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ONTOLOGY REPORT - ANNOTATIONS


Term:poly-N-acetyllactosamine metabolic process
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Accession:GO:0030309 term browser browse the term
Definition:The chemical reactions and pathways involving poly-N-acetyllactosamine, a carbohydrate composed of N-acetyllactosamine repeats (Gal-beta-1,4-GlcNAc-beta-1,3)n.
Synonyms:exact_synonym: poly-N-acetyllactosamine metabolism


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poly-N-acetyllactosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:166,226,736...166,255,978
Ensembl chr 2:166,226,754...166,255,302
JBrowse link
G B3galt1 Beta-1,3-galactosyltransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:53,699,409...54,269,612
Ensembl chr 3:54,253,949...54,267,292
JBrowse link
G B3galt2 Beta-1,3-galactosyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:60,435,946...60,444,957
Ensembl chr13:60,435,946...60,444,957
JBrowse link
G B3galt5 Beta-1,3-galactosyltransferase 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:36,638,067...36,683,915
Ensembl chr11:36,634,662...36,683,672
JBrowse link
G B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 ISO
IBA
(PMID:11042166), (PMID:25279697), (PMID:9892646)
PMID:21873635
RGD PMID:9892646, PMID:11042166, PMID:25279697, PMID:21873635 RGD:13792537 NCBI chr14:107,592,336...107,617,189
Ensembl chr14:107,592,336...107,617,161
JBrowse link
G B3gnt3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 ISO
IBA
(PMID:11042166)
PMID:21873635
RGD PMID:11042166, PMID:21873635 RGD:13792537 NCBI chr16:20,123,948...20,133,482
Ensembl chr16:20,123,948...20,133,322
JBrowse link
G B3gnt4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 ISO
IBA
(PMID:11042166)
PMID:21873635
RGD PMID:11042166, PMID:21873635 RGD:13792537 NCBI chr12:38,503,361...38,506,793
Ensembl chr12:38,503,361...38,504,774
JBrowse link
G B3gnt6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:163,143,027...163,149,496
Ensembl chr 1:163,143,917...163,148,948
JBrowse link
G B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:93,326,283...93,330,234
Ensembl chr 9:93,326,283...93,330,233
JBrowse link
G B3gnt8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 ISO
IBA
(PMID:15620693)
PMID:21873635
RGD PMID:15620693, PMID:21873635 RGD:13792537 NCBI chr 1:82,419,264...82,422,852
Ensembl chr 1:82,419,947...82,422,846
JBrowse link
G B3gnt9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,208,061...37,212,400
Ensembl chr19:37,208,825...37,210,412
JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 ISO (MGI:MGI:4819078|PMID:20417617) RGD PMID:20417617 MGI:MGI:4819078 NCBI chr 3:164,039,731...164,055,561
Ensembl chr 3:164,039,731...164,095,878
JBrowse link
G B4gat1 beta-1,4-glucuronyltransferase 1 NOT ISO (PMID:25279697), (PMID:25279699) RGD PMID:25279697, PMID:25279699 NCBI chr 1:220,322,854...220,325,076
Ensembl chr 1:220,416,018...220,418,240
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      cellular metabolic process 11065
        cellular carbohydrate metabolic process 316
          cellular polysaccharide metabolic process 106
            poly-N-acetyllactosamine metabolic process 13
              poly-N-acetyllactosamine biosynthetic process 13
              poly-N-acetyllactosamine catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      organic substance metabolic process 11636
        macromolecule metabolic process 10081
          polysaccharide metabolic process 115
            cellular polysaccharide metabolic process 106
              poly-N-acetyllactosamine metabolic process 13
                poly-N-acetyllactosamine biosynthetic process 13
                poly-N-acetyllactosamine catabolic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.