854 (PMID:11409893)		 Ensembl
RGD		 PMID:11409893 GO_REF:0000107 NCBI chr  X:105,942,794...106,006,573
Ensembl chr  X:105,942,799...106,006,427 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (PMID:16579983) RGD PMID:16579983 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5908305|PMID:28295343)		 UniProt
RGD		 PMID:28295343 GO_REF:0000024 MGI:5908305 NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733 		JBrowse link
G Hsf1 heat shock transcription factor 1 acts_upstream_of_or_within ISO MGI:2155444 (PMID:10545106) RGD PMID:10545106 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2153821 (PMID:10022836) RGD PMID:10022836 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:1856970|MGI:2158730 (PMID:11456449) RGD PMID:11456449 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Tle6 TLE family member 6, subcortical maternal complex member involved_in ISO (PMID:26537248) RGD PMID:26537248 NCBI chr 7:8,107,050...8,118,639
Ensembl chr 7:8,107,207...8,118,639 		JBrowse link
embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2653120 (PMID:19754878)		 Ensembl
RGD		 PMID:19754878 GO_REF:0000107 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4818711|PMID:20579985)		 Ensembl
RGD		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO
ISS		 (MGI:3772525|PMID:18094249)
GO_REF:0000024		 RGD
UniProt		 PMID:18094249 GO_REF:0000024 MGI:3772525 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:4415718 (PMID:19653321) RGD PMID:19653321 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:12692551)
(MGI:2658694|PMID:12692551)		 RGD PMID:12692551 MGI:2658694 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:1344892|PMID:10469643) RGD PMID:10469643 MGI:1344892 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
embryonic skeletal joint development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO MGI:2682061 (PMID:21185280) RGD PMID:21185280 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (PMID:17191253) RGD PMID:17191253 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:18565096) RGD PMID:18565096 NCBI chr 3:154,240,395...154,252,690
Ensembl chr 3:154,240,391...154,252,690 		JBrowse link
embryonic skeletal joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within ISO MGI:1856035|MGI:1856036 RGD MGI:48782 NCBI chr10:15,163,477...15,215,615
Ensembl chr10:15,163,684...15,215,615 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:103302|MGI:1857137 (PMID:9664686)		 Ensembl
RGD		 PMID:9664686 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:1934010|MGI:88180 (PMID:9664686) RGD PMID:9664686 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in ISO
IEA		 (PMID:16752401)
GO_REF:0000107		 RGD
Ensembl		 PMID:16752401 GO_REF:0000107 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96193|MGI:96203 (PMID:20978074) RGD PMID:20978074 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within ISO MGI:96172|MGI:96203 (PMID:20978074) RGD PMID:20978074 NCBI chr 7:134,091,224...134,094,738
Ensembl chr 7:134,091,552...134,094,738 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172|MGI:96193 (PMID:20978074) RGD PMID:20978074 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2658730 (PMID:18772348)		 Ensembl
RGD		 PMID:18772348 GO_REF:0000107 NCBI chr 8:108,250,668...108,254,519
Ensembl chr 8:108,250,667...108,260,210 		JBrowse link
G Nog noggin involved_in ISO
IEA		 (PMID:16151340)
GO_REF:0000107		 RGD
Ensembl		 PMID:16151340 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Shox2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3626291 (PMID:18514492)		 Ensembl
RGD		 PMID:18514492 GO_REF:0000107 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in ISO
IEA		 UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216)
GO_REF:0000107		 RGD
Ensembl		 PMID:21262216 GO_REF:0000107 MGI:4950000 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
embryonic skeletal system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861779 (PMID:7885474)		 Ensembl
RGD		 PMID:7885474 GO_REF:0000107 NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:99161 (PMID:11290297) RGD PMID:11290297 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:2158495 (PMID:16712836) RGD PMID:16712836 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Cdk20 cyclin-dependent kinase 20 acts_upstream_of_or_within ISO MGI:6113512 (PMID:28817564) RGD PMID:28817564 NCBI chr17:701,122...707,869
Ensembl chr17:701,124...707,826 		JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO (PMID:18553566) RGD PMID:18553566 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Deaf1 DEAF1 transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:3029622|PMID:14966286)		 UniProt
RGD		 PMID:14966286 GO_REF:0000024 MGI:3029622 NCBI chr 1:196,401,857...196,435,541
Ensembl chr 1:196,401,857...196,435,541 		JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO (PMID:19247431) RGD PMID:19247431 NCBI chr 6:128,410,216...128,417,518
Ensembl chr 6:128,410,316...128,417,522 		JBrowse link
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857826|MGI:94902 (PMID:9187081)		 Ensembl
RGD		 PMID:9187081 GO_REF:0000107 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within ISO MGI:1857828|MGI:94901 (PMID:9187081) RGD PMID:9187081 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597 		JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 acts_upstream_of_or_within ISO MGI:3512139 (PMID:16387292) RGD PMID:16387292 NCBI chr 1:223,317,543...223,324,131
Ensembl chr 1:223,317,642...223,324,131 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO		 GO_REF:0000107
MGI:103580 (PMID:19017795)		 Ensembl
RGD		 PMID:19017795 GO_REF:0000107 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Etl4 enhancer trap locus 4 involved_in ISO (MGI:3614233|PMID:16204209) RGD PMID:16204209 MGI:3614233 NCBI chr17:82,841,075...83,304,868
Ensembl chr17:82,495,041...83,304,715 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (PMID:17544391) RGD PMID:17544391 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:3711070|MGI:98297 (PMID:17504941) RGD PMID:17504941 NCBI chr17:4,482,168...4,485,153 JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:105923 (PMID:19017795)		 Ensembl
RGD		 PMID:19017795 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Hoxa2 homeobox A2 involved_in ISO (PMID:25889273) RGD PMID:25889273 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
G Hoxa3 homeobox A3 acts_upstream_of_or_within ISO MGI:96207 (PMID:7913519) RGD PMID:7913519 NCBI chr 4:81,269,243...81,313,218
Ensembl chr 4:81,269,243...81,313,218 		JBrowse link
G Hoxa5 homeo box A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000117
MGI:96186|MGI:96196 (PMID:17626057)		 UniProt
RGD		 PMID:17626057 GO_REF:0000117 NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234 		JBrowse link
G Hoxa6 homeobox A6 acts_upstream_of_or_within ISO MGI:96187|MGI:96197 (PMID:17626057) RGD PMID:17626057 NCBI chr 4:81,304,918...81,313,184
Ensembl chr 4:81,306,407...81,308,850 		JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within ISO MGI:2150411|MGI:96190|MGI:96199|MGI:96210 (PMID:17626057), (PMID:8625797), (PMID:9013929) RGD PMID:8625797 PMID:9013929 PMID:17626057 NCBI chr 4:81,323,235...81,329,344
Ensembl chr 4:81,323,382...81,326,358 		JBrowse link
G Hoxb5 homeo box B5 acts_upstream_of_or_within ISO MGI:96177|MGI:96196 (PMID:17626057) RGD PMID:17626057 NCBI chr10:81,269,372...81,271,580
Ensembl chr10:81,269,372...81,271,580 		JBrowse link
G Hoxb6 homeo box B6 acts_upstream_of_or_within ISO MGI:2151485|MGI:96178|MGI:96197 (PMID:17626057), (PMID:7828847) RGD PMID:7828847 PMID:17626057 NCBI chr10:81,258,726...81,267,458
Ensembl chr10:81,265,056...81,267,449 		JBrowse link
G Hoxb9 homeo box B9 acts_upstream_of_or_within ISO MGI:2150429|MGI:96180|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96199|MGI:96210 (PMID:10885747), (PMID:17626057), (PMID:9013929) RGD PMID:9013929 PMID:10885747 PMID:17626057 NCBI chr10:81,237,312...81,240,818
Ensembl chr10:81,237,312...81,240,818 		JBrowse link
G Hoxc5 homeo box C5 acts_upstream_of_or_within ISO MGI:96177|MGI:96186 (PMID:17626057) RGD PMID:17626057 NCBI chr 7:134,150,988...134,154,410
Ensembl chr 7:134,150,988...134,154,410 		JBrowse link
G Hoxc6 homeo box C6 acts_upstream_of_or_within ISO MGI:96178|MGI:96187 (PMID:17626057) RGD PMID:17626057 NCBI chr 7:134,138,017...134,148,899
Ensembl chr 7:134,135,502...134,148,392 		JBrowse link
G Hoxc9 homeobox C9 acts_upstream_of_or_within ISO MGI:96180|MGI:96190|MGI:96210 (PMID:17626057) RGD PMID:17626057 NCBI chr 7:134,118,817...134,121,497
Ensembl chr 7:134,118,817...134,121,492 		JBrowse link
G Hoxd1 homeo box D1 acts_upstream_of_or_within ISO MGI:3616015 (PMID:11511348) RGD PMID:11511348 NCBI chr 3:59,665,629...59,667,769
Ensembl chr 3:59,665,629...59,667,769 		JBrowse link
G Hoxd9 homeo box D9 acts_upstream_of_or_within ISO MGI:2150414|MGI:96180|MGI:96190|MGI:96199 (PMID:17626057), (PMID:8625797) RGD PMID:8625797 PMID:17626057 NCBI chr 3:59,600,575...59,602,755
Ensembl chr 3:59,600,575...59,602,754 		JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 acts_upstream_of_or_within ISO MGI:5056371 (PMID:21515572) RGD PMID:21515572 NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017 		JBrowse link
G LOC103692127 homeobox protein Hox-A5 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G Mbtd1 mbt domain containing 1 acts_upstream_of_or_within ISO MGI:4940055 (PMID:21252303) RGD PMID:21252303 NCBI chr10:78,839,140...78,895,413
Ensembl chr10:78,839,036...78,893,720 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4887578 (PMID:21045211)		 Ensembl
RGD		 PMID:21045211 GO_REF:0000107 NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655 		JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within ISO (PMID:34486668) RGD PMID:34486668 NCBI chr 1:175,217,680...175,288,521
Ensembl chr 1:175,217,545...175,288,334 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO MGI:1857926|MGI:1931319 (PMID:10449756), (PMID:10572046) RGD PMID:10449756 PMID:10572046 NCBI chr14:69,183,795...69,186,182
Ensembl chr14:69,183,820...69,186,061 		JBrowse link
G Nog noggin involved_in ISO (PMID:10080184) RGD PMID:10080184 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:1857831 (PMID:8631261) RGD PMID:8631261 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979 		JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO MGI:2155612 (PMID:11566859) RGD PMID:11566859 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594 		JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within ISO MGI:88174 (PMID:11290297) RGD PMID:11290297 NCBI chr10:82,682,563...82,694,563
Ensembl chr10:82,683,553...82,693,406 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO
IEA		 (PMID:18519639)
GO_REF:0000107
(MGI:3795695|PMID:18519639)		 RGD
Ensembl		 PMID:18519639 GO_REF:0000107 MGI:3795695 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) RGD PMID:15994349 MGI:3604178 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:72077|PMID:7743923) RGD PMID:7743923 MGI:72077 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95655 (PMID:17504941)		 Ensembl
RGD		 PMID:17504941 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Slc35d1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO MGI:3774133 (PMID:17952091) RGD PMID:17952091 NCBI chr 5:117,928,628...117,981,289
Ensembl chr 5:117,934,352...117,981,311 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Sulf1 sulfatase 1 involved_in IEA
ISO
ISS		 GO_REF:0000104
UniProtKB:Q8CFG0 (MGI:3771123|PMID:18213582)
GO_REF:0000024		 UniProt
RGD		 PMID:18213582 GO_REF:0000024 GO_REF:0000104 MGI:3771123 NCBI chr 5:6,362,894...6,526,174
Ensembl chr 5:6,362,911...6,525,584 		JBrowse link
G Sulf2 sulfatase 2 involved_in ISO UniProtKB:Q8CFG0 (MGI:3771123|PMID:18213582) RGD PMID:18213582 MGI:3771123 NCBI chr 3:154,822,079...154,904,566
Ensembl chr 3:154,822,085...154,904,415 		JBrowse link
G Tapt1 transmembrane anterior posterior transformation 1 acts_upstream_of_or_within ISO MGI:1857317 (PMID:17151244) RGD PMID:17151244 NCBI chr14:66,873,467...66,919,737
Ensembl chr14:66,873,459...66,919,741 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:1857760 (PMID:8293872) RGD PMID:8293872 NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
G Ucma upper zone of growth plate and cartilage matrix associated involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:73,293,977...73,303,709
Ensembl chr17:73,293,978...73,303,611 		JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO (PMID:9757009) RGD PMID:9757009 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA		 (PMID:19918918)
GO_REF:0000107		 RGD
Ensembl		 PMID:19918918 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Xylt1 xylosyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5544658|PMID:24161523)		 UniProt
RGD		 PMID:24161523 GO_REF:0000024 MGI:5544658 NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783 		JBrowse link
embryonic skeletal system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx1 ALX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000118
MGI:108359 (PMID:15728667), (PMID:9847249)
GO_REF:0000033		 TreeGrafter
RGD
GO_Central		 PMID:9847249 PMID:15728667 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220 		JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within ISO MGI:108359 (PMID:11641221), (PMID:15728667) RGD PMID:11641221 PMID:15728667 NCBI chr 2:195,231,197...195,241,609
Ensembl chr 2:195,231,197...195,241,609 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:104621|MGI:1277097|MGI:1856069 (PMID:11641221), (PMID:15728667), (PMID:9847249) RGD PMID:9847249 PMID:11641221 PMID:15728667 NCBI chr 3:79,611,682...79,648,260
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G Asxl2 ASXL transcriptional regulator 2 acts_upstream_of_or_within ISO MGI:3840841 (PMID:19270745) RGD PMID:19270745 NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:99161 (PMID:11290297) RGD PMID:11290297 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:2158495 (PMID:16712836) RGD PMID:16712836 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within ISO MGI:3768254 (PMID:16079159) RGD PMID:16079159 NCBI chr 7:20,524,535...20,743,008
Ensembl chr 7:20,528,100...20,743,111 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (PMID:4100752) RGD PMID:4100752 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2680670 (PMID:11238884)		 Ensembl
RGD		 PMID:11238884 GO_REF:0000107 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689 		JBrowse link
G Dscaml1 DS cell adhesion molecule-like 1 involved_in ISO (PMID:12051741) RGD PMID:12051741 NCBI chr 8:45,740,298...46,057,322
Ensembl chr 8:45,740,298...46,057,320 		JBrowse link
G Dync2i1 dynein 2 intermediate chain 1 involved_in ISO (PMID:23910462) RGD PMID:23910462 NCBI chr 6:137,133,418...137,189,937
Ensembl chr 6:137,133,418...137,188,719 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:2150426 (PMID:10471511) RGD PMID:10471511 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 acts_upstream_of_or_within ISO MGI:5474636 (PMID:23187127) RGD PMID:23187127 NCBI chr13:102,586,263...102,608,647
Ensembl chr13:102,586,257...102,608,661 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (PMID:9409679) RGD PMID:9409679 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Fuz fuzzy planar cell polarity protein involved_in ISS
ISO		 GO_REF:0000024
(MGI:4438317|PMID:19767740), (MGI:5296432|PMID:21935430), (MGI:5498583|PMID:23806618)		 UniProt
RGD		 PMID:19767740 PMID:21935430 PMID:23806618 GO_REF:0000024 MGI:4438317 MGI:5296432 MGI:5498583 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1277234 (PMID:15728667) RGD PMID:15728667 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within ISO MGI:1857496|MGI:1857726 (PMID:7555718), (PMID:7555726) RGD PMID:7555718 PMID:7555726 NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within ISO MGI:102778 (PMID:15634706) RGD PMID:15634706 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
G Hoxa3 homeobox A3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:96184|MGI:96207 (PMID:9441667)		 GO_Central
RGD		 PMID:9441667 GO_REF:0000033 NCBI chr 4:81,269,243...81,313,218
Ensembl chr 4:81,269,243...81,313,218 		JBrowse link
G Hoxa4 homeo box A4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000118
MGI:2150391|MGI:96185|MGI:96208 (PMID:7628700), (PMID:7918106)		 TreeGrafter
RGD		 PMID:7628700 PMID:7918106 GO_REF:0000118 NCBI chr 4:81,289,677...81,291,685
Ensembl chr 4:81,289,682...81,291,685 		JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397|MGI:3723623 (PMID:17417799), (PMID:7901120), (PMID:9603431) RGD PMID:7901120 PMID:9603431 PMID:17417799 NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234 		JBrowse link
G Hoxa7 homeobox A7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:96188 (PMID:9784603)		 Ensembl
RGD		 PMID:9784603 GO_REF:0000107 NCBI chr 4:81,315,730...81,317,629
Ensembl chr 4:81,314,625...81,317,659 		JBrowse link
G Hoxa9 homeobox A9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:81,323,235...81,329,344
Ensembl chr 4:81,323,382...81,326,358 		JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747) RGD PMID:10885747 NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836 		JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:96182|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747) RGD PMID:10885747 NCBI chr10:81,317,828...81,320,220
Ensembl chr10:81,318,026...81,320,192 		JBrowse link
G Hoxb3 homeo box B3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2151773|MGI:96175|MGI:96182|MGI:96183|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96207 (PMID:10885747), (PMID:9441667)		 GO_Central
RGD		 PMID:9441667 PMID:10885747 GO_REF:0000033 NCBI chr10:81,258,739...81,314,134
Ensembl chr10:81,299,357...81,313,107 		JBrowse link
G Hoxb4 homeo box B4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:96176|MGI:96183|MGI:96184|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747), (PMID:7628700)		 GO_Central
RGD		 PMID:7628700 PMID:10885747 GO_REF:0000033 NCBI chr10:81,284,552...81,287,134
Ensembl chr10:81,284,552...81,287,128 		JBrowse link
G Hoxb5 homeo box B5 acts_upstream_of_or_within ISO MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747), (PMID:7828847) RGD PMID:7828847 PMID:10885747 NCBI chr10:81,269,372...81,271,580
Ensembl chr10:81,269,372...81,271,580 		JBrowse link
G Hoxb6 homeo box B6 acts_upstream_of_or_within ISO MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96188|MGI:96189|MGI:96190 (PMID:10885747) RGD PMID:10885747 NCBI chr10:81,258,726...81,267,458
Ensembl chr10:81,265,056...81,267,449 		JBrowse link
G Hoxb7 homeo box B7 acts_upstream_of_or_within ISO MGI:2150401|MGI:96179|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96189|MGI:96190 (PMID:10885747), (PMID:9784603) RGD PMID:9784603 PMID:10885747 NCBI chr10:81,252,616...81,256,034
Ensembl chr10:81,252,553...81,256,034 		JBrowse link
G Hoxb8 homeo box B8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1934178|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96190 (PMID:10559485), (PMID:10885747)		 Ensembl
RGD		 PMID:10559485 PMID:10885747 GO_REF:0000107 NCBI chr10:81,248,313...81,251,261
Ensembl chr10:81,248,887...81,250,638 		JBrowse link
G Hoxb9 homeo box B9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:81,237,312...81,240,818
Ensembl chr10:81,237,312...81,240,818 		JBrowse link
G Hoxc4 homeo box C4 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 7:134,135,279...134,173,133
Ensembl chr 7:134,170,591...134,173,133 		JBrowse link
G Hoxc9 homeobox C9 acts_upstream_of_or_within ISO MGI:2150685 (PMID:7547473) RGD PMID:7547473 NCBI chr 7:134,118,817...134,121,497
Ensembl chr 7:134,118,817...134,121,492 		JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO MGI:96210 (PMID:10642795) RGD PMID:10642795 NCBI chr 3:59,594,516...59,597,725
Ensembl chr 3:59,594,516...59,597,725 		JBrowse link
G Hoxd3 homeo box D3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857959|MGI:96175 (PMID:7910549), (PMID:7913519)		 Ensembl
RGD		 PMID:7910549 PMID:7913519 GO_REF:0000107 NCBI chr 3:59,638,708...59,650,282
Ensembl chr 3:59,638,708...59,650,282 		JBrowse link
G Hoxd4 homeo box D4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2151488|MGI:96176 (PMID:7628700), (PMID:7750651)		 GO_Central
RGD		 PMID:7628700 PMID:7750651 GO_REF:0000033 NCBI chr 3:59,614,464...59,634,042
Ensembl chr 3:59,614,464...59,631,528 		JBrowse link
G Hoxd9 homeo box D9 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:96202 (PMID:10642795)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:10642795 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:59,600,575...59,602,755
Ensembl chr 3:59,600,575...59,602,754 		JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934892 (PMID:10579729) RGD PMID:10579729 NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594 		JBrowse link
G Mdfi MyoD family inhibitor acts_upstream_of_or_within ISO MGI:2155446 (PMID:9799236) RGD PMID:9799236 NCBI chr 9:13,156,806...13,175,218
Ensembl chr 9:13,156,866...13,175,217 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:3603182 (PMID:17420000) RGD PMID:17420000 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5551355|PMID:24052814)
GO_REF:0000107		 CAFA
RGD
Ensembl		 PMID:24052814 GO_REF:0000024 GO_REF:0000107 MGI:5551355 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Men1 menin 1 acts_upstream_of_or_within ISO MGI:2683274|MGI:3573783 (PMID:17927973) RGD PMID:17927973 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:17360777)		 Ensembl
RGD		 PMID:17360777 GO_REF:0000107 NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857219 (PMID:10929709) RGD PMID:10929709 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:3033240 (PMID:15175245)		 UniProt
RGD		 PMID:15175245 GO_REF:0000024 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within ISO MGI:88174 (PMID:11290297) RGD PMID:11290297 NCBI chr10:82,682,563...82,694,563
Ensembl chr10:82,683,553...82,693,406 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:1857640|MGI:98218 (PMID:11532916), (PMID:7758948), (PMID:9729491), (PMID:9876178) RGD PMID:7758948 PMID:9729491 PMID:9876178 PMID:11532916 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (PMID:11532916), (PMID:9729491), (PMID:9876178) RGD PMID:9729491 PMID:9876178 PMID:11532916 NCBI chr 3:14,132,574...14,168,533
Ensembl chr 3:14,094,004...14,168,535 		JBrowse link
G Satb2 SATB homeobox 2 acts_upstream_of_or_within ISO MGI:3692768|MGI:3695425 (PMID:16751105), (PMID:16960803) RGD PMID:16751105 PMID:16960803 NCBI chr 9:58,348,027...58,534,256
Ensembl chr 9:58,350,246...58,530,707 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:106034 (PMID:15788460) RGD PMID:15788460 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six2 SIX homeobox 2 acts_upstream_of_or_within ISO MGI:96174 (PMID:15634706) RGD PMID:15634706 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (PMID:15788460) RGD PMID:15788460 NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3052265|PMID:15254231)		 UniProt
RGD		 PMID:15254231 GO_REF:0000024 MGI:3052265 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
G Tbx15 T-box transcription factor 15 acts_upstream_of_or_within ISO MGI:1856015|MGI:95729 (PMID:15728667) RGD PMID:15728667 NCBI chr 2:186,576,650...186,687,748
Ensembl chr 2:186,576,676...186,687,663 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:3038818 (PMID:15030764) RGD PMID:15030764 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of_or_within ISO MGI:3701350 (PMID:16818445) RGD PMID:16818445 NCBI chr10:44,094,140...44,121,134
Ensembl chr10:44,094,140...44,121,133 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857799 (PMID:9389660)		 Ensembl
RGD		 PMID:9389660 GO_REF:0000107 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
embryonic viscerocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3768254 (PMID:16079159)		 Ensembl
RGD		 PMID:16079159 GO_REF:0000107 NCBI chr 7:20,524,535...20,743,008
Ensembl chr 7:20,528,100...20,743,111 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (PMID:9409679) RGD PMID:9409679 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2385711 (PMID:16221728)		 Ensembl
RGD		 PMID:16221728 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3777712|PMID:14695376)		 UniProt
RGD		 PMID:14695376 GO_REF:0000024 MGI:3777712 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:3603182 (PMID:17420000) RGD PMID:17420000 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO (MGI:5468075|PMID:23267094) RGD PMID:23267094 MGI:5468075 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905 		JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:3589383 (PMID:16020517) RGD PMID:16020517 NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4332250 (PMID:19763162)		 GO_Central
RGD		 PMID:19763162 GO_REF:0000033 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) RGD PMID:17473173 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:14585638)		 UniProt
RGD		 PMID:14585638 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
endoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:1858007|MGI:2148567|MGI:4418897 (PMID:12194849), (PMID:23824574) RGD PMID:12194849 PMID:23824574 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Dusp1 dual specificity phosphatase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:16,680,478...16,683,275 JBrowse link
G Dusp2 dual specificity phosphatase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:114,556,325...114,558,510
Ensembl chr 3:114,556,325...114,558,499 		JBrowse link
G Dusp4 dual specificity phosphatase 4 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:57,376,659...57,398,161
Ensembl chr16:57,377,229...57,398,138 		JBrowse link
G Dusp5 dual specificity phosphatase 5 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:252,538,408...252,555,320
Ensembl chr 1:252,538,449...252,551,818 		JBrowse link
G ENSRNOG00000069024 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr10:16,681,808...16,683,120 JBrowse link
G Eomes eomesodermin involved_in
acts_upstream_of_or_within		 ISO (MGI:3772748|PMID:18171685)
MGI:3774028 (PMID:21245162), (PMID:21822279)		 RGD PMID:18171685 PMID:21245162 PMID:21822279 MGI:3772748 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2179511 (PMID:8582296) RGD PMID:8582296 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857848 (PMID:15355796)		 UniProt
RGD		 PMID:15355796 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Mixl1 Mix paired-like homeobox 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2387829 (PMID:17151016)		 GO_Central
RGD		 PMID:17151016 GO_REF:0000033 NCBI chr13:92,422,031...92,426,065
Ensembl chr13:92,422,031...92,426,065 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18462699)		 Ensembl
RGD		 PMID:18462699 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO (PMID:21822279) RGD PMID:21822279 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in ISO
IBA		 (PMID:18682240)
GO_REF:0000033		 RGD
GO_Central		 PMID:18682240 GO_REF:0000033 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Sox7 SRY-box transcription factor 7 involved_in ISO (PMID:18682240) RGD PMID:18682240 NCBI chr15:38,180,503...38,187,264
Ensembl chr15:38,180,503...38,187,264 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C acts_upstream_of_or_within ISO MGI:4124681 (PMID:22187428) RGD PMID:22187428 NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194 		JBrowse link
endodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd3 bromodomain containing 3 involved_in ISO (PMID:32895492)
(MGI:6709624|PMID:32895492)		 RGD PMID:32895492 MGI:6709624 NCBI chr 3:10,773,163...10,829,675
Ensembl chr 3:10,775,272...10,829,577 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col12a1 collagen type XII alpha 1 chain involved_in ISO
IEA		 (PMID:23154389)
GO_REF:0000107		 RGD
Ensembl		 PMID:23154389 GO_REF:0000107 NCBI chr 8:80,547,592...80,665,665
Ensembl chr 8:80,547,593...80,665,686 		JBrowse link
G Col4a2 collagen type IV alpha 2 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Col7a1 collagen type VII alpha 1 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 8:109,604,877...109,637,249
Ensembl chr 8:109,604,861...109,637,252 		JBrowse link
G Col8a1 collagen type VIII alpha 1 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424 		JBrowse link
G Fn1 fibronectin 1 involved_in ISO
IEA		 (PMID:23154389)
GO_REF:0000107		 RGD
Ensembl		 PMID:23154389 GO_REF:0000107 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678 		JBrowse link
G Gata6 GATA binding protein 6 acts_upstream_of_or_within ISO MGI:2177785 (PMID:9832509) RGD PMID:9832509 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16908534)		 Ensembl
RGD		 PMID:16908534 GO_REF:0000107 NCBI chr10:100,881,404...100,949,193
Ensembl chr10:100,869,718...100,949,309 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS		 (PMID:17624332)
GO_REF:0000024		 RGD
UniProt		 PMID:17624332 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Hsbp1 heat shock factor binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:24380799)		 Ensembl
RGD		 PMID:24380799 GO_REF:0000107 NCBI chr19:47,401,039...47,405,373
Ensembl chr19:47,400,966...47,435,821 		JBrowse link
G Inhba inhibin subunit beta A involved_in ISO (PMID:21828274) RGD PMID:21828274 NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982 		JBrowse link
G Itga4 integrin subunit alpha 4 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715 		JBrowse link
G Itga5 integrin subunit alpha 5 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 7:134,478,963...134,502,837
Ensembl chr 7:134,478,968...134,502,837 		JBrowse link
G Itga7 integrin subunit alpha 7 involved_in ISO
IEA		 (PMID:23154389)
GO_REF:0000107		 RGD
Ensembl		 PMID:23154389 GO_REF:0000107 NCBI chr 7:1,360,125...1,388,886
Ensembl chr 7:1,359,940...1,388,450 		JBrowse link
G Itgav integrin subunit alpha V involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 3:68,838,514...68,926,653
Ensembl chr 3:68,838,189...68,926,639 		JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr20:11,061,394...11,097,656
Ensembl chr20:11,061,430...11,097,600 		JBrowse link
G Itgb5 integrin subunit beta 5 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr11:66,828,428...66,944,231
Ensembl chr11:66,829,285...66,944,472 		JBrowse link
G Lama3 laminin subunit alpha 3 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353 		JBrowse link
G Lamb1 laminin subunit beta 1 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
G Lamb3 laminin subunit beta 3 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr13:104,833,810...104,875,405
Ensembl chr13:104,833,873...104,875,405 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:16908534)		 Ensembl
RGD		 PMID:16908534 GO_REF:0000107 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Mixl1 Mix paired-like homeobox 1 involved_in ISO (MGI:5447921|PMID:19038793) RGD PMID:19038793 MGI:5447921 NCBI chr13:92,422,031...92,426,065
Ensembl chr13:92,422,031...92,426,065 		JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864 		JBrowse link
G Mmp15 matrix metallopeptidase 15 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr19:9,663,449...9,684,943
Ensembl chr19:9,663,449...9,684,943 		JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in ISO
IEA		 (PMID:23154389)
GO_REF:0000107		 RGD
Ensembl		 PMID:23154389 GO_REF:0000107 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870 		JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IEA
ISO		 GO_REF:0000107
(PMID:23154389)		 Ensembl
RGD		 PMID:23154389 GO_REF:0000107 NCBI chr 8:4,724,009...4,733,864
Ensembl chr 8:4,724,029...4,733,520 		JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in IEA
ISO		 GO_REF:0000107
(PMID:23154389)		 Ensembl
RGD		 PMID:23154389 GO_REF:0000107 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120 		JBrowse link
G Myh9 myosin, heavy chain 9 involved_in IEA
ISO		 GO_REF:0000107
MGI:3522434 (PMID:15292239)		 Ensembl
RGD		 PMID:15292239 GO_REF:0000107 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457 		JBrowse link
G Nodal nodal growth differentiation factor involved_in ISO (PMID:21741376) RGD PMID:21741376 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16466956)		 Ensembl
RGD		 PMID:16466956 GO_REF:0000107 NCBI chr  X:50,756,886...50,761,014
Ensembl chr  X:50,756,886...50,761,011 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (MGI:5908786|PMID:25242323) RGD PMID:25242323 MGI:5908786 NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of ISO (PMID:17940068) RGD PMID:17940068 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Vtn vitronectin involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810 		JBrowse link
endodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc73 cell division cycle 73 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:3849235|PMID:19345177)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:19345177 GO_REF:0000024 GO_REF:0000107 MGI:3849235 NCBI chr13:55,357,226...55,449,690
Ensembl chr13:55,357,226...55,449,656 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858007|MGI:2148567 (PMID:12194849)		 Ensembl
RGD		 PMID:12194849 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (MGI:3849235|PMID:19345177) RGD PMID:19345177 MGI:3849235 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in ISS
ISO		 GO_REF:0000024
(MGI:3849235|PMID:19345177)		 UniProt
RGD		 PMID:19345177 GO_REF:0000024 MGI:3849235 NCBI chr 8:76,199,547...76,223,983
Ensembl chr 8:76,199,099...76,223,983 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISS
ISO		 GO_REF:0000024
(MGI:3849235|PMID:19345177)		 UniProt
RGD		 PMID:19345177 GO_REF:0000024 MGI:3849235 NCBI chr 1:83,683,654...83,689,233
Ensembl chr 1:83,668,813...83,689,237 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:10742100) RGD PMID:10742100 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) involved_in ISO (MGI:3849235|PMID:19345177) RGD PMID:19345177 MGI:3849235 NCBI chr 3:106,659,363...106,718,956
Ensembl chr 3:106,659,308...106,718,970 		JBrowse link
endodermal cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20308546)		 Ensembl
RGD		 PMID:20308546 GO_REF:0000107 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO (PMID:20308546) RGD PMID:20308546 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3774028 (PMID:21245162)		 GO_Central
RGD		 PMID:21245162 GO_REF:0000033 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857856 (PMID:18635606)		 Ensembl
RGD		 PMID:18635606 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Nanog Nanog homeobox acts_upstream_of_or_within ISO (PMID:20713518) RGD PMID:20713518 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:20713518) RGD PMID:20713518 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in ISO (MGI:4946573|PMID:21305474) RGD PMID:21305474 MGI:4946573 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:21245162) RGD PMID:21245162 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
epiboly involved in gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Megf8 multiple EGF-like-domains 8 involved_in IEA
ISO		 GO_REF:0000107
(PMID:23063620)		 Ensembl
RGD		 PMID:23063620 GO_REF:0000107 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4340678 (PMID:25758223) RGD PMID:25758223 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:1338881|MGI:2156187 (PMID:19592578) RGD PMID:19592578 NCBI chr 1:84,558,159...84,580,616
Ensembl chr 1:84,558,166...84,580,616 		JBrowse link
G St14 ST14 transmembrane serine protease matriptase acts_upstream_of_or_within ISO MGI:1338031 (PMID:19592578) RGD PMID:19592578 NCBI chr 8:29,540,805...29,581,704
Ensembl chr 8:29,540,811...29,581,517 		JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1915838 (PMID:18606138)		 Ensembl
RGD		 PMID:18606138 GO_REF:0000107 NCBI chr 7:70,122,474...70,132,756
Ensembl chr 7:70,122,474...70,132,756 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1857642 (PMID:18606138) RGD PMID:18606138 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
establishment or maintenance of polarity of embryonic epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Llgl2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO MGI:4331862 (PMID:21606200) RGD PMID:21606200 NCBI chr10:101,050,978...101,086,527
Ensembl chr10:101,051,408...101,086,525 		JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:97,548,133...97,654,163
Ensembl chr 6:97,548,630...97,653,305 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (PMID:19060336) RGD PMID:19060336 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
fetal process involved in parturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tk1 thymidine kinase 1 IEP RGD PMID:7208144 RGD:2317233 NCBI chr10:103,034,755...103,046,125
Ensembl chr10:103,031,521...103,046,920 		JBrowse link
floor plate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cby1 chibby 1, beta catenin antagonist acts_upstream_of_or_within ISO MGI:1919757 (PMID:29487109) RGD PMID:29487109 NCBI chr 7:111,216,835...111,223,305 JBrowse link
