Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Acod1 (aconitate decarboxylase 1) Rattus norvegicus
Analyze
Symbol: Acod1
Name: aconitate decarboxylase 1
RGD ID: 1563454
Description: Predicted to have aconitate decarboxylase activity. Predicted to be involved in several processes, including cellular response to cytokine stimulus; negative regulation of response to external stimulus; and negative regulation of toll-like receptor signaling pathway. Predicted to localize to mitochondrion. Orthologous to human ACOD1 (aconitate decarboxylase 1); INTERACTS WITH 1-naphthyl isothiocyanate; 3,7-dihydropurine-6-thione; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cis-aconitate decarboxylase; immunoresponsive 1 homolog; immunoresponsive 1 homolog (mouse); immunoresponsive gene 1; Irg1; LOC306127; RGD1563454; similar to IMMUNE-RESPONSIVE PROTEIN 1
Orthologs:
Homo sapiens (human) : ACOD1 (aconitate decarboxylase 1)  HGNC  Alliance
Mus musculus (house mouse) : Acod1 (aconitate decarboxylase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Acod1 (aconitate decarboxylase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ACOD1 (aconitate decarboxylase 1)
Canis lupus familiaris (dog) : ACOD1 (aconitate decarboxylase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Acod1 (aconitate decarboxylase 1)
Sus scrofa (pig) : ACOD1 (aconitate decarboxylase 1)
Chlorocebus sabaeus (African green monkey) : ACOD1 (aconitate decarboxylase 1)
Heterocephalus glaber (naked mole-rat) : Acod1 (aconitate decarboxylase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01593,612,968 - 93,622,322 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1593,612,971 - 93,622,358 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01597,100,761 - 97,110,112 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41587,056,688 - 87,066,471 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1579,013,093 - 79,021,717 (+)NCBICelera
Cytogenetic Map15q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Acod1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563454
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.