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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to interferon-beta
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Accession:GO:0035458 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-beta stimulus. Interferon-beta is a type I interferon.
Synonyms:exact_synonym: cellular response to fiblaferon;   cellular response to fibroblast interferon
 related_synonym: cellular response to beta-1 interferon


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cellular response to interferon-beta term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) RGD PMID:19014335 MGI:5489057 NCBI chr15:79,871,819...79,881,101
Ensembl chr15:79,871,827...79,880,529 		JBrowse link
G Aim2 absent in melanoma 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:19158679)		 GO_Central
RGD		 PMID:19158679 GO_REF:0000033 NCBI chr13:85,865,206...85,906,996
Ensembl chr13:85,866,284...85,906,975 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO
IEA		 (PMID:35568036)
GO_REF:0000107		 RGD
Ensembl		 PMID:35568036 GO_REF:0000107 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:35568036) RGD PMID:35568036 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
Ensembl chr15:7,091,567...7,104,287 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:35568036) RGD PMID:35568036 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207 		JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha involved_in ISO
ISS
IEA		 (PMID:35568036)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:35568036 GO_REF:0000024 GO_REF:0000107 NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994 		JBrowse link
G Capn2 calpain 2 IEP RGD PMID:23390485 RGD:13792657 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969 		JBrowse link
G Cdc34 cell division cycle 34, ubiqiutin conjugating enzyme involved_in ISO (PMID:24882218) RGD PMID:24882218 NCBI chr 7:10,017,588...10,023,586
Ensembl chr 7:10,017,588...10,023,186 		JBrowse link
G Ddx41 DEAD-box helicase 41 acts_upstream_of_or_within ISO (PMID:21892174) RGD PMID:21892174 NCBI chr17:9,102,926...9,108,415
Ensembl chr17:9,103,010...9,108,415 		JBrowse link
G ENSRNOG00000069878 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr13:85,977,035...85,994,718 JBrowse link
G Gbp1 guanylate binding protein 1 acts_upstream_of_or_within ISO (PMID:19158679) RGD PMID:19158679 NCBI chr 2:231,398,136...231,432,773
Ensembl chr 2:231,398,163...231,432,131
Ensembl chr 2:231,398,163...231,432,131 		JBrowse link
G Gbp2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:4412460|PMID:18025219)
(PMID:19158679)		 Ensembl
RGD		 PMID:18025219 PMID:19158679 GO_REF:0000107 MGI:4412460 NCBI chr 2:231,332,488...231,348,573
Ensembl chr 2:231,332,284...231,348,571 		JBrowse link
G Gbp4 guanylate binding protein 4 involved_in
acts_upstream_of_or_within		 ISO (MGI:4412460|PMID:18025219)
(PMID:19158679)		 RGD PMID:18025219 PMID:19158679 MGI:4412460 NCBI chr 2:231,304,910...231,318,883
Ensembl chr 2:231,305,244...231,318,879 		JBrowse link
G Gbp7 guanylate binding protein 7 involved_in ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460 NCBI chr 2:231,275,521...231,297,289
Ensembl chr 2:231,275,640...231,297,278 		JBrowse link
G Hcn1 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1 IEP RGD PMID:23042740 RGD:9686391 NCBI chr 2:49,495,771...49,899,983
Ensembl chr 2:49,495,771...49,899,774 		JBrowse link
G Htra2 HtrA serine peptidase 2 involved_in ISO (PMID:17297443) RGD PMID:17297443 NCBI chr 4:115,556,914...115,560,202
Ensembl chr 4:115,556,916...115,560,095 		JBrowse link
G Ifgga2l1 interferon-gamma-inducible GTPase 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:53,761,118...53,770,183
Ensembl chr18:53,748,631...53,772,834 		JBrowse link
G Ifgga2l2 interferon-gamma-inducible GTPase 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:53,870,838...53,890,135
Ensembl chr18:53,870,795...53,892,024 		JBrowse link
G Ifgga4l interferon-gamma-inducible GTPase 4 like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:53,838,426...53,854,858
Ensembl chr18:53,851,449...53,852,696 		JBrowse link
G Ifi214 interferon activated gene 214 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:85,940,028...85,951,004
Ensembl chr13:85,940,078...85,951,004 		JBrowse link
G Ifi47 interferon gamma inducible protein 47 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:33,297,618...33,305,248
Ensembl chr10:33,285,450...33,306,216 		JBrowse link
G Ifit1 interferon-induced protein with tetratricopeptide repeats 1 acts_upstream_of_or_within ISO (PMID:19158679) RGD PMID:19158679 NCBI chr 1:232,152,038...232,154,103