G Cobl cordon-bleu WH2 repeat protein involved_in ISO
IEA		 (MGI:76306|PMID:7586755)
GO_REF:0000107		 RGD
Ensembl		 PMID:7586755 GO_REF:0000107 MGI:76306 NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800 		JBrowse link
G Dzip1l DAZ interacting zinc finger protein 1-like involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1920989 (PMID:29487109)		 Ensembl
RGD		 PMID:29487109 GO_REF:0000107 NCBI chr 8:100,188,414...100,229,077
Ensembl chr 8:100,194,999...100,228,988 		JBrowse link
G Ferd3l Fer3-like bHLH transcription factor acts_upstream_of_or_within ISO MGI:4460989 (PMID:20460368) RGD PMID:20460368 NCBI chr 6:50,645,379...50,646,268
Ensembl chr 6:50,645,379...50,646,268 		JBrowse link
G Foxb1 forkhead box B1 involved_in ISO (MGI:3771770|PMID:18064677) RGD PMID:18064677 MGI:3771770 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781 		JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (PMID:10385121) RGD PMID:10385121 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
floor plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk20 cyclin-dependent kinase 20 acts_upstream_of_or_within ISO MGI:6113512 (PMID:28817564) RGD PMID:28817564 NCBI chr17:701,122...707,869
Ensembl chr17:701,124...707,826 		JBrowse link
G Cluap1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4363468 (PMID:23351563)		 Ensembl
RGD		 PMID:23351563 GO_REF:0000107 NCBI chr10:11,587,963...11,619,711
Ensembl chr10:11,588,017...11,619,711 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (PMID:9636069), (PMID:9655799) RGD PMID:9636069 PMID:9655799 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
floor plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163) RGD PMID:11311163 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
forebrain-midbrain boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856155|MGI:1856158 (PMID:9169845)		 Ensembl
RGD		 PMID:9169845 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
formation of primary germ layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO MGI:3796520 (PMID:18448678) RGD PMID:18448678 NCBI chr 5:145,908,173...145,981,552
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
G Atoh8 atonal bHLH transcription factor 8 involved_in ISO (MGI:3798332|PMID:18560595) RGD PMID:18560595 MGI:3798332 NCBI chr 4:104,259,992...104,292,168
Ensembl chr 4:104,259,992...104,292,168 		JBrowse link
G Kif16b kinesin family member 16B involved_in ISO (MGI:4889011|PMID:21238925) RGD PMID:21238925 MGI:4889011 NCBI chr 3:129,974,692...130,254,194
Ensembl chr 3:129,974,800...130,254,019 		JBrowse link
gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO MGI:1857711 (PMID:10226013) RGD PMID:10226013 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Apln apelin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:127,180,801...127,213,567
Ensembl chr  X:127,203,823...127,213,391 		JBrowse link
G Aplnr apelin receptor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050 		JBrowse link
G Arfrp1 ADP-ribosylation factor related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2159671 (PMID:11839814)		 Ensembl
RGD		 PMID:11839814 GO_REF:0000107 NCBI chr 3:168,466,351...168,473,960
Ensembl chr 3:168,466,496...168,473,914 		JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO MGI:3796520 (PMID:18448678) RGD PMID:18448678 NCBI chr 5:145,908,173...145,981,552
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within ISO MGI:6157645 (PMID:28911199) RGD PMID:28911199 NCBI chr 1:182,820,141...182,826,913
Ensembl chr 1:182,820,141...182,826,907 		JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO MGI:98658 (PMID:18241853) RGD PMID:18241853 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783 		JBrowse link
G Cripto cripto, EGF-CFC family member acts_upstream_of_or_within ISO MGI:1201414 (PMID:18241853) RGD PMID:18241853 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308 		JBrowse link
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2651546 (PMID:10500095)		 Ensembl
RGD		 PMID:10500095 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Dld dihydrolipoamide dehydrogenase acts_upstream_of_or_within ISO MGI:2182403 (PMID:9405644) RGD PMID:9405644 NCBI chr 6:47,904,153...47,924,814
Ensembl chr 6:47,903,914...47,924,795 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect		 ISO MGI:1888710 (PMID:10926768), (PMID:20080592) RGD PMID:10926768 PMID:20080592 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Hira histone cell cycle regulator acts_upstream_of_or_within ISO MGI:2178130 (PMID:11884616) RGD PMID:11884616 NCBI chr11:82,024,469...82,133,212
Ensembl chr11:82,024,469...82,133,529 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:1857180|MGI:1857722|MGI:2177743 (PMID:7550343), (PMID:7618107), (PMID:7774020) RGD PMID:7550343 PMID:7618107 PMID:7774020 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Lmbrd1 LMBR1 domain containing 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000043
(MGI:6508510|PMID:27061115)		 UniProt
RGD		 PMID:27061115 GO_REF:0000024 GO_REF:0000043 MGI:6508510 NCBI chr 9:27,096,387...27,178,095
Ensembl chr 9:27,096,297...27,178,090 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (MGI:83220|PMID:8787751) RGD PMID:8787751 MGI:83220 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
G Mixl1 Mix paired-like homeobox 1 acts_upstream_of_or_within ISO MGI:2387828 (PMID:12117810) RGD PMID:12117810 NCBI chr13:92,422,031...92,426,065
Ensembl chr13:92,422,031...92,426,065 		JBrowse link
G Nat8f2 N-acetyltransferase 8 (GCN5-related) family member 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:118,319,984...118,323,159
Ensembl chr 4:118,319,988...118,324,395 		JBrowse link
G Nat8f4 N-acetyltransferase 8 (GCN5-related) family member 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:118,326,092...118,332,591
Ensembl chr 4:118,325,874...118,332,658 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163), (PMID:14511481) RGD PMID:11311163 PMID:14511481 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3042044|PMID:13129926)		 UniProt
RGD		 PMID:13129926 GO_REF:0000024 MGI:3042044 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733 		JBrowse link
G Poglut1 protein O-glucosyltransferase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:62,198,600...62,226,446
Ensembl chr11:62,198,513...62,226,434 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:33,169,415...33,174,896
Ensembl chr10:33,169,169...33,174,975 		JBrowse link
G Rbm14 RNA binding motif protein 14 acts_upstream_of_or_within ISO MGI:6455488 (PMID:31794640) RGD PMID:31794640 NCBI chr 1:202,076,940...202,105,688
Ensembl chr 1:202,078,287...202,105,665 		JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A acts_upstream_of_or_within ISO MGI:3608888 (PMID:21069829) RGD PMID:21069829 NCBI chr 1:195,935,162...195,941,469
Ensembl chr 1:195,935,349...195,941,467 		JBrowse link
G Rps6 ribosomal protein S6 acts_upstream_of_or_within ISO MGI:2387471|MGI:98834 (PMID:17000767) RGD PMID:17000767 NCBI chr 5:101,371,716...101,374,576
Ensembl chr 5:101,371,136...101,374,602
Ensembl chr 5:101,371,136...101,374,602 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO MGI:1201674 (PMID:15183723) RGD PMID:15183723 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (PMID:15183723) RGD PMID:15183723 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within ISO MGI:1858049 (PMID:9420335) RGD PMID:9420335 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:3717118 (PMID:20123909) RGD PMID:20123909 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2158696 (PMID:9799237) RGD PMID:9799237 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Supt20h SPT20 homolog, SAGA complex component involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:138,897,316...138,930,493
Ensembl chr 2:138,897,416...138,930,495 		JBrowse link
G Syf2 SYF2 pre-mRNA-splicing factor acts_upstream_of_or_within ISO MGI:3904866 (PMID:22448250) RGD PMID:22448250 NCBI chr 5:147,156,492...147,164,416
Ensembl chr 5:147,156,480...147,164,414 		JBrowse link
G Tcf3 transcription factor 3 involved_in ISO UniProtKB:A4IIL6 (MGI:5574293|PMID:21828274) RGD PMID:21828274 MGI:5574293 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:10030593)		 Ensembl
RGD		 PMID:10030593 GO_REF:0000107 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:98159 (PMID:17000767)		 Ensembl
RGD		 PMID:17000767 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Txnrd1 thioredoxin reductase 1 acts_upstream_of_or_within ISO MGI:3722092 (PMID:17697936) RGD PMID:17697936 NCBI chr 7:20,830,042...20,914,990
Ensembl chr 7:20,830,045...20,907,863 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:2180720 (PMID:16397896) RGD PMID:16397896 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO MGI:1931734|MGI:3696672 (PMID:17117439) RGD PMID:17117439 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Acvr2a activin A receptor type 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:87912 (PMID:10452853)		 Ensembl
RGD		 PMID:10452853 GO_REF:0000107 NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968 		JBrowse link
G Acvr2b activin A receptor type 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:102806 (PMID:10452853)		 Ensembl
RGD		 PMID:10452853 GO_REF:0000107 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458 		JBrowse link
G Amot angiomotin acts_upstream_of_or_within ISO MGI:2656627 (PMID:12676095) RGD PMID:12676095 NCBI chr  X:108,982,399...109,041,265
Ensembl chr  X:108,984,022...109,041,272 		JBrowse link
G Chrd chordin acts_upstream_of_or_within ISO MGI:2157350 (PMID:12810603) RGD PMID:12810603 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857678 (PMID:8582267)		 Ensembl
RGD		 PMID:8582267 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dact1 dishevelled-binding antagonist of beta-catenin 1 acts_upstream_of_or_within ISO MGI:4360072 (PMID:19701191) RGD PMID:19701191 NCBI chr 6:89,790,676...89,818,254
Ensembl chr 6:89,790,644...89,817,906 		JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within ISO MGI:3580390 (PMID:15870281) RGD PMID:15870281 NCBI chr 7:52,711,255...52,792,738
Ensembl chr 7:52,711,257...52,792,743 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2179443 (PMID:9136933) RGD PMID:9136933 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:2449177 (PMID:12490556) RGD PMID:12490556 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857848 (PMID:15355796)		 UniProt
RGD		 PMID:15355796 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1298218 (PMID:15142971)		 GO_Central
RGD		 PMID:15142971 GO_REF:0000033 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1278315 (PMID:15142971) RGD PMID:15142971 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Nat8 N-acetyltransferase 8 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2135831|PMID:11397015)		 UniProt
RGD		 PMID:11397015 GO_REF:0000024 MGI:2135831 NCBI chr 4:118,279,521...118,284,671
Ensembl chr 4:118,270,954...118,281,763 		JBrowse link
G Nat8b N-acetyltransferase 8B involved_in NAS PMID:11397015 UniProt PMID:11397015 RGD:632468 NCBI chr 4:118,359,445...118,364,351
Ensembl chr 4:118,359,443...118,363,563 		JBrowse link
G Nat8f1 N-acetyltransferase 8 (GCN5-related) family member 1 involved_in NAS PMID:11397015 UniProt PMID:11397015 RGD:632468 NCBI chr 4:118,336,208...118,342,923
Ensembl chr 4:118,332,862...118,344,035 		JBrowse link
G Nat8f3 N-acetyltransferase 8 (GCN5-related) family member 3 involved_in NAS PMID:11397015 UniProt PMID:11397015 RGD:632468 NCBI chr 4:118,241,792...118,246,010
Ensembl chr 4:118,239,304...118,285,500 		JBrowse link
G Nat8f5 N-acetyltransferase 8 (GCN5-related) family member 5 involved_in NAS PMID:11397015 UniProt PMID:11397015 RGD:632468 NCBI chr 4:118,260,323...118,285,038
Ensembl chr 4:118,260,252...118,285,704 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:1856970 (PMID:14607953) RGD PMID:14607953 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 acts_upstream_of_or_within ISO MGI:2667262 (PMID:12805229) RGD PMID:12805229 NCBI chr17:9,311,963...9,426,373
Ensembl chr17:9,315,237...9,425,358 		JBrowse link
G Plpp3 phospholipid phosphatase 3 acts_upstream_of_or_within ISO MGI:2674217 (PMID:12925589) RGD PMID:12925589 NCBI chr 5:119,927,085...120,002,206
Ensembl chr 5:119,927,085...120,002,205 		JBrowse link
G Rnf2 ring finger protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2653961 (PMID:12589020)		 Ensembl
RGD		 PMID:12589020 GO_REF:0000107 NCBI chr13:63,553,964...63,584,047
Ensembl chr13:63,554,862...63,583,099 		JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857691|MGI:2656539|MGI:2668393 (PMID:15215210)		 Ensembl
RGD		 PMID:15215210 GO_REF:0000107 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Tenm4 teneurin transmembrane protein 4 acts_upstream_of_or_within ISO MGI:2449635 (PMID:15489520) RGD PMID:15489520 NCBI chr 1:149,895,097...151,263,315
Ensembl chr 1:150,780,381...151,259,144 		JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:2678264 (PMID:15755804)
(MGI:2675908|PMID:14505572)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:14505572 PMID:15755804 GO_REF:0000024 GO_REF:0000107 MGI:2675908 NCBI chr14:42,848,704...42,872,351
Ensembl chr14:42,848,854...42,872,354 		JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 acts_upstream_of_or_within ISO MGI:2679766 (PMID:14560010) RGD PMID:14560010 NCBI chr 5:153,753,508...153,774,613
Ensembl chr 5:153,753,569...153,774,609 		JBrowse link
glycogen cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2675202 (PMID:12783884)		 Ensembl
RGD		 PMID:12783884 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Ahi1 Abelson helper integration site 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041 		JBrowse link
G Aplnr apelin receptor involved_in ISO (MGI:5584055|PMID:23603510) RGD PMID:23603510 MGI:5584055 NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050 		JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B acts_upstream_of_or_within ISO MGI:3578151 (PMID:22554696) RGD PMID:22554696 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197 		JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 involved_in ISO (MGI:6717247|PMID:32179481) RGD PMID:32179481 MGI:6717247 NCBI chr 6:122,474,754...122,511,014
Ensembl chr 6:122,474,756...122,510,854 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520 		JBrowse link
G Ccdc103 coiled-coil domain containing 103 involved_in ISO (PMID:22581229) RGD PMID:22581229 NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757 		JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO
IBA		 (PMID:22693285)
GO_REF:0000033		 RGD
GO_Central		 PMID:22693285 GO_REF:0000033 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243 		JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO MGI:2179530 (PMID:10521397) RGD PMID:10521397 NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (PMID:15750185) RGD PMID:15750185 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Cluap1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5523142 (PMID:23742838)		 Ensembl
RGD		 PMID:23742838 GO_REF:0000107 NCBI chr10:11,587,963...11,619,711
Ensembl chr10:11,588,017...11,619,711 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO
IEA		 (MGI:2661305|PMID:12730124)
GO_REF:0000107		 RGD
Ensembl		 PMID:12730124 GO_REF:0000107 MGI:2661305 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA		 (PMID:19944400), (PMID:19944405)
GO_REF:0000107		 RGD
Ensembl		 PMID:19944400 PMID:19944405 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO UniProtKB:Q60838 (MGI:5439040|PMID:22841628) RGD PMID:22841628 MGI:5439040 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in ISO UniProtKB:P51141 (MGI:5439040|PMID:22841628) RGD PMID:22841628 MGI:5439040 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820 		JBrowse link
G Eng endoglin involved_in ISO (MGI:1337912|PMID:10348742), (MGI:4368063|PMID:19703439) RGD PMID:10348742 PMID:19703439 MGI:1337912 MGI:4368063 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843 (PMID:10411502) RGD PMID:10411502 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Folr1 folate receptor alpha involved_in ISO (MGI:3721767|PMID:17286298) RGD PMID:17286298 MGI:3721767 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667 		JBrowse link
G Foxh1 forkhead box H1 involved_in ISO (MGI:3055632|PMID:15363409) RGD PMID:15363409 MGI:3055632 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049 		JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO (MGI:3052615|PMID:15310850) RGD PMID:15310850 MGI:3052615 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:1857177 (PMID:9486664) RGD PMID:9486664 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO MGI:2153823 (PMID:9500551) RGD PMID:9500551 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857639 (PMID:9171826)		 Ensembl
RGD		 PMID:9171826 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2179429 (PMID:14659802)		 Ensembl
RGD		 PMID:14659802 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3829198 (PMID:18930042)		 Ensembl
RGD		 PMID:18930042 GO_REF:0000107 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (PMID:15930098) RGD PMID:15930098 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within ISO MGI:3707373 (PMID:17027958) RGD PMID:17027958 NCBI chr11:51,051,520...51,124,909
Ensembl chr11:51,059,611...51,124,812 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (MGI:5142377|PMID:11517919) RGD PMID:11517919 MGI:5142377 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) RGD PMID:25463925 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:2181727 (PMID:10330409) RGD PMID:10330409 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Lbx1 ladybird homeobox 1 acts_upstream_of_or_within ISO MGI:2386948 (PMID:12522123) RGD PMID:12522123 NCBI chr 1:244,083,873...244,085,690
Ensembl chr 1:244,083,873...244,085,690 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (PMID:19795512) RGD PMID:19795512 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO		 GO_REF:0000024
(MGI:3830899|PMID:16680724)		 UniProt
RGD		 PMID:16680724 GO_REF:0000024 MGI:3830899 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (MGI:1339460|PMID:10393122) RGD PMID:10393122 MGI:1339460 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3603514 (PMID:16000382) RGD PMID:16000382 NCBI chr18:1,802,519...1,926,988
Ensembl chr18:1,802,519...1,920,689 		JBrowse link
G Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:166,345,853...166,530,575
Ensembl chr 1:166,345,859...166,471,719
Ensembl chr 1:166,345,859...166,471,719 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1927227 (PMID:16510504), (PMID:7628699), (PMID:9192865)		 Ensembl
RGD		 PMID:7628699 PMID:9192865 PMID:16510504 GO_REF:0000107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:106676 (PMID:16496285) RGD PMID:16496285 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO UniProtKB:O35516 (MGI:2661305|PMID:12730124) RGD PMID:12730124 MGI:2661305 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Notch2 notch receptor 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q01705 (MGI:2661305|PMID:12730124)		 Ensembl
RGD		 PMID:12730124 GO_REF:0000107 MGI:2661305 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO MGI:3053092 (PMID:17884984) RGD PMID:17884984 NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931), (PMID:20007846) RGD PMID:18371931 PMID:20007846 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3777011 (PMID:17573777) RGD PMID:17573777 NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) RGD PMID:21719175 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284 (PMID:10557208) RGD PMID:10557208 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857796 (PMID:10411502), (PMID:10500184)
(MGI:5142377|PMID:11517919)		 Ensembl
RGD		 PMID:10411502 PMID:10500184 PMID:11517919 GO_REF:0000107 MGI:5142377 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (PMID:15183723) RGD PMID:15183723 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5142377|PMID:11517919)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:11517919 GO_REF:0000024 GO_REF:0000107 MGI:5142377 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 ISO (MGI:3716378|PMID:17655922)
MGI:2179440 (PMID:17610846)		 RGD PMID:17610846 PMID:17655922 MGI:3716378 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2385465|MGI:2386742 (PMID:15929941) RGD PMID:15929941 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (PMID:10385121) RGD PMID:10385121 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO MGI:3512046 (PMID:16155214) RGD PMID:16155214 NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577 		JBrowse link
G Tbx20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (MGI:3604925|PMID:15843409)
MGI:3579849|MGI:3580099 (PMID:15843407), (PMID:15901664)
GO_REF:0000033		 RGD
GO_Central		 PMID:15843407 PMID:15843409 PMID:15901664 GO_REF:0000033 MGI:3604925 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:2655214|MGI:3769504 (PMID:17460765), (PMID:18723448) RGD PMID:17460765 PMID:18723448 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx6 T-box transcription factor 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:181,387,851...181,392,762
Ensembl chr 1:181,388,684...181,392,593 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA		 (MGI:3801267|PMID:17050629)
GO_REF:0000107		 RGD
Ensembl		 PMID:17050629 GO_REF:0000107 MGI:3801267 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4343479|MGI:4456438 (PMID:20178780)		 Ensembl
RGD		 PMID:20178780 GO_REF:0000107 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 involved_in ISO (MGI:2157686|PMID:11440971) RGD PMID:11440971 MGI:2157686 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (PMID:16291790) RGD PMID:16291790 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1298218 (PMID:19795512)		 Ensembl
RGD		 PMID:19795512 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Zic3 Zic family member 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:9354794)
MGI:2180720|MGI:3043027|MGI:97359 (PMID:15384171), (PMID:16496285)		 RGD PMID:9354794 PMID:15384171 PMID:16496285 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
hemangioblast cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO MGI:1857254 (PMID:15677567), (PMID:18550854), (PMID:19182774) RGD PMID:15677567 PMID:18550854 PMID:19182774 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976 		JBrowse link
in utero embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO MGI:1931734|MGI:2447280|MGI:2651395|MGI:3696672 (PMID:14729481), (PMID:15037318), (PMID:17117439) RGD PMID:14729481 PMID:15037318 PMID:17117439 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Acvr1b activin A receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857710 (PMID:15485907), (PMID:16564040)		 Ensembl
RGD		 PMID:15485907 PMID:16564040 GO_REF:0000107 NCBI chr 7:132,286,266...132,329,679
Ensembl chr 7:132,286,275...132,329,673 		JBrowse link
G Acvr1c activin A receptor type 1C NOT|acts_upstream_of_or_within ISO MGI:3512292 (PMID:15485907) RGD PMID:15485907 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327 		JBrowse link
G Acvrl1 activin A receptor like type 1 acts_upstream_of_or_within ISO MGI:2680088 (PMID:17911384) RGD PMID:17911384 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591 		JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO MGI:1857117 (PMID:7731963), (PMID:9272950) RGD PMID:7731963 PMID:9272950 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Adam10 ADAM metallopeptidase domain 10 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3522331|PMID:12354787)		 UniProt
Ensembl
RGD		 PMID:12354787 GO_REF:0000024 GO_REF:0000107 MGI:3522331 NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889 		JBrowse link
G Adamts3 ADAM metallopeptidase with thrombospondin type 1, motif 3 acts_upstream_of_or_within ISO MGI:5585728 (PMID:27996060) RGD PMID:27996060 NCBI chr14:18,231,128...18,437,771
Ensembl chr14:18,231,165...18,435,556 		JBrowse link
G Adcy9 adenylate cyclase 9 acts_upstream_of_or_within ISO MGI:5636912 (PMID:27996060) RGD PMID:27996060 NCBI chr10:11,138,966...11,262,067
Ensembl chr10:11,139,446...11,262,066 		JBrowse link
G Add1 adducin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3799499 (PMID:18723693)		 Ensembl
RGD		 PMID:18723693 GO_REF:0000107 NCBI chr14:76,108,643...76,167,267
Ensembl chr14:76,108,654...76,167,182 		JBrowse link
G Alkbh1 alkB homolog 1, histone H2A dioxygenase acts_upstream_of_or_within ISO MGI:3774031 (PMID:18163532) RGD PMID:18163532 NCBI chr 6:107,068,301...107,088,784
Ensembl chr 6:107,068,475...107,088,759 		JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 IEP RGD PMID:16049005 RGD:1599081 NCBI chr 9:60,613,182...60,686,394
Ensembl chr 9:60,613,167...60,670,737 		JBrowse link
G Amot angiomotin acts_upstream_of_or_within ISO MGI:2656627 (PMID:12676095) RGD PMID:12676095 NCBI chr  X:108,982,399...109,041,265
Ensembl chr  X:108,984,022...109,041,272 		JBrowse link
G Angpt1 angiopoietin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180145|MGI:99906 (PMID:11172728)		 Ensembl
RGD		 PMID:11172728 GO_REF:0000107 NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067 		JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO MGI:3797584 (PMID:17986521) RGD PMID:17986521 NCBI chr19:50,940,284...51,098,962
Ensembl chr19:50,940,299...51,098,962 		JBrowse link
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5637085 (PMID:27996060)		 Ensembl
RGD		 PMID:27996060 GO_REF:0000107 NCBI chr 5:61,309,183...61,350,596
Ensembl chr 5:61,309,183...61,350,596 		JBrowse link
G Apba1 amyloid beta precursor protein binding family A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1261791|MGI:1888527 (PMID:17167098)		 Ensembl
RGD		 PMID:17167098 GO_REF:0000107 NCBI chr 1:221,363,769...221,569,496
Ensembl chr 1:221,363,778...221,566,553 		JBrowse link
G Apba2 amyloid beta precursor protein binding family A member 2 acts_upstream_of_or_within ISO MGI:1860297 (PMID:17167098) RGD PMID:17167098 NCBI chr 1:118,053,270...118,286,858
Ensembl chr 1:118,103,219...118,285,699 		JBrowse link
G Apba3 amyloid beta precursor protein binding family A member 3 acts_upstream_of_or_within ISO MGI:1860297 (PMID:17167098) RGD PMID:17167098 NCBI chr 7:8,446,212...8,451,310
Ensembl chr 7:8,446,216...8,451,241 		JBrowse link
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857625|MGI:2157775 (PMID:7878058), (PMID:9502790)		 Ensembl
RGD		 PMID:7878058 PMID:9502790 GO_REF:0000107 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497 		JBrowse link
G Ar androgen receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856319 (PMID:10319319)		 Ensembl
RGD		 PMID:10319319 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within ISO MGI:6098706 (PMID:28169274) RGD PMID:28169274 NCBI chr 1:182,820,141...182,826,913
Ensembl chr 1:182,820,141...182,826,907 		JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO (MGI:2448795|PMID:12502753) RGD PMID:12502753 MGI:2448795 NCBI chr 1:138,236,235...138,392,868
Ensembl chr 1:138,189,940...138,393,153 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:2153832 (PMID:8090202) RGD PMID:8090202 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Atf2 activating transcription factor 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:2443472|MGI:3720850 (PMID:17699753)		 Ensembl
RGD		 PMID:17699753 GO_REF:0000107 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
G Atf7 activating transcription factor 7 involved_in ISO MGI:109349 (PMID:17699753) RGD PMID:17699753 NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848 		JBrowse link
G Atp11a ATPase phospholipid transporting 11A acts_upstream_of_or_within ISO MGI:4363953 (PMID:27996060) RGD PMID:27996060 NCBI chr16:76,657,752...76,767,640
Ensembl chr16:76,657,752...76,767,640 		JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:10864443 RGD:1599395 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3840236|MGI:3840238|MGI:88276 (PMID:19204372)		 Ensembl
RGD		 PMID:19204372 GO_REF:0000107 NCBI chr10:15,163,477...15,215,615
Ensembl chr10:15,163,684...15,215,615 		JBrowse link
G B9d1 B9 domain containing 1 acts_upstream_of_or_within ISO MGI:5301332 (PMID:22179047) RGD PMID:22179047 NCBI chr10:46,186,222...46,196,309
Ensembl chr10:46,186,691...46,196,008 		JBrowse link
G Bap1 Brca1 associated protein 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:5439653 (PMID:22878500)		 Ensembl
RGD		 PMID:22878500 GO_REF:0000107 NCBI chr16:6,446,709...6,455,535
Ensembl chr16:6,446,709...6,455,535 		JBrowse link
G Bcl2l1 Bcl2-like 1 acts_upstream_of_or_within ISO MGI:2158303 (PMID:10618441) RGD PMID:10618441 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479 		JBrowse link
G Bcl2l11 Bcl2-like 11 acts_upstream_of_or_within ISO MGI:97603 (PMID:16282979) RGD PMID:16282979 NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:99161 (PMID:11290297) RGD PMID:11290297 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3583785 (PMID:16314491)		 Ensembl
RGD		 PMID:16314491 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158342|MGI:2158390 (PMID:17359964) RGD PMID:17359964 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Brk1 BRICK1 subunit of SCAR/WAVE actin nucleating complex acts_upstream_of_or_within ISO MGI:3872157 (PMID:20861187) RGD PMID:20861187 NCBI chr 4:146,750,821...146,766,050
Ensembl chr 4:146,750,821...146,768,856 		JBrowse link
G Btf3 basic transcription factor 3 acts_upstream_of_or_within ISO MGI:3688730 (PMID:7655515) RGD PMID:7655515 NCBI chr 2:29,659,764...29,666,898
Ensembl chr 2:29,659,231...29,666,879 		JBrowse link
G Bysl bystin-like acts_upstream_of_or_within ISO MGI:3697441 (PMID:17055491) RGD PMID:17055491 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339 		JBrowse link
G C19h19orf67 similar to human chromosome 19 open reading frame 67 acts_upstream_of_or_within ISO MGI:5289829 (PMID:27996060) RGD PMID:27996060 NCBI chr19:24,146,815...24,150,983
Ensembl chr19:24,146,815...24,150,095 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520 		JBrowse link
G C5 complement C5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:88513 (PMID:18947875)		 Ensembl
RGD		 PMID:18947875 GO_REF:0000107 NCBI chr 3:18,270,696...18,361,994
Ensembl chr 3:18,270,696...18,361,994 		JBrowse link
G C6 complement C6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:88513 (PMID:18947875)		 Ensembl
RGD		 PMID:18947875 GO_REF:0000107 NCBI chr 2:53,846,028...53,921,279
Ensembl chr 2:53,851,985...53,921,275 		JBrowse link
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 acts_upstream_of_or_within ISO MGI:4431915 (PMID:27996060) RGD PMID:27996060 NCBI chr12:1,643,062...1,666,685
Ensembl chr12:1,643,251...1,666,685 		JBrowse link
G Ccm2 CCM2 scaffold protein acts_upstream_of_or_within ISO MGI:1924696|MGI:3512761 (PMID:19151727) RGD PMID:19151727 NCBI chr14:81,418,418...81,464,114
Ensembl chr14:81,418,236...81,464,116 		JBrowse link
G Ccnb1 cyclin B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2429976 (PMID:9539739)		 Ensembl
RGD		 PMID:9539739 GO_REF:0000107 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172 		JBrowse link
G Ccnb2 cyclin B2 acts_upstream_of_or_within ISO MGI:2429974 (PMID:9539739) RGD PMID:9539739 NCBI chr 8:71,087,594...71,100,794
Ensembl chr 8:71,087,595...71,100,874 		JBrowse link
G Ccnk cyclin K acts_upstream_of_or_within ISO MGI:4348808 (PMID:22012619) RGD PMID:22012619 NCBI chr 6:127,090,115...127,113,195
Ensembl chr 6:127,090,569...127,113,191 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:2389020 (PMID:15775979) RGD PMID:15775979 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Cdk2ap1 cyclin-dependent kinase 2 associated protein 1 acts_upstream_of_or_within ISO MGI:3512185 (PMID:19229340) RGD PMID:19229340 NCBI chr12:32,249,752...32,258,483
Ensembl chr12:32,249,747...32,258,479 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A acts_upstream_of_or_within ISO MGI:1924285 (PMID:26334721) RGD PMID:26334721 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO MGI:4433345 (PMID:27996060) RGD PMID:27996060 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786 		JBrowse link
G Cert1 ceramide transporter 1 acts_upstream_of_or_within ISO MGI:3837565|MGI:5287775 (PMID:19139267), (PMID:27996060) RGD PMID:19139267 PMID:27996060 NCBI chr 2:27,882,546...27,987,090
Ensembl chr 2:27,882,555...27,987,074 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 ISO (PMID:15300250)
MGI:3588650 (PMID:16207732)		 RGD PMID:15300250 PMID:16207732 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3530648 (PMID:15367660)		 Ensembl
RGD		 PMID:15367660 GO_REF:0000107 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285 		JBrowse link
G Chrd chordin involved_in ISO MGI:2157350 (PMID:12810603) RGD PMID:12810603 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4363643 (PMID:27996060)		 Ensembl
RGD		 PMID:27996060 GO_REF:0000107 NCBI chr 7:20,524,535...20,743,008
Ensembl chr 7:20,528,100...20,743,111 		JBrowse link
G Chtop chromatin target of PRMT1 acts_upstream_of_or_within ISO MGI:4842477 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:175,981,266...175,992,820
Ensembl chr 2:175,981,271...175,992,748 		JBrowse link
G Cir1 corepressor interacting with RBPJ, 1 acts_upstream_of_or_within ISO MGI:5577261 (PMID:27996060) RGD PMID:27996060 NCBI chr 3:58,158,923...58,188,799
Ensembl chr 3:58,158,951...58,188,789 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (PMID:16579983) RGD PMID:16579983 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Cmip c-Maf-inducing protein acts_upstream_of_or_within ISO MGI:5286409 (PMID:27996060) RGD PMID:27996060 NCBI chr19:45,304,597...45,510,653
Ensembl chr19:45,304,031...45,508,709 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (PMID:32879327) RGD PMID:32879327 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1857431|MGI:1860700 (PMID:25330296) RGD PMID:25330296 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Cops3 COP9 signalosome subunit 3 acts_upstream_of_or_within ISO MGI:2678261 (PMID:12972600) RGD PMID:12972600 NCBI chr10:44,618,115...44,652,807
Ensembl chr10:44,618,115...44,641,597 		JBrowse link
G Coq7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO MGI:2157003|MGI:2158322 (PMID:11585841), (PMID:11716496) RGD PMID:11585841 PMID:11716496 NCBI chr 1:172,836,359...172,851,173
Ensembl chr 1:172,835,188...172,851,158 		JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5636913 (PMID:27996060)		 Ensembl
RGD		 PMID:27996060 GO_REF:0000107 NCBI chr 5:122,664,677...122,682,126
Ensembl chr 5:122,664,677...122,682,095 		JBrowse link
G Cr1l complement C3b/C4b receptor 1 like acts_upstream_of_or_within ISO MGI:88233 (PMID:18947875) RGD PMID:18947875 NCBI chr13:106,606,952...106,660,442
Ensembl chr13:106,574,858...106,660,445 		JBrowse link
G Cripto cripto, EGF-CFC family member acts_upstream_of_or_within ISO MGI:1857518 (PMID:9876177) RGD PMID:9876177 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308 		JBrowse link
G Ctcf CCCTC-binding factor acts_upstream_of_or_within ISO (PMID:28846746) RGD PMID:28846746 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1096327|MGI:2148567 (PMID:18231602), (PMID:19204372)		 Ensembl
RGD		 PMID:18231602 PMID:19204372 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Cubn cubilin IDA RGD PMID:15616221 RGD:1599657 NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231 		JBrowse link
G Cul3 cullin 3 acts_upstream_of_or_within ISO MGI:2651546 (PMID:10500095) RGD PMID:10500095 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Cul4a cullin 4A involved_in ISO (MGI:2183132|PMID:12077329) RGD PMID:12077329 MGI:2183132 NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330 		JBrowse link
G Dab2 DAB adaptor protein 2 acts_upstream_of_or_within ISO MGI:2429678 (PMID:12413896) RGD PMID:12413896 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476 		JBrowse link
G Dbn1 drebrin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5501061 (PMID:27996060)		 Ensembl
RGD		 PMID:27996060 GO_REF:0000107 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984 		JBrowse link
G Dhx35 DEAH-box helicase 35 acts_upstream_of_or_within ISO MGI:5637055 (PMID:27996060) RGD PMID:27996060 NCBI chr 3:147,450,178...147,507,473
Ensembl chr 3:147,450,163...147,507,451 		JBrowse link
G Diaph3 diaphanous-related formin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5574347 (PMID:24239357)		 Ensembl
RGD		 PMID:24239357 GO_REF:0000107 NCBI chr15:62,543,375...63,013,060
Ensembl chr15:62,543,375...63,012,975 		JBrowse link
G Dnaaf2 dynein, axonemal, assembly factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5532530 (PMID:31107948)		 Ensembl
RGD		 PMID:31107948 GO_REF:0000107 NCBI chr 6:87,661,101...87,670,267
Ensembl chr 6:87,660,821...87,670,199 		JBrowse link
G Dsc3 desmocollin 3 acts_upstream_of_or_within ISO MGI:3615340 (PMID:16418220) RGD PMID:16418220 NCBI chr18:11,379,759...11,413,797
Ensembl chr18:11,377,347...11,413,797 		JBrowse link
