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ONTOLOGY REPORT - ANNOTATIONS

Term:aminoglycan metabolic process
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Accession:GO:0006022 term browser browse the term
Definition:The chemical reactions and pathways involving aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.
Synonyms:exact_synonym: aminoglycan metabolism


show annotations for term's descendants           Sort by:
chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHI3L1 chitinase 3 like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:113,885,541...113,895,033
Ensembl chr 9:113,885,542...113,895,131 		JBrowse link
G CHI3L2 chitinase 3 like 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:109,081,543...109,099,172
Ensembl chr 4:109,081,450...109,099,098 		JBrowse link
G CHIA chitinase acidic involved_in ISO
IBA
IEA		 RGD
GO_Central
UniProt
Ensembl		 PMID:11085997 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:5000759 NCBI chr 4:109,035,323...109,046,499
Ensembl chr 4:109,035,326...109,046,499 		JBrowse link
G CHIT1 chitinase 1 involved_in IEA
IBA		 Ensembl
UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:113,927,715...113,941,445
Ensembl chr 9:113,927,720...113,941,433 		JBrowse link
G CTBS chitobiase involved_in ISO
IEA
IBA		 RGD
UniProt
GO_Central		 PMID:2751306 GO_REF:0000033 GO_REF:0000117 RGD:2301430 NCBI chr 6:129,173,399...129,207,868
Ensembl chr 6:129,173,444...129,207,863 		JBrowse link
G LOC100621421 acidic mammalian chitinase-like involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr 4:108,981,825...109,041,096 JBrowse link
G OVGP1 oviductal glycoprotein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:108,929,034...108,941,040
Ensembl chr 4:108,929,357...108,941,038 		JBrowse link
chondroitin sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT6 beta-1,3-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,540,066...63,541,962
Ensembl chr 6:63,540,141...63,541,112 		JBrowse link
G B3GAT1 beta-1,3-glucuronyltransferase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:60,995,280...61,020,300
Ensembl chr 9:60,995,277...61,020,103 		JBrowse link
G B3GAT2 beta-1,3-glucuronyltransferase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:50,941,967...51,041,586
Ensembl chr 1:50,938,251...51,041,583 		JBrowse link
G B3GAT3 beta-1,3-glucuronyltransferase 3 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:21763480) MGI
GO_Central
Ensembl		 PMID:21763480 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:9,119,621...9,125,081
Ensembl chr 2:9,119,656...9,125,061 		JBrowse link
G CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21138417) Ensembl
MGI		 PMID:21138417 GO_REF:0000107 NCBI chr14:61,372,289...61,415,563
Ensembl chr14:61,372,318...61,415,620 		JBrowse link
G CYTL1 cytokine like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17644814) Ensembl
MGI		 PMID:17644814 GO_REF:0000107 NCBI chr 8:5,455,576...5,460,861
Ensembl chr 8:5,455,671...5,460,861 		JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:17644814) MGI PMID:17644814 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033 		JBrowse link
G PXYLP1 2-phosphoxylose phosphatase 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:81,951,336...82,049,385
Ensembl chr13:81,970,447...82,046,028 		JBrowse link
G XYLT1 xylosyltransferase 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:27,158,438...27,492,629
Ensembl chr 3:27,158,878...27,492,762 		JBrowse link
G XYLT2 xylosyltransferase 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:26,640,802...26,656,809
Ensembl chr12:26,640,899...26,663,520 		JBrowse link
chondroitin sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUSB glucuronidase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:16,672,071...16,686,520
Ensembl chr 3:16,671,389...16,689,203 		JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793 		JBrowse link
G HYAL4 hyaluronidase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23086929) Ensembl
MGI		 PMID:23086929 GO_REF:0000107 NCBI chr18:23,623,379...23,662,528
Ensembl chr18:23,625,399...23,660,792 		JBrowse link
glycosaminoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT6 beta-1,3-galactosyltransferase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:11551958) Ensembl
