B3GNT7 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7) - Rat Genome Database

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Gene: B3GNT7 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7) Sus scrofa
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Symbol: B3GNT7
Name: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
RGD ID: 13996460
Description: ENCODES a protein that exhibits hexosyltransferase activity (inferred); INVOLVED IN protein glycosylation (inferred); FOUND IN integral component of membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15132,127,396 - 132,131,917 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115132,127,386 - 132,131,912 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215145,843,455 - 145,846,480 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
B3GNT7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15132,127,396 - 132,131,917 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115132,127,386 - 132,131,912 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215145,843,455 - 145,846,