G Dusp3 dual specificity phosphatase 3 IDA RGD PMID:18035061 RGD:2317890 NCBI chr10:86,920,014...86,933,739
Ensembl chr10:86,920,014...86,933,962 		JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO MGI:1857637 (PMID:15327783) RGD PMID:15327783 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Ednra endothelin receptor type A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15327783)		 Ensembl
RGD		 PMID:15327783 GO_REF:0000107 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Egfl8 EGF-like-domain, multiple 8 NOT|involved_in ISS
ISO		 GO_REF:0000024
(MGI:3042772|PMID:15162510)		 UniProt
RGD		 PMID:15162510 GO_REF:0000024 MGI:3042772 NCBI chr20:4,132,930...4,136,024
Ensembl chr20:4,133,629...4,136,018 		JBrowse link
G Eif2s2 eukaryotic translation initiation factor 2 subunit beta acts_upstream_of_or_within ISO MGI:3838881 (PMID:19168544) RGD PMID:19168544 NCBI chr 3:143,374,652...143,395,460
Ensembl chr 3:143,373,686...143,395,432 		JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 acts_upstream_of_or_within ISO MGI:5444035 (PMID:22751931) RGD PMID:22751931 NCBI chr 9:87,886,126...87,914,470
Ensembl chr 9:87,878,085...87,914,482 		JBrowse link
G Ell elongation factor for RNA polymerase II acts_upstream_of_or_within ISO MGI:1933265 (PMID:11118326) RGD PMID:11118326 NCBI chr16:18,843,775...18,891,484
Ensembl chr16:18,843,780...18,891,118 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:894681 (PMID:23861879) RGD PMID:23861879 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613 		JBrowse link
G Endog endonuclease G acts_upstream_of_or_within ISO MGI:3034030|MGI:3514265 (PMID:14663139) RGD PMID:14663139 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932 		JBrowse link
G Eno1 enolase 1 acts_upstream_of_or_within ISO MGI:3050549 (PMID:9626503) RGD PMID:9626503 NCBI chr 5:160,719,951...160,731,337
Ensembl chr 5:160,719,951...160,731,336 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (PMID:18794329) RGD PMID:18794329 NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360 		JBrowse link
G Epn1 Epsin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1333766 (PMID:19666558)		 Ensembl
RGD		 PMID:19666558 GO_REF:0000107 NCBI chr 1:68,742,491...68,760,570
Ensembl chr 1:68,742,789...68,758,874 		JBrowse link
G Epn2 epsin 2 acts_upstream_of_or_within ISO MGI:1333763 (PMID:19666558) RGD PMID:19666558 NCBI chr10:46,197,785...46,259,673
Ensembl chr10:46,197,785...46,259,642 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:3693615|MGI:3696121 (PMID:17020410) RGD PMID:17020410 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Erf Ets2 repressor factor acts_upstream_of_or_within ISO MGI:3719472 (PMID:17502352) RGD PMID:17502352 NCBI chr 1:80,829,935...80,838,388
Ensembl chr 1:80,829,935...80,838,388 		JBrowse link
G Esrrb estrogen-related receptor beta acts_upstream_of_or_within ISO MGI:1857422 (PMID:9285590) RGD PMID:9285590 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Etnk2 ethanolamine kinase 2 acts_upstream_of_or_within ISO MGI:3526407 (PMID:16861741) RGD PMID:16861741 NCBI chr13:44,811,012...44,829,052
Ensembl chr13:44,811,015...44,829,037 		JBrowse link
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO MGI:4415819 (PMID:18462699) RGD PMID:18462699 NCBI chr 1:85,890,562...85,894,025
Ensembl chr 1:85,890,559...85,893,431 		JBrowse link
G Exoc3l2 exocyst complex component 3-like 2 acts_upstream_of_or_within ISO MGI:5548646 (PMID:27996060) RGD PMID:27996060 NCBI chr 1:79,113,784...79,145,359
Ensembl chr 1:79,112,506...79,145,465 		JBrowse link
G Fendrr FOXF1 adjacent non-coding developmental regulatory RNA involved_in ISO MGI:5563522 (PMID:25909911) RGD PMID:25909911 NCBI chr19:49,127,225...49,152,780
Ensembl chr19:49,121,214...49,153,240 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:95523 (PMID:17687036) RGD PMID:17687036 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153790|MGI:95522 (PMID:17687036), (PMID:9435295) RGD PMID:9435295 PMID:17687036 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO MGI:5432211 (PMID:24777781) RGD PMID:24777781 NCBI chr10:85,345,434...85,357,998
Ensembl chr10:85,346,126...85,427,330 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4835411 (PMID:23591631), (PMID:28039900) RGD PMID:23591631 PMID:28039900 NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992 		JBrowse link
G Flcn folliculin involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:4348628 (PMID:21258407)		 UniProt
RGD		 PMID:21258407 GO_REF:0000024 NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769 		JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 acts_upstream_of_or_within ISO MGI:3776021 (PMID:18258918) RGD PMID:18258918 NCBI chr13:102,586,263...102,608,647
Ensembl chr13:102,586,257...102,608,661 		JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) RGD PMID:32369453 NCBI chr 6:105,408,355...105,472,355
Ensembl chr 6:105,408,339...105,472,353 		JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2385824 (PMID:11044407) RGD PMID:11044407 NCBI chr 1:202,754,549...202,763,057
Ensembl chr 1:202,754,529...202,764,930 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:9152011) RGD PMID:9152011 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1856705 (PMID:4819561) RGD PMID:4819561 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Foxd3 forkhead box D3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2388404|PMID:12381664)		 UniProt
RGD		 PMID:12381664 GO_REF:0000024 MGI:2388404 NCBI chr 5:114,335,084...114,337,450
Ensembl chr 5:114,335,408...114,336,817 		JBrowse link
G Foxf1 forkhead box F1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19500772)
MGI:1929432 (PMID:11124112), (PMID:11493558)		 RGD PMID:11124112 PMID:11493558 PMID:19500772 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha acts_upstream_of_or_within ISO MGI:3665313 (PMID:17485447) RGD PMID:17485447 NCBI chr11:23,888,586...23,917,612
Ensembl chr11:23,888,815...23,917,605 		JBrowse link
G Gata1 GATA binding protein 1 acts_upstream_of_or_within ISO MGI:2429992 (PMID:9576834) RGD PMID:9576834 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:3696958 (PMID:20702712) RGD PMID:20702712 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2179443|MGI:2386265|MGI:3033220|MGI:3793424 (PMID:15310850), (PMID:20123909), (PMID:9136932), (PMID:9136933) RGD PMID:9136932 PMID:9136933 PMID:15310850 PMID:20123909 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2177785|MGI:3793425 (PMID:20123909), (PMID:9832509)		 Ensembl
RGD		 PMID:9832509 PMID:20123909 GO_REF:0000107 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) RGD PMID:17565372 NCBI chr16:19,429,578...19,520,320
Ensembl chr16:19,429,578...19,519,587 		JBrowse link
G Gdf1 growth differentiation factor 1 acts_upstream_of_or_within ISO MGI:2181719 (PMID:17936261) RGD PMID:17936261 NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,097,314...19,112,519 		JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within ISO MGI:3612535|MGI:3764814|MGI:95683 (PMID:16368929), (PMID:17936261) RGD PMID:16368929 PMID:17936261 NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:1857177 (PMID:9486664) RGD PMID:9486664 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gjb3 gap junction protein, beta 3 IEP RGD PMID:9291584 RGD:1599752 NCBI chr 5:139,649,227...139,654,970
Ensembl chr 5:139,649,195...139,654,980 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:3834146 (PMID:19056373) RGD PMID:19056373 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:16254602) RGD PMID:16254602 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gna12 G protein subunit alpha 12 acts_upstream_of_or_within ISO MGI:95768 (PMID:12077299) RGD PMID:12077299 NCBI chr12:13,805,580...13,886,255
Ensembl chr12:13,805,698...13,886,255 		JBrowse link
G Gna13 G protein subunit alpha 13 acts_upstream_of_or_within ISO MGI:95767 (PMID:12077299) RGD PMID:12077299 NCBI chr10:94,337,939...94,370,774
Ensembl chr10:94,337,725...94,370,774 		JBrowse link
G Gpi glucose-6-phosphate isomerase acts_upstream_of_or_within ISO MGI:1932543 (PMID:1582174) RGD PMID:1582174 NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4331210 (PMID:21262862) RGD PMID:21262862 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B acts_upstream_of_or_within ISO MGI:1928295 (PMID:9147327) RGD PMID:9147327 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279 		JBrowse link
G H19 H19 imprinted maternally expressed transcript IMP RGD PMID:18778817 RGD:5509951 NCBI chr 1:197,730,698...197,733,374
Ensembl chr 1:197,730,698...197,733,134 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO MGI:2153823 (PMID:9500551) RGD PMID:9500551 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857639 (PMID:9171826)		 Ensembl
RGD		 PMID:9171826 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Hba-a1 hemoglobin alpha, adult chain 1 acts_upstream_of_or_within ISO MGI:96016 (PMID:7550311) RGD PMID:7550311 NCBI chr10:15,337,265...15,338,121
Ensembl chr10:15,307,815...15,338,392 		JBrowse link
G Hba-a2 hemoglobin alpha, adult chain 2 acts_upstream_of_or_within ISO MGI:96015 (PMID:7550311) RGD PMID:7550311 NCBI chr10:15,323,830...15,324,677
Ensembl chr10:15,307,815...15,338,392 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 acts_upstream_of_or_within ISO MGI:2684538 (PMID:14657344) RGD PMID:14657344 NCBI chr 8:59,222,206...59,259,626
Ensembl chr 8:59,221,653...59,259,639 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISO MGI:4889069 (PMID:32467224) RGD PMID:32467224 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856 		JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within ISO MGI:2384924|MGI:3838392 (PMID:19151727) RGD PMID:19151727 NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:104877 (PMID:11500373) RGD PMID:11500373 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO MGI:104853 (PMID:11500373) RGD PMID:11500373 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:4999724 (PMID:21445260) RGD PMID:21445260 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Hinfp histone H4 transcription factor involved_in ISO (MGI:3851835|PMID:19590016) RGD PMID:19590016 MGI:3851835 NCBI chr 8:44,634,333...44,644,288
Ensembl chr 8:44,634,333...44,641,000 		JBrowse link
G Hm13 histocompatibility minor 13 acts_upstream_of_or_within ISO MGI:5637209 (PMID:27996060) RGD PMID:27996060 NCBI chr 3:141,145,792...141,183,557
Ensembl chr 3:141,145,782...141,184,703 		JBrowse link
G Hsd17b2 hydroxysteroid (17-beta) dehydrogenase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3773836 (PMID:18048640)		 Ensembl
RGD		 PMID:18048640 GO_REF:0000107 NCBI chr19:45,753,576...45,825,203
Ensembl chr19:45,753,574...45,825,202 		JBrowse link
G Hsf1 heat shock transcription factor 1 acts_upstream_of_or_within ISO MGI:2155444 (PMID:10545106) RGD PMID:10545106 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase acts_upstream_of_or_within ISO MGI:2183607|MGI:2680650 (PMID:11121396), (PMID:12105862) RGD PMID:11121396 PMID:12105862 NCBI chr 5:162,804,368...162,811,129
Ensembl chr 5:162,804,368...162,811,128 		JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 involved_in ISO (MGI:5607401|PMID:20838829) RGD PMID:20838829 MGI:5607401 NCBI chr 1:196,045,836...196,052,554
Ensembl chr 1:196,045,666...196,047,232 		JBrowse link
G Igf2 insulin-like growth factor 2 involved_in ISO (MGI:5908476|PMID:28522536) RGD PMID:28522536 MGI:5908476 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:17881493) RGD PMID:17881493 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Inpp5b inositol polyphosphate-5-phosphatase B acts_upstream_of_or_within ISO MGI:109589 (PMID:20195868) RGD PMID:20195868 NCBI chr 5:136,996,766...137,061,315
Ensembl chr 5:136,996,686...137,061,315 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K acts_upstream_of_or_within ISO MGI:3810936 (PMID:18573875) RGD PMID:18573875 NCBI chr10:60,474,262...60,495,813
Ensembl chr10:60,475,897...60,496,773 		JBrowse link
G Insl3 insulin-like 3 acts_upstream_of_or_within ISO MGI:2661997 (PMID:10319319) RGD PMID:10319319 NCBI chr16:18,398,682...18,400,566
Ensembl chr16:18,384,829...18,400,560 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2154539 (PMID:7544313)		 Ensembl
RGD		 PMID:7544313 GO_REF:0000107 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2657215 (PMID:9531541)		 Ensembl
RGD		 PMID:9531541 GO_REF:0000107 NCBI chr 6:131,983,059...132,005,665
Ensembl chr 6:131,983,056...132,005,818 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2153821 (PMID:10022836) RGD PMID:10022836 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035 		JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:2386279|MGI:3711317 (PMID:17325035) RGD PMID:17325035 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) RGD PMID:25463925 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within ISO MGI:4126347|MGI:5448825|MGI:5516011 (PMID:22949634), (PMID:23028370) RGD PMID:22949634 PMID:23028370 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062 		JBrowse link
G Kdm8 lysine demethylase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104556|MGI:98834 (PMID:26334721)		 Ensembl
RGD		 PMID:26334721 GO_REF:0000107 NCBI chr 1:180,013,969...180,028,829
Ensembl chr 1:180,020,656...180,028,841 		JBrowse link
G Keap1 Kelch-like ECH-associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2681416 (PMID:15087497)		 Ensembl
RGD		 PMID:15087497 GO_REF:0000107 NCBI chr 8:19,768,375...19,777,862
Ensembl chr 8:19,768,375...19,777,862 		JBrowse link
G Kidins220 kinase D-interacting substrate 220 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4820793 (PMID:19449316)		 Ensembl
RGD		 PMID:19449316 GO_REF:0000107 NCBI chr 6:41,618,207...41,706,990
Ensembl chr 6:41,618,294...41,703,256 		JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:1329045 (PMID:19286674) RGD PMID:19286674 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Kifbp kinesin family binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4939684 (PMID:27996060)		 Ensembl
RGD		 PMID:27996060 GO_REF:0000107 NCBI chr20:30,512,899...30,532,504
Ensembl chr20:30,512,901...30,532,476 		JBrowse link
G Klf1 KLF transcription factor 1 acts_upstream_of_or_within ISO MGI:1857557 (PMID:7753194) RGD PMID:7753194 NCBI chr19:23,250,627...23,253,802
Ensembl chr19:23,250,631...23,253,758 		JBrowse link
G Klf2 KLF transcription factor 2 acts_upstream_of_or_within ISO MGI:3047647 (PMID:15947087), (PMID:9859212) RGD PMID:9859212 PMID:15947087 NCBI chr16:17,521,107...17,523,739
Ensembl chr16:17,514,552...17,523,944 		JBrowse link
G Kmt2d lysine methyltransferase 2D acts_upstream_of_or_within ISO MGI:3623309 (PMID:16540515) RGD PMID:16540515 NCBI chr 7:129,980,744...130,022,088
Ensembl chr 7:129,962,887...130,020,325 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857720|MGI:1857732 (PMID:10911993), (PMID:16777961), (PMID:9823897) RGD PMID:9823897 PMID:10911993 PMID:16777961 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Lrp1b LDL receptor related protein 1B acts_upstream_of_or_within ISO MGI:4459742|MGI:4459800 (PMID:20383322) RGD PMID:20383322 NCBI chr 3:24,594,302...26,715,037
Ensembl chr 3:24,594,991...26,715,505 		JBrowse link
G Ly6e lymphocyte antigen 6 family member E acts_upstream_of_or_within ISO MGI:2429638 (PMID:11784869) RGD PMID:11784869 NCBI chr 7:106,935,530...106,939,689
Ensembl chr 7:106,935,761...106,939,689 		JBrowse link
G Maff MAF bZIP transcription factor F acts_upstream_of_or_within ISO MGI:1858732|MGI:96911 (PMID:15087497) RGD PMID:15087497 NCBI chr 7:110,912,367...110,923,711
Ensembl chr 7:110,912,499...110,923,851 		JBrowse link
G Mafg MAF bZIP transcription factor G acts_upstream_of_or_within ISO MGI:1858732 (PMID:15087497) RGD PMID:15087497 NCBI chr10:105,903,307...105,911,808
Ensembl chr10:105,903,237...105,912,026 		JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 acts_upstream_of_or_within ISO MGI:2150656 (PMID:16754854) RGD PMID:16754854 NCBI chr 9:104,252,001...104,408,349
Ensembl chr 9:104,252,001...104,408,349 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3527900 (PMID:18324732)		 Ensembl
RGD		 PMID:18324732 GO_REF:0000107 NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273 		JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 acts_upstream_of_or_within ISO MGI:2388006 (PMID:17287250) RGD PMID:17287250 NCBI chr 7:9,312,961...9,320,166
Ensembl chr 7:9,313,098...9,320,165 		JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 involved_in ISO (MGI:2675975|PMID:12915312) RGD PMID:12915312 MGI:2675975 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:2158381 (PMID:17029558) RGD PMID:17029558 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2684189 (PMID:14500757) RGD PMID:14500757 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Meg3 maternally expressed 3 acts_upstream_of_or_within ISO MGI:3842511|MGI:4840060 (PMID:19264764), (PMID:20610486) RGD PMID:19264764 PMID:20610486 NCBI chr 6:128,491,808...128,524,010 JBrowse link
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO MGI:1857564 (PMID:8290590) RGD PMID:8290590 NCBI chr10:33,563,642...33,582,718
Ensembl chr10:33,561,388...33,591,503 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3603514 (PMID:16000382) RGD PMID:16000382 NCBI chr18:1,802,519...1,926,988
Ensembl chr18:1,802,519...1,920,689 		JBrowse link
G Mir106b microRNA 106b acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr12:17,043,344...17,043,425
Ensembl chr12:17,043,344...17,043,425 		JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712 		JBrowse link
G Mir18a microRNA 18a acts_upstream_of_or_within ISO MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860 		JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993 		JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300 		JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO MGI:2676844|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168 		JBrowse link
G Mir25 microRNA 25 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr12:17,042,932...17,043,015
Ensembl chr12:17,042,932...17,043,015 		JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413 		JBrowse link
G Mir93 microRNA 93 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221 		JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within ISO (PMID:34486668) RGD PMID:34486668 NCBI chr 1:175,217,680...175,288,521
Ensembl chr 1:175,217,545...175,288,334 		JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within ISO MGI:3587937 (PMID:17183527) RGD PMID:17183527 NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897 		JBrowse link
G Msh2 mutS homolog 2 involved_in
NOT|acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:98834 (PMID:9425892)
MGI:98834 (PMID:9288110)		 Ensembl
RGD		 PMID:9288110 PMID:9425892 GO_REF:0000107 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:1926386 (PMID:17601530) RGD PMID:17601530 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Mt-nd4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 IEP RGD PMID:17307910 RGD:2302308 NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
Ensembl chr MT:10,160...11,537 		JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 acts_upstream_of_or_within ISO MGI:105373 (PMID:21406566) RGD PMID:21406566 NCBI chr 7:90,488,751...90,628,007
Ensembl chr 7:90,488,754...90,627,968 		JBrowse link
G Muc1 mucin 1, cell surface associated IEP RGD PMID:21263748 RGD:7349384 NCBI chr 2:174,635,989...174,640,738
Ensembl chr 2:174,635,995...174,640,733 		JBrowse link
G Myb MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO MGI:2662859|MGI:3047076 (PMID:10523863), (PMID:17927961) RGD PMID:10523863 PMID:17927961 NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057 		JBrowse link
G Mybphl myosin binding protein H-like acts_upstream_of_or_within ISO MGI:5548569 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:196,005,297...196,018,826
Ensembl chr 2:196,005,325...196,018,824 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:23077551 RGD:7207883 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386445|MGI:3052104 (PMID:11283949), (PMID:12893741), (PMID:9356462) RGD PMID:9356462 PMID:11283949 PMID:12893741 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165 		JBrowse link
G Myh6 myosin heavy chain 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3652543 (PMID:8878443)		 Ensembl
RGD		 PMID:8878443 GO_REF:0000107 NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720 		JBrowse link
G Myh9 myosin, heavy chain 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3511350|MGI:3641195 (PMID:15555549), (PMID:16630581)		 Ensembl
RGD		 PMID:15555549 PMID:16630581 GO_REF:0000107 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457 		JBrowse link
G Myo18b myosin XVIIIb acts_upstream_of_or_within ISO MGI:3829997 (PMID:18761673) RGD PMID:18761673 NCBI chr12:43,747,003...43,953,694
Ensembl chr12:43,747,010...43,953,695 		JBrowse link
G Myo1e myosin IE acts_upstream_of_or_within ISO MGI:3526864 (PMID:17143286) RGD PMID:17143286 NCBI chr 8:70,887,934...71,080,180
Ensembl chr 8:70,887,870...71,080,169 		JBrowse link
G N4bp2l2 NEDD4 binding protein 2-like 2 acts_upstream_of_or_within ISO (PMID:18360097) RGD PMID:18360097 NCBI chr12:137,342...200,292
Ensembl chr12:103,590...197,784 		JBrowse link
G Nbn nibrin involved_in ISS
ISO		 GO_REF:0000024
(MGI:2680772|PMID:14612522)		 UniProt
RGD		 PMID:14612522 GO_REF:0000024 MGI:2680772 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (PMID:16831833) RGD PMID:16831833 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in ISO MGI:1337080 (PMID:32467224) RGD PMID:32467224 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within
involved_in		 ISO MGI:3765904 (PMID:17928865)
MGI:1349717 (PMID:32467224)		 RGD PMID:17928865 PMID:32467224 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319 		JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 acts_upstream_of_or_within ISO MGI:2178449 (PMID:11062459), (PMID:18804437) RGD PMID:11062459 PMID:18804437 NCBI chr 1:67,778,037...67,810,941
Ensembl chr 1:67,777,948...68,023,736 		JBrowse link
G Nmt1 N-myristoyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3586313 (PMID:15753093)		 Ensembl
RGD		 PMID:15753093 GO_REF:0000107 NCBI chr10:87,988,826...88,025,405
Ensembl chr10:87,988,826...88,022,648 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732|MGI:2180793 (PMID:11311163), (PMID:15485907) RGD PMID:11311163 PMID:15485907 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1862000 (PMID:17359964)		 Ensembl
RGD		 PMID:17359964 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:11732991)		 Ensembl
RGD		 PMID:11732991 GO_REF:0000107 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1857230 (PMID:7789282) RGD PMID:7789282 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Notch2 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857783 (PMID:17359302)		 Ensembl
RGD		 PMID:17359302 GO_REF:0000107 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Npat nuclear protein, co-activator of histone transcription acts_upstream_of_or_within ISO MGI:5636907 (PMID:27996060) RGD PMID:27996060 NCBI chr 8:53,932,993...53,970,875
Ensembl chr 8:53,932,993...53,970,875 		JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO MGI:2385933|MGI:3579117 (PMID:17404209) RGD PMID:17404209 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031 		JBrowse link
G Nradd neurotrophin receptor associated death domain IEP RGD PMID:12095158 RGD:1299507 NCBI chr 8:110,599,667...110,603,068
Ensembl chr 8:110,599,667...110,603,149 		JBrowse link
G Nrbp1 nuclear receptor binding protein 1 involved_in ISO (MGI:5426079|PMID:22510880) RGD PMID:22510880 MGI:5426079 NCBI chr 6:25,122,635...25,133,209
Ensembl chr 6:25,122,635...25,133,182 		JBrowse link
G Ns5atp4 NS5A transactivated protein 4 acts_upstream_of_or_within ISO MGI:4432969 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:175,494,406...175,507,281
Ensembl chr 2:175,494,304...175,510,663 		JBrowse link
G Nsrp1 nuclear speckle splicing regulatory protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3923407 (PMID:21296756)		 Ensembl
RGD		 PMID:21296756 GO_REF:0000107 NCBI chr10:61,880,807...61,914,471
Ensembl chr10:61,880,825...61,914,471 		JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 acts_upstream_of_or_within ISO MGI:4432654 (PMID:27996060) RGD PMID:27996060 NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862 		JBrowse link
G Nxn nucleoredoxin acts_upstream_of_or_within ISO MGI:5548389 (PMID:27996060) RGD PMID:27996060 NCBI chr10:61,109,322...61,247,578
Ensembl chr10:61,110,020...61,248,251 		JBrowse link
G Ocrl OCRL, inositol polyphosphate-5-phosphatase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:103257 (PMID:20195868)		 Ensembl
RGD		 PMID:20195868 GO_REF:0000107 NCBI chr  X:127,089,508...127,140,362
Ensembl chr  X:127,089,590...127,140,362 		JBrowse link
G Ooep oocyte expressed protein acts_upstream_of_or_within ISO MGI:3812181 (PMID:18804437) RGD PMID:18804437 NCBI chr 8:79,223,388...79,224,554
Ensembl chr 8:79,223,375...79,224,541 		JBrowse link
G Otud7b OTU deubiquitinase 7B acts_upstream_of_or_within ISO MGI:5637162 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:183,661,955...183,722,584
Ensembl chr 2:183,662,163...183,718,674 		JBrowse link
G P2ry2 purinergic receptor P2Y2 IEP RGD PMID:14517997 RGD:2316694 NCBI chr 1:155,352,050...155,367,423
Ensembl chr 1:155,351,165...155,367,632 		JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO MGI:5495930 (PMID:23657012) RGD PMID:23657012 NCBI chr 1:176,665,076...176,689,053
Ensembl chr 1:176,665,076...176,688,990 		JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within ISO MGI:88174 (PMID:11290297) RGD PMID:11290297 NCBI chr10:82,682,563...82,694,563
Ensembl chr10:82,683,553...82,693,406 		JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1926728 (PMID:10331973), (PMID:17143286)		 Ensembl
RGD		 PMID:10331973 PMID:17143286 GO_REF:0000107 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta acts_upstream_of_or_within ISO MGI:2135508 (PMID:17143286) RGD PMID:17143286 NCBI chr18:54,499,962...54,538,840
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
G Pdzk1 PDZ domain containing 1 acts_upstream_of_or_within ISO MGI:5692756 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:184,376,161...184,407,514
Ensembl chr 2:184,376,161...184,407,514 		JBrowse link
G Pitpnb phosphatidylinositol transfer protein, beta acts_upstream_of_or_within ISO MGI:3582490 (PMID:11907258) RGD PMID:11907258 NCBI chr12:45,249,308...45,298,388
Ensembl chr12:45,249,333...45,298,314 		JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:2136268 (PMID:11493526) RGD PMID:11493526 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO MGI:1197519|MGI:1857562 (PMID:16282979) RGD PMID:16282979 NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128 		JBrowse link
G Plcg1 phospholipase C, gamma 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2388142 (PMID:11744703)		 Ensembl
RGD		 PMID:11744703 GO_REF:0000107 NCBI chr 3:149,385,587...149,416,330
Ensembl chr 3:149,385,587...149,416,330 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3620600|MGI:3620601 (PMID:16467571)		 Ensembl
RGD		 PMID:16467571 GO_REF:0000107 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960 		JBrowse link
G Polb DNA polymerase beta acts_upstream_of_or_within ISO MGI:4950969 (PMID:27996060) RGD PMID:27996060 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit acts_upstream_of_or_within ISO MGI:5470227 (PMID:23197651) RGD PMID:23197651 NCBI chr10:91,712,586...91,723,008
Ensembl chr10:91,712,586...91,723,008 		JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO MGI:3605483 (PMID:15750184) RGD PMID:15750184 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488 		JBrowse link
G Prkcsh PRKCSH beta subunit of glucosidase II acts_upstream_of_or_within ISO MGI:5442302 (PMID:21685914) RGD PMID:21685914 NCBI chr 8:20,534,787...20,546,493
Ensembl chr 8:20,534,880...20,546,492 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 acts_upstream_of_or_within ISO MGI:2448365 (PMID:10848611) RGD PMID:10848611 NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345 		JBrowse link
G Prrc2b proline-rich coiled-coil 2B acts_upstream_of_or_within ISO MGI:4461729 (PMID:27996060) RGD PMID:27996060 NCBI chr 3:15,433,357...15,519,105
Ensembl chr 3:15,465,294...15,519,104 		JBrowse link
G Psph phosphoserine phosphatase acts_upstream_of_or_within ISO MGI:4950198 (PMID:27996060) RGD PMID:27996060 NCBI chr12:26,882,524...26,905,084
Ensembl chr12:26,883,133...26,905,074 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:2384818 (PMID:21406566) RGD PMID:21406566 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5014612 (PMID:27996060)		 Ensembl
RGD		 PMID:27996060 GO_REF:0000107 NCBI chr 8:110,693,910...110,725,458
Ensembl chr 8:110,697,485...110,719,729 		JBrowse link
G Ptprr protein tyrosine phosphatase, receptor type, R involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:10601328)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:10601328 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:51,662,595...51,929,605
Ensembl chr 7:51,662,595...51,929,603 		JBrowse link
G Rad51b RAD51 paralog B acts_upstream_of_or_within ISO MGI:3621480|MGI:98834 (PMID:10567591) RGD PMID:10567591 NCBI chr 6:98,096,525...98,640,988
Ensembl chr 6:98,098,868...98,640,979 		JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase acts_upstream_of_or_within ISO MGI:3711066 (PMID:17470788) RGD PMID:17470788 NCBI chr 1:177,503,988...177,537,397
Ensembl chr 1:177,503,313...177,535,678 		JBrowse link
G Rcn1 reticulocalbin 1 acts_upstream_of_or_within ISO (PMID:19474196) RGD PMID:19474196 NCBI chr 3:91,841,052...91,855,295
Ensembl chr 3:91,841,052...91,855,295 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) RGD PMID:17473173 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Resp18 regulated endocrine-specific protein 18 acts_upstream_of_or_within ISO MGI:4949626 (PMID:21104147) RGD PMID:21104147 NCBI chr 9:76,765,179...76,771,824
Ensembl chr 9:76,764,590...76,778,722 		JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3608888 (PMID:16221497)		 Ensembl
RGD		 PMID:16221497 GO_REF:0000107 NCBI chr 1:195,935,162...195,941,469
Ensembl chr 1:195,935,349...195,941,467 		JBrowse link
G Rnaseh2b ribonuclease H2, subunit B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4432164 (PMID:22802351)		 Ensembl
RGD		 PMID:22802351 GO_REF:0000107 NCBI chr15:36,541,200...36,592,016
Ensembl chr15:36,541,218...36,584,118 		JBrowse link
G Rpa1 replication protein A1 acts_upstream_of_or_within ISO MGI:3582609 (PMID:15470499) RGD PMID:15470499 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904) RGD PMID:17553904 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Rrn3 RRN3 homolog, RNA polymerase I transcription factor acts_upstream_of_or_within ISO MGI:3584037 (PMID:15989966) RGD PMID:15989966 NCBI chr10:2,129,949...2,165,381
Ensembl chr10:2,129,978...2,165,663 		JBrowse link
G Rtcb RNA 2',3'-cyclic phosphate and 5'-OH ligase acts_upstream_of_or_within ISO (PMID:20510672) RGD PMID:20510672 NCBI chr 7:17,907,668...17,927,136
Ensembl chr 7:17,907,705...17,927,132 		JBrowse link
G Rundc1 RUN domain containing 1 acts_upstream_of_or_within ISO MGI:5548750 (PMID:27996060) RGD PMID:27996060 NCBI chr10:86,361,635...86,375,446
Ensembl chr10:86,361,051...86,370,878 		JBrowse link
G Runx1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO MGI:3043614 (PMID:16174759) RGD PMID:16174759 NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542 		JBrowse link
G Rxra retinoid X receptor alpha acts_upstream_of_or_within ISO MGI:98215 (PMID:9892670) RGD PMID:9892670 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712 		JBrowse link
G Rxrb retinoid X receptor beta acts_upstream_of_or_within ISO MGI:98214 (PMID:9892670) RGD PMID:9892670 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773 		JBrowse link
G Sall4 spalt-like transcription factor 4 acts_upstream_of_or_within ISO MGI:3692447 (PMID:17060609) RGD PMID:17060609 NCBI chr 3:157,474,067...157,491,055
Ensembl chr 3:157,474,642...157,490,822 		JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component acts_upstream_of_or_within ISO MGI:4431706 (PMID:24876386) RGD PMID:24876386 NCBI chr15:3,602,460...3,624,524
Ensembl chr15:3,602,460...3,624,422 		JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component acts_upstream_of_or_within ISO MGI:4330860|MGI:4340594 (PMID:23596517), (PMID:24876386) RGD PMID:23596517 PMID:24876386 NCBI chr 2:211,418,557...211,526,588
Ensembl chr 2:211,418,623...211,526,587 		JBrowse link
G Sh3pxd2a SH3 and PX domains 2A acts_upstream_of_or_within ISO MGI:5636944 (PMID:27996060) RGD PMID:27996060 NCBI chr 1:246,153,660...246,359,806
Ensembl chr 1:246,160,502...246,360,166 		JBrowse link
G Sin3a SIN3 transcription regulator family member A acts_upstream_of_or_within ISO MGI:3583656 (PMID:15998811) RGD PMID:15998811 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192 		JBrowse link
G Slc25a20 solute carrier family 25 member 20 acts_upstream_of_or_within ISO MGI:4431570 (PMID:27996060) RGD PMID:27996060 NCBI chr 8:109,365,056...109,386,512
Ensembl chr 8:109,365,002...109,386,512 		JBrowse link
G Slc30a1 solute carrier family 30 member 1 acts_upstream_of_or_within ISO MGI:3056498 (PMID:15452870) RGD PMID:15452870 NCBI chr13:103,491,037...103,494,910
Ensembl chr13:103,491,037...103,494,910 		JBrowse link
G Slc34a2 solute carrier family 34 member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3841013 (PMID:19233126)		 Ensembl
RGD		 PMID:19233126 GO_REF:0000107 NCBI chr14:57,910,931...57,930,236
Ensembl chr14:57,910,480...57,930,436 		JBrowse link
G Slc39a1 solute carrier family 39 member 1 acts_upstream_of_or_within ISO MGI:2147269|MGI:3625131 (PMID:16652366) RGD PMID:16652366 NCBI chr 2:175,703,413...175,709,063
Ensembl chr 2:175,703,441...175,709,058 		JBrowse link
G Slc39a3 solute carrier family 39 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1353474 (PMID:16652366)		 Ensembl
RGD		 PMID:16652366 GO_REF:0000107 NCBI chr 7:8,676,845...8,682,846
Ensembl chr 7:8,676,759...8,685,149 		JBrowse link
G Slc5a7 solute carrier family 5 member 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4942035 (PMID:27996060)		 Ensembl
RGD		 PMID:27996060 GO_REF:0000107 NCBI chr 9:7,595,440...7,626,258
Ensembl chr 9:7,595,444...7,626,258 		JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:2179460 (PMID:18829537) RGD PMID:18829537 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO MGI:1201674|MGI:1857692 (PMID:15183723), (PMID:17849440) RGD PMID:15183723 PMID:17849440 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (PMID:15183723) RGD PMID:15183723 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858049 (PMID:9420335)		 Ensembl
RGD		 PMID:9420335 GO_REF:0000107 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2386105|MGI:3605892|MGI:3611933 (PMID:16287714), (PMID:23319608) RGD PMID:16287714 PMID:23319608 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5692712 (PMID:27996060)		 Ensembl
RGD		 PMID:27996060 GO_REF:0000107 NCBI chr 1:79,988,540...80,011,262
Ensembl chr 1:79,988,612...80,011,254 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176255 (PMID:17881493)		 Ensembl
RGD		 PMID:17881493 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 acts_upstream_of_or_within ISO MGI:5548688 (PMID:27996060) RGD PMID:27996060 NCBI chr11:83,362,534...83,386,257
Ensembl chr11:83,362,534...83,386,250 		JBrowse link
G Sox10 SRY-box transcription factor 10 acts_upstream_of_or_within ISO MGI:98370 (PMID:16790476) RGD PMID:16790476 NCBI chr 7:110,725,274...110,734,651
Ensembl chr 7:110,725,274...110,735,544 		JBrowse link
G Sox18 SRY-box transcription factor 18 acts_upstream_of_or_within
NOT|acts_upstream_of_or_within		 ISO MGI:1856135|MGI:1856136|MGI:2178809 (PMID:10742113), (PMID:18931657), (PMID:19429912)
MGI:2178809 (PMID:11094083)		 RGD PMID:10742113 PMID:11094083 PMID:18931657 PMID:19429912 NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290 		JBrowse link
G Sox5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO MGI:2447147 (PMID:17084361) RGD PMID:17084361 NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852 		JBrowse link
G Sox6 SRY-box transcription factor 6 acts_upstream_of_or_within ISO MGI:2447148 (PMID:17084361) RGD PMID:17084361 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386 		JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:98358 (PMID:16790476)		 UniProt
RGD		 PMID:16790476 GO_REF:0000024 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp2 Sp2 transcription factor acts_upstream_of_or_within ISO MGI:4441277 (PMID:20221402) RGD PMID:20221402 NCBI chr10:81,940,580...81,970,040
Ensembl chr10:81,940,587...81,970,548 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Speg striated muscle enriched protein kinase acts_upstream_of_or_within ISO MGI:4830540 (PMID:19118250) RGD PMID:19118250 NCBI chr 9:76,865,714...76,923,170
