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ONTOLOGY REPORT - ANNOTATIONS


Term:dermatan sulfate metabolic process
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Accession:GO:0030205 term browser browse the term
Definition:The chemical reactions and pathways involving dermatan sulfate, any of a group of glycosaminoglycans with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units. They are important components of ground substance or intercellular cement of skin and some connective tissues.
Synonyms:exact_synonym: chondroitin sulfate B metabolic process;   chondroitin sulfate B metabolism;   dermatan sulfate metabolism;   dermatan sulphate metabolic process;   dermatan sulphate metabolism


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dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSE dermatan sulfate epimerase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:81,996,894...82,063,847 JBrowse link
G DSEL dermatan sulfate epimerase like involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5583874|PMID:22496542)
GO_Central
MGI
PMID:21873635 PMID:22496542 MGI:5583874 NCBI chr 1:154,919,331...154,937,484
Ensembl chr 1:154,919,550...154,935,564
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:1,721,047...1,743,080
Ensembl chr 3:1,720,500...1,745,338
JBrowse link
G DSE dermatan sulfate epimerase involved_in ISO (PMID:16505484) UniProt PMID:16505484 NCBI chr 1:81,996,894...82,063,847 JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDUA alpha-L-iduronidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4414887|PMID:19751987)
(MGI:4397742|PMID:19834056)
MGI
Ensembl
PMID:19751987 PMID:19834056 GO_REF:0000107 MGI:4397742 MGI:4414887 NCBI chr 8:334,604...351,970
Ensembl chr 8:334,599...351,970
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16518
    cellular process 15787
      cellular metabolic process 9446
        sulfur compound metabolic process 294
          dermatan sulfate metabolic process 4
            dermatan sulfate biosynthetic process 2
            dermatan sulfate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 16518
    metabolic process 10370
      organic substance metabolic process 9943
        macromolecule metabolic process 8603
          cellular macromolecule metabolic process 7263
            glycoprotein metabolic process 352
              proteoglycan metabolic process 74
                dermatan sulfate proteoglycan metabolic process 7
                  dermatan sulfate metabolic process 4
                    dermatan sulfate biosynthetic process 2
                    dermatan sulfate catabolic process 1
paths to the root