Ensembl chr 1:232,127,170...232,154,435 		JBrowse link
G Ifit3 interferon-induced protein with tetratricopeptide repeats 3 acts_upstream_of_or_within ISO (PMID:19158679) RGD PMID:19158679 NCBI chr 1:232,114,166...232,119,311
Ensembl chr 1:232,114,166...232,119,307 		JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 involved_in ISO (PMID:33563656) RGD PMID:33563656 NCBI chr 1:196,051,539...196,052,719
Ensembl chr 1:196,051,537...196,052,741 		JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 involved_in ISO (PMID:7813427) RGD PMID:7813427 NCBI chr11:30,725,774...30,752,227
Ensembl chr11:30,725,790...30,749,979 		JBrowse link
G Ifnar2 interferon alpha and beta receptor subunit 2 involved_in ISO (PMID:7759950) RGD PMID:7759950 NCBI chr11:30,613,576...30,645,958
Ensembl chr11:30,613,767...30,668,124 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:18035482), (PMID:7813427), (PMID:8027027), (PMID:8969169) RGD PMID:7813427 PMID:8027027 PMID:8969169 PMID:18035482 NCBI chr 5:103,020,758...103,021,595
Ensembl chr 5:103,020,969...103,021,523 		JBrowse link
G Igtp interferon gamma induced GTPase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:42,374,590...42,382,410
Ensembl chr10:42,357,400...42,408,247 		JBrowse link
G Irf1 interferon regulatory factor 1 involved_in ISO
IEP
IEA		 (PMID:18035482)
GO_REF:0000107		 RGD
Ensembl		 PMID:18035482 PMID:21261980 GO_REF:0000107, RGD:5128727 NCBI chr10:37,917,155...37,924,166
Ensembl chr10:37,916,670...37,924,166 		JBrowse link
G Irgm immunity-related GTPase M involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578 		JBrowse link
G LOC102556096 pyrin domain-containing protein 3-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:85,911,915...85,929,491
Ensembl chr13:85,912,044...85,929,007 		JBrowse link
G Mnda myeloid cell nuclear differentiation antigen involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:19158679)		 GO_Central
RGD		 PMID:19158679 GO_REF:0000033 NCBI chr13:86,017,888...86,035,556
Ensembl chr13:86,017,892...86,034,201 		JBrowse link
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 involved_in ISO (PMID:17297443) RGD PMID:17297443 NCBI chr16:19,526,633...19,533,567
Ensembl chr16:19,526,565...19,535,726 		JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A involved_in ISO (PMID:25205466)
(PMID:2434505)		 RGD PMID:2434505 PMID:25205466 NCBI chr12:35,669,798...35,680,505
Ensembl chr12:35,669,801...35,680,517 		JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:16410805) RGD PMID:16410805 NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696 		JBrowse link
G RGD1309362 similar to interferon-inducible GTPase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RGD1559575 similar to novel protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:33,252,146...33,276,364
Ensembl chr10:33,252,134...33,276,225 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:18035482), (PMID:28753426) RGD PMID:18035482 PMID:28753426 NCBI chr 9:49,419,561...49,459,969
Ensembl chr 9:49,419,340...49,588,540 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 acts_upstream_of_or_within ISO (PMID:21892174) RGD PMID:21892174 NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335 		JBrowse link
G Tlr3 toll-like receptor 3 IEP RGD PMID:15661832 RGD:5128798 NCBI chr16:46,821,980...46,837,900
Ensembl chr16:46,822,039...46,836,545 		JBrowse link
G Traf3ip3 TRAF3 interacting protein 3 acts_upstream_of_or_within ISO MGI:5795738 (PMID:31390091) RGD PMID:31390091 NCBI chr13:104,694,802...104,719,655
Ensembl chr13:104,694,805...104,719,673 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:19158679) RGD PMID:19158679 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:24882218) RGD PMID:24882218 NCBI chr 1:158,683,746...158,696,936
Ensembl chr 1:158,683,746...158,696,914 		JBrowse link
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 involved_in ISO (PMID:24882218) RGD PMID:24882218 NCBI chr20:10,983,734...11,005,468
Ensembl chr20:10,983,742...11,005,447 		JBrowse link
G Ube2k ubiquitin-conjugating enzyme E2K involved_in ISO (PMID:24882218) RGD PMID:24882218 NCBI chr14:42,658,016...42,718,899
Ensembl chr14:42,658,016...42,718,630 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    response to stimulus 10515
      response to chemical 5924
        response to organic substance 3640
          response to cytokine 1212
            response to interferon-beta 55
              cellular response to interferon-beta 45
paths to the root