Ensembl chr 9:76,865,754...76,923,144 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2158696 (PMID:9799237) RGD PMID:9799237 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 acts_upstream_of_or_within ISO MGI:3530159 (PMID:15652482) RGD PMID:15652482 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336 		JBrowse link
G Ssr2 signal sequence receptor subunit 2 acts_upstream_of_or_within ISO MGI:5637009 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:174,048,291...174,057,043
Ensembl chr 2:174,048,460...174,057,042 		JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (PMID:10385121) RGD PMID:10385121 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
G Syf2 SYF2 pre-mRNA-splicing factor acts_upstream_of_or_within ISO MGI:3904866 (PMID:22448250) RGD PMID:22448250 NCBI chr 5:147,156,492...147,164,416
Ensembl chr 5:147,156,480...147,164,414 		JBrowse link
G Syvn1 synoviolin 1 acts_upstream_of_or_within ISO MGI:2679656 (PMID:15611074) RGD PMID:15611074 NCBI chr 1:203,339,235...203,346,137
Ensembl chr 1:203,339,619...203,346,152 		JBrowse link
G Tab1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 acts_upstream_of_or_within ISO MGI:2667182 (PMID:12464436) RGD PMID:12464436 NCBI chr 7:111,675,829...111,707,058
Ensembl chr 7:111,686,371...111,707,058 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in ISO MGI:3606185 (PMID:28893950) RGD PMID:28893950 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376 		JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4346764 (PMID:21068316)		 Ensembl
RGD		 PMID:21068316 GO_REF:0000107 NCBI chr10:90,553,124...90,873,477
Ensembl chr10:90,553,002...90,868,756 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:3710254 (PMID:17473172) RGD PMID:17473172 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:4431951 (PMID:27996060) RGD PMID:27996060 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO MGI:3716885 (PMID:16357211) RGD PMID:16357211 NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267 		JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO MGI:106907 (PMID:18083014) RGD PMID:18083014 NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323 		JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5637082 (PMID:27996060)		 Ensembl
RGD		 PMID:27996060 GO_REF:0000107 NCBI chr 2:187,853,026...187,875,260
Ensembl chr 2:187,853,024...187,894,744 		JBrowse link
G Terf2 telomeric repeat binding factor 2 acts_upstream_of_or_within ISO MGI:3619525 (PMID:15968270) RGD PMID:15968270 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 acts_upstream_of_or_within ISO MGI:2158731 (PMID:14729481) RGD PMID:14729481 NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:2386570|MGI:2388050 (PMID:11285230), (PMID:14729481), (PMID:17078885) RGD PMID:11285230 PMID:14729481 PMID:17078885 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2384513 (PMID:10030593), (PMID:18990706)		 Ensembl
RGD		 PMID:10030593 PMID:18990706 GO_REF:0000107 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO MGI:3818438 (PMID:17704211) RGD PMID:17704211 NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341 		JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 acts_upstream_of_or_within ISO MGI:108448 (PMID:11172728) RGD PMID:11172728 NCBI chr 5:132,000,013...132,019,658
Ensembl chr 5:132,000,015...132,019,592 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO MGI:4343479|MGI:4456438 (PMID:20178780) RGD PMID:20178780 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
G Tmem100 transmembrane protein 100 acts_upstream_of_or_within ISO MGI:4881485|MGI:5432904|MGI:5432905 (PMID:20848592), (PMID:22783020) RGD PMID:20848592 PMID:22783020 NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941 		JBrowse link
G Tmem231 transmembrane protein 231 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4284576 (PMID:22179047)		 Ensembl
RGD		 PMID:22179047 GO_REF:0000107 NCBI chr19:39,883,077...39,904,296
Ensembl chr19:39,883,077...39,904,269 		JBrowse link
G Tp53 tumor protein p53 involved_in
NOT|acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101816 (PMID:9425892)
MGI:101816|MGI:1343101|MGI:1924285 (PMID:17325035), (PMID:26334721), (PMID:9288110)		 Ensembl
RGD		 PMID:9288110 PMID:9425892 PMID:17325035 PMID:26334721 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tpm1 tropomyosin 1 acts_upstream_of_or_within ISO MGI:2387893 (PMID:9440710) RGD PMID:9440710 NCBI chr 8:67,635,479...67,662,330
Ensembl chr 8:67,635,479...67,662,802 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4840586 (PMID:27996060)		 Ensembl
RGD		 PMID:27996060 GO_REF:0000107 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507 		JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within ISO MGI:1928907 (PMID:22442485) RGD PMID:22442485 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO MGI:3810527 (PMID:18776146) RGD PMID:18776146 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874 		JBrowse link
G Ttn titin acts_upstream_of_or_within ISO MGI:3654306 (PMID:16702235) RGD PMID:16702235 NCBI chr 3:61,652,432...61,924,912
Ensembl chr 3:61,652,439...61,924,741 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:3038818 (PMID:15030764) RGD PMID:15030764 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Tymp thymidine phosphorylase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:120,438,768...120,444,088
Ensembl chr 7:120,438,770...120,443,874
Ensembl chr 7:120,438,770...120,443,874 		JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A acts_upstream_of_or_within
NOT|acts_upstream_of_or_within		 ISO MGI:102944 (PMID:15169909)
MGI:2450874 (PMID:15169909)		 RGD PMID:15169909 NCBI chr  X:116,114,339...116,125,076
Ensembl chr  X:116,113,875...116,125,070 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:102959 (PMID:15169909) RGD PMID:15169909 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Ubr3 ubiquitin protein ligase E3 component n-recognin 3 acts_upstream_of_or_within ISO MGI:3718505 (PMID:17462990) RGD PMID:17462990 NCBI chr 3:54,649,803...54,806,779
Ensembl chr 3:54,649,992...54,806,247 		JBrowse link
G Unk unk zinc finger acts_upstream_of_or_within ISO MGI:4880910 (PMID:27996060) RGD PMID:27996060 NCBI chr10:101,265,732...101,295,950
Ensembl chr10:101,265,703...101,295,967 		JBrowse link
G Upb1 beta-ureidopropionase 1 IEP RGD PMID:6870258 RGD:2317093 NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590 		JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay acts_upstream_of ISO MGI:6117430 (PMID:27040500) RGD PMID:27040500 NCBI chr16:75,757,442...75,768,478
Ensembl chr16:75,757,441...75,769,345 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked acts_upstream_of_or_within ISO MGI:95387 (PMID:23861879) RGD PMID:23861879 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO MGI:3877328 (PMID:22192413), (PMID:23028370) RGD PMID:22192413 PMID:23028370 NCBI chr  Y:942,838...1,105,313
Ensembl chr  Y:924,168...1,103,422 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931047 (PMID:10229225) RGD PMID:10229225 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO		 GO_REF:0000107
MGI:3613397 (PMID:16244655)		 Ensembl
RGD		 PMID:16244655 GO_REF:0000107 NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within ISO MGI:5315747|MGI:5315748 (PMID:22228095) RGD PMID:22228095 NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288 		JBrowse link
G Wdtc1 WD and tetratricopeptide repeats 1 acts_upstream_of_or_within ISO MGI:3774270 (PMID:17767906) RGD PMID:17767906 NCBI chr 5:145,491,460...145,559,631
Ensembl chr 5:145,491,466...145,540,408 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857088 (PMID:4819561) RGD PMID:4819561 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (PMID:18367557) RGD PMID:18367557 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:16054034) RGD PMID:16054034 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO MGI:3654106 (PMID:16777961) RGD PMID:16777961 NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771 (PMID:9875844) RGD PMID:9875844 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2137670|MGI:3581780 (PMID:16954378)		 Ensembl
RGD		 PMID:16954378 GO_REF:0000107 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
G Ybx3 Y box binding protein 3 acts_upstream_of_or_within ISO MGI:99146 (PMID:16954378) RGD PMID:16954378 NCBI chr 4:165,129,747...165,153,101
Ensembl chr 4:165,129,758...165,153,161 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:6194737 (PMID:29799838)		 Ensembl
RGD		 PMID:29799838 GO_REF:0000107 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028 		JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (PMID:19409883) RGD PMID:19409883 NCBI chr13:89,439,501...89,447,958
Ensembl chr13:89,439,420...89,448,862 		JBrowse link
G Zfand5 zinc finger AN1-type containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3526860 (PMID:17143286)		 Ensembl
RGD		 PMID:17143286 GO_REF:0000107 NCBI chr 1:218,765,735...218,780,391
Ensembl chr 1:218,766,614...218,775,843 		JBrowse link
G Zfp335 zinc finger protein 335 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3857418|MGI:4125700 (PMID:23178126)		 Ensembl
RGD		 PMID:23178126 GO_REF:0000107 NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054 		JBrowse link
G Zfp42 zinc finger protein 42 acts_upstream_of_or_within ISO MGI:99187 (PMID:21233130) RGD PMID:21233130 NCBI chr16:48,836,463...48,845,443
Ensembl chr16:48,836,648...48,845,401 		JBrowse link
G Zfp568 zinc finger protein 568 involved_in ISO (MGI:5908476|PMID:28522536) RGD PMID:28522536 MGI:5908476 NCBI chr 1:85,206,643...85,257,759
Ensembl chr 1:85,207,579...85,257,505 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 acts_upstream_of_or_within ISO MGI:3587413 (PMID:16103912) RGD PMID:16103912 NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205 		JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 acts_upstream_of_or_within ISO MGI:3769389 (PMID:17967885) RGD PMID:17967885 NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597 		JBrowse link
ingression involved in gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (MGI:5823085|PMID:27870829) RGD PMID:27870829 MGI:5823085 NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294 		JBrowse link
inhibition of neuroepithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1932522|MGI:3044907 (PMID:16495313)		 Ensembl
RGD		 PMID:16495313 GO_REF:0000107 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2149672 (PMID:10952889) RGD PMID:10952889 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15064243)		 Ensembl
RGD		 PMID:15064243 GO_REF:0000107 NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2180793 (PMID:16678814) RGD PMID:16678814 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (PMID:15064243) RGD PMID:15064243 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
initiation of neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
inner cell mass cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO (PMID:24036311) RGD PMID:24036311 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303 		JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857856 (PMID:10518496)		 Ensembl
RGD		 PMID:10518496 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Nle1 notchless homolog 1 acts_upstream_of_or_within ISO MGI:3624778 (PMID:16611995) RGD PMID:16611995 NCBI chr10:67,834,059...67,844,771
Ensembl chr10:67,834,062...67,842,658 		JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:3844762|PMID:19372391)
(PMID:20639862), (PMID:21295276)		 RGD PMID:19372391 PMID:20639862 PMID:21295276 MGI:3844762 NCBI chr20:25,761,042...25,840,926
Ensembl chr20:25,768,120...25,833,052 		JBrowse link
inner cell mass cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 acts_upstream_of_or_within ISO MGI:1354386 (PMID:23824537) RGD PMID:23824537 NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640 		JBrowse link
G Lats2 large tumor suppressor kinase 2 acts_upstream_of_or_within ISO MGI:1333883 (PMID:23824537) RGD PMID:23824537 NCBI chr15:31,825,068...31,877,193
Ensembl chr15:31,825,092...31,877,220 		JBrowse link
G Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO (PMID:24183668) RGD PMID:24183668 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712 		JBrowse link
inner cell mass cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1930617 (PMID:9171369)		 Ensembl
RGD		 PMID:9171369 GO_REF:0000107 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Brd4 bromodomain containing 4 acts_upstream_of_or_within ISO MGI:2674141 (PMID:11997514) RGD PMID:11997514 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539 		JBrowse link
G Chek1 checkpoint kinase 1 acts_upstream_of_or_within ISO MGI:1928818 (PMID:10859163) RGD PMID:10859163 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Cops2 COP9 signalosome subunit 2 acts_upstream_of_or_within ISO MGI:2678281 (PMID:12972599) RGD PMID:12972599 NCBI chr 3:113,084,174...113,110,090
Ensembl chr 3:113,084,176...113,109,947 		JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 acts_upstream_of_or_within ISO (PMID:15452149) RGD PMID:15452149 NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478 		JBrowse link
G Gins1 GINS complex subunit 1 acts_upstream_of_or_within ISO MGI:3706309 (PMID:16287864) RGD PMID:16287864 NCBI chr 3:139,724,513...139,745,930
Ensembl chr 3:139,724,490...139,745,936 		JBrowse link
G Gins4 GINS complex subunit 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5575557 (PMID:24244394)		 Ensembl
RGD		 PMID:24244394 GO_REF:0000107 NCBI chr16:68,787,572...68,799,938
Ensembl chr16:68,767,339...68,802,273 		JBrowse link
G Ints1 integrator complex subunit 1 acts_upstream_of_or_within ISO MGI:3663683 (PMID:17544522) RGD PMID:17544522 NCBI chr12:14,861,312...14,886,048
Ensembl chr12:14,861,318...14,886,037 		JBrowse link
G Ncapg2 non-SMC condensin II complex, subunit G2 acts_upstream_of_or_within ISO MGI:3039486 (PMID:14729962) RGD PMID:14729962 NCBI chr 6:137,342,449...137,418,083
Ensembl chr 6:137,342,943...137,415,159 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3589467 (PMID:16107726)		 Ensembl
RGD		 PMID:16107726 GO_REF:0000107 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907 		JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO MGI:3801303 (PMID:20484223) RGD PMID:20484223 NCBI chr 1:176,665,076...176,689,053
Ensembl chr 1:176,665,076...176,688,990 		JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor acts_upstream_of_or_within ISO MGI:2450933 (PMID:12556505) RGD PMID:12556505 NCBI chr 2:46,797,853...46,799,621
Ensembl chr 2:46,797,853...46,799,746 		JBrowse link
G Sall4 spalt-like transcription factor 4 acts_upstream_of_or_within ISO MGI:3699175 (PMID:16790473) RGD PMID:16790473 NCBI chr 3:157,474,067...157,491,055
Ensembl chr 3:157,474,642...157,490,822 		JBrowse link
G Sbds Sbds, ribosome maturation factor acts_upstream_of_or_within ISO MGI:3664792 (PMID:16914746) RGD PMID:16914746 NCBI chr12:26,420,410...26,429,650
Ensembl chr12:26,420,414...26,429,649 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 acts_upstream_of_or_within ISO MGI:3040431 (PMID:14993285) RGD PMID:14993285 NCBI chr 2:182,898,738...182,930,283
Ensembl chr 2:182,898,738...182,930,506 		JBrowse link
G Taf8 TATA-box binding protein associated factor 8 acts_upstream_of_or_within ISO MGI:3033758 (PMID:11076765) RGD PMID:11076765 NCBI chr 9:13,491,892...13,511,713
Ensembl chr 9:13,491,937...13,511,717 		JBrowse link
G Zpr1 ZPR1 zinc finger involved_in ISO (MGI:3575865|PMID:15767679) RGD PMID:15767679 MGI:3575865 NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719 		JBrowse link
inner cell mass cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 acts_upstream_of_or_within ISO MGI:1354386 (PMID:23824537) RGD PMID:23824537 NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640 		JBrowse link
G Lats2 large tumor suppressor kinase 2 acts_upstream_of_or_within ISO MGI:1333883 (PMID:23824537) RGD PMID:23824537 NCBI chr15:31,825,068...31,877,193
Ensembl chr15:31,825,092...31,877,220 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:3717121 (PMID:21146513) RGD PMID:21146513 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
inner ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:88141 (PMID:11921339) RGD PMID:11921339 NCBI chr10:61,262,516...61,461,331
Ensembl chr10:61,262,516...61,461,505 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3043947 (PMID:23536097)		 Ensembl
RGD		 PMID:23536097 GO_REF:0000107 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983|MGI:2155984 (PMID:15543141), (PMID:16145671) RGD PMID:15543141 PMID:16145671 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (PMID:9668038) RGD PMID:9668038 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in
NOT|involved_in		 ISS
ISO		 GO_REF:0000024
(MGI:2669353|PMID:12782355)
(PMID:19639346)		 UniProt
RGD		 PMID:12782355 PMID:19639346 GO_REF:0000024 MGI:2669353 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475 		JBrowse link
G Atp8a2 ATPase phospholipid transporting 8A2 involved_in ISO (MGI:5574432|PMID:24413176) RGD PMID:24413176 MGI:5574432 NCBI chr15:33,817,309...34,350,193
Ensembl chr15:33,819,755...34,350,223 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:107771 (PMID:11921339) RGD PMID:11921339 NCBI chr20:13,469,325...13,596,942
Ensembl chr20:13,471,668...13,597,016 		JBrowse link
G Cdh23 cadherin-related 23 acts_upstream_of_or_within ISO MGI:1856229|MGI:1856681|MGI:2665714 (PMID:15925194), (PMID:7610888) RGD PMID:7610888 PMID:15925194 MGI:61210 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419 		JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO MGI:1862019|MGI:2668337 (PMID:12842012) RGD PMID:12842012 NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:15300250)
MGI:3511552 (PMID:15353999)
GO_REF:0000033		 RGD
GO_Central		 PMID:15300250 PMID:15353999 GO_REF:0000033 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Chrna10 cholinergic receptor nicotinic alpha 10 subunit acts_upstream_of_or_within ISO MGI:3774038 (PMID:18077337) RGD PMID:18077337 NCBI chr 1:156,487,279...156,494,277
Ensembl chr 1:156,487,279...156,491,476 		JBrowse link
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158742 (PMID:18077337)		 Ensembl
RGD		 PMID:18077337 GO_REF:0000107 NCBI chr14:42,235,218...42,241,939
Ensembl chr14:42,235,226...42,242,192 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (PMID:1952599) RGD PMID:1952599 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857275 (PMID:9165353)		 Ensembl
RGD		 PMID:9165353 GO_REF:0000107 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101927|MGI:2180474 (PMID:12142028), (PMID:16900517)		 Ensembl
RGD		 PMID:12142028 PMID:16900517 GO_REF:0000107 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within ISO MGI:101926 (PMID:16900517) RGD PMID:16900517 NCBI chr 4:34,984,264...34,989,926
Ensembl chr 4:34,984,232...34,991,343 		JBrowse link
G Efna2 ephrin A2 TAS RGD PMID:10792438 RGD:1300471 NCBI chr 7:9,515,635...9,528,071
Ensembl chr 7:9,516,429...9,527,061 		JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:1859095|PMID:10839360) RGD PMID:10839360 MGI:1859095 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1857803|MGI:2150426|MGI:97486 (PMID:10471511), (PMID:15817220), (PMID:16916509) RGD PMID:10471511 PMID:15817220 PMID:16916509 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1347464|MGI:1859647 (PMID:11062007), (PMID:16691564) RGD PMID:11062007 PMID:16691564 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1345138 (PMID:15809037) RGD PMID:15809037 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (PMID:15328018) RGD PMID:15328018 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:2153351 (PMID:12194867) RGD PMID:12194867 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811 (PMID:10934262) RGD PMID:10934262 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO MGI:1099809|MGI:2388671 (PMID:16691564) RGD PMID:16691564 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607 		JBrowse link
G Foxi1 forkhead box I1 acts_upstream_of_or_within ISO MGI:2448634 (PMID:12642503) RGD PMID:12642503 NCBI chr10:18,806,292...18,810,231
Ensembl chr10:18,806,308...18,810,231 		JBrowse link
G Frzb frizzled-related protein acts_upstream_of_or_within ISO MGI:98958 (PMID:18991062) RGD PMID:18991062 NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208 		JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO MGI:108474 (PMID:16495441) RGD PMID:16495441 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369 		JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO MGI:108476 (PMID:16495441) RGD PMID:16495441 NCBI chr 7:70,055,012...70,086,781
Ensembl chr 7:70,055,068...70,086,776 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:4818492 (PMID:20652952) RGD PMID:20652952 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:2153826|MGI:2181200 (PMID:11135239), (PMID:21553382) RGD PMID:11135239 PMID:21553382 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:15829521), (PMID:15996652) RGD PMID:15829521 PMID:15996652 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor acts_upstream_of_or_within ISO MGI:2449921 (PMID:12441305) RGD PMID:12441305 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814 		JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO MGI:107160|MGI:2154542 (PMID:11748138), (PMID:15363417) RGD PMID:11748138 PMID:15363417 NCBI chr 1:186,319,110...186,326,771
Ensembl chr 1:186,319,110...186,326,771 		JBrowse link
G Hmx3 H6 family homeobox 3 acts_upstream_of_or_within ISO MGI:107159|MGI:1857577 (PMID:15363417), (PMID:9435283) RGD PMID:9435283 PMID:15363417 NCBI chr 1:186,313,237...186,315,201
Ensembl chr 1:186,313,063...186,315,201 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:3056069 (PMID:15367676) RGD PMID:15367676 NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (PMID:16955138) RGD PMID:16955138 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952 		JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1916289 (PMID:16955138)		 Ensembl
RGD		 PMID:16955138 GO_REF:0000107 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923 		JBrowse link
G Itga8 integrin subunit alpha 8 acts_upstream_of_or_within ISO MGI:2181699 (PMID:10742111) RGD PMID:10742111 NCBI chr17:75,304,004...75,501,510
Ensembl chr17:75,304,008...75,501,510 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:2680653 (PMID:11226272)		 Ensembl
RGD		 PMID:11226272 GO_REF:0000107 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
G Kcnq4 potassium voltage-gated channel subfamily Q member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3618993 (PMID:16437162)		 Ensembl
RGD		 PMID:16437162 GO_REF:0000107 NCBI chr 5:134,275,145...134,326,992
Ensembl chr 5:134,275,934...134,326,932 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (PMID:16325169) RGD PMID:16325169 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031 		JBrowse link
G Myo15a myosin XVA acts_upstream_of_or_within ISO MGI:1857036 (PMID:11718241), (PMID:14724386) RGD PMID:11718241 PMID:14724386 NCBI chr10:45,277,619...45,335,953
Ensembl chr10:45,278,737...45,335,340 		JBrowse link
G Myo6 myosin VI involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1856555 (PMID:7493015)		 GO_Central
RGD		 PMID:7493015 GO_REF:0000033 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292 		JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1856716|MGI:1860092|MGI:2155422|MGI:3511858 (PMID:11753415), (PMID:15389316), (PMID:5795329) RGD PMID:5795329 PMID:11753415 PMID:15389316 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Neurog1 neurogenin 1 involved_in
acts_upstream_of_or_within		 ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067)
MGI:2183171 (PMID:16145671)		 RGD PMID:16145671 PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (PMID:11784868) RGD PMID:11784868 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733 		JBrowse link
G Ntn1 netrin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2137018 (PMID:17616930)		 Ensembl
RGD		 PMID:17616930 GO_REF:0000107 NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326 		JBrowse link
G Otop1 otopetrin 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1856638|MGI:2655558 (PMID:12651873)		 GO_Central
RGD		 PMID:12651873 GO_REF:0000033 NCBI chr14:72,505,036...72,532,497
Ensembl chr14:72,503,592...72,532,497 		JBrowse link
G Otx1 orthodenticle homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2136272|MGI:97451 (PMID:10225993)		 Ensembl
RGD		 PMID:10225993 GO_REF:0000107 NCBI chr14:96,082,146...96,089,161
Ensembl chr14:96,082,151...96,089,086 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:97450 (PMID:10225993) RGD PMID:10225993 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:109344|MGI:1857673 (PMID:15242798), (PMID:16916509)
UniProtKB:Q00288 (MGI:4822275|PMID:20727173), (MGI:84247|PMID:8951055)		 UniProt
RGD		 PMID:8951055 PMID:15242798 PMID:16916509 PMID:20727173 GO_REF:0000024 MGI:4822275 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISO UniProtKB:P32114 (MGI:4822275|PMID:20727173) RGD PMID:20727173 MGI:4822275 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Pou4f3 POU class 4 homeobox 3 acts_upstream_of_or_within ISO MGI:1857425 (PMID:12585968) RGD PMID:12585968 NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:98218 (PMID:9729491) RGD PMID:9729491 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (PMID:9729491) RGD PMID:9729491 NCBI chr 3:14,132,574...14,168,533
Ensembl chr 3:14,094,004...14,168,535 		JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q acts_upstream_of_or_within ISO MGI:2679316 (PMID:14534255) RGD PMID:14534255 NCBI chr 7:42,834,455...43,016,807
Ensembl chr 7:42,837,109...43,016,917 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2183225 (PMID:18606138) RGD PMID:18606138 NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:106034 (PMID:15788460) RGD PMID:15788460 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (PMID:15788460) RGD PMID:15788460 NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (PMID:19936227) RGD PMID:19936227 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393 		JBrowse link
G Sobp sine oculis binding protein homolog involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000118
MGI:1856614 (PMID:16962269)
GO_REF:0000033		 TreeGrafter
RGD
GO_Central		 PMID:16962269 GO_REF:0000033 GO_REF:0000118 NCBI chr20:46,482,265...46,661,452
Ensembl chr20:46,482,765...46,663,541 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2447995 (PMID:15846349) RGD PMID:15846349 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO MGI:3578633|MGI:99604 (PMID:15809037) RGD PMID:15809037 NCBI chr15:82,692,291...82,697,408
Ensembl chr15:82,692,143...82,698,009 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2179136|MGI:2179190|MGI:2179191|MGI:3046196|MGI:3619149 (PMID:12913075), (PMID:15084464), (PMID:15652707), (PMID:16600992)		 UniProt
RGD		 PMID:12913075 PMID:15084464 PMID:15652707 PMID:16600992 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO UniProtKB:Q60707 (MGI:6710296|PMID:33795231) RGD PMID:33795231 MGI:6710296 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:21204207)		 UniProt
RGD		 PMID:21204207 GO_REF:0000024 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592 		JBrowse link
G Tmie transmembrane inner ear involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857053 (PMID:12140191)		 GO_Central
RGD		 PMID:12140191 GO_REF:0000033 NCBI chr 8:110,849,713...110,864,803
Ensembl chr 8:110,850,034...110,864,803 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2651858|MGI:2651859 (PMID:14519688)		 GO_Central
RGD		 PMID:14519688 GO_REF:0000033 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671 		JBrowse link
G Ush1g USH1 protein network component sans acts_upstream_of_or_within ISO MGI:2450561 (PMID:12588793), (PMID:1927362) RGD PMID:1927362 PMID:12588793 NCBI chr10:100,559,721...100,563,590
Ensembl chr10:100,557,629...100,563,590 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:98956 (PMID:15961523) RGD PMID:15961523 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:98953 (PMID:15961523) RGD PMID:15961523 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (PMID:18991062) RGD PMID:18991062 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
intermediate mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO
ISS
IEA		 (PMID:10021330)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:10021330 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
labyrinthine layer blood vessel development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2675202 (PMID:12783884)		 Ensembl
RGD		 PMID:12783884 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO MGI:2446577 (PMID:12446788) RGD PMID:12446788 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484 		JBrowse link
G Esx1 ESX homeobox 1 acts_upstream_of_or_within ISO MGI:2153820 (PMID:9806555) RGD PMID:9806555 NCBI chr  X:100,449,298...100,454,452 JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3665136 (PMID:16880526)		 Ensembl
RGD		 PMID:16880526 GO_REF:0000107 NCBI chr12:38,426,466...38,517,076
Ensembl chr12:38,426,444...38,516,424 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2177951 (PMID:11092808)		 Ensembl
RGD		 PMID:11092808 GO_REF:0000107 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Ggnbp2 gametogenetin binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4072637 (PMID:26764350)		 Ensembl
RGD		 PMID:26764350 GO_REF:0000107 NCBI chr10:69,711,527...69,743,134
Ensembl chr10:69,711,532...69,743,365 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4453944|PMID:20122914)		 Ensembl
RGD		 PMID:20122914 GO_REF:0000107 MGI:4453944 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO UniProtKB:Q9QUS4 (MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:3040159 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO UniProtKB:Q9WV93 (MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:3040159 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:3715259 (PMID:17405882) RGD PMID:17405882 NCBI chr 9:38,283,502...38,322,684
Ensembl chr 9:38,282,395...38,322,683 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2153821 (PMID:10022836) RGD PMID:10022836 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035 		JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO MGI:4331862 (PMID:21606200) RGD PMID:21606200 NCBI chr10:101,050,978...101,086,527
Ensembl chr10:101,051,408...101,086,525 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3055889 (PMID:14622137)		 Ensembl
RGD		 PMID:14622137 GO_REF:0000107 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO MGI:2445463|MGI:2450859 (PMID:12368298), (PMID:12556486) RGD PMID:12368298 PMID:12556486 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268 		JBrowse link
G Nfe2 nuclear factor, erythroid 2 acts_upstream_of_or_within ISO MGI:1857224 (PMID:21558372) RGD PMID:21558372 NCBI chr 7:134,382,758...134,395,364
Ensembl chr 7:134,382,761...134,390,108 		JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like acts_upstream_of_or_within ISO MGI:1862021 (PMID:17028112) RGD PMID:17028112 NCBI chr  X:150,775,034...150,807,161
Ensembl chr  X:150,775,080...150,807,142 		JBrowse link
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3777011 (PMID:17573777) RGD PMID:17573777 NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359 		JBrowse link
G Plcd1 phospholipase C, delta 1 acts_upstream_of_or_within ISO MGI:107451 (PMID:16314520) RGD PMID:16314520 NCBI chr 8:118,795,196...118,818,186
Ensembl chr 8:118,795,201...118,818,186 		JBrowse link
G Plcd3 phospholipase C, delta 3 acts_upstream_of_or_within ISO MGI:97614 (PMID:16314520) RGD PMID:16314520 NCBI chr10:88,026,707...88,048,080
Ensembl chr10:88,026,740...88,048,296 		JBrowse link
G Plg plasminogen involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857291 (PMID:12900459)		 Ensembl
RGD		 PMID:12900459 GO_REF:0000107 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353 		JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO MGI:5905625 (PMID:27917469) RGD PMID:27917469 NCBI chr 7:11,032,931...11,038,917
Ensembl chr 7:11,032,898...11,039,869 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in ISO
IEA		 (MGI:4453264|PMID:20178780)
GO_REF:0000107		 RGD
Ensembl		 PMID:20178780 GO_REF:0000107 MGI:4453264 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
G Vash1 vasohibin 1 acts_upstream_of_or_within ISO MGI:3846783 (PMID:25184477) RGD PMID:25184477 NCBI chr 6:106,330,374...106,345,740
Ensembl chr 6:106,329,123...106,345,726 		JBrowse link
G Vash2 vasohibin 2 acts_upstream_of_or_within ISO MGI:3846784 (PMID:25184477) RGD PMID:25184477 NCBI chr13:102,529,718...102,561,204
Ensembl chr13:102,529,719...102,560,391 		JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO MGI:2177935 (PMID:8951051) RGD PMID:8951051 NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402 		JBrowse link
labyrinthine layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc6 baculoviral IAP repeat-containing 6 acts_upstream_of_or_within ISO MGI:3512417 (PMID:15485903) RGD PMID:15485903 NCBI chr 6:20,722,922...20,916,396
Ensembl chr 6:20,722,922...20,916,434 		JBrowse link
G Cdx2 caudal type homeo box 2 acts_upstream_of_or_within ISO MGI:88362 (PMID:19853565) RGD PMID:19853565 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142 		JBrowse link
G Cdx4 caudal type homeo box 4 acts_upstream_of_or_within ISO MGI:88361 (PMID:19853565) RGD PMID:19853565 NCBI chr  X:68,326,874...68,335,461
Ensembl chr  X:68,326,874...68,335,461 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 acts_upstream_of_or_within ISO MGI:3028946 (PMID:14673158) RGD PMID:14673158 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162 		JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3690045 (PMID:16966370)		 Ensembl
RGD		 PMID:16966370 GO_REF:0000107 NCBI chr19:52,867,900...52,907,308
Ensembl chr19:52,869,486...52,907,777 		JBrowse link
G Ervfrd-1 endogenous retrovirus group FRD member 1, envelope acts_upstream_of_or_within ISO MGI:3852417 (PMID:19564597) RGD PMID:19564597 NCBI chr12:22,151,211...22,158,264
Ensembl chr12:22,151,211...22,158,264 		JBrowse link
G Gab1 GRB2-associated binding protein 1 acts_upstream_of_or_within ISO MGI:1926435 (PMID:10779359) RGD PMID:10779359 NCBI chr19:27,131,262...27,239,236
Ensembl chr19:27,131,262...27,239,236 		JBrowse link
G Ggnbp2 gametogenetin binding protein 2 acts_upstream_of_or_within ISO MGI:4072637 (PMID:26764350) RGD PMID:26764350 NCBI chr10:69,711,527...69,743,134
Ensembl chr10:69,711,532...69,743,365 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2178132 (PMID:10209122)		 Ensembl
RGD		 PMID:10209122 GO_REF:0000107 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Mir127 microRNA 127 acts_upstream_of_or_within ISO MGI:5789789 (PMID:26138477) RGD PMID:26138477 NCBI chr 6:128,546,215...128,546,311
Ensembl chr 6:128,546,215...128,546,311 		JBrowse link
G Pcdh12 protocadherin 12 acts_upstream_of_or_within ISO MGI:3512625 (PMID:18477666) RGD PMID:18477666 NCBI chr18:30,103,728...30,119,307
Ensembl chr18:30,103,728...30,119,307 		JBrowse link
G Rtl1 retrotransposon-like 1 acts_upstream_of_or_within ISO MGI:3776873 (PMID:26138477), (PMID:28111885) RGD PMID:26138477 PMID:28111885 NCBI chr 6:128,543,904...128,549,384
Ensembl chr 6:128,543,939...128,549,182 		JBrowse link
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO MGI:3832730 (PMID:19090619) RGD PMID:19090619 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238 		JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO MGI:5905625 (PMID:27917469) RGD PMID:27917469 NCBI chr 7:11,032,931...11,038,917
Ensembl chr 7:11,032,898...11,039,869 		JBrowse link
G Vash2 vasohibin 2 acts_upstream_of_or_within ISO MGI:3846784 (PMID:25184477) RGD PMID:25184477 NCBI chr13:102,529,718...102,561,204
Ensembl chr13:102,529,719...102,560,391 		JBrowse link
labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esx1 ESX homeobox 1 acts_upstream_of_or_within ISO MGI:2153820 (PMID:9806555) RGD PMID:9806555 NCBI chr  X:100,449,298...100,454,452 JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within ISO MGI:3769388 (PMID:17961533) RGD PMID:17961533 NCBI chr 5:139,680,670...139,683,588
Ensembl chr 5:139,680,671...139,683,583 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 acts_upstream_of_or_within ISO MGI:1276535 (PMID:20685850) RGD PMID:20685850 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO MGI:1276523 (PMID:20685850) RGD PMID:20685850 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594 		JBrowse link
lateral mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1929432 (PMID:11124112) RGD PMID:11124112 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in ISO MGI:3606185 (PMID:28893950) RGD PMID:28893950 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376 		JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within ISO MGI:3521833 (PMID:15569927) RGD PMID:15569927 NCBI chr 7:52,711,255...52,792,738