MGI
GO_Central		 PMID:11551958 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:63,540,066...63,541,962
Ensembl chr 6:63,540,141...63,541,112 		JBrowse link
G B3GAT1 beta-1,3-glucuronyltransferase 1 involved_in ISO (PMID:12032138), (PMID:26659409) MGI PMID:12032138 PMID:26659409 NCBI chr 9:60,995,280...61,020,300
Ensembl chr 9:60,995,277...61,020,103 		JBrowse link
G B3GAT3 beta-1,3-glucuronyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:9,119,621...9,125,081
Ensembl chr 2:9,119,656...9,125,061 		JBrowse link
G B4GALT7 beta-1,4-galactosyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:80,349,732...80,359,878
Ensembl chr 2:80,346,307...80,359,973 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G EXT2 exostosin glycosyltransferase 2 involved_in ISO (PMID:12907669) BHF-UCL PMID:12907669 NCBI chr 2:18,099,790...18,239,229
Ensembl chr 2:18,209,102...18,232,025 		JBrowse link
G HAS1 hyaluronan synthase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:58,303,274...58,313,486
Ensembl chr 6:58,302,799...58,313,486 		JBrowse link
G HAS3 hyaluronan synthase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:17,844,974...17,870,331
Ensembl chr 6:17,843,882...17,853,210 		JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:60,878,531...60,911,537
Ensembl chr 7:60,878,284...60,913,339 		JBrowse link
G HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:7,389,774...7,424,558
Ensembl chr 8:7,389,780...7,423,869 		JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:23,255,936...23,366,570
Ensembl chr 3:23,255,961...23,366,351 		JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:57,629,279...57,730,700
Ensembl chr12:57,630,468...57,729,589 		JBrowse link
G HS3ST3B1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:58,126,477...58,168,407
Ensembl chr12:58,126,304...58,168,404 		JBrowse link
G LOC100737755 hyaluronan synthase 2-like involved_in IEA UniProt GO_REF:0000117 NCBI chr 4:17,648,345...17,674,204
Ensembl chr 4:17,655,948...17,675,586 		JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO RGD PMID:11903042 RGD:1581762 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,756...151,192,647 		JBrowse link
G PXYLP1 2-phosphoxylose phosphatase 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:81,951,336...82,049,385
Ensembl chr13:81,970,447...82,046,028 		JBrowse link
G SHAS2 hyaluronan synthase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 4:17,583,154...17,613,524
Ensembl chr 4:17,596,492...17,615,480 		JBrowse link
G UGDH UDP-glucose 6-dehydrogenase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:30,725,281...30,759,359
Ensembl chr 8:30,725,288...30,759,326 		JBrowse link
G XYLT1 xylosyltransferase 1 involved_in ISO (PMID:24161523) MGI PMID:24161523 NCBI chr 3:27,158,438...27,492,629
Ensembl chr 3:27,158,878...27,492,762 		JBrowse link
G XYLT2 xylosyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17517600) Ensembl
MGI		 PMID:17517600 GO_REF:0000107 NCBI chr12:26,640,802...26,656,809
Ensembl chr12:26,640,899...26,663,520 		JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HYAL2 hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,227...32,815,333 		JBrowse link
G IDS iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:121,572,797...121,596,525
Ensembl chr  X:121,572,807...121,596,513 		JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:16979922)
(PMID:19751987)
(PMID:19834056)
(PMID:21873421)
(PMID:16979922), (PMID:22580166)		 RGD
MGI		 PMID:6138357 PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 More... RGD:1599427 NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969 		JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11278811) Ensembl
MGI		 PMID:11278811 GO_REF:0000107 NCBI chr 2:48,937,357...48,954,206
Ensembl chr 2:48,937,419...48,954,196 		JBrowse link
G SGSH N-sulfoglucosamine sulfohydrolase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:2,241,824...2,248,388
Ensembl chr12:2,241,840...2,248,376 		JBrowse link
glycosaminoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN6 CLN6 transmembrane ER protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:166,107,895...166,126,054
