Gene: Ifit1 (interferon-induced protein with tetratricopeptide repeats 1) Rattus norvegicus
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Symbol: Ifit1
Name: interferon-induced protein with tetratricopeptide repeats 1
Description: INVOLVED IN cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); response to bacterium (ortholog); PARTICIPATES IN hepatitis C pathway; FOUND IN cytoplasm (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 3,7-dihydropurine-6-thione
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Garg16; glucocorticoid-attenuated response gene 16 product; interferon-induced protein with tetratricopeptide repeats 1-like protein
Orthologs:
Is Marker For: Strains:   WAG.OXYS-(D1Rat219-D1Rat81)/Nov  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01252,944,105 - 252,946,170 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01260,165,590 - 260,167,655 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41238,609,171 - 238,611,236 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11238,773,058 - 238,775,125 (+)NCBI
Celera1229,265,082 - 229,267,147 (+)NCBICelera
Cytogenetic Map1q53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ifit1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620599
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-02-05
Status: ACTIVE