Ensembl chr 7:52,711,257...52,792,743 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:3836138|PMID:11850194) RGD PMID:11850194 MGI:3836138 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2148567|MGI:2148569 (PMID:19686689), (PMID:19805295)		 Ensembl
RGD		 PMID:19686689 PMID:19805295 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO MGI:1261834 (PMID:19686689) RGD PMID:19686689 NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402 		JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO MGI:98954 (PMID:19686689) RGD PMID:19686689 NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308 		JBrowse link
mammary gland bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (PMID:11782400) RGD PMID:11782400 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811 (PMID:11782400) RGD PMID:11782400 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO MGI:1931734|MGI:3696672 (PMID:10479450), (PMID:17117439) RGD PMID:10479450 PMID:17117439 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Ahdc1 AT hook, DNA binding motif, containing 1 involved_in ISO (PMID:35585237)
(MGI:7294317|PMID:35585237)		 RGD PMID:35585237 MGI:7294317 NCBI chr 5:145,228,228...145,294,170
Ensembl chr 5:145,228,227...145,294,145 		JBrowse link
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within ISO MGI:6157645 (PMID:28911199) RGD PMID:28911199 NCBI chr 1:182,820,141...182,826,913
Ensembl chr 1:182,820,141...182,826,907 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:18462699), (PMID:7799920) RGD PMID:7799920 PMID:18462699 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:2137520 (PMID:15843411) RGD PMID:15843411 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158342 (PMID:17699604) RGD PMID:17699604 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 acts_upstream_of_or_within ISO MGI:2158503 (PMID:10772805) RGD PMID:10772805 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Chrd chordin acts_upstream_of_or_within ISO MGI:2157350 (PMID:12810603) RGD PMID:12810603 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5296388|PMID:22072575), (MGI:5823085|PMID:27870829)		 CAFA
RGD		 PMID:22072575 PMID:27870829 GO_REF:0000024 MGI:5296388 MGI:5823085 NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Ecsit ECSIT signaling integrator acts_upstream_of_or_within ISO MGI:2683025 (PMID:14633973) RGD PMID:14633973 NCBI chr 8:20,605,583...20,618,453
Ensembl chr 8:20,605,583...20,618,390 		JBrowse link
G Eomes eomesodermin involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2182814 (PMID:10716450)		 GO_Central
RGD		 PMID:10716450 GO_REF:0000033 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO (PMID:18462699) RGD PMID:18462699 NCBI chr 1:85,890,562...85,894,025
Ensembl chr 1:85,890,559...85,893,431 		JBrowse link
G Ext2 exostosin glycosyltransferase 2 acts_upstream_of_or_within ISO MGI:3608690 (PMID:16236767) RGD PMID:16236767 NCBI chr 3:79,665,414...79,798,077
Ensembl chr 3:79,665,415...79,798,059 		JBrowse link
G Gpi glucose-6-phosphate isomerase acts_upstream_of_or_within ISO MGI:2177275 (PMID:8922529) RGD PMID:8922529 NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO MGI:2153824 (PMID:9500550) RGD PMID:9500550 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Inhba inhibin subunit beta A acts_upstream_of_or_within ISO (PMID:7799920) RGD PMID:7799920 NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982 		JBrowse link
G Macf1 microtubule-actin crosslinking factor 1 acts_upstream_of_or_within ISO MGI:3652899 (PMID:16815997) RGD PMID:16815997 NCBI chr 5:135,623,734...135,949,097
Ensembl chr 5:135,623,742...135,945,905 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,756,601...133,759,207
Ensembl chr 1:133,756,601...133,759,198 		JBrowse link
G Msgn1 mesogenin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:33,912,787...33,913,427
Ensembl chr 6:33,912,787...33,913,427 		JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857941 (PMID:9171370)		 Ensembl
RGD		 PMID:9171370 GO_REF:0000107 NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163) RGD PMID:11311163 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18462699)		 Ensembl
RGD		 PMID:18462699 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3043761 (PMID:13129926) RGD PMID:13129926 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733 		JBrowse link
G Pofut2 protein O-fucosyltransferase 2 acts_upstream_of_or_within ISO MGI:3604508|MGI:4127173 (PMID:20637190) RGD PMID:20637190 NCBI chr20:11,367,073...11,377,788
Ensembl chr20:11,367,096...11,377,743 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97592 (PMID:12004056)		 Ensembl
RGD		 PMID:12004056 GO_REF:0000107 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430 		JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha acts_upstream_of_or_within ISO MGI:2183602 (PMID:12004056) RGD PMID:12004056 NCBI chr10:94,621,042...94,639,534
Ensembl chr10:94,620,039...94,639,041 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:1343990|PMID:10477299) RGD PMID:10477299 MGI:1343990 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626 		JBrowse link
G Smad2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857691 (PMID:15084457)		 UniProt
RGD		 PMID:15084457 GO_REF:0000024 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:1857696 (PMID:15084457) RGD PMID:15084457 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (MGI:2153695|PMID:11689706) RGD PMID:11689706 MGI:2153695 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2158696 (PMID:11060034), (PMID:9799237) RGD PMID:9799237 PMID:11060034 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Tbx19 T-box transcription factor 19 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr13:77,450,848...77,484,475
Ensembl chr13:77,450,849...77,504,163 		JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within ISO MGI:2447721|MGI:3578143 (PMID:15755804), (PMID:9490412) RGD PMID:9490412 PMID:15755804 NCBI chr 1:181,387,851...181,392,762
Ensembl chr 1:181,388,684...181,392,593 		JBrowse link
G Tbxt T-box transcription factor T involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
G Tlx2 T-cell leukemia homeobox 2 acts_upstream_of_or_within ISO MGI:1857514 (PMID:9550720) RGD PMID:9550720 NCBI chr 4:115,573,736...115,576,097
Ensembl chr 4:115,573,799...115,575,642 		JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within ISO MGI:103302 (PMID:15843411) RGD PMID:15843411 NCBI chr 9:105,533,116...105,567,460
Ensembl chr 9:105,533,136...105,567,479 		JBrowse link
G Txnrd1 thioredoxin reductase 1 acts_upstream_of_or_within ISO MGI:3722092 (PMID:17697936) RGD PMID:17697936 NCBI chr 7:20,830,042...20,914,990
Ensembl chr 7:20,830,045...20,907,863 		JBrowse link
G Wls Wnt ligand secretion mediator involved_in ISO (MGI:4397730|PMID:19841259) RGD PMID:19841259 MGI:4397730 NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298 		JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2178826 (PMID:10431240) RGD PMID:10431240 NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
mesoderm migration involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apela apelin receptor early endogenous ligand involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr16:24,694,356...24,703,466
Ensembl chr16:24,694,324...24,703,465 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (PMID:18794329) RGD PMID:18794329 NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:1857760 (PMID:7720590) RGD PMID:7720590 NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:7799920) RGD PMID:7799920 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 IEP RGD PMID:7803853 RGD:632663 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1929432|MGI:88180 (PMID:17881493) RGD PMID:17881493 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS		 (PMID:17624332)
GO_REF:0000024		 RGD
UniProt		 PMID:17624332 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Inhba inhibin subunit beta A acts_upstream_of_or_within ISO (PMID:7799920) RGD PMID:7799920 NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982 		JBrowse link
G Itga2 integrin subunit alpha 2 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481 		JBrowse link
G Itga3 integrin subunit alpha 3 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr10:79,990,160...80,022,206
Ensembl chr10:79,990,161...80,022,118 		JBrowse link
G Itga8 integrin subunit alpha 8 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr17:75,304,004...75,501,510
Ensembl chr17:75,304,008...75,501,510 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Itgb3 integrin subunit beta 3 involved_in ISO
IEA		 (PMID:23154389)
GO_REF:0000107		 RGD
Ensembl		 PMID:23154389 GO_REF:0000107 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679 		JBrowse link
G Itgb4 integrin subunit beta 4 involved_in ISO
IEA		 (PMID:23154389)
GO_REF:0000107		 RGD
Ensembl		 PMID:23154389 GO_REF:0000107 NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012 		JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within ISO MGI:5448754|MGI:5448825 (PMID:22949634) RGD PMID:22949634 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062 		JBrowse link
G Kdm6b lysine demethylase 6B involved_in ISO (MGI:5574281|PMID:23856522) RGD PMID:23856522 MGI:5574281 NCBI chr10:54,120,716...54,142,212
Ensembl chr10:54,121,848...54,130,794 		JBrowse link
G Mir145 microRNA 145 involved_in ISO (PMID:19409607) RGD PMID:19409607 NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727 		JBrowse link
mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nanog Nanog homeobox acts_upstream_of_or_within ISO MGI:109452 (PMID:16801560) RGD PMID:16801560 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:10742100) RGD PMID:10742100 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Smad1 SMAD family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1919200 (PMID:16801560)		 Ensembl
RGD		 PMID:16801560 GO_REF:0000107 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651 		JBrowse link
mesodermal cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857137 (PMID:7657163)		 Ensembl
RGD		 PMID:7657163 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO (MGI:3768605|PMID:17785448) RGD PMID:17785448 MGI:3768605 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Hoxa11 homeobox A11 involved_in ISO (MGI:3768605|PMID:17785448) RGD PMID:17785448 MGI:3768605 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3768605|PMID:17785448)		 UniProt
RGD		 PMID:17785448 GO_REF:0000024 MGI:3768605 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of ISO MGI:98956 (PMID:17462603) RGD PMID:17462603 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:3768605|PMID:17785448) RGD PMID:17785448 MGI:3768605 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within ISO MGI:2447721 (PMID:9490412) RGD PMID:9490412 NCBI chr 1:181,387,851...181,392,762
Ensembl chr 1:181,388,684...181,392,593 		JBrowse link
mesodermal to mesenchymal transition involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in ISO (MGI:3772748|PMID:18171685) RGD PMID:18171685 MGI:3772748 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Tasor transcription activation suppressor involved_in ISO (MGI:6109647|PMID:28839193) RGD PMID:28839193 MGI:6109647 NCBI chr16:2,606,807...2,669,902
Ensembl chr16:2,603,936...2,667,292 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101948 (PMID:25813538)		 Ensembl
RGD		 PMID:25813538 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
mesonephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857856 (PMID:20040500)		 Ensembl
RGD		 PMID:20040500 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Mir216a microRNA 216a involved_in ISO MGI:6361469 (PMID:31367007) RGD PMID:31367007 NCBI chr14:102,524,105...102,524,210
Ensembl chr14:102,524,105...102,524,210 		JBrowse link
G Mir216b microRNA 216b involved_in ISO MGI:6361477 (PMID:31367007) RGD PMID:31367007 NCBI chr14:102,513,054...102,513,155
Ensembl chr14:102,513,054...102,513,155 		JBrowse link
G Mir217 microRNA 217 involved_in ISO (PMID:31367007) RGD PMID:31367007 NCBI chr14:102,531,505...102,531,609
Ensembl chr14:102,531,505...102,531,609 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:16054034) RGD PMID:16054034 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035 		JBrowse link
mesonephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISO (MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:5009396 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:5009396 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3704067|PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3704067|PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:98371 (PMID:21212101)		 UniProt
RGD		 PMID:21212101 GO_REF:0000024 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:98370 (PMID:21212101)		 UniProt
RGD		 PMID:21212101 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
midbrain-hindbrain boundary development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO MGI:1857163 (PMID:15607945) RGD PMID:15607945 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:2150347 (PMID:17601531) RGD PMID:17601531 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:16651541) RGD PMID:16651541 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:11029008), (PMID:19795512) RGD PMID:11029008 PMID:19795512 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1857490 (PMID:2205396) RGD PMID:2205396 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single stranded DNA binding protein 3 involved_in ISO
IEA		 (MGI:3578570|PMID:15857913)
GO_REF:0000107		 RGD
Ensembl		 PMID:15857913 GO_REF:0000107 MGI:3578570 NCBI chr 5:121,691,370...121,828,035
Ensembl chr 5:121,691,393...121,827,992 		JBrowse link
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1856382 (PMID:8555108) RGD PMID:8555108 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:16651541) RGD PMID:16651541 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104877 (PMID:11500373)		 Ensembl
RGD		 PMID:11500373 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO MGI:104853 (PMID:11522634) RGD PMID:11522634 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261 		JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
middle ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 acts_upstream_of_or_within ISO MGI:1857637 (PMID:8152482) RGD PMID:8152482 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO		 GO_REF:0000107
MGI:2687362 (PMID:19185569)		 Ensembl
RGD		 PMID:19185569 GO_REF:0000107 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:3785162 (PMID:27959908) RGD PMID:27959908 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:2150426 (PMID:10471511) RGD PMID:10471511 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 acts_upstream_of_or_within ISO MGI:3775095 (PMID:18219393) RGD PMID:18219393 NCBI chr 1:22,172,275...22,415,978
Ensembl chr 1:22,172,275...22,415,976 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:3574787 (PMID:15630379) RGD PMID:15630379 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397 (PMID:17525797) RGD PMID:17525797 NCBI chr17:4,482,168...4,485,153 JBrowse link
G Gsc goosecoid homeobox involved_in ISO (MGI:3035838|PMID:14973294) RGD PMID:14973294 MGI:3035838 NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111 		JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:102778|MGI:1857530|MGI:2385711 (PMID:15634706), (PMID:15861402), (PMID:16221728)		 Ensembl
RGD		 PMID:15634706 PMID:15861402 PMID:16221728 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (PMID:16955138) RGD PMID:16955138 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952 		JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1916289 (PMID:16955138)		 Ensembl
RGD		 PMID:16955138 GO_REF:0000107 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:1933766 (PMID:16330189) RGD PMID:16330189 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO MGI:2178233|MGI:2386570 (PMID:17523175) RGD PMID:17523175 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (PMID:17712420) RGD PMID:17712420 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO MGI:1931319 (PMID:14973294) RGD PMID:14973294 NCBI chr14:69,183,795...69,186,182
Ensembl chr14:69,183,820...69,186,061 		JBrowse link
G Nog noggin involved_in IEA
ISO		 GO_REF:0000107
(PMID:10080184)		 Ensembl
RGD		 PMID:10080184 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q91ZD1 (MGI:3848564|PMID:19389375)		 UniProt
RGD		 PMID:19389375 GO_REF:0000024 MGI:3848564 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3848564|PMID:19389375)		 UniProt
RGD		 PMID:19389375 GO_REF:0000024 MGI:3848564 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3626341 (PMID:16571658)		 Ensembl
RGD		 PMID:16571658 GO_REF:0000107 NCBI chr 3:61,575,447...61,594,393
Ensembl chr 3:61,575,447...61,594,347 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:1857640|MGI:98218 (PMID:7758948), (PMID:9729491) RGD PMID:7758948 PMID:9729491 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (PMID:9729491) RGD PMID:9729491 NCBI chr 3:14,132,574...14,168,533
Ensembl chr 3:14,094,004...14,168,535 		JBrowse link
G Rpl38 ribosomal protein L38 acts_upstream_of_or_within ISO MGI:1861228 (PMID:21062742) RGD PMID:21062742 NCBI chr10:99,701,330...99,705,004
Ensembl chr10:99,701,362...99,705,004
Ensembl chr14:99,701,362...99,705,004
Ensembl chr 3:99,701,362...99,705,004
Ensembl chr 2:99,701,362...99,705,004
Ensembl chr16:99,701,362...99,705,004 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:2655195 (PMID:12874121) RGD PMID:12874121 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six2 SIX homeobox 2 acts_upstream_of_or_within ISO MGI:96174 (PMID:15634706) RGD PMID:15634706 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1932522|MGI:2179190|MGI:2179191|MGI:3619149 (PMID:15652707), (PMID:16600992), (PMID:20501333)		 UniProt
RGD		 PMID:15652707 PMID:16600992 PMID:20501333 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tshz1 teashirt zinc finger homeobox 1 acts_upstream_of_or_within ISO MGI:3721421 (PMID:17586487) RGD PMID:17586487 NCBI chr18:77,376,399...77,452,815
Ensembl chr18:77,377,394...77,453,509 		JBrowse link
morphogenesis of embryonic epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:2180721 (PMID:15739227) RGD PMID:15739227 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148567|MGI:3045749 (PMID:16102745) RGD PMID:16102745 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153818 (PMID:15843416) RGD PMID:15843416 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Grsf1 G-rich RNA sequence binding factor 1 acts_upstream_of_or_within ISO (PMID:15857914) RGD PMID:15857914 NCBI chr14:19,412,944...19,429,364
Ensembl chr14:19,412,156...19,429,362 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2657215 (PMID:16607638)		 Ensembl
RGD		 PMID:16607638 GO_REF:0000107 NCBI chr 6:131,983,059...132,005,665
Ensembl chr 6:131,983,056...132,005,818 		JBrowse link
G Kdf1 keratinocyte differentiation factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5529391|PMID:24075906)		 UniProt
RGD		 PMID:24075906 GO_REF:0000024 MGI:5529391 NCBI chr 5:145,744,753...145,758,150
Ensembl chr 5:145,745,099...145,755,878 		JBrowse link
G Lama5 laminin subunit alpha 5 acts_upstream_of_or_within ISO MGI:1934917 (PMID:16365040) RGD PMID:16365040 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451 		JBrowse link
G Pcdh8 protocadherin 8 acts_upstream_of_or_within ISO (PMID:12591245) RGD PMID:12591245 NCBI chr15:55,198,470...55,203,039
Ensembl chr15:55,198,459...55,205,872 		JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 acts_upstream_of_or_within ISO MGI:2152755 (PMID:8625829) RGD PMID:8625829 NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064 		JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:1889322 (PMID:12499390) RGD PMID:12499390 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331 		JBrowse link
G Tbx18 T-box transcription factor 18 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3044914 (PMID:16511601)		 GO_Central
RGD		 PMID:16511601 GO_REF:0000033 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
G Tgfb1i1 transforming growth factor beta 1 induced transcript 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15687259)		 Ensembl
RGD		 PMID:15687259 GO_REF:0000107 NCBI chr 1:182,828,553...182,835,465
Ensembl chr 1:182,828,544...182,837,080 		JBrowse link
G Vegfc vascular endothelial growth factor C acts_upstream_of_or_within ISO MGI:3026650 (PMID:14634646) RGD PMID:14634646 NCBI chr16:37,712,251...37,827,845
Ensembl chr16:37,712,262...37,827,848 		JBrowse link
myotome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmrt2 doublesex and mab-3 related transcription factor 2 acts_upstream_of ISO MGI:3512139 (PMID:16387292) RGD PMID:16387292 NCBI chr 1:223,317,543...223,324,131
Ensembl chr 1:223,317,642...223,324,131 		JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:3578604|PMID:15788460), (MGI:4421263|PMID:19962975) RGD PMID:15788460 PMID:19962975 MGI:3578604 MGI:4421263 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:3578604|PMID:15788460), (MGI:4421263|PMID:19962975) RGD PMID:15788460 PMID:19962975 MGI:3578604 MGI:4421263 NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within ISO MGI:5315747 (PMID:22228095) RGD PMID:22228095 NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288 		JBrowse link
negative regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO (PMID:24859262) RGD PMID:24859262 NCBI chr 3:89,808,837...89,836,977
Ensembl chr 3:89,797,880...89,836,973 		JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO (PMID:9676199) RGD PMID:9676199 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
negative regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO (MGI:1349347|PMID:10654605) RGD PMID:10654605 MGI:1349347 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
negative regulation of ectodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd7 frizzled class receptor 7 involved_in ISO (PMID:18681827) RGD PMID:18681827 NCBI chr 9:60,931,433...60,934,252
Ensembl chr 9:60,930,875...60,935,781 		JBrowse link
negative regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rps6ka6 ribosomal protein S6 kinase A6 involved_in ISO (MGI:3041939|PMID:15121846) RGD PMID:15121846 MGI:3041939 NCBI chr  X:76,353,316...76,454,502
Ensembl chr  X:76,353,760...76,454,484 		JBrowse link
negative regulation of endodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col5a1 collagen type V alpha 1 chain involved_in ISO
IEA		 (PMID:23154389)
GO_REF:0000107		 RGD
Ensembl		 PMID:23154389 GO_REF:0000107 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588 		JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in ISO (PMID:23154389) RGD PMID:23154389 NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154 		JBrowse link
negative regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:4441249 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO (MGI:3822373|PMID:19112489) RGD PMID:19112489 MGI:3822373 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO (MGI:3822373|PMID:19112489) RGD PMID:19112489 MGI:3822373 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:3039059|PMID:15042700) RGD PMID:15042700 MGI:3039059 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529 		JBrowse link
negative regulation of heterotypic cell-cell adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISO
ISS		 (PMID:10604883)
GO_REF:0000024		 RGD
UniProt		 PMID:10604883 GO_REF:0000024 NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
IEA		 (PMID:21571275)
GO_REF:0000107		 RGD
Ensembl		 PMID:21571275 GO_REF:0000107 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Il10 interleukin 10 involved_in ISO UniProtKB:P06804 (MGI:5796069|PMID:26808574) RGD PMID:26808574 MGI:5796069 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313 		JBrowse link
G Il1rn interleukin 1 receptor antagonist involved_in ISO
IEA		 (PMID:2139180)
GO_REF:0000107		 RGD
Ensembl		 PMID:2139180 GO_REF:0000107 NCBI chr 3:7,111,567...7,127,451
Ensembl chr 3:7,111,550...7,127,445 		JBrowse link
G Klf4 KLF transcription factor 4 involved_in ISO (PMID:20551324) RGD PMID:20551324 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602 		JBrowse link
G Map2k5 mitogen activated protein kinase kinase 5 involved_in IMP PMID:20551324 BHF-UCL PMID:20551324 RGD:8553940 NCBI chr 8:63,625,220...63,852,090
Ensembl chr 8:63,625,221...63,851,983 		JBrowse link
G Mapk7 mitogen-activated protein kinase 7 involved_in ISO
IEA		 UniProtKB:Q62862 (PMID:20551324)
GO_REF:0000107		 RGD
Ensembl		 PMID:20551324 GO_REF:0000107 NCBI chr10:46,170,264...46,176,262
Ensembl chr10:46,170,167...46,176,267 		JBrowse link
G Mbp myelin basic protein involved_in ISO
IEA		 (PMID:22524708)
GO_REF:0000107		 RGD
Ensembl		 PMID:22524708 GO_REF:0000107 NCBI chr18:75,855,878...75,966,404
Ensembl chr18:75,855,878...75,966,404 		JBrowse link
G Mir221 microRNA 221 involved_in ISO (PMID:20110463) RGD PMID:20110463 NCBI chr  X:3,429,465...3,429,573
Ensembl chr  X:3,429,465...3,429,573 		JBrowse link
G Myadm myeloid-associated differentiation marker involved_in ISO
IBA
IEA		 (PMID:23264465)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:23264465 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:65,864,180...65,874,701
Ensembl chr 1:65,864,173...65,874,035 		JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in ISO
IEA		 (PMID:27400149)
GO_REF:0000107		 RGD
Ensembl		 PMID:27400149 GO_REF:0000107 NCBI chr 4:153,128,334...153,253,905
Ensembl chr 4:153,128,334...153,253,905 		JBrowse link
negative regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:20559569) RGD PMID:20559569 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:4441249 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:98956 (PMID:17462603) RGD PMID:17462603 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
negative regulation of mitotic cell cycle, embryonic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:4941059|PMID:21325504)		 UniProt
Ensembl
RGD		 PMID:21325504 GO_REF:0000024 GO_REF:0000107 MGI:4941059 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Fzd3 frizzled class receptor 3 involved_in ISO (MGI:4941059|PMID:21325504) RGD PMID:21325504 MGI:4941059 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369 		JBrowse link
negative regulation of neural crest formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuz fuzzy planar cell polarity protein involved_in ISS
ISO		 GO_REF:0000024
(MGI:5498583|PMID:23806618)		 UniProt
RGD		 PMID:23806618 GO_REF:0000024 MGI:5498583 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530 		JBrowse link
negative regulation of Notch signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5545944|PMID:23072809)		 UniProt
Ensembl
RGD		 PMID:23072809 GO_REF:0000024 GO_REF:0000107 MGI:5545944 NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008 		JBrowse link
negative regulation of odontoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msx1 msh homeobox 1 involved_in ISO (MGI:7539469|PMID:29148101), (MGI:7539470|PMID:24028588) RGD PMID:24028588 PMID:29148101 MGI:7539469 MGI:7539470 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (PMID:19056682) RGD PMID:19056682 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
negative regulation of planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (PMID:19056682) RGD PMID:19056682 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
negative regulation of prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857137 (PMID:11401393), (PMID:18393306)		 Ensembl
RGD		 PMID:11401393 PMID:18393306 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (PMID:16324690) RGD PMID:16324690 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Sulf1 sulfatase 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:4941125|PMID:20410206)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:20410206 GO_REF:0000024 GO_REF:0000107 MGI:4941125 NCBI chr 5:6,362,894...6,526,174
Ensembl chr 5:6,362,911...6,525,584 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857617 (PMID:18804104)		 Ensembl
RGD		 PMID:18804104 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr161 G protein-coupled receptor 161 involved_in ISO (MGI:5468365|PMID:23332756) RGD PMID:23332756 MGI:5468365 NCBI chr13:77,578,257...77,623,661
Ensembl chr13:77,577,739...77,619,613 		JBrowse link
negative regulation of stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2149672 (PMID:18173746)		 Ensembl
RGD		 PMID:18173746 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858008 (PMID:17537789)		 Ensembl
RGD		 PMID:17537789 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Wnt6 Wnt family member 6 acts_upstream_of_or_within ISO (PMID:11948913) RGD PMID:11948913 NCBI chr 9:76,329,882...76,343,523
Ensembl chr 9:76,329,882...76,343,523 		JBrowse link
neural crest cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 involved_in ISO MGI:1857637 (PMID:23933587) RGD PMID:23933587 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO		 GO_REF:0000107
MGI:1857473|MGI:3773698|MGI:4867385 (PMID:17294360), (PMID:23933587)		 Ensembl
RGD		 PMID:17294360 PMID:23933587 GO_REF:0000107 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3045799 (PMID:20130188)		 Ensembl
RGD		 PMID:20130188 GO_REF:0000107 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsc goosecoid homeobox involved_in ISO (PMID:24290375) RGD PMID:24290375 NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111 		JBrowse link
neural crest formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrd chordin involved_in ISO MGI:2157350 (PMID:17685487) RGD PMID:17685487 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Kbtbd8 kelch repeat and BTB domain containing 8 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26399832)		 UniProt
Ensembl
RGD		 PMID:26399832 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:127,675,967...127,688,785
Ensembl chr 4:127,676,141...127,687,697 		JBrowse link
G Klhl12 kelch-like family member 12 involved_in ISO
ISS
IEA		 (PMID:27716508)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643 		JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in ISO (PMID:11029007) RGD PMID:11029007 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Nolc1 nucleolar and coiled-body phosphoprotein 1 involved_in ISO
IEA
ISS		 (PMID:26399832)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26399832 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088 		JBrowse link
G Pdcd6 programmed cell death 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27716508)		 UniProt
RGD		 PMID:27716508 GO_REF:0000024 NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189 		JBrowse link
G Pef1 penta-EF hand domain containing 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:27716508)		 UniProt
Ensembl
RGD		 PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067 		JBrowse link
G Polr1b RNA polymerase I subunit B involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:116,333,910...116,358,385
Ensembl chr 3:116,333,889...116,358,379 		JBrowse link
G Tcof1 treacle ribosome biogenesis factor 1 involved_in ISO (PMID:26399832) RGD PMID:26399832 NCBI chr18:54,267,015...54,300,324
Ensembl chr18:54,267,026...54,300,324 		JBrowse link
neural fold bending term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Luzp1 leucine zipper protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:3818454 (PMID:18801334)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:18801334 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:148,706,094...148,781,616
Ensembl chr 5:148,706,138...148,781,609 		JBrowse link
neural fold elevation formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in ISO UniProtKB:P23359 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO UniProtKB:P49003 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857719 (PMID:10328919)		 Ensembl
RGD		 PMID:10328919 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
neural fold formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cecr2 CECR2, histone acetyl-lysine reader acts_upstream_of_or_within ISO MGI:3574034 (PMID:21246654) RGD PMID:21246654 NCBI chr 4:153,890,310...153,998,078
Ensembl chr 4:153,890,206...153,993,451 		JBrowse link
G Cfl1 cofilin 1 acts_upstream_of_or_within ISO MGI:3574399 (PMID:15649475) RGD PMID:15649475 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587 		JBrowse link
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) RGD PMID:17565372 NCBI chr16:19,429,578...19,520,320
Ensembl chr16:19,429,578...19,519,587 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163) RGD PMID:11311163 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3522498 (PMID:16423343) RGD PMID:16423343 NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359 		JBrowse link
neural plate axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520 		JBrowse link
G Ptch1 patched 1 involved_in ISO (MGI:5142377|PMID:11517919) RGD PMID:11517919 MGI:5142377 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
neural plate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:22102609)		 Ensembl
RGD		 PMID:22102609 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Zic2 Zic family member 2 involved_in ISO MGI:106676 (PMID:17490632) RGD PMID:17490632 NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:106679 (PMID:17490632) RGD PMID:17490632 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
neural plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2177743 (PMID:7774020) RGD PMID:7774020 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
neural plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3578147|MGI:3822451 (PMID:17507402), (PMID:18794329) RGD PMID:17507402 PMID:18794329 NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1862000 (PMID:16712836)		 Ensembl
RGD		 PMID:16712836 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:3042264 (PMID:15384171) RGD PMID:15384171 NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (PMID:9883720) RGD PMID:9883720 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (PMID:9883720) RGD PMID:9883720 NCBI chr13:68,673,702...68,770,846
Ensembl chr13:68,673,722...68,839,742 		JBrowse link
G Adm adrenomedullin acts_upstream_of_or_within ISO MGI:2176598 (PMID:16981008) RGD PMID:16981008 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654 		JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within ISO MGI:1857553 (PMID:8673125) RGD PMID:8673125 NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220 		JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within ISO MGI:1888997 (PMID:11504943), (PMID:9216040) RGD PMID:9216040 PMID:11504943 NCBI chr 7:25,494,143...25,579,540
Ensembl chr 7:25,494,609...25,579,540 		JBrowse link
G Arhgap35 Rho GTPase activating protein 35 acts_upstream_of_or_within ISO MGI:2448591 (PMID:11044403) RGD PMID:11044403 NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298 		JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO MGI:5469314 (PMID:23129809) RGD PMID:23129809 NCBI chr 5:145,908,173...145,981,552
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3055492 (PMID:16170314) RGD PMID:16170314 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISS
ISO		 PMID:11163238
(MGI:1930354|PMID:11163238)		 RGD PMID:11163238 PMID:11163238 MGI:1930354, RGD:734638 NCBI chr 2:234,840,880...234,850,520
Ensembl chr 2:234,840,858...234,850,523 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:19850029)		 Ensembl
RGD		 PMID:19850029 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Brd2 bromodomain containing 2 acts_upstream_of_or_within ISO MGI:3840071 (PMID:19362612) RGD PMID:19362612 NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388 		JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A acts_upstream_of_or_within ISO MGI:5708063 (PMID:24947469) RGD PMID:24947469 NCBI chr14:67,349,004...67,435,883
Ensembl chr14:67,351,353...67,435,949 		JBrowse link
G Cdk20 cyclin-dependent kinase 20 acts_upstream_of_or_within ISO MGI:6113512 (PMID:28817564) RGD PMID:28817564 NCBI chr17:701,122...707,869
Ensembl chr17:701,124...707,826 		JBrowse link
G Cecr2 CECR2, histone acetyl-lysine reader acts_upstream_of_or_within ISO MGI:2135272|MGI:3574034|MGI:4829945 (PMID:15640247), (PMID:20589882), (PMID:21246654) RGD PMID:15640247 PMID:20589882 PMID:21246654 NCBI chr 4:153,890,310...153,998,078
Ensembl chr 4:153,890,206...153,993,451 		JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:2667273|PMID:12842012)
MGI:107926|MGI:2135272 (PMID:17229766)		 RGD PMID:12842012 PMID:17229766 MGI:2667273 NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2385355 (PMID:12149478) RGD PMID:12149478 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Cluap1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5523142 (PMID:23742838)		 Ensembl
RGD		 PMID:23742838 GO_REF:0000107 NCBI chr10:11,587,963...11,619,711
Ensembl chr10:11,588,017...11,619,711 		JBrowse link
G Cobl cordon-bleu WH2 repeat protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2135272 (PMID:14512015)		 Ensembl