Ensembl chr 1:166,107,228...166,126,808 		JBrowse link
G FOXC1 forkhead box C1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4269479) Ensembl
MGI		 PMID:4269479 GO_REF:0000107 NCBI chr 7:837,088...840,593
Ensembl chr 7:837,171...838,805 		JBrowse link
G GNS glucosamine (N-acetyl)-6-sulfatase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 5:29,128,754...29,190,283
Ensembl chr 5:29,128,760...29,190,230 		JBrowse link
G HEXA hexosaminidase subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:8896570) Ensembl
MGI
GO_Central		 PMID:8896570 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:60,878,531...60,911,537
Ensembl chr 7:60,878,284...60,913,339 		JBrowse link
G HEXB hexosaminidase subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:8896570) Ensembl
MGI
GO_Central		 PMID:8896570 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,271,351...20,279,777 JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16020517) Ensembl
MGI		 PMID:16020517 GO_REF:0000107 NCBI chr 2:151,433,925...151,525,909
Ensembl chr 2:151,489,521...151,522,749 		JBrowse link
hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC5 ATP binding cassette subfamily C member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:121,868,614...121,957,901
Ensembl chr13:121,869,600...121,926,071 		JBrowse link
G CCND3 cyclin D3 ISO RGD PMID:19276076 RGD:2316018 NCBI chr 7:37,087,336...37,182,462
Ensembl chr 7:37,082,097...37,181,366 		JBrowse link
G HAS1 hyaluronan synthase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:10617644) GO_Central
MGI		 PMID:10617644 GO_REF:0000033 NCBI chr 6:58,303,274...58,313,486
Ensembl chr 6:58,302,799...58,313,486 		JBrowse link
G HAS3 hyaluronan synthase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:9060470) Ensembl
MGI
GO_Central		 PMID:9060470 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:17,844,974...17,870,331
Ensembl chr 6:17,843,882...17,853,210 		JBrowse link
G LOC100737755 hyaluronan synthase 2-like involved_in IEA
IBA		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr 4:17,648,345...17,674,204
Ensembl chr 4:17,655,948...17,675,586 		JBrowse link
G LOC110258578 interleukin-1 beta-like involved_in ISO (PMID:15100360) UniProt PMID:15100360
G SHAS2 hyaluronan synthase 2 involved_in ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr 4:17,583,154...17,613,524
Ensembl chr 4:17,596,492...17,615,480 		JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD44 CD44 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:25,788,699...25,884,209
Ensembl chr 2:25,788,703...25,884,153 		JBrowse link
G CEMIP cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:49,622,534...49,792,547
Ensembl chr 7:49,622,539...49,792,543 		JBrowse link
G CEMIP2 cell migration inducing hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:224,960,875...225,042,378
Ensembl chr 1:224,960,875...225,042,308 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) UniProt PMID:19577615 NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916 		JBrowse link
G GUSB glucuronidase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:16,672,071...16,686,520
Ensembl chr 3:16,671,389...16,689,203 		JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:60,878,531...60,911,537
Ensembl chr 7:60,878,284...60,913,339 		JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759 		JBrowse link
G HMMR hyaluronan mediated motility receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:60,290,684...60,332,411
Ensembl chr16:60,290,001...60,331,936 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in ISS
IEA
IBA		 UniProt
Ensembl
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793 		JBrowse link
G HYAL2 hyaluronidase 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,227...32,815,333 		JBrowse link
G HYAL3 hyaluronidase 3 involved_in IEA
ISS
IBA		 InterPro
UniProt
Ensembl
GO_Central		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:32,790,843...32,796,995
Ensembl chr13:32,790,850...32,796,563 		JBrowse link
G HYAL4 hyaluronidase 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:23,623,379...23,662,528
Ensembl chr18:23,625,399...23,660,792 		JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:48,937,357...48,954,206