RGD		 PMID:14512015 GO_REF:0000107 NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800 		JBrowse link
G Deaf1 DEAF1 transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:3029622|PMID:14966286)		 UniProt
RGD		 PMID:14966286 GO_REF:0000024 MGI:3029622 NCBI chr 1:196,401,857...196,435,541
Ensembl chr 1:196,401,857...196,435,541 		JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO MGI:3529997 (PMID:15710412) RGD PMID:15710412 NCBI chr16:55,246,716...55,671,441
Ensembl chr16:55,291,584...55,671,439 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within ISO MGI:2429760 (PMID:12421720) RGD PMID:12421720 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820 		JBrowse link
G Enah ENAH, actin regulator acts_upstream_of_or_within ISO MGI:109268|MGI:97549 (PMID:10069337), (PMID:15371503) RGD PMID:10069337 PMID:15371503 NCBI chr13:93,617,747...93,738,119
Ensembl chr13:93,626,944...93,740,955 		JBrowse link
G Fuz fuzzy planar cell polarity protein involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:21840926)
MGI:4346364 (PMID:19877275)
(MGI:4438317|PMID:19767740), (MGI:5296277|PMID:21840926)
GO_REF:0000024		 RGD
UniProt		 PMID:19767740 PMID:19877275 PMID:21840926 GO_REF:0000024 MGI:4438317 MGI:5296277 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530 		JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO MGI:108474 (PMID:16495441) RGD PMID:16495441 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369 		JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO MGI:108476 (PMID:16495441) RGD PMID:16495441 NCBI chr 7:70,055,012...70,086,781
Ensembl chr 7:70,055,068...70,086,776 		JBrowse link
G Glmn glomulin, FKBP associated protein acts_upstream_of_or_within ISO MGI:3817643 (PMID:22405651) RGD PMID:22405651 NCBI chr14:2,187,144...2,231,295
Ensembl chr14:2,187,642...2,230,420 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:4835348|PMID:20654612), (MGI:4867118|PMID:20978075)
MGI:4331210 (PMID:21262862)		 RGD PMID:20654612 PMID:20978075 PMID:21262862 MGI:4835348 MGI:4867118 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Grhl3 grainyhead-like transcription factor 3 involved_in ISO (MGI:3689640|PMID:16949565), (MGI:4835348|PMID:20654612) RGD PMID:16949565 PMID:20654612 MGI:3689640 MGI:4835348 NCBI chr 5:147,774,161...147,806,291
Ensembl chr 5:147,774,160...147,806,160 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:3714713|PMID:17442300)
MGI:2137552 (PMID:15755804), (PMID:9636176)		 RGD PMID:9636176 PMID:15755804 PMID:17442300 MGI:3714713 NCBI chr 6:69,181,429...69,268,045
Ensembl chr 6:69,181,436...69,268,053 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:3827087|PMID:19000668) RGD PMID:19000668 MGI:3827087 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3829198 (PMID:18930042)		 Ensembl
RGD		 PMID:18930042 GO_REF:0000107 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within ISO MGI:3707373 (PMID:17027958) RGD PMID:17027958 NCBI chr11:51,051,520...51,124,909
Ensembl chr11:51,059,611...51,124,812 		JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:3711317 (PMID:17325035) RGD PMID:17325035 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) RGD PMID:25463925 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within ISO MGI:5448825 (PMID:22949634) RGD PMID:22949634 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062 		JBrowse link
G Kif20b kinesin family member 20B acts_upstream_of_or_within ISO MGI:3578531 (PMID:15755804) RGD PMID:15755804 NCBI chr 1:232,428,293...232,483,798
Ensembl chr 1:232,428,371...232,483,787 		JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1890208 (PMID:11719201)		 Ensembl
RGD		 PMID:11719201 GO_REF:0000107 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908 		JBrowse link
G Lias lipoic acid synthetase acts_upstream_of_or_within ISO MGI:3578174 (PMID:15755804) RGD PMID:15755804 NCBI chr14:42,876,699...42,893,824
Ensembl chr14:42,876,699...42,893,783 		JBrowse link
G Lmo4 LIM domain only 4 involved_in
acts_upstream_of_or_within		 ISO (MGI:3689640|PMID:16949565)
MGI:3035827|MGI:3574586 (PMID:14966285), (PMID:15691703)		 RGD PMID:14966285 PMID:15691703 PMID:16949565 MGI:3689640 NCBI chr 2:233,264,180...233,280,881
Ensembl chr 2:233,264,182...233,280,880 		JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5603707|PMID:24639464)		 UniProt
Ensembl
RGD		 PMID:24639464 GO_REF:0000024 GO_REF:0000107 MGI:5603707 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of
acts_upstream_of_or_within		 ISO MGI:98958 (PMID:19056682)
MGI:1861309|MGI:2673982|MGI:4415718|MGI:98958 (PMID:10545599), (PMID:15469977), (PMID:19653321), (PMID:19795512)		 RGD PMID:10545599 PMID:15469977 PMID:19056682 PMID:19653321 PMID:19795512 MGI:61254 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839484 (PMID:20630950) RGD PMID:20630950 NCBI chr  X:66,404,807...66,427,775
Ensembl chr  X:66,404,760...66,428,387 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4410614|MGI:4433029 (PMID:19776033), (PMID:23454480)		 Ensembl
RGD		 PMID:19776033 PMID:23454480 GO_REF:0000107 NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO
IEA		 (MGI:5503248|PMID:23704330)
GO_REF:0000107		 RGD
Ensembl		 PMID:23704330 GO_REF:0000107 MGI:5503248 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO (MGI:5468075|PMID:23267094) RGD PMID:23267094 MGI:5468075 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase acts_upstream_of ISO (PMID:25855017), (PMID:29222906) RGD PMID:25855017 PMID:29222906 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (PMID:16831833) RGD PMID:16831833 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856173|MGI:1862000 (PMID:16712836)		 Ensembl
RGD		 PMID:16712836 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3578528 (PMID:15755804)		 Ensembl
RGD		 PMID:15755804 GO_REF:0000107 NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:84247|PMID:8951055)		 UniProt
RGD		 PMID:8951055 GO_REF:0000024 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO MGI:3043030 (PMID:15384171) RGD PMID:15384171 NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042 		JBrowse link
G Pfn1 profilin 1 acts_upstream_of_or_within ISO MGI:108360 (PMID:10069337) RGD PMID:10069337 NCBI chr10:55,365,263...55,367,968
Ensembl chr10:55,365,262...55,527,631 		JBrowse link
G Phactr4 phosphatase and actin regulator 4 involved_in ISO (MGI:3719969|PMID:17609112) RGD PMID:17609112 MGI:3719969 NCBI chr 5:144,549,350...144,621,259
Ensembl chr 5:144,549,363...144,620,865 		JBrowse link
G Plxnb2 plexin B2 involved_in ISO (MGI:3712712|PMID:17554007) RGD PMID:17554007 MGI:3712712 NCBI chr 7:120,232,276...120,258,385
Ensembl chr 7:120,232,331...120,258,330 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO
IEA		 (PMID:21901791)
MGI:5645931 (PMID:25190059)
GO_REF:0000107		 RGD
Ensembl		 PMID:21901791 PMID:25190059 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97760 (PMID:22007132)		 Ensembl
RGD		 PMID:22007132 GO_REF:0000107 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430 		JBrowse link
G Prkacb protein kinase cAMP-activated catalytic subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97592 (PMID:22007132)		 Ensembl
RGD		 PMID:22007132 GO_REF:0000107 NCBI chr 2:235,636,878...235,726,928
Ensembl chr 2:235,636,885...235,726,198 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:1857447 (PMID:9262482) RGD PMID:9262482 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Ptk7 protein tyrosine kinase 7 acts_upstream_of_or_within ISO MGI:2135272|MGI:3046905|MGI:3640803 (PMID:15229603), (PMID:20704721) RGD PMID:15229603 PMID:20704721 NCBI chr 9:14,352,155...14,418,473
Ensembl chr 9:14,351,202...14,418,494 		JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in
acts_upstream_of_or_within		 ISO (MGI:69552|PMID:7720556)
MGI:2137533 (PMID:9636176)		 RGD PMID:7720556 PMID:9636176 MGI:69552 NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927 		JBrowse link
G Rala RAS like proto-oncogene A involved_in ISO (MGI:5504565|PMID:23063435) RGD PMID:23063435 MGI:5504565 NCBI chr17:47,092,163...47,145,192
Ensembl chr17:47,092,207...47,144,063 		JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO MGI:97858 (PMID:7607067) RGD PMID:7607067 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:97856 (PMID:7607067) RGD PMID:7607067 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177 		JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a acts_upstream_of_or_within ISO MGI:3029714 (PMID:14749425) RGD PMID:14749425 NCBI chr 1:127,128,934...127,172,918
Ensembl chr 1:127,128,934...127,172,918 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 acts_upstream_of_or_within ISO MGI:1100883|MGI:2135272 (PMID:17229766) RGD PMID:17229766 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031 		JBrowse link
G Rps7 ribosomal protein S7 acts_upstream_of_or_within ISO MGI:3043039 (PMID:15384171) RGD PMID:15384171 NCBI chr 6:45,266,200...45,271,064
Ensembl chr 6:45,223,980...45,271,145 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:2139360 (PMID:16790473) RGD PMID:16790473 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Sall4 spalt-like transcription factor 4 acts_upstream_of_or_within ISO MGI:1889585|MGI:3699175 (PMID:16790473) RGD PMID:16790473 NCBI chr 3:157,474,067...157,491,055
Ensembl chr 3:157,474,642...157,490,822 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 ISO (PMID:22095531)
MGI:1889322|MGI:2135272|MGI:5056373 (PMID:20643356), (PMID:21515572)		 RGD PMID:20643356 PMID:21515572 PMID:22095531 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331 		JBrowse link
G Sdc4 syndecan 4 acts_upstream_of_or_within ISO MGI:2135272 (PMID:23760952) RGD PMID:23760952 NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2135272|MGI:4440621 (PMID:19966784), (PMID:20215345) RGD PMID:19966784 PMID:20215345 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) RGD PMID:21122816 MGI:4881530 NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (PMID:20133625) RGD PMID:20133625 NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within ISO MGI:108078 (PMID:19850029) RGD PMID:19850029 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:892014 (PMID:19850029) RGD PMID:19850029 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Shroom3 shroom family member 3 acts_upstream_of_or_within ISO MGI:1889778 (PMID:16249236) RGD PMID:16249236 NCBI chr14:15,099,415...15,396,832
Ensembl chr14:15,099,423...15,396,915 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (PMID:9284043) RGD PMID:9284043 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within ISO MGI:1338031|MGI:1338881 (PMID:19592578) RGD PMID:19592578 NCBI chr 3:106,231,082...106,244,121
Ensembl chr 3:106,231,444...106,244,119 		JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:1338033|MGI:1338881|MGI:2156187 (PMID:19592578) RGD PMID:19592578 NCBI chr 1:84,558,159...84,580,616
Ensembl chr 1:84,558,166...84,580,616 		JBrowse link
G St14 ST14 transmembrane serine protease matriptase acts_upstream_of_or_within ISO MGI:1338031|MGI:1338033 (PMID:19592578) RGD PMID:19592578 NCBI chr 8:29,540,805...29,581,704
Ensembl chr 8:29,540,811...29,581,517 		JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (PMID:10385121) RGD PMID:10385121 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO MGI:3512046 (PMID:16155214) RGD PMID:16155214 NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:1856158 (PMID:16835439) RGD PMID:16835439 NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
G Tead2 TEA domain transcription factor 2 acts_upstream_of_or_within ISO MGI:3763367 (PMID:17868131) RGD PMID:17868131 NCBI chr 1:95,702,366...95,719,186
Ensembl chr 1:95,703,005...95,719,186 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2176682 (PMID:8622766), (PMID:9811866) RGD PMID:8622766 PMID:9811866 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO (MGI:74339|PMID:7600998) RGD PMID:7600998 MGI:74339 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (MGI:894212|PMID:9217007) RGD PMID:9217007 MGI:894212 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 acts_upstream_of_or_within ISO MGI:3698004 (PMID:17082251) RGD PMID:17082251 NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4456438 (PMID:20178780)		 Ensembl
RGD		 PMID:20178780 GO_REF:0000107 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO
IEA		 (MGI:2181331|PMID:11007897)
GO_REF:0000107		 RGD
Ensembl		 PMID:11007897 GO_REF:0000107 MGI:2181331 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507 		JBrowse link
G Trim71 tripartite motif containing 71 acts_upstream_of_or_within ISO MGI:4123844 (PMID:19098426) RGD PMID:19098426 NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807 		JBrowse link
G Tsc1 TSC complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2183146 (PMID:11438694)		 Ensembl
RGD		 PMID:11438694 GO_REF:0000107 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674 		JBrowse link
G Tsc2 TSC complex subunit 2 acts_upstream_of_or_within ISO MGI:1926345 (PMID:10096549) RGD PMID:10096549 NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:3664273 (PMID:19223390) RGD PMID:19223390 NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857265 (PMID:7729687) RGD PMID:7729687 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:105056|MGI:107926|MGI:1100883|MGI:1349164|MGI:1857642|MGI:1918711|MGI:1923799|MGI:2139764|MGI:98958 (PMID:11709546), (PMID:12499390), (PMID:14512015), (PMID:15229603), (PMID:17229766), (PMID:17433286), (PMID:19966784), (PMID:21246654), (PMID:23760952) RGD PMID:11709546 PMID:12499390 PMID:14512015 PMID:15229603 PMID:17229766 More... NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
G Vasp vasodilator-stimulated phosphoprotein involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:108360 (PMID:15371503)		 GO_Central
RGD		 PMID:15371503 GO_REF:0000033 NCBI chr 1:78,910,009...78,925,791
Ensembl chr 1:78,910,011...78,925,061 		JBrowse link
G Wdr83 WD repeat domain 83 acts_upstream_of_or_within ISO MGI:4367006 (PMID:37509073) RGD PMID:37509073 NCBI chr19:23,076,948...23,082,569
Ensembl chr19:23,077,010...23,082,563 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1298218|MGI:2135272 (PMID:17433286), (PMID:19795512) RGD PMID:17433286 PMID:19795512 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387501 (PMID:16598713) RGD PMID:16598713 NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157 		JBrowse link
G Zic2 Zic family member 2 acts_upstream_of_or_within ISO MGI:1862004 (PMID:15384171) RGD PMID:15384171 NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522 		JBrowse link
G Zic5 Zic family member 5 acts_upstream_of_or_within ISO MGI:3052154 (PMID:15136147) RGD PMID:15136147 NCBI chr15:99,558,285...99,567,023
Ensembl chr15:99,560,323...99,567,035 		JBrowse link
neural tube development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 involved_in ISO (PMID:16237707) RGD PMID:16237707 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 acts_upstream_of_or_within ISO MGI:3715977 (PMID:17589504) RGD PMID:17589504 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520 		JBrowse link
G Cecr2 CECR2, histone acetyl-lysine reader acts_upstream_of_or_within ISO MGI:3574034 (PMID:22045912) RGD PMID:22045912 NCBI chr 4:153,890,310...153,998,078
Ensembl chr 4:153,890,206...153,993,451 		JBrowse link
G Dact1 dishevelled-binding antagonist of beta-catenin 1 involved_in ISO (PMID:22610794) RGD PMID:22610794 NCBI chr 6:89,790,676...89,818,254
Ensembl chr 6:89,790,644...89,817,906 		JBrowse link
G Dchs1 dachsous cadherin-related 1 acts_upstream_of_or_within ISO MGI:4867020 (PMID:21303848) RGD PMID:21303848 NCBI chr 1:160,104,931...160,138,958
Ensembl chr 1:160,104,931...160,124,808 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:8817329) RGD PMID:8817329 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664 		JBrowse link
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO MGI:2448472 (PMID:11287184) RGD PMID:11287184 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117 		JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 acts_upstream_of_or_within ISO MGI:3042750 (PMID:18590716) RGD PMID:18590716 NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612 		JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO MGI:2386906 (PMID:10693795) RGD PMID:10693795 NCBI chr 6:31,171,495...31,182,484
Ensembl chr 6:31,178,119...31,182,447 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:3834146 (PMID:19056373) RGD PMID:19056373 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:8387379) RGD PMID:8387379 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4942413 (PMID:21377456)		 GO_Central
RGD		 PMID:21377456 GO_REF:0000033 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:104876|MGI:104877 (PMID:10804175), (PMID:11500373) RGD PMID:10804175 PMID:11500373 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO MGI:104853 (PMID:11500373) RGD PMID:11500373 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:104853 (PMID:10804175)		 UniProt
RGD		 PMID:10804175 GO_REF:0000024 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO MGI:2176180|MGI:4420980 (PMID:19521792) RGD PMID:19521792 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Inka1 inka box actin regulator 1 acts_upstream_of_or_within ISO MGI:4438483 (PMID:20175189) RGD PMID:20175189 NCBI chr 8:108,674,263...108,675,953
Ensembl chr 8:108,674,263...108,675,953 		JBrowse link
G Intu inturned planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:25774014)		 Ensembl
RGD		 PMID:25774014 GO_REF:0000107 NCBI chr 2:123,600,972...123,685,331
Ensembl chr 2:123,609,807...123,682,676 		JBrowse link
G Itpk1 inositol-tetrakisphosphate 1-kinase acts_upstream_of_or_within ISO MGI:3587933 (PMID:19482943) RGD PMID:19482943 NCBI chr 6:121,710,750...121,844,501
Ensembl chr 6:121,710,755...121,844,107 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA
ISO		 GO_REF:0000107
(PMID:30655546)		 Ensembl
RGD		 PMID:30655546 GO_REF:0000107 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within ISO MGI:4126347|MGI:5516011 (PMID:23028370) RGD PMID:23028370 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062 		JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:2181727 (PMID:10330409) RGD PMID:10330409 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (PMID:19795512) RGD PMID:19795512 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate involved_in IEA
ISO		 GO_REF:0000107
(PMID:30655546)		 Ensembl
RGD		 PMID:30655546 GO_REF:0000107 NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839485 (PMID:20589884) RGD PMID:20589884 NCBI chr  X:66,404,807...66,427,775
Ensembl chr  X:66,404,760...66,428,387 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97487 (PMID:10419687)		 Ensembl
RGD		 PMID:10419687 GO_REF:0000107 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Nog noggin acts_upstream_of_or_within ISO MGI:1862000 (PMID:9585504) RGD PMID:9585504 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1857230 (PMID:7789282) RGD PMID:7789282 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Nup133 nucleoporin 133 acts_upstream_of_or_within ISO MGI:3578539 (PMID:18539113) RGD PMID:18539113 NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239 		JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO MGI:97306 (PMID:10419687) RGD PMID:10419687 NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042 		JBrowse link
G Phgdh phosphoglycerate dehydrogenase acts_upstream_of_or_within ISO MGI:3769591 (PMID:19114063) RGD PMID:19114063 NCBI chr 2:185,906,962...185,936,054
Ensembl chr 2:185,906,966...185,935,944 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3620600|MGI:3620601 (PMID:16467571)		 Ensembl
RGD		 PMID:16467571 GO_REF:0000107 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960 		JBrowse link
G Plxna2 plexin A2 involved_in ISO (MGI:4355631|PMID:19666519) RGD PMID:19666519 MGI:4355631 NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:2139360 (PMID:18818376) RGD PMID:18818376 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Sall2 spalt-like transcription factor 2 acts_upstream_of_or_within ISO MGI:3828110 (PMID:18818376) RGD PMID:18818376 NCBI chr15:25,021,345...25,038,918
Ensembl chr15:25,021,345...25,038,918 		JBrowse link
G Sall4 spalt-like transcription factor 4 acts_upstream_of_or_within ISO MGI:1354373|MGI:1889585 (PMID:18818376) RGD PMID:18818376 NCBI chr 3:157,474,067...157,491,055
Ensembl chr 3:157,474,642...157,490,822 		JBrowse link
G Sema3c semaphorin 3C involved_in ISO (MGI:4355631|PMID:19666519) RGD PMID:19666519 MGI:4355631 NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within ISO MGI:108078 (PMID:19850029) RGD PMID:19850029 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:892014 (PMID:19850029) RGD PMID:19850029 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (PMID:10385121) RGD PMID:10385121 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within ISO MGI:4440463 (PMID:20159594) RGD PMID:20159594 NCBI chr20:35,359,865...35,590,992
Ensembl chr20:35,359,863...35,590,415 		JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO MGI:1202879 (PMID:15057272) RGD PMID:15057272 NCBI chr10:36,423,443...36,454,350
Ensembl chr10:36,423,445...36,453,535 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:98507 (PMID:15057272) RGD PMID:15057272 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO (MGI:74339|PMID:7600998) RGD PMID:7600998 MGI:74339 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO
ISS		 (MGI:5319563|PMID:22508726)
GO_REF:0000024		 RGD
UniProt		 PMID:22508726 GO_REF:0000024 MGI:5319563 NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807 		JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within ISO MGI:5496675 (PMID:23141541) RGD PMID:23141541 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:19286674) RGD PMID:19286674 NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1298218 (PMID:19795512) RGD PMID:19795512 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO MGI:3050540 (PMID:15226444) RGD PMID:15226444 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748 		JBrowse link
neural tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brpf1 bromodomain and PHD finger containing, 1 acts_upstream_of_or_within ISO MGI:5705132 (PMID:27528195) RGD PMID:27528195 NCBI chr 4:146,456,325...146,472,781
Ensembl chr 4:146,456,318...146,472,649 		JBrowse link
G Casp8 caspase 8 acts_upstream_of_or_within ISO MGI:3609638 (PMID:12404118) RGD PMID:12404118 NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2179740 (PMID:11694877) RGD PMID:11694877 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Coq7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO MGI:2158322 (PMID:11716496) RGD PMID:11716496 NCBI chr 1:172,836,359...172,851,173
Ensembl chr 1:172,835,188...172,851,158 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO MGI:2682066 (PMID:14603322) RGD PMID:14603322 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (PMID:15930098) RGD PMID:15930098 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980 		JBrowse link
G Ipmk inositol polyphosphate multikinase acts_upstream_of_or_within ISO MGI:3583918 (PMID:15939867) RGD PMID:15939867 NCBI chr20:17,216,988...17,251,675
Ensembl chr20:17,218,037...17,251,705 		JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO (PMID:16260493) RGD PMID:16260493 NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3603514 (PMID:16000382) RGD PMID:16000382 NCBI chr18:1,802,519...1,926,988
Ensembl chr18:1,802,519...1,920,689 		JBrowse link
G Nup50 nucleoporin 50 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:103561|MGI:107532|MGI:2152414|MGI:2385621|MGI:2386173 (PMID:10891500)		 Ensembl
RGD		 PMID:10891500 GO_REF:0000107 NCBI chr 7:116,047,960...116,065,231
Ensembl chr 7:116,048,021...116,066,905 		JBrowse link
G Ptch1 patched 1 involved_in ISO (MGI:3687672|PMID:10500113) RGD PMID:10500113 MGI:3687672 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:8124714 RGD:69996 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1929004 (PMID:19786569)		 Ensembl
RGD		 PMID:19786569 GO_REF:0000107 NCBI chr 7:66,053,209...66,323,292
Ensembl chr 7:66,052,345...66,323,233 		JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO MGI:1928487 (PMID:19786569) RGD PMID:19786569 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744 		JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO MGI:3716885 (PMID:16357211) RGD PMID:16357211 NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:11406614) RGD PMID:11406614 NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ADP-ribosylation factor like GTPase 13B involved_in ISO (MGI:5444047|PMID:23014696) RGD PMID:23014696 MGI:5444047 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197 		JBrowse link
G Dzip1l DAZ interacting zinc finger protein 1-like involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2442827 (PMID:29487109)		 Ensembl
RGD		 PMID:29487109 GO_REF:0000107 NCBI chr 8:100,188,414...100,229,077
Ensembl chr 8:100,194,999...100,228,988 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO MGI:4458412 (PMID:24009529) RGD PMID:24009529 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Ptch1 patched 1 involved_in ISO (PMID:8681379) RGD PMID:8681379 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904) RGD PMID:17553904 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within ISO MGI:1919757 (PMID:29487109) RGD PMID:29487109 NCBI chr20:35,359,865...35,590,992
Ensembl chr20:35,359,863...35,590,415 		JBrowse link
G Tmem107 transmembrane protein 107 involved_in ISO (MGI:5432629|PMID:22698544) RGD PMID:22698544 MGI:5432629 NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO MGI:4129326 (PMID:21945076) RGD PMID:21945076 NCBI chr 9:92,073,622...92,110,427
Ensembl chr 9:92,073,640...92,108,977 		JBrowse link
notochord cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO MGI:2448472 (PMID:11287184) RGD PMID:11287184 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117 		JBrowse link
notochord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cobl cordon-bleu WH2 repeat protein involved_in ISO
IEA		 (MGI:76306|PMID:7586755)
GO_REF:0000107		 RGD
Ensembl		 PMID:7586755 GO_REF:0000107 MGI:76306 NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800 		JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593 		JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:76,647,302...76,765,989
Ensembl chr 5:76,647,429...76,765,174 		JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in ISO
IBA
IEA		 (MGI:86312|PMID:9119111)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:9119111 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:86312 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within ISO MGI:3612535 (PMID:16368929) RGD PMID:16368929 NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937 		JBrowse link
G Id3 inhibitor of DNA binding 3 involved_in ISO (MGI:73693|PMID:7655079) RGD PMID:7655079 MGI:73693 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (PMID:16831833) RGD PMID:16831833 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO MGI:1857063|MGI:3053092 (PMID:13837681), (PMID:15231714), (PMID:15550757), (PMID:17884984), (PMID:20197654), (PMID:8155581) RGD PMID:8155581 PMID:13837681 PMID:15231714 PMID:15550757 PMID:17884984 More... NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (MGI:86312|PMID:9119111) RGD PMID:9119111 MGI:86312 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (PMID:10385121) RGD PMID:10385121 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:1856185|MGI:1857760|MGI:3042264 (PMID:15384171), (PMID:8155581), (PMID:8293872) RGD PMID:8155581 PMID:8293872 PMID:15384171 NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
G Tead1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO MGI:103262|MGI:104904 (PMID:18332127) RGD PMID:18332127 NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369 		JBrowse link
G Tead2 TEA domain transcription factor 2 acts_upstream_of_or_within ISO MGI:101876|MGI:103262 (PMID:18332127) RGD PMID:18332127 NCBI chr 1:95,702,366...95,719,186
Ensembl chr 1:95,703,005...95,719,186 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101876|MGI:104904 (PMID:18332127)		 Ensembl
RGD		 PMID:18332127 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
notochord formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb2 crumbs cell polarity complex component 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5296388|PMID:22072575)		 CAFA
RGD		 PMID:22072575 GO_REF:0000024 MGI:5296388 NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294 		JBrowse link
G Efna1 ephrin A1 acts_upstream_of_or_within ISO MGI:95278 (PMID:11287184) RGD PMID:11287184 NCBI chr 2:174,681,676...174,689,061
Ensembl chr 2:174,681,682...174,690,866 		JBrowse link
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO MGI:103236|MGI:2448472 (PMID:11287184) RGD PMID:11287184 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:1856184 (PMID:7589801) RGD PMID:7589801 NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
notochord morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO MGI:2448472 (PMID:11287184) RGD PMID:11287184 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117 		JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within ISO MGI:5448825 (PMID:22949634) RGD PMID:22949634 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (PMID:16831833) RGD PMID:16831833 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16916379)		 Ensembl
RGD		 PMID:16916379 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Ppp1r35 protein phosphatase 1, regulatory subunit 35 involved_in ISO (MGI:6442352|PMID:32628936) RGD PMID:32628936 MGI:6442352 NCBI chr12:18,915,909...18,919,253 JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:98958 (PMID:25813538) RGD PMID:25813538 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101948 (PMID:25813538)		 Ensembl
RGD		 PMID:25813538 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
notochord regression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO MGI:95728 (PMID:10725236) RGD PMID:10725236 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:95727 (PMID:10725236) RGD PMID:10725236 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
olfactory placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou2f1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO MGI:98364 (PMID:17140559) RGD PMID:17140559 NCBI chr13:78,120,617...78,263,306
Ensembl chr13:78,130,685...78,263,363 		JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:3833798|PMID:19027001) RGD PMID:19027001 MGI:3833798 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:3833798|PMID:19027001) RGD PMID:19027001 MGI:3833798 NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:101898 (PMID:17140559) RGD PMID:17140559 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO MGI:5469314 (PMID:23129809) RGD PMID:23129809 NCBI chr 5:145,908,173...145,981,552
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861722 (PMID:16611695)		 Ensembl
RGD		 PMID:16611695 GO_REF:0000107 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1353450 (PMID:16611695)		 Ensembl
RGD		 PMID:16611695 GO_REF:0000107 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:84247|PMID:8951055)		 UniProt
RGD		 PMID:8951055 GO_REF:0000024 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
optic cup structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO		 GO_REF:0000024
(MGI:4439459|PMID:20150232)		 UniProt
RGD		 PMID:20150232 GO_REF:0000024 MGI:4439459 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
optic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six3 SIX homeobox 3 involved_in ISO (MGI:2136715|PMID:11458394) RGD PMID:11458394 MGI:2136715 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO		 GO_REF:0000024
(MGI:4439459|PMID:20150232)		 UniProt
RGD		 PMID:20150232 GO_REF:0000024 MGI:4439459 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:95517 (PMID:14623822) RGD PMID:14623822 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within ISO MGI:1099809|MGI:99604 (PMID:17601531) RGD PMID:17601531 NCBI chr 1:200,001,162...200,005,539
Ensembl chr 1:200,001,261...200,005,187 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:95517 (PMID:17601531) RGD PMID:17601531 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153790 (PMID:9435295) RGD PMID:9435295 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO MGI:1931124 (PMID:9620767) RGD PMID:9620767 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1932522|MGI:2385468 (PMID:18377888)		 UniProt
RGD		 PMID:18377888 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tcap titin-cap involved_in ISO (MGI:1314551|PMID:9817758) RGD PMID:9817758 MGI:1314551 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887 		JBrowse link
otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:2150426 (PMID:16916509) RGD PMID:16916509 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO MGI:3046793 (PMID:17074316) RGD PMID:17074316 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
otolith formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc44a4 solute carrier family 44, member 4 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr20:3,903,099...3,919,215
Ensembl chr20:3,903,099...3,919,215 		JBrowse link
otolith morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 acts_upstream_of_or_within ISO MGI:1856106 (PMID:5367369) RGD PMID:5367369 NCBI chr17:26,171,965...26,197,276
Ensembl chr17:26,172,018...26,197,251 		JBrowse link
G Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 acts_upstream_of_or_within ISO MGI:2443955 (PMID:24086156) RGD PMID:24086156 NCBI chr 4:127,130,899...127,230,956
Ensembl chr 4:127,130,898...127,231,513 		JBrowse link
G Lrig3 leucine-rich repeats and immunoglobulin-like domains 3 acts_upstream_of_or_within ISO MGI:107935 (PMID:24086156) RGD PMID:24086156 NCBI chr 7:61,816,313...61,866,275
Ensembl chr 7:61,816,342...61,866,481 		JBrowse link
G Ttc39c tetratricopeptide repeat domain 39C involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr18:3,768,802...3,887,932
Ensembl chr18:3,805,183...3,887,930 		JBrowse link
outer ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:2150426 (PMID:10471511) RGD PMID:10471511 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:3574787 (PMID:15630379) RGD PMID:15630379 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397 (PMID:17525797) RGD PMID:17525797 NCBI chr17:4,482,168...4,485,153 JBrowse link
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1346859 (PMID:18952847)		 Ensembl
RGD		 PMID:18952847 GO_REF:0000107 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (PMID:18952847) RGD PMID:18952847 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3626341 (PMID:16571658)		 Ensembl
RGD		 PMID:16571658 GO_REF:0000107 NCBI chr 3:61,575,447...61,594,393
Ensembl chr 3:61,575,447...61,594,347 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1932522|MGI:3619149 (PMID:16600992)		 UniProt
RGD		 PMID:16600992 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:3698161 (PMID:17127413) RGD PMID:17127413 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
P granule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pld6 phospholipase D family, member 6 involved_in ISO (MGI:4943609|PMID:21397848) RGD PMID:21397848 MGI:4943609 NCBI chr10:44,578,536...44,581,187
Ensembl chr10:44,577,675...44,581,077 		JBrowse link
G Stk31 serine threonine kinase 31 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:78,370,691...78,467,599
Ensembl chr 4:78,370,649...78,466,240 		JBrowse link
G Tdrd1 tudor domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871 		JBrowse link
G Tdrd5 tudor domain containing 5 involved_in IEA
IBA
ISO
ISS		 GO_REF:0000107
GO_REF:0000033
(MGI:4946318|PMID:21383078)
GO_REF:0000024		 Ensembl
GO_Central
RGD
UniProt		 PMID:21383078 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:4946318 NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319 		JBrowse link
G Tdrd6 tudor domain containing 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:17,344,033...17,359,348
Ensembl chr 9:17,344,026...17,359,344 		JBrowse link
G Tdrd7 tudor domain containing 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:60,238,742...60,312,548
Ensembl chr 5:60,238,678...60,312,544 		JBrowse link
G Tdrkh tudor and KH domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755 		JBrowse link
paraxial mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exoc4 exocyst complex component 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4975171 (PMID:9441674)		 Ensembl
RGD		 PMID:9441674 GO_REF:0000107 NCBI chr 4:61,807,706...62,584,316
Ensembl chr 4:61,807,761...62,585,723 		JBrowse link
G Foxc1 forkhead box C1 involved_in
acts_upstream_of_or_within		 ISO (MGI:3047050|PMID:15196959)
MGI:1347481 (PMID:11562355)		 RGD PMID:11562355 PMID:15196959 MGI:3047050 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1347466 (PMID:11562355) RGD PMID:11562355 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:96770 (PMID:10090727) RGD PMID:10090727 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:1857180 (PMID:16109169) RGD PMID:16109169 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:98504 (PMID:10090727)		 Ensembl
RGD		 PMID:10090727 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:98958 (PMID:25813538) RGD PMID:25813538 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101948 (PMID:25813538)		 Ensembl
RGD		 PMID:25813538 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
paraxial mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857865 (PMID:9106663) RGD PMID:9106663 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (PMID:9126297) RGD PMID:9126297 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in ISO UniProtKB:P23359 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO UniProtKB:P49003 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO
IEA		 (MGI:3056036|PMID:15466159)
GO_REF:0000107		 RGD
Ensembl		 PMID:15466159 GO_REF:0000107 MGI:3056036 NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of
acts_upstream_of_or_within		 ISO MGI:98958 (PMID:19056682)
MGI:98958 (PMID:19795512)		 RGD PMID:19056682 PMID:19795512 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:3027664|PMID:14701881), (MGI:4837019|PMID:20890042), (MGI:5298073|PMID:21311046) RGD PMID:14701881 PMID:20890042 PMID:21311046 MGI:3027664 MGI:4837019 MGI:5298073 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO MGI:2155441 (PMID:9030684) RGD PMID:9030684 NCBI chr 6:14,533,870...14,613,348
Ensembl chr 6:14,533,360...14,611,107 		JBrowse link
G Tbx20 T-box transcription factor 20 involved_in ISO (MGI:3579960|PMID:15901664) RGD PMID:15901664 MGI:3579960 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1298218 (PMID:19795512) RGD PMID:19795512 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
pharyngeal arch artery morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrf4 adhesion G protein-coupled receptor F4 acts_upstream_of_or_within ISO MGI:2182928 (PMID:28806758) RGD PMID:28806758 NCBI chr 9:18,272,050...18,303,219
Ensembl chr 9:18,272,050...18,303,217 		JBrowse link
G Adgrf5 adhesion G protein-coupled receptor F5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1925499 (PMID:28806758)		 Ensembl
RGD		 PMID:28806758 GO_REF:0000107 NCBI chr 9:17,517,596...17,624,107
Ensembl chr 9:17,520,009...17,623,968 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3039210|PMID:15070745)		 Ensembl
RGD		 PMID:15070745 GO_REF:0000107 MGI:3039210 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO (MGI:3040576|PMID:15073157) RGD PMID:15073157 MGI:3040576 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in
NOT|involved_in		 ISO (MGI:2429424|PMID:12441304)
(MGI:3851675|PMID:19409885)		 RGD PMID:12441304 PMID:19409885 MGI:2429424 MGI:3851675 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Edn1 endothelin 1 involved_in ISO MGI:1857637|MGI:3773698|MGI:4867385 (PMID:23933587) RGD PMID:23933587 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO		 GO_REF:0000107
MGI:1857473|MGI:1857637|MGI:2687362|MGI:3773698|MGI:4867385 (PMID:23933587), (PMID:31219639)		 Ensembl
RGD		 PMID:23933587 PMID:31219639 GO_REF:0000107 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Folr1 folate receptor alpha involved_in ISO (MGI:3721767|PMID:17286298) RGD PMID:17286298 MGI:3721767 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4453944|PMID:20122914)		 Ensembl
RGD		 PMID:20122914 GO_REF:0000107 MGI:4453944 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within ISO (PMID:32203821) RGD PMID:32203821 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Nog noggin involved_in ISO
IEA		 (MGI:3783944|PMID:17218603)
GO_REF:0000107		 RGD
Ensembl		 PMID:17218603 GO_REF:0000107 MGI:3783944 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:3605892 (PMID:23319608) RGD PMID:23319608 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (MGI:3609313|PMID:11390347) RGD PMID:11390347 MGI:3609313 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
pharyngeal system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO MGI:2386570|MGI:2651395 (PMID:17078885) RGD PMID:17078885 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO UniProtKB:P23359 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO UniProtKB:P49003 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158947 (PMID:12950083)		 Ensembl
RGD		 PMID:12950083 GO_REF:0000107 NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:102780|MGI:98493|MGI:99604 (PMID:21364285) RGD PMID:21364285 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:102780|MGI:109344|MGI:98493 (PMID:21364285) RGD PMID:21364285 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Foxi3 forkhead box I3 involved_in ISO (PMID:37041148)
(MGI:5559050|PMID:24650709), (MGI:7463349|PMID:37041148)		 RGD PMID:24650709 PMID:37041148 MGI:5559050 MGI:7463349 NCBI chr 4:102,933,487...102,937,655
Ensembl chr 4:102,933,409...102,937,655 		JBrowse link
G Gata3 GATA binding protein 3 involved_in ISO (MGI:3832106|PMID:18955134) RGD PMID:18955134 MGI:3832106 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Hoxa2 homeobox A2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25889273)		 Ensembl
RGD		 PMID:25889273 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in ISO
IEA		 UniProtKB:Q02248 (MGI:3829137|PMID:17519333)
GO_REF:0000107		 RGD
Ensembl		 PMID:17519333 GO_REF:0000107 MGI:3829137 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97351 (PMID:11390666)		 Ensembl
RGD		 PMID:11390666 GO_REF:0000107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Nkx2-6 NK2 homeobox 6 involved_in
acts_upstream_of_or_within		 ISO (MGI:1195840|PMID:9486544), (MGI:1267297|PMID:9621431), (MGI:3828420|PMID:9545560)
MGI:97350 (PMID:11390666)		 RGD PMID:9486544 PMID:9545560 PMID:9621431 PMID:11390666 MGI:1195840 MGI:1267297 MGI:3828420 NCBI chr15:44,443,151...44,447,248
Ensembl chr15:44,443,101...44,447,247 		JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (MGI:1267297|PMID:9621431) RGD PMID:9621431 MGI:1267297 NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441 		JBrowse link
G Plxna2 plexin A2 involved_in ISO (MGI:4355631|PMID:19666519) RGD PMID:19666519 MGI:4355631 NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979 		JBrowse link
G Ptch1 patched 1 involved_in ISO (PMID:8681379), (PMID:8981943) RGD PMID:8681379 PMID:8981943 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Ripply3 ripply transcriptional repressor 3 involved_in ISO (MGI:4879036|PMID:21177346) RGD PMID:21177346 MGI:4879036 NCBI chr11:33,648,471...33,656,587
Ensembl chr11:33,648,486...33,656,584 		JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:3624596|PMID:16530750)
MGI:109344|MGI:98493|MGI:99604 (PMID:21364285)		 RGD PMID:16530750 PMID:21364285 MGI:3624596 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:3624596|PMID:16530750) RGD PMID:16530750 MGI:3624596 NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:102780|MGI:109344|MGI:3046793|MGI:99604 (PMID:16141220), (PMID:21364285)
(MGI:4879036|PMID:21177346)
(PMID:14585638)		 UniProt
RGD		 PMID:14585638 PMID:16141220 PMID:21177346 PMID:21364285 GO_REF:0000024 MGI:4879036 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:3487212 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2386570|MGI:2388050 (PMID:17078885)		 Ensembl
RGD		 PMID:17078885 GO_REF:0000107 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
planar cell polarity pathway involved in gastrula mediolateral intercalation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:98958 (PMID:25813538) RGD PMID:25813538 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101948 (PMID:25813538)		 Ensembl
RGD		 PMID:25813538 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO MGI:1918711|MGI:2135272 (PMID:20704721) RGD PMID:20704721 NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000118
MGI:106613 (PMID:16571627)
GO_REF:0000033		 TreeGrafter
RGD
GO_Central		 PMID:16571627 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2135272|MGI:2429760|MGI:94941 (PMID:16571627)		 GO_Central
RGD		 PMID:16571627 GO_REF:0000033 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820 		JBrowse link
G Dvl3 dishevelled segment polarity protein 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2135272 (PMID:19008950)		 GO_Central
RGD		 PMID:19008950 GO_REF:0000033 NCBI chr11:80,365,446...80,382,641
Ensembl chr11:80,366,117...80,382,462 		JBrowse link
G Fzd1 frizzled class receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1888513|MGI:2135272 (PMID:20940229)		 Ensembl
RGD		 PMID:20940229 GO_REF:0000107 NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643
Ensembl chr 4:29,310,091...29,312,643 		JBrowse link
G Fzd2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1196625|MGI:2135272 (PMID:20940229)		 Ensembl
RGD		 PMID:20940229 GO_REF:0000107 NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334 		JBrowse link
G Grhl3 grainyhead-like transcription factor 3 acts_upstream_of_or_within ISO MGI:2135272 (PMID:20643356) RGD PMID:20643356 NCBI chr 5:147,774,161...147,806,291
Ensembl chr 5:147,774,160...147,806,160 		JBrowse link
G Ptk7 protein tyrosine kinase 7 acts_upstream_of_or_within ISO MGI:1100883|MGI:2135272 (PMID:20704721) RGD PMID:20704721 NCBI chr 9:14,352,155...14,418,473
Ensembl chr 9:14,351,202...14,418,494 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:108078|MGI:1860298|MGI:2135272 (PMID:18257070)		 Ensembl
RGD		 PMID:18257070 GO_REF:0000107 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:1860298|MGI:2135272|MGI:892014 (PMID:18257070) RGD PMID:18257070 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Sfrp5 secreted frizzled-related protein 5 acts_upstream_of_or_within ISO MGI:108078|MGI:2135272|MGI:892014 (PMID:18257070) RGD PMID:18257070 NCBI chr 1:241,006,762...241,011,224
Ensembl chr 1:241,006,762...241,011,224 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:106613|MGI:108078|MGI:108100|MGI:1100883|MGI:1196625|MGI:1857642|MGI:1860298|MGI:1888513|MGI:1918711|MGI:2655333|MGI:892014 (PMID:16571627), (PMID:18257070), (PMID:19008950), (PMID:20643356), (PMID:20704721), (PMID:20940229) RGD PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 More... NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857617 (PMID:19056682)		 Ensembl
RGD		 PMID:19056682 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857617 (PMID:19056682)		 Ensembl
RGD		 PMID:19056682 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO UniProtKB:Q86SQ0|UniProtKB:Q86UU1 (PMID:23940118) RGD PMID:23940118 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146 		JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731 		JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325 		JBrowse link
G Phldb1 pleckstrin homology-like domain, family B, member 1 involved_in ISO
IEA		 UniProtKB:Q7Z460|UniProtKB:Q86SQ0 (PMID:23940118)
GO_REF:0000107		 RGD
Ensembl		 PMID:23940118 GO_REF:0000107 NCBI chr 8:45,003,543...45,051,541
Ensembl chr 8:45,003,538...45,051,522 		JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO UniProtKB:Q7Z460|UniProtKB:Q86UU1 (PMID:23940118) RGD PMID:23940118 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467 		JBrowse link
positive regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 involved_in ISO (PMID:10654605) RGD PMID:10654605 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:10654605) RGD PMID:10654605 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:10654605) RGD PMID:10654605 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
positive regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amot angiomotin acts_upstream_of_or_within ISO MGI:2656627 (PMID:12676095) RGD PMID:12676095 NCBI chr  X:108,982,399...109,041,265
Ensembl chr  X:108,984,022...109,041,272 		JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6238824|PMID:20574042) RGD PMID:20574042 MGI:6238824 NCBI chr 3:156,018,056...156,033,983
Ensembl chr 3:156,018,053...156,070,074 		JBrowse link
G Cfl1 cofilin 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6296386|PMID:25208553)		 UniProt
RGD		 PMID:25208553 GO_REF:0000024 MGI:6296386 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587 		JBrowse link
G Foxa2 forkhead box A2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2157654|PMID:11291865)		 UniProt
RGD		 PMID:11291865 GO_REF:0000024 MGI:2157654 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in ISS
ISO		 GO_REF:0000024
(MGI:6467697|PMID:29125140)		 UniProt
RGD		 PMID:29125140 GO_REF:0000024 MGI:6467697 NCBI chr 8:73,842,344...73,844,248
Ensembl chr 8:73,842,344...73,844,248 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2157654|PMID:11291865)		 UniProt
RGD		 PMID:11291865 GO_REF:0000024 MGI:2157654 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 involved_in ISO (MGI:5430272|PMID:22357545) RGD PMID:22357545 MGI:5430272 NCBI chr 1:67,778,037...67,810,941
Ensembl chr 1:67,777,948...68,023,736 		JBrowse link
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 involved_in ISO
IBA
IEA		 (MGI:4355296|PMID:19131575)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:19131575 GO_REF:0000033 GO_REF:0000118 MGI:4355296 NCBI chr 4:124,610,216...124,666,813
Ensembl chr 4:124,608,960...124,661,902 		JBrowse link
G Otx2 orthodenticle homeobox 2 involved_in ISO (MGI:2157654|PMID:11291865) RGD PMID:11291865 MGI:2157654 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Plcb1 phospholipase C beta 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:2136696|PMID:11464583)		 Ensembl
RGD		 PMID:11464583 GO_REF:0000107 MGI:2136696 NCBI chr 3:122,059,988...122,772,896
Ensembl chr 3:122,060,031...122,772,869 		JBrowse link
G Rbm19 RNA binding motif protein 19 involved_in ISO (MGI:3608543|PMID:16027046) RGD PMID:16027046 MGI:3608543 NCBI chr12:36,365,775...36,451,033
Ensembl chr12:36,365,772...36,450,993 		JBrowse link
G Tle6 TLE family member 6, subcortical maternal complex member involved_in ISO (MGI:6296386|PMID:25208553) RGD PMID:25208553 MGI:6296386 NCBI chr 7:8,107,050...8,118,639
Ensembl chr 7:8,107,207...8,118,639 		JBrowse link
G Utp25 UTP25 small subunit processome component involved_in ISS
ISO		 GO_REF:0000024
(MGI:6285032|PMID:29262616)		 UniProt
RGD		 PMID:29262616 GO_REF:0000024 MGI:6285032 NCBI chr13:104,630,390...104,651,681
Ensembl chr13:104,630,391...104,651,662 		JBrowse link
G Zbed3 zinc finger, BED-type containing 3 involved_in ISO (MGI:6467696|PMID:28992324) RGD PMID:28992324 MGI:6467696 NCBI chr 2:26,587,620...26,600,177
Ensembl chr 2:26,587,572...26,600,386 		JBrowse link
positive regulation of endodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Macroh2a1 macroH2A.1 histone involved_in ISO (PMID:23595991) RGD PMID:23595991 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16908534)		 Ensembl
RGD		 PMID:16908534 GO_REF:0000107 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO (PMID:17940068) RGD PMID:17940068 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
positive regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2157654|PMID:11291865)		 UniProt
RGD		 PMID:11291865 GO_REF:0000024 MGI:2157654 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2157654|PMID:11291865)		 UniProt
RGD		 PMID:11291865 GO_REF:0000024 MGI:2157654 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21281489)		 UniProt
Ensembl
RGD		 PMID:21281489 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO (MGI:5009762|PMID:21281489) RGD PMID:21281489 MGI:5009762 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Otx2 orthodenticle homeobox 2 involved_in ISO (MGI:2157654|PMID:11291865) RGD PMID:11291865 MGI:2157654 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:33,169,415...33,174,896
Ensembl chr10:33,169,169...33,174,975 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:1343990|PMID:10477299) RGD PMID:10477299 MGI:1343990 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626 		JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in ISO (MGI:3531238|PMID:15489520) RGD PMID:15489520 MGI:3531238 NCBI chr 1:149,895,097...151,263,315
Ensembl chr 1:150,780,381...151,259,144 		JBrowse link
positive regulation of mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir1 microRNA 1 involved_in ISO (PMID:23939491) RGD PMID:23939491 NCBI chr18:1,887,537...1,887,623 JBrowse link
G Mir1b microRNA 1b involved_in ISO (PMID:23939491) RGD PMID:23939491 NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201 		JBrowse link
positive regulation of mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 involved_in ISO (PMID:30599359) RGD PMID:30599359 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Mir150 microRNA 150 involved_in ISO (PMID:23765923) RGD PMID:23765923 NCBI chr 1:95,605,024...95,605,108
Ensembl chr 1:95,605,024...95,605,108 		JBrowse link
G Mir200c microRNA 200c involved_in ISO (PMID:23765923) RGD PMID:23765923 NCBI chr 4:157,523,679...157,523,747 JBrowse link
positive regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a Wnt family member 3A involved_in ISO (PMID:20559569) RGD PMID:20559569 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
positive regulation of mitotic cell cycle, embryonic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4354447|PMID:19609448)		 Ensembl
RGD		 PMID:19609448 GO_REF:0000107 MGI:4354447 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Pdgfb platelet derived growth factor subunit B acts_upstream_of_or_within ISO MGI:87859|MGI:99511 (PMID:18827006) RGD PMID:18827006 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
positive regulation of myotome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmrt2 doublesex and mab-3 related transcription factor 2 acts_upstream_of_or_within ISO MGI:3512139 (PMID:16387292) RGD PMID:16387292 NCBI chr 1:223,317,543...223,324,131
Ensembl chr 1:223,317,642...223,324,131 		JBrowse link
positive regulation of otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stox1 storkhead box 1 involved_in ISO (MGI:5635320|PMID:25677106) RGD PMID:25677106 MGI:5635320 NCBI chr20:30,598,284...30,666,371
Ensembl chr20:30,598,168...30,666,939 		JBrowse link
positive regulation of sclerotome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO		 GO_REF:0000107
(PMID:10654605)		 Ensembl
RGD		 PMID:10654605 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
positive regulation of trophectodermal cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf2 colony stimulating factor 2 involved_in ISO (PMID:16792532), (PMID:24520418) RGD PMID:16792532 PMID:24520418 NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199 		JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO (PMID:15901638) RGD PMID:15901638 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA		 (PMID:24508636)
GO_REF:0000107		 RGD
Ensembl		 PMID:24508636 GO_REF:0000107 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO (MGI:3822373|PMID:19112489) RGD PMID:19112489 MGI:3822373 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:8657307)		 UniProt
Ensembl
RGD		 PMID:8657307 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:5009396 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:5009396 NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2177762 (PMID:16364283) RGD PMID:16364283 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) RGD PMID:17473173 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
primitive erythrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata1 GATA binding protein 1 acts_upstream_of_or_within ISO MGI:3038080 (PMID:9139715) RGD PMID:9139715 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Hscb HscB mitochondrial iron-sulfur cluster co-chaperone involved_in ISO (MGI:6438356|PMID:32634119) RGD PMID:32634119 MGI:6438356 NCBI chr12:45,821,527...45,831,902
Ensembl chr12:45,821,555...45,831,909 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:3611933 (PMID:16287714) RGD PMID:16287714 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:2383985 (PMID:14729577) RGD PMID:14729577 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 acts_upstream_of_or_within ISO MGI:1857554 (PMID:9553047) RGD PMID:9553047 NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591 		JBrowse link
primitive hemopoiesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hscb HscB mitochondrial iron-sulfur cluster co-chaperone involved_in ISO (MGI:6438356|PMID:32634119) RGD PMID:32634119 MGI:6438356 NCBI chr12:45,821,527...45,831,902
Ensembl chr12:45,821,555...45,831,909 		JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1929004 (PMID:19786569)		 Ensembl
RGD		 PMID:19786569 GO_REF:0000107 NCBI chr 7:66,053,209...66,323,292
Ensembl chr 7:66,052,345...66,323,233 		JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO MGI:1928487 (PMID:19786569) RGD PMID:19786569 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744 		JBrowse link
G Thoc5 THO complex subunit 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4943620|PMID:20051105)		 UniProt
RGD		 PMID:20051105 GO_REF:0000024 MGI:4943620 NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718 		JBrowse link
primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ets2 ETS proto-oncogene 2, transcription factor acts_upstream_of_or_within ISO MGI:1891557 (PMID:23552073) RGD PMID:23552073 NCBI chr11:35,021,536...35,038,322
Ensembl chr11:35,021,596...35,038,319 		JBrowse link
G Foxa2 forkhead box A2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857725 (PMID:11291865)		 UniProt
RGD		 PMID:11291865 GO_REF:0000024 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within ISO MGI:3612535 (PMID:16368929) RGD PMID:16368929 NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:4999724|MGI:97359 (PMID:21445260) RGD PMID:21445260 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857502|MGI:1857848 (PMID:11291865)		 UniProt
RGD		 PMID:11291865 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (PMID:19795512) RGD PMID:19795512 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:96086 (PMID:21445260) RGD PMID:21445260 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:1857502 (PMID:11291865) RGD PMID:11291865 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:4356107 (PMID:19706528)		 Ensembl
RGD		 PMID:19706528 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2158696 (PMID:9799237) RGD PMID:9799237 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1298218 (PMID:19795512)		 Ensembl
RGD		 PMID:19795512 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:2180720 (PMID:16397896) RGD PMID:16397896 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
proepicardium cell migration involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3796818|PMID:18448090)		 UniProt
RGD		 PMID:18448090 GO_REF:0000024 MGI:3796818 NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841 		JBrowse link
prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1857137 (PMID:11401393)		 Ensembl
RGD		 PMID:11401393 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:88064 (PMID:12941620) RGD PMID:12941620 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (PMID:16707121) RGD PMID:16707121 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1862000 (PMID:18028901)		 Ensembl
RGD		 PMID:18028901 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Shh sonic hedgehog signaling molecule NOT|acts_upstream_of_or_within ISO MGI:88064 (PMID:15013801) RGD PMID:15013801 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934269 (PMID:11106548) RGD PMID:11106548 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
regulation of blastocyst development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO MGI:5788002 (PMID:29593216) RGD PMID:29593216 NCBI chr 5:125,254,963...126,534,367
Ensembl chr 5:125,254,956...126,534,367 		JBrowse link
G Klf4 KLF transcription factor 4 acts_upstream_of_or_within ISO MGI:6392146 (PMID:29593216) RGD PMID:29593216 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602 		JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO (PMID:29593216) RGD PMID:29593216 NCBI chr 7:114,619,509...114,648,850
Ensembl chr 7:114,619,508...114,648,761 		JBrowse link
G Ttll4 tubulin tyrosine ligase like 4 acts_upstream_of_or_within ISO (PMID:29593216) RGD PMID:29593216 NCBI chr 9:76,221,659...76,258,219
Ensembl chr 9:76,221,796...76,251,301 		JBrowse link
regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 involved_in ISO (PMID:19219068) RGD PMID:19219068 NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924 		JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1929004 (PMID:24595170)		 Ensembl
RGD		 PMID:24595170 GO_REF:0000107 NCBI chr 7:66,053,209...66,323,292
Ensembl chr 7:66,052,345...66,323,233 		JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO MGI:1928487 (PMID:24595170) RGD PMID:24595170 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744 		JBrowse link
regulation of cell migration involved in somitogenic axis elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp2r3a protein phosphatase 2, regulatory subunit B'', alpha involved_in ISO UniProtKB:A0A803JG39 (PMID:15687260) RGD PMID:15687260 NCBI chr 8:101,703,512...101,841,530
Ensembl chr 8:101,704,778...101,841,502 		JBrowse link
regulation of embryonic cell shape term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Septin7 septin 7 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113 		JBrowse link
regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3703386|PMID:16287848)		 UniProt
Ensembl
RGD		 PMID:16287848 GO_REF:0000024 GO_REF:0000107 MGI:3703386 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5427564|PMID:22422825)		 UniProt
RGD		 PMID:22422825 GO_REF:0000024 MGI:5427564 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Dr1 down-regulator of transcription 1 involved_in ISO
IEA		 (MGI:3835889|PMID:19103755)
GO_REF:0000107		 RGD
Ensembl		 PMID:19103755 GO_REF:0000107 MGI:3835889 NCBI chr14:1,458,223...1,469,578
Ensembl chr14:1,458,223...1,469,638 		JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 involved_in ISO (MGI:3575040|PMID:15774718) RGD PMID:15774718 MGI:3575040 NCBI chr 3:7,580,680...7,729,046
Ensembl chr 3:7,580,683...7,729,007 		JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO (PMID:31761678) RGD PMID:31761678 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Ino80e INO80 complex subunit E involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469 		JBrowse link
G Insr insulin receptor involved_in ISO (PMID:7693131) RGD PMID:7693131 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Kat14 lysine acetyltransferase 14 involved_in ISO (MGI:3835889|PMID:19103755) RGD PMID:19103755 MGI:3835889 NCBI chr 3:131,736,430...131,781,732
Ensembl chr 3:131,736,549...131,781,706 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (MGI:3835889|PMID:19103755) RGD PMID:19103755 MGI:3835889 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Lama1 laminin subunit alpha 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478 		JBrowse link
G Lama2 laminin subunit alpha 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:17,672,675...18,320,641
Ensembl chr 1:17,672,536...18,320,530 		JBrowse link
G Lama3 laminin subunit alpha 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353 		JBrowse link
G Lama4 laminin subunit alpha 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:42,392,268...42,533,347
Ensembl chr20:42,392,268...42,533,347 		JBrowse link
G Lama5 laminin subunit alpha 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451 		JBrowse link
G Mbip MAP3K12 binding inhibitory protein 1 involved_in ISO (MGI:3835889|PMID:19103755) RGD PMID:19103755 MGI:3835889 NCBI chr 6:73,808,133...73,825,394
Ensembl chr 6:73,808,133...73,825,374 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 acts_upstream_of_or_within ISO MGI:1858732 (PMID:15087497) RGD PMID:15087497 NCBI chr 3:60,594,239...60,621,712
Ensembl chr 3:60,594,242...60,621,737 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:19242925) RGD PMID:19242925 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Noct nocturnin involved_in ISS
ISO		 GO_REF:0000024
(MGI:5494762|PMID:23449310)		 UniProt
RGD		 PMID:23449310 GO_REF:0000024 MGI:5494762 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400 		JBrowse link
G Phlda2 pleckstrin homology-like domain, family A, member 2 acts_upstream_of_or_within ISO (PMID:19884348) RGD PMID:19884348 NCBI chr 1:198,696,897...198,699,292
Ensembl chr 1:198,696,897...198,697,836 		JBrowse link
G Rab14 RAB14, member RAS oncogene family involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:4889011|PMID:21238925)		 UniProt
Ensembl
RGD		 PMID:21238925 GO_REF:0000024 GO_REF:0000107 MGI:4889011 NCBI chr 3:18,501,953...18,523,253
Ensembl chr 3:18,501,963...18,523,172 		JBrowse link
G Racgap1 Rac GTPase-activating protein 1 involved_in ISO (MGI:1934490|PMID:11287179) RGD PMID:11287179 MGI:1934490 NCBI chr 7:130,750,936...130,780,891
Ensembl chr 7:130,750,936...130,780,831 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Sgf29 SAGA complex associated factor 29 involved_in ISO
IEA		 (MGI:3835889|PMID:19103755)
GO_REF:0000107		 RGD
Ensembl		 PMID:19103755 GO_REF:0000107 MGI:3835889 NCBI chr 1:181,238,458...181,271,931
Ensembl chr 1:181,238,468...181,274,781 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in ISO (MGI:2178090|PMID:11973269) RGD PMID:11973269 MGI:2178090 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Tada2a transcriptional adaptor 2A involved_in ISO
IEA		 (MGI:3835889|PMID:19103755)
GO_REF:0000107		 RGD
Ensembl		 PMID:19103755 GO_REF:0000107 MGI:3835889 NCBI chr10:68,966,502...69,014,149
Ensembl chr10:68,966,502...69,014,105 		JBrowse link
G Tada3 transcriptional adaptor 3 involved_in ISO (MGI:3835889|PMID:19103755) RGD PMID:19103755 MGI:3835889 NCBI chr 4:146,510,213...146,521,975
Ensembl chr 4:146,510,246...146,521,590 		JBrowse link
G Tdg thymine-DNA glycosylase involved_in ISO (MGI:5141157|PMID:21722948), (MGI:5487523|PMID:21278727) RGD PMID:21278727 PMID:21722948 MGI:5141157 MGI:5487523 NCBI chr 7:21,077,853...21,097,617
Ensembl chr 7:21,077,853...21,097,567 		JBrowse link
G Tfpt TCF3 fusion partner involved_in IEA
ISO		 GO_REF:0000107
(MGI:5638510|PMID:23979016)		 Ensembl
RGD		 PMID:23979016 GO_REF:0000107 MGI:5638510 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5303027|PMID:22028794)		 UniProt
Ensembl
RGD		 PMID:22028794 GO_REF:0000024 GO_REF:0000107 MGI:5303027 NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Wdr5 WD repeat domain 5 involved_in ISO
IEA		 (MGI:3835889|PMID:19103755)
GO_REF:0000107		 RGD
Ensembl		 PMID:19103755 GO_REF:0000107 MGI:3835889 NCBI chr 3:10,836,964...10,856,682
Ensembl chr 3:10,837,025...10,856,671 		JBrowse link
G Yeats2 YEATS domain containing 2 involved_in ISO (MGI:3835889|PMID:19103755) RGD PMID:19103755 MGI:3835889 NCBI chr11:80,743,134...80,829,253
Ensembl chr11:80,743,134...80,829,208 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zzz3 zinc finger, ZZ-type containing 3 involved_in ISO (MGI:3835889|PMID:19103755) RGD PMID:19103755 MGI:3835889 NCBI chr 2:241,330,366...241,397,308
Ensembl chr 2:241,331,022...241,397,307 		JBrowse link
regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:20559569) RGD PMID:20559569 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:4440619|MGI:4440621 (PMID:19966784) RGD PMID:19966784 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146 		JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (MGI:5700252|PMID:26496195) RGD PMID:26496195 MGI:5700252 NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294 		JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158682 (PMID:7958910)		 Ensembl
RGD		 PMID:7958910 GO_REF:0000107 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:1194497|MGI:1915299 (PMID:20040491) RGD PMID:20040491 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Phldb1 pleckstrin homology-like domain, family B, member 1 involved_in ISO
IEA		 (PMID:23940118)
GO_REF:0000107		 RGD
Ensembl		 PMID:23940118 GO_REF:0000107 NCBI chr 8:45,003,543...45,051,541
Ensembl chr 8:45,003,538...45,051,522 		JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467 		JBrowse link
G Poglut1 protein O-glucosyltransferase 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5700252|PMID:26496195)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:26496195 GO_REF:0000024 GO_REF:0000107 MGI:5700252 NCBI chr11:62,198,600...62,226,446
Ensembl chr11:62,198,513...62,226,434 		JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 acts_upstream_of_or_within ISO MGI:1915299|MGI:97359 (PMID:20040491) RGD PMID:20040491 NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802 		JBrowse link
G Tgif2 TGFB-induced factor homeobox 2 acts_upstream_of_or_within ISO MGI:1194497|MGI:97359 (PMID:20040491) RGD PMID:20040491 NCBI chr 3:145,333,152...145,348,599
Ensembl chr 3:145,333,418...145,348,596 		JBrowse link
regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf207 ring finger protein 207 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:162,815,351...162,828,325
Ensembl chr 5:162,815,357...162,828,375 		JBrowse link
regulation of lateral mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:95522 (PMID:16943278) RGD PMID:16943278 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:1338938 (PMID:16943278) RGD PMID:16943278 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
regulation of mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1347470 (PMID:17881493)		 Ensembl
RGD		 PMID:17881493 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
regulation of mitotic cell cycle, embryonic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G E4f1 E4F transcription factor 1 acts_upstream_of_or_within ISO MGI:3050154 (PMID:15226446) RGD PMID:15226446 NCBI chr10:13,471,478...13,495,018
Ensembl chr10:13,474,456...13,485,974 		JBrowse link
regulation of neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A NOT|involved_in ISO (MGI:3040576|PMID:15073157) RGD PMID:15073157 MGI:3040576 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
regulation of primitive erythrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata1 GATA binding protein 1 acts_upstream_of_or_within ISO MGI:95662 (PMID:14504093) RGD PMID:14504093 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:95661 (PMID:14504093) RGD PMID:14504093 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Kdm1a lysine demethylase 1A involved_in ISO (MGI:5284774|PMID:17707228) RGD PMID:17707228 MGI:5284774 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
regulation of prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within ISO MGI:1099809 (PMID:12941620) RGD PMID:12941620 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:12221011), (PMID:18393306)		 Ensembl
RGD		 PMID:12221011 PMID:18393306 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
regulation of somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdx1 caudal type homeo box 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5301472|PMID:22015720)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:22015720 GO_REF:0000024 GO_REF:0000107 MGI:5301472 NCBI chr18:54,472,587...54,490,913
Ensembl chr18:54,473,444...54,490,814 		JBrowse link
G Cdx2 caudal type homeo box 2 involved_in ISO (MGI:5301472|PMID:22015720) RGD PMID:22015720 MGI:5301472 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5689216|PMID:26114479)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:26114479 GO_REF:0000024 GO_REF:0000107 MGI:5689216 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 acts_upstream_of_or_within ISO MGI:3512139|MGI:97487 (PMID:17974128) RGD PMID:17974128 NCBI chr 1:223,317,543...223,324,131
Ensembl chr 1:223,317,642...223,324,131 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19061953)
MGI:1933734 (PMID:19779553)
GO_REF:0000107		 RGD
Ensembl		 PMID:19061953 PMID:19779553 GO_REF:0000107 NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1857230 (PMID:7789282) RGD PMID:7789282 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO MGI:1330307|MGI:1856173 (PMID:17974128) RGD PMID:17974128 NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042 		JBrowse link
regulation of spongiotrophoblast cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrk Nik related kinase acts_upstream_of_or_within ISO MGI:5292103 (PMID:21715335) RGD PMID:21715335 NCBI chr  X:102,365,765...102,462,957
Ensembl chr  X:102,365,765...102,459,657 		JBrowse link
G Phlda2 pleckstrin homology-like domain, family A, member 2 acts_upstream_of_or_within ISO MGI:2181542 (PMID:26476147) RGD PMID:26476147 NCBI chr 1:198,696,897...198,699,292
Ensembl chr 1:198,696,897...198,697,836 		JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in IDA PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
retinoic acid receptor signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1100864|MGI:1857891 (PMID:15889094) RGD PMID:15889094 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
roof plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO MGI:2386906 (PMID:10693795) RGD PMID:10693795 NCBI chr 6:31,171,495...31,182,484
Ensembl chr 6:31,178,119...31,182,447 		JBrowse link