Ensembl chr 2:48,937,419...48,954,196 		JBrowse link
G SPAM1 sperm adhesion molecule 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:23,589,947...23,598,739
Ensembl chr18:23,589,952...23,598,739 		JBrowse link
G STAB2 stabilin 2 involved_in ISO (PMID:22371575) MGI PMID:22371575 NCBI chr 5:80,692,459...80,863,221 JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
hyaluronan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEMIP cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:49,622,534...49,792,547
Ensembl chr 7:49,622,539...49,792,543 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793 		JBrowse link
G IL15 interleukin 15 ISO RGD PMID:17667861 RGD:5013835 NCBI chr 8:85,666,963...85,740,980
Ensembl chr 8:85,667,321...85,678,461 		JBrowse link
G ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:34,892,335...34,906,378
Ensembl chr13:34,892,369...34,906,664 		JBrowse link
G ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:63,635,206...63,672,200
Ensembl chr10:63,635,210...63,672,163 		JBrowse link
G ITIH3 inter-alpha-trypsin inhibitor heavy chain 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:34,911,104...34,924,881
Ensembl chr13:34,906,538...34,933,706 		JBrowse link
G ITIH4 inter-alpha-trypsin inhibitor heavy chain 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:34,928,455...34,948,250
Ensembl chr13:34,928,439...34,948,229 		JBrowse link
G ITIH5 inter-alpha-trypsin inhibitor heavy chain 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:63,688,416...63,764,566
Ensembl chr10:63,688,427...63,767,118 		JBrowse link
G ITIH6 inter-alpha-trypsin inhibitor heavy chain family member 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:47,537,909...47,584,419 JBrowse link
G SHAS2 hyaluronan synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21246657) Ensembl
MGI		 PMID:21246657 GO_REF:0000107 NCBI chr 4:17,583,154...17,613,524
Ensembl chr 4:17,596,492...17,615,480 		JBrowse link
G TNFAIP6 TNF alpha induced protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:862,013...881,352
Ensembl chr15:862,015...881,461 		JBrowse link
negative regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP2A1 adaptor related protein complex 2 subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,786,537...54,823,906
Ensembl chr 6:54,786,511...54,823,904 		JBrowse link
G CLTC clathrin heavy chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:35,848,894...35,926,028
Ensembl chr12:35,848,540...35,926,015 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22383528) Ensembl
MGI		 PMID:22383528 GO_REF:0000107 NCBI chr 6:28,938,287...29,025,397
Ensembl chr 6:28,938,290...29,025,357 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
obsolete chondroitin sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHPF chondroitin polymerizing factor involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:22952769)
(PMID:22952873)		 Ensembl
MGI
GO_Central		 PMID:22952769 PMID:22952873 GO_REF:0000033 GO_REF:0000107 NCBI chr15:121,547,666...121,553,590
Ensembl chr15:121,544,230...121,553,288 		JBrowse link
G CHPF2 chondroitin polymerizing factor 2 involved_in IBA GO_Central GO_REF:0000033 Ensembl chr18:5,986,830...5,994,909 JBrowse link
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21138417)
(PMID:10722746)		 Ensembl
MGI		 PMID:10722746 PMID:21138417 GO_REF:0000107 NCBI chr 5:79,788,558...80,068,903
Ensembl chr 5:79,788,572...80,067,795 		JBrowse link
G CHST12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:1,721,047...1,743,080
Ensembl chr 3:1,720,906...1,743,287 		JBrowse link
G CHST13 carbohydrate sulfotransferase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:73,350,670...73,366,374
Ensembl chr13:73,350,671...73,366,085 		JBrowse link
G CHST3 carbohydrate sulfotransferase 3 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:9597547)
(PMID:11696535)		 RGD
GO_Central
MGI
Ensembl		 PMID:9597547 PMID:11696535 PMID:16495484 GO_REF:0000033 GO_REF:0000107 RGD:1600854 NCBI chr14:74,850,931...74,891,527
Ensembl chr14:74,850,931...74,891,520 		JBrowse link
G CHST7 carbohydrate sulfotransferase 7 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:41,192,993...41,234,654
Ensembl chr  X:41,193,025...41,233,330 		JBrowse link