rostrocaudal neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in ISO
IEA		 (PMID:20093472)
GO_REF:0000107		 RGD
Ensembl		 PMID:20093472 GO_REF:0000107 NCBI chr  X:10,183,983...10,210,948
Ensembl chr  X:10,183,068...10,210,918 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:1857632 (PMID:8887324) RGD PMID:8887324 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:2179440 (PMID:19913509) RGD PMID:19913509 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
sclerotome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Meox1 mesenchyme homeobox 1 involved_in ISO (MGI:3038036|PMID:15024065), (MGI:4360150|PMID:19520072) RGD PMID:15024065 PMID:19520072 MGI:3038036 MGI:4360150 NCBI chr10:86,818,450...86,837,563
Ensembl chr10:86,818,478...86,837,660 		JBrowse link
G Pax1 paired box 1 involved_in ISO (MGI:72077|PMID:7743923) RGD PMID:7743923 MGI:72077 NCBI chr 3:134,792,330...134,801,637
Ensembl chr 3:134,789,182...134,801,636 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:72077|PMID:7743923) RGD PMID:7743923 MGI:72077 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO (MGI:1349347|PMID:10654605) RGD PMID:10654605 MGI:1349347 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
semicircular canal formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
semicircular canal fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (PMID:15765517) RGD PMID:15765517 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
semicircular canal morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:98493 (PMID:19855134) RGD PMID:19855134 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1857803 (PMID:10072433) RGD PMID:10072433 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:95517 (PMID:17601531) RGD PMID:17601531 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within ISO MGI:1099809 (PMID:17601531) RGD PMID:17601531 NCBI chr 1:200,001,162...200,005,539
Ensembl chr 1:200,001,261...200,005,187 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (PMID:11784868) RGD PMID:11784868 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2444748 (PMID:19855134)		 UniProt
RGD		 PMID:19855134 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO (MGI:6710296|PMID:33795231) RGD PMID:33795231 MGI:6710296 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861230 (PMID:21980308)		 Ensembl
RGD		 PMID:21980308 GO_REF:0000107 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:2442827|MGI:95729 (PMID:17395647), (PMID:20159594) RGD PMID:17395647 PMID:20159594 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:2442827|MGI:95728 (PMID:17395647), (PMID:20159594) RGD PMID:17395647 PMID:20159594 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within ISO MGI:2443231 (PMID:22689656) RGD PMID:22689656 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within ISO MGI:95728|MGI:95729 (PMID:20159594) RGD PMID:20159594 NCBI chr20:35,359,865...35,590,992
Ensembl chr20:35,359,863...35,590,415 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:3664273 (PMID:19223390) RGD PMID:19223390 NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within ISO MGI:1932386|MGI:5315748 (PMID:22689656) RGD PMID:22689656 NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288 		JBrowse link
somite development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frzb frizzled-related protein involved_in ISO (MGI:1349347|PMID:10654605) RGD PMID:10654605 MGI:1349347 NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (MGI:5142377|PMID:11517919) RGD PMID:11517919 MGI:5142377 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Loxl3 lysyl oxidase-like 3 involved_in ISO (MGI:5825413|PMID:26954549) RGD PMID:26954549 MGI:5825413 NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466 		JBrowse link
G Meox1 mesenchyme homeobox 1 involved_in ISO
IBA		 (MGI:4360150|PMID:19520072)
GO_REF:0000033		 RGD
GO_Central		 PMID:19520072 GO_REF:0000033 MGI:4360150 NCBI chr10:86,818,450...86,837,563
Ensembl chr10:86,818,478...86,837,660 		JBrowse link
G Meox2 mesenchyme homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:53,856,760...53,917,467
Ensembl chr 6:53,856,758...53,917,467 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO
IEA		 (MGI:5503248|PMID:23704330)
GO_REF:0000107		 RGD
Ensembl		 PMID:23704330 GO_REF:0000107 MGI:5503248 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1862000 (PMID:16712836)		 Ensembl
RGD		 PMID:16712836 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nup133 nucleoporin 133 acts_upstream_of_or_within ISO MGI:3578539 (PMID:18539113) RGD PMID:18539113 NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239 		JBrowse link
G Ptch1 patched 1 involved_in ISO (PMID:8681379)
(MGI:5142377|PMID:11517919)		 RGD PMID:8681379 PMID:11517919 MGI:5142377 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Rad51b RAD51 paralog B acts_upstream_of_or_within ISO MGI:3621480 (PMID:10567591) RGD PMID:10567591 NCBI chr 6:98,096,525...98,640,988
Ensembl chr 6:98,098,868...98,640,979 		JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase acts_upstream_of_or_within ISO MGI:3711066 (PMID:17470788) RGD PMID:17470788 NCBI chr 1:177,503,988...177,537,397
Ensembl chr 1:177,503,313...177,535,678 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO		 GO_REF:0000107
(MGI:5142377|PMID:11517919)		 Ensembl
RGD		 PMID:11517919 GO_REF:0000107 MGI:5142377 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5142377|PMID:11517919)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:11517919 GO_REF:0000024 GO_REF:0000107 MGI:5142377 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:98958 (PMID:25813538) RGD PMID:25813538 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:101948 (PMID:25813538) RGD PMID:25813538 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
somite rostral/caudal axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (PMID:18794329) RGD PMID:18794329 NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1857725 (PMID:11291865) RGD PMID:11291865 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within ISO MGI:3612535 (PMID:16368929) RGD PMID:16368929 NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937 		JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within ISO MGI:5448825 (PMID:22949634) RGD PMID:22949634 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062 		JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO MGI:1857502|MGI:1857848 (PMID:11291865) RGD PMID:11291865 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3580268 (PMID:20346937)		 GO_Central
RGD		 PMID:20346937 GO_REF:0000033 NCBI chr 1:133,756,601...133,759,207
Ensembl chr 1:133,756,601...133,759,198 		JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein acts_upstream_of_or_within ISO MGI:5438570 (PMID:21998026) RGD PMID:21998026 NCBI chr 3:7,992,582...7,995,136
Ensembl chr 3:7,992,552...7,995,133 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:1857502 (PMID:11291865) RGD PMID:11291865 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Ripply1 ripply transcriptional repressor 1 acts_upstream_of_or_within ISO MGI:2685968 (PMID:20346937) RGD PMID:20346937 NCBI chr  X:103,436,731...103,440,904
Ensembl chr  X:103,436,729...103,443,349 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:3613215|PMID:16326386)
MGI:3614797 (PMID:20346937)		 RGD PMID:16326386 PMID:20346937 MGI:3613215 NCBI chr 8:87,974,444...87,979,002
Ensembl chr 8:87,974,776...87,978,969 		JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858049 (PMID:9420335)		 Ensembl
RGD		 PMID:9420335 GO_REF:0000107 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within ISO (PMID:20346937) RGD PMID:20346937 NCBI chr 1:181,387,851...181,392,762
Ensembl chr 1:181,388,684...181,392,593 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4456438 (PMID:20178780)		 Ensembl
RGD		 PMID:20178780 GO_REF:0000107 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
somite specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cobl cordon-bleu WH2 repeat protein involved_in ISO
IEA		 (MGI:76306|PMID:7586755)
GO_REF:0000107		 RGD
Ensembl		 PMID:7586755 GO_REF:0000107 MGI:76306 NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3038950 (PMID:14960495)		 Ensembl
RGD		 PMID:14960495 GO_REF:0000107 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Meox1 mesenchyme homeobox 1 acts_upstream_of_or_within ISO MGI:103219 (PMID:12925591) RGD PMID:12925591 NCBI chr10:86,818,450...86,837,563
Ensembl chr10:86,818,478...86,837,660 		JBrowse link
G Meox2 mesenchyme homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:103220 (PMID:12925591)		 Ensembl
RGD		 PMID:12925591 GO_REF:0000107 NCBI chr 6:53,856,760...53,917,467
Ensembl chr 6:53,856,758...53,917,467 		JBrowse link
somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi1 abl-interactor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3578145 (PMID:15755804)		 Ensembl
RGD		 PMID:15755804 GO_REF:0000107 NCBI chr17:85,098,837...85,179,829
Ensembl chr17:85,098,550...85,179,792 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:104779 (PMID:16687486) RGD PMID:16687486 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Axin2 axin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:12636920)		 Ensembl
RGD		 PMID:12636920 GO_REF:0000107 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158343 (PMID:16943278) RGD PMID:16943278 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5296388|PMID:22072575)		 CAFA
RGD		 PMID:22072575 GO_REF:0000024 MGI:5296388 NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1096325 (PMID:15902259)
(MGI:5545944|PMID:23072809)		 UniProt
RGD		 PMID:15902259 PMID:23072809 GO_REF:0000024 MGI:5545944 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Dll3 delta like canonical Notch ligand 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857008 (PMID:15170697), (PMID:9272948)		 Ensembl
RGD		 PMID:9272948 PMID:15170697 GO_REF:0000107 NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750 		JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO MGI:1343101 (PMID:15937931) RGD PMID:15937931 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (PMID:18794329) RGD PMID:18794329 NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360 		JBrowse link
G Foxb1 forkhead box B1 involved_in ISO (MGI:3771770|PMID:18064677) RGD PMID:18064677 MGI:3771770 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781 		JBrowse link
G Foxc1 forkhead box C1 involved_in ISO UniProtKB:Q61850 (MGI:2150572|PMID:11562355) RGD PMID:11562355 MGI:2150572 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Foxc2 forkhead box C2 involved_in ISO UniProtKB:Q61572 (MGI:2150572|PMID:11562355) RGD PMID:11562355 MGI:2150572 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1929432 (PMID:11124112) RGD PMID:11124112 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Hes7 hes family bHLH transcription factor 7 acts_upstream_of_or_within ISO MGI:2652222|MGI:3046536 (PMID:11641270), (PMID:15170214), (PMID:19779553) RGD PMID:11641270 PMID:15170214 PMID:19779553 NCBI chr10:53,824,124...53,828,934
Ensembl chr10:53,825,574...53,828,097 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 acts_upstream_of_or_within ISO (PMID:15857914) RGD PMID:15857914 NCBI chr 1:196,067,163...196,069,169
Ensembl chr 1:196,067,963...196,069,169 		JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:1276116|MGI:3711317 (PMID:15937931), (PMID:17325035) RGD PMID:15937931 PMID:17325035 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1933764|MGI:98504 (PMID:10090727), (PMID:15545629)		 Ensembl
RGD		 PMID:10090727 PMID:15545629 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
MGI:3775061 (PMID:18234727)
GO_REF:0000107
(MGI:5545944|PMID:23072809)		 UniProt
RGD
Ensembl		 PMID:18234727 PMID:23072809 GO_REF:0000024 GO_REF:0000107 MGI:5545944 NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (PMID:19795512) RGD PMID:19795512 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839486 (PMID:20589884) RGD PMID:20589884 NCBI chr  X:66,404,807...66,427,775
Ensembl chr  X:66,404,760...66,428,387 		JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:104659|MGI:3580268 (PMID:15902259) RGD PMID:15902259 NCBI chr 1:133,756,601...133,759,207
Ensembl chr 1:133,756,601...133,759,198 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3603514 (PMID:16000382) RGD PMID:16000382 NCBI chr18:1,802,519...1,926,988
Ensembl chr18:1,802,519...1,920,689 		JBrowse link
G Msgn1 mesogenin 1 acts_upstream_of_or_within ISO MGI:1933263 (PMID:11124811), (PMID:21750544) RGD PMID:11124811 PMID:21750544 NCBI chr 6:33,912,787...33,913,427
Ensembl chr 6:33,912,787...33,913,427 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857219|MGI:1857973|MGI:2449231 (PMID:10929709), (PMID:19531352), (PMID:8565825) RGD PMID:8565825 PMID:10929709 PMID:19531352 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177 		JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within ISO MGI:1857220 (PMID:7588068) RGD PMID:7588068 NCBI chr 7:42,813,008...42,814,852
Ensembl chr 7:42,812,792...42,814,852 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (PMID:16831833) RGD PMID:16831833 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217 		JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (MGI:1267297|PMID:9621431) RGD PMID:9621431 MGI:1267297 NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441 		JBrowse link
G Nle1 notchless homolog 1 acts_upstream_of_or_within ISO MGI:2176174|MGI:5553357 (PMID:24875805) RGD PMID:24875805 NCBI chr10:67,834,059...67,844,771
Ensembl chr10:67,834,062...67,842,658 		JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO MGI:3801303 (PMID:20484223) RGD PMID:20484223 NCBI chr 1:176,665,076...176,689,053
Ensembl chr 1:176,665,076...176,688,990 		JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO MGI:3603176 (PMID:16093716) RGD PMID:16093716 NCBI chr 3:134,792,330...134,801,637
Ensembl chr 3:134,789,182...134,801,636 		JBrowse link
G Pcdh8 protocadherin 8 acts_upstream_of_or_within ISO (PMID:12591245) RGD PMID:12591245 NCBI chr15:55,198,470...55,203,039
Ensembl chr15:55,198,459...55,205,872 		JBrowse link
G Plxna2 plexin A2 involved_in ISO (MGI:4355631|PMID:19666519) RGD PMID:19666519 MGI:4355631 NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979 		JBrowse link
G Pofut1 protein O-fucosyltransferase 1 acts_upstream_of_or_within ISO MGI:2662305 (PMID:12697902) RGD PMID:12697902 NCBI chr 3:141,708,618...141,735,558
Ensembl chr 3:141,708,644...141,734,786 		JBrowse link
G Poglut1 protein O-glucosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2137554 (PMID:9636176)		 Ensembl
RGD		 PMID:9636176 GO_REF:0000107 NCBI chr11:62,198,600...62,226,446
Ensembl chr11:62,198,513...62,226,434 		JBrowse link
G Ppp2r3a protein phosphatase 2, regulatory subunit B'', alpha involved_in ISO UniProtKB:A0A803JG39 (PMID:15687260) RGD PMID:15687260 NCBI chr 8:101,703,512...101,841,530
Ensembl chr 8:101,704,778...101,841,502 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:107202 (PMID:16687486) RGD PMID:16687486 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284|MGI:1930934 (PMID:10557208), (PMID:19779553), (PMID:9153393) RGD PMID:9153393 PMID:10557208 PMID:19779553 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (PMID:10557208), (PMID:19779553) RGD PMID:10557208 PMID:19779553 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:1857411 (PMID:19779553) RGD PMID:19779553 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:3613215|PMID:16326386)
MGI:3513254 (PMID:17531978)		 RGD PMID:16326386 PMID:17531978 MGI:3613215 NCBI chr 8:87,974,444...87,979,002
Ensembl chr 8:87,974,776...87,978,969 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2183225 (PMID:14745966) RGD PMID:14745966 NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152 		JBrowse link
G Sema3c semaphorin 3C involved_in ISO (MGI:4355631|PMID:19666519) RGD PMID:19666519 MGI:4355631 NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:1349347|PMID:10654605)
MGI:108078 (PMID:16467359)		 RGD PMID:10654605 PMID:16467359 MGI:1349347 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:892014 (PMID:16467359) RGD PMID:16467359 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (PMID:15183723) RGD PMID:15183723 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in ISO MGI:3606185 (PMID:28893950) RGD PMID:28893950 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376 		JBrowse link
G Tbx18 T-box transcription factor 18 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3044914 (PMID:15155583)		 GO_Central
RGD		 PMID:15155583 GO_REF:0000033 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
G Tbxt T-box transcription factor T involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1856158|MGI:1857760|MGI:3042264 (PMID:15384171), (PMID:16835439), (PMID:8293872)		 GO_Central
RGD		 PMID:8293872 PMID:15384171 PMID:16835439 GO_REF:0000033 NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
G Tcap titin-cap involved_in ISO (MGI:1314551|PMID:9817758) RGD PMID:9817758 MGI:1314551 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887 		JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (PMID:8955271) RGD PMID:8955271 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO MGI:4456438 (PMID:20178780) RGD PMID:20178780 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1343101 (PMID:17320900)		 Ensembl
RGD		 PMID:17320900 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Ttn titin involved_in ISO (MGI:1314551|PMID:9817758) RGD PMID:9817758 MGI:1314551 NCBI chr 3:61,652,432...61,924,912
Ensembl chr 3:61,652,439...61,924,741 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857088|MGI:1857489 (PMID:12636920), (PMID:16291790), (PMID:8299937) RGD PMID:8299937 PMID:12636920 PMID:16291790 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1298218 (PMID:19795512)		 Ensembl
RGD		 PMID:19795512 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO MGI:1927345 (PMID:17116431) RGD PMID:17116431 NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387501 (PMID:16157277), (PMID:16598713) RGD PMID:16157277 PMID:16598713 NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157 		JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3697513|PMID:16790474)		 UniProt
RGD		 PMID:16790474 GO_REF:0000024 MGI:3697513 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (MGI:3576186|PMID:15821257) RGD PMID:15821257 MGI:3576186 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Irx1 iroquois homeobox 1 involved_in ISO (MGI:3758158|PMID:17875669) RGD PMID:17875669 MGI:3758158 NCBI chr 1:31,294,615...31,300,444
Ensembl chr 1:31,294,615...31,300,444 		JBrowse link
G Irx2 iroquois homeobox 2 involved_in ISO (MGI:3758158|PMID:17875669) RGD PMID:17875669 MGI:3758158 NCBI chr 1:30,660,960...30,666,378
Ensembl chr 1:30,660,960...30,666,378 		JBrowse link
G Irx3 iroquois homeobox 3 involved_in ISO (MGI:3758158|PMID:17875669) RGD PMID:17875669 MGI:3758158 NCBI chr19:15,211,882...15,215,317
Ensembl chr19:15,211,878...15,215,317 		JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3697513|PMID:16790474)		 UniProt
RGD		 PMID:16790474 GO_REF:0000024 MGI:3697513 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
spongiotrophoblast cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2 insulin-like growth factor 2 involved_in ISO (MGI:5424276|PMID:22562201) RGD PMID:22562201 MGI:5424276 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018 		JBrowse link
spongiotrophoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:2153832 (PMID:9331331) RGD PMID:9331331 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within ISO MGI:3769388 (PMID:17961533) RGD PMID:17961533 NCBI chr 5:139,680,670...139,683,588
Ensembl chr 5:139,680,671...139,683,583 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2137552 (PMID:24855001) RGD PMID:24855001 NCBI chr 6:69,181,429...69,268,045
Ensembl chr 6:69,181,436...69,268,053 		JBrowse link
G Lif LIF, interleukin 6 family cytokine acts_upstream_of_or_within ISO MGI:1201791 (PMID:16258063) RGD PMID:16258063 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482 		JBrowse link
G Xist X inactive specific transcript acts_upstream_of_or_within ISO MGI:2445460 (PMID:22573614) RGD PMID:22573614 NCBI chr  X:68,474,987...68,492,500 JBrowse link
spongiotrophoblast layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin acts_upstream_of_or_within ISO MGI:2176598 (PMID:16981008) RGD PMID:16981008 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:12917334) RGD PMID:12917334 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Birc6 baculoviral IAP repeat-containing 6 acts_upstream_of_or_within ISO MGI:3512417 (PMID:15485903) RGD PMID:15485903 NCBI chr 6:20,722,922...20,916,396
Ensembl chr 6:20,722,922...20,916,434 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 acts_upstream_of_or_within ISO MGI:3028946 (PMID:14673158) RGD PMID:14673158 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162 		JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3665136 (PMID:16880526)		 Ensembl
RGD		 PMID:16880526 GO_REF:0000107 NCBI chr12:38,426,466...38,517,076
Ensembl chr12:38,426,444...38,516,424 		JBrowse link
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO MGI:3832730 (PMID:19090619) RGD PMID:19090619 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238 		JBrowse link
G Zfat zinc finger and AT hook domain containing acts_upstream_of_or_within ISO MGI:4829941 (PMID:20660741) RGD PMID:20660741 NCBI chr 7:99,886,954...100,054,288
Ensembl chr 7:99,886,954...100,054,274 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO MGI:3050540 (PMID:15226444) RGD PMID:15226444 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748 		JBrowse link
spongiotrophoblast layer developmental growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plac1 placenta enriched 1 acts_upstream_of_or_within ISO MGI:3808477 (PMID:22729990) RGD PMID:22729990 NCBI chr  X:132,821,347...132,955,143
Ensembl chr  X:132,821,347...132,985,668 		JBrowse link
syncytiotrophoblast cell differentiation involved in labyrinthine layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO MGI:2151092 (PMID:21972064) RGD PMID:21972064 NCBI chr 4:5,452,683...5,556,679
Ensembl chr 4:5,452,683...5,556,659 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3583769 (PMID:23610556)		 Ensembl
RGD		 PMID:23610556 GO_REF:0000107 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
thorax and anterior abdomen determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:62488|PMID:8395349)		 UniProt
RGD		 PMID:8395349 GO_REF:0000024 MGI:62488 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
trophectodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857117 (PMID:9272950)		 Ensembl
RGD		 PMID:9272950 GO_REF:0000107 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Bysl bystin-like involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:17242206)		 Ensembl
RGD		 PMID:17242206 GO_REF:0000107 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:3696711 (PMID:17138661) RGD PMID:17138661 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Cdx2 caudal type homeo box 2 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:16325584)
MGI:1857928 (PMID:15788452), (PMID:16325584), (PMID:20404091), (PMID:25397698)		 RGD PMID:15788452 PMID:16325584 PMID:20404091 PMID:25397698 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (PMID:16579983) RGD PMID:16579983 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO (MGI:5487505|PMID:22367759) RGD PMID:22367759 MGI:5487505 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574 		JBrowse link
G Cnot2 CCR4-NOT transcription complex, subunit 2 involved_in ISO (MGI:5487505|PMID:22367759) RGD PMID:22367759 MGI:5487505 NCBI chr 7:52,130,445...52,222,338
Ensembl chr 7:52,130,441...52,223,575 		JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 involved_in ISO (MGI:5487505|PMID:22367759) RGD PMID:22367759 MGI:5487505 NCBI chr 1:65,555,924...65,572,167
Ensembl chr 1:65,555,924...65,572,167 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO (PMID:24036311) RGD PMID:24036311 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303 		JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO MGI:101893 (PMID:16325584) RGD PMID:16325584 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Foxd3 forkhead box D3 acts_upstream_of_or_within ISO MGI:2388719 (PMID:16039639) RGD PMID:16039639 NCBI chr 5:114,335,084...114,337,450
Ensembl chr 5:114,335,408...114,336,817 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in ISO (PMID:11802795) RGD PMID:11802795 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Hopx HOP homeobox acts_upstream_of_or_within ISO (PMID:17576768)
MGI:2389233 (PMID:17576768)		 RGD PMID:17576768 NCBI chr14:31,055,912...31,082,909
Ensembl chr14:31,075,148...31,082,909 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2153821 (PMID:10022836), (PMID:11456449) RGD PMID:10022836 PMID:11456449 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11456449) RGD PMID:11456449 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO MGI:1201683 (PMID:16325584) RGD PMID:16325584 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (PMID:25397698) RGD PMID:25397698 NCBI chr 2:168,198,324...168,242,011
Ensembl chr 2:168,198,463...168,242,011 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of ISO (PMID:17507372) RGD PMID:17507372 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:17576768) RGD PMID:17576768 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO MGI:3040993 (PMID:20404091) RGD PMID:20404091 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:3056522|MGI:4819826 (PMID:26902285)		 Ensembl
RGD		 PMID:26902285 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
trophectodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:10742100) RGD PMID:10742100 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO MGI:106907 (PMID:18083014) RGD PMID:18083014 NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323 		JBrowse link
trophectodermal cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15150278)
GO_REF:0000107		 RGD
Ensembl		 PMID:15150278 GO_REF:0000107 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327 		JBrowse link
G Cops2 COP9 signalosome subunit 2 acts_upstream_of_or_within ISO MGI:2678281 (PMID:12972599) RGD PMID:12972599 NCBI chr 3:113,084,174...113,110,090
Ensembl chr 3:113,084,176...113,109,947 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO (PMID:20708584) RGD PMID:20708584 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Esrrb estrogen-related receptor beta acts_upstream_of_or_within ISO MGI:1857422 (PMID:9285590) RGD PMID:9285590 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Grn granulin precursor acts_upstream_of ISO (PMID:15901638) RGD PMID:15901638 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775 		JBrowse link
G Zpr1 ZPR1 zinc finger involved_in ISO (MGI:3575865|PMID:15767679) RGD PMID:15767679 MGI:3575865 NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719 		JBrowse link
trophectodermal cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2651546 (PMID:10500095)		 Ensembl
RGD		 PMID:10500095 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Esrrb estrogen-related receptor beta acts_upstream_of_or_within ISO MGI:1857422 (PMID:9285590) RGD PMID:9285590 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:1856970|MGI:2158730 (PMID:11456449) RGD PMID:11456449 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
trophoblast giant cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cts7 cathepsin 7 acts_upstream_of_or_within ISO (PMID:18776147) RGD PMID:18776147 NCBI chr17:3,388,299...3,424,664
Ensembl chr17:3,388,299...3,393,439 		JBrowse link
G E2f7 E2F transcription factor 7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5449497|PMID:23064266)		 UniProt
Ensembl
RGD		 PMID:23064266 GO_REF:0000024 GO_REF:0000107 MGI:5449497 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734 		JBrowse link
G E2f8 E2F transcription factor 8 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5449497|PMID:23064266)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23064266 GO_REF:0000024 GO_REF:0000107 MGI:5449497 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098 		JBrowse link
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of ISO (PMID:24859262) RGD PMID:24859262 NCBI chr 3:89,808,837...89,836,977
Ensembl chr 3:89,797,880...89,836,973 		JBrowse link
G Erf Ets2 repressor factor acts_upstream_of_or_within ISO MGI:3719472 (PMID:17502352) RGD PMID:17502352 NCBI chr 1:80,829,935...80,838,388
Ensembl chr 1:80,829,935...80,838,388 		JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within ISO (PMID:24866916) RGD PMID:24866916 NCBI chr 5:139,680,670...139,683,588
Ensembl chr 5:139,680,671...139,683,583 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:23911935)
(MGI:3625684|PMID:16759287), (MGI:4359361|PMID:17891141), (MGI:7484271|PMID:10611232)		 UniProt
RGD		 PMID:10611232 PMID:16759287 PMID:17891141 PMID:23911935 GO_REF:0000024 MGI:3625684 MGI:4359361 MGI:7484271 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2137552 (PMID:24855001) RGD PMID:24855001 NCBI chr 6:69,181,429...69,268,045
Ensembl chr 6:69,181,436...69,268,053 		JBrowse link
G Lif LIF, interleukin 6 family cytokine acts_upstream_of_or_within ISO MGI:1201791 (PMID:16258063) RGD PMID:16258063 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482 		JBrowse link
G Mdfi MyoD family inhibitor acts_upstream_of_or_within ISO MGI:2155446 (PMID:9799236) RGD PMID:9799236 NCBI chr 9:13,156,806...13,175,218
Ensembl chr 9:13,156,866...13,175,217 		JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO MGI:2385933 (PMID:17404209) RGD PMID:17404209 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031 		JBrowse link
G Palld palladin, cytoskeletal associated protein IEP RGD PMID:16481593 RGD:2325785 NCBI chr16:28,228,006...28,621,349
Ensembl chr16:27,981,354...28,621,337 		JBrowse link
G Plg plasminogen involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857291 (PMID:12900459)		 Ensembl
RGD		 PMID:12900459 GO_REF:0000107 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786 		JBrowse link
G Plk4 polo-like kinase 4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:4359361|PMID:17891141)		 UniProt
Ensembl
RGD		 PMID:17891141 GO_REF:0000024 GO_REF:0000107 MGI:4359361 NCBI chr 2:123,802,527...123,820,942
Ensembl chr 2:123,802,512...123,820,942 		JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO MGI:5439582 (PMID:22987638) RGD PMID:22987638 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488 		JBrowse link
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO MGI:3832730 (PMID:19090619) RGD PMID:19090619 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238 		JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO (PMID:9676199) RGD PMID:9676199 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
G Sox15 SRY-box transcription factor 15 involved_in ISO (MGI:3625684|PMID:16759287) RGD PMID:16759287 MGI:3625684 NCBI chr10:54,373,045...54,374,749
Ensembl chr10:54,372,403...54,376,591 		JBrowse link
trunk neural crest cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama5 laminin subunit alpha 5 acts_upstream_of_or_within ISO MGI:1934917 (PMID:16316641) RGD PMID:16316641 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451 		JBrowse link
G Nrp2 neuropilin 2 acts_upstream_of_or_within ISO MGI:2137037 (PMID:16319111) RGD PMID:16319111 NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958 		JBrowse link
G Sema3f semaphorin 3F acts_upstream_of_or_within ISO MGI:2670663 (PMID:16319111) RGD PMID:16319111 NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:15337776)		 Ensembl
RGD		 PMID:15337776 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO (MGI:3611949|PMID:16319112) RGD PMID:16319112 MGI:3611949 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IEA
ISO		 GO_REF:0000107
(MGI:81287|PMID:8657307)		 Ensembl
RGD		 PMID:8657307 GO_REF:0000107 MGI:81287 NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (MGI:3714585|PMID:17522159) RGD PMID:17522159 MGI:3714585 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:1934916 (PMID:9637690) RGD PMID:9637690 NCBI chr 2:233,508,018...233,641,769
Ensembl chr 2:233,508,021...233,641,769 		JBrowse link
G Nog noggin involved_in IEA
ISO		 GO_REF:0000107
(MGI:3714585|PMID:17522159)		 Ensembl
RGD		 PMID:17522159 GO_REF:0000107 MGI:3714585 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
ventral trunk neural crest cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 involved_in ISO (MGI:3848580|PMID:19386662) RGD PMID:19386662 MGI:3848580 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633 		JBrowse link
G Nrp2 neuropilin 2 involved_in ISO
IEA		 (MGI:3848580|PMID:19386662)
GO_REF:0000107		 RGD
Ensembl		 PMID:19386662 GO_REF:0000107 MGI:3848580 NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958 		JBrowse link
G Sema3a semaphorin 3A involved_in ISO (MGI:3848580|PMID:19386662) RGD PMID:19386662 MGI:3848580 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432 		JBrowse link
G Sema3f semaphorin 3F involved_in ISO (MGI:3848580|PMID:19386662) RGD PMID:19386662 MGI:3848580 NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083 		JBrowse link
vestibular receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprq protein tyrosine phosphatase, receptor type, Q involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2679316 (PMID:22357859)		 Ensembl
RGD		 PMID:22357859 GO_REF:0000107 NCBI chr 7:42,834,455...43,016,807
Ensembl chr 7:42,837,109...43,016,917 		JBrowse link
vestibular receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pls1 plastin 1 involved_in ISO (MGI:5608770|PMID:25124451) RGD PMID:25124451 MGI:5608770 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195 		JBrowse link
Wnt signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO MGI:108078|MGI:892014 (PMID:18257070) RGD PMID:18257070 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2673982 (PMID:15469977)		 GO_Central
RGD		 PMID:15469977 GO_REF:0000033 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:108078|MGI:1329040 (PMID:18257070)		 Ensembl
RGD		 PMID:18257070 GO_REF:0000107 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:1329040|MGI:892014 (PMID:18257070) RGD PMID:18257070 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
zona limitans intrathalamica formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IDA RGD PMID:25281935 RGD:12832757 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
zygotic determination of anterior/posterior axis, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (PMID:16831833) RGD PMID:16831833 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217 		JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181754|MGI:97359 (PMID:10809672)		 Ensembl
RGD		 PMID:10809672 GO_REF:0000107 NCBI chr 1:119,428,978...119,627,626
Ensembl chr 1:119,429,265...119,627,596 		JBrowse link
zygotic specification of dorsal/ventral axis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad2 SMAD family member 2 involved_in ISO (PMID:9436979) RGD PMID:9436979 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad6 SMAD family member 6 involved_in ISO (PMID:9436979) RGD PMID:9436979 NCBI chr 8:64,450,114...64,519,673
Ensembl chr 8:64,450,114...64,519,763 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    multicellular organismal process 8887
      multicellular organism development 5276
        embryo development 1363
          embryo development ending in birth or egg hatching + 888
          embryo development ending in seed dormancy + 0
          embryonic cleavage 11
          embryonic morphogenesis + 706
          embryonic organ development + 555
          embryonic pattern specification + 81
          mitotic cell cycle, embryonic + 5
          negative regulation of embryonic development + 2
          positive regulation of embryonic development + 23
          pseudocleavage + 0
          regulation of embryonic development + 91
          somite development + 95
          syncytial embryo cellularization 0
Path 2
Term Annotations click to browse term
  biological_process 20292
    developmental process 7042
      anatomical structure development 6550
        multicellular organism development 5276
          embryo development 1363
            embryo development ending in birth or egg hatching + 888
            embryo development ending in seed dormancy + 0
            embryonic cleavage 11
            embryonic morphogenesis + 706
            embryonic organ development + 555
            embryonic pattern specification + 81
            mitotic cell cycle, embryonic + 5
            negative regulation of embryonic development + 2
            positive regulation of embryonic development + 23
            pseudocleavage + 0
            regulation of embryonic development + 91
            somite development + 95
            syncytial embryo cellularization 0
paths to the root