G CHSY1 chondroitin sulfate synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:11514575)
(PMID:22952769)		 MGI
GO_Central
Ensembl		 PMID:11514575 PMID:22952769 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:139,730,703...139,804,458
Ensembl chr 1:139,730,721...139,804,657 		JBrowse link
G CHSY3 chondroitin sulfate synthase 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:132,536,085...132,803,476
Ensembl chr 2:132,535,984...132,802,188 		JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr17:12,145,141...12,498,777
Ensembl chr17:12,428,893...12,498,585 		JBrowse link
G CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:61,372,289...61,415,563
Ensembl chr14:61,372,318...61,415,620 		JBrowse link
G GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25107907) MGI
Ensembl		 PMID:25107907 GO_REF:0000107 NCBI chr15:72,276,502...72,343,524
Ensembl chr15:72,293,614...72,342,435 		JBrowse link
G LOC100517735 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:8,795,457...8,841,309 JBrowse link
G SLC35B2 solute carrier family 35 member B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:39,250,243...39,254,499
Ensembl chr 7:39,247,915...39,254,466 		JBrowse link
G SLC35D1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO (PMID:17952091) MGI PMID:17952091 NCBI chr 6:145,532,600...145,596,069
Ensembl chr 6:145,533,537...145,596,066 		JBrowse link
G UGDH UDP-glucose 6-dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:30,725,281...30,759,359
Ensembl chr 8:30,725,288...30,759,326 		JBrowse link
G XYLT1 xylosyltransferase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:27,158,438...27,492,629
Ensembl chr 3:27,158,878...27,492,762 		JBrowse link
G XYLT2 xylosyltransferase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr12:26,640,802...26,656,809
Ensembl chr12:26,640,899...26,663,520 		JBrowse link
obsolete chondroitin sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18539921)
(PMID:18695242)		 Ensembl
MGI		 PMID:18539921 PMID:18695242 GO_REF:0000107 NCBI chr 4:75,191,256...75,210,988
Ensembl chr 4:75,191,257...75,215,906 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chr 5:79,788,558...80,068,903
Ensembl chr 5:79,788,572...80,067,795 		JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20812917)
(PMID:21148564)		 MGI
Ensembl		 PMID:20812917 PMID:21148564 GO_REF:0000107 NCBI chr17:12,145,141...12,498,777
Ensembl chr17:12,428,893...12,498,585 		JBrowse link
G DSE dermatan sulfate epimerase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:81,996,894...82,063,847
Ensembl chr 1:81,934,679...82,062,982 		JBrowse link
G DSEL dermatan sulfate epimerase like involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:22496542) GO_Central
MGI		 PMID:22496542 GO_REF:0000033 NCBI chr 1:154,919,331...154,937,484
Ensembl chr 1:154,919,550...154,935,561 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32201365) Ensembl
MGI		 PMID:32201365 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
obsolete chondroitin sulfate proteoglycan biosynthetic process, chain elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHPF chondroitin polymerizing factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:121,547,666...121,553,590
Ensembl chr15:121,544,230...121,553,288 		JBrowse link
G CHSY1 chondroitin sulfate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:139,730,703...139,804,458
Ensembl chr 1:139,730,721...139,804,657 		JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in ISO (PMID:12163485) UniProt PMID:12163485 NCBI chr17:12,145,141...12,498,777
Ensembl chr17:12,428,893...12,498,585 		JBrowse link
obsolete dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:1,721,047...1,743,080
Ensembl chr 3:1,720,906...1,743,287 		JBrowse link
G CHST14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11470797) MGI
Ensembl		 PMID:11470797 GO_REF:0000107 NCBI chr 1:130,845,103...130,847,203
Ensembl chr 1:130,845,835...130,846,965 		JBrowse link
G DSE dermatan sulfate epimerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:81,996,894...82,063,847
Ensembl chr 1:81,934,679...82,062,982 		JBrowse link
G UST uronyl 2-sulfotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:16,840,422...17,138,088
Ensembl chr 1:16,840,533...17,138,392 		JBrowse link
obsolete dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSE dermatan sulfate epimerase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:81,996,894...82,063,847
Ensembl chr 1:81,934,679...82,062,982 		JBrowse link
G DSEL dermatan sulfate epimerase like involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:22496542) GO_Central
MGI		 PMID:22496542 GO_REF:0000033 NCBI chr 1:154,919,331...154,937,484
Ensembl chr 1:154,919,550...154,935,561 		JBrowse link
peptidoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100523177 lysozyme g-like protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:55,017,788...55,029,381
Ensembl chr 3:55,018,193...55,030,212 		JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:52,318,544...52,322,504
Ensembl chr 6:52,318,531...52,322,638 		JBrowse link
G PGLYRP2 peptidoglycan recognition protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:62,135,578...62,140,180
Ensembl chr 2:62,134,533...62,140,184 		JBrowse link
G PGLYRP3 peptidoglycan recognition protein 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:96,261,753...96,277,521
Ensembl chr 4:96,261,775...96,277,521 		JBrowse link
G PGLYRP4 peptidoglycan recognition protein 4 involved_in IEA InterPro GO_REF:0000002
G PGLYRP4 peptidoglycan recognition protein 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:96,243,174...96,247,517
Ensembl chr 4:96,243,118...96,261,495 		JBrowse link
poly-N-acetyllactosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:79,671,393...79,704,049
Ensembl chr 3:79,670,748...79,704,000 		JBrowse link
G B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:59,934,948...59,952,861
Ensembl chr 2:59,934,958...59,952,859 		JBrowse link
G B3GNT4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:30,520,075...30,524,275
Ensembl chr14:30,520,077...30,523,060 		JBrowse link
G B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:11,169,008...11,179,228
Ensembl chr 9:11,176,045...11,177,183 		JBrowse link
G B3GNT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:132,127,386...132,131,912
Ensembl chr15:132,127,396...132,131,916 		JBrowse link
G B3GNT8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:49,399,121...49,403,686
Ensembl chr 6:49,399,123...49,402,661 		JBrowse link
G B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:27,791,387...27,797,458
Ensembl chr 6:27,792,134...27,795,361 		JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20417617) MGI
Ensembl		 PMID:20417617 GO_REF:0000107 NCBI chr17:51,257,273...51,334,566
Ensembl chr17:51,259,813...51,334,020 		JBrowse link
G B4GAT1 beta-1,4-glucuronyltransferase 1 NOT|involved_in ISO (PMID:25279697), (PMID:25279699) UniProt PMID:25279697 PMID:25279699 NCBI chr 2:6,043,594...6,045,220
Ensembl chr 2:6,043,508...6,045,817 		JBrowse link
positive regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGF epidermal growth factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:112,235,607...112,330,062
Ensembl chr 8:112,234,386...112,330,046 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:118,391,010...118,478,927
Ensembl chr 8:118,390,638...118,506,691 		JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 5:8,986,462...9,007,435 JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:17080198 RGD:9588632 NCBI chr16:25,670,832...25,686,556
Ensembl chr16:25,670,862...25,686,552 		JBrowse link
G SHAS2 hyaluronan synthase 2 ISO RGD PMID:12186949 PMID:17080198 RGD:9588629 RGD:9588632 NCBI chr 4:17,583,154...17,613,524
Ensembl chr 4:17,596,492...17,615,480 		JBrowse link
regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22383528) Ensembl
MGI		 PMID:22383528 GO_REF:0000107 NCBI chr 6:28,938,287...29,025,397
Ensembl chr 6:28,938,290...29,025,357 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18954
    cellular process 18495
      metabolic process 11730
        carbohydrate derivative metabolic process 934
          aminoglycan metabolic process 106
            aminoglycan biosynthetic process + 61
            aminoglycan catabolic process + 32
            chitin metabolic process + 7
            glycosaminoglycan metabolic process + 90
            poly-N-acetyllactosamine metabolic process + 9
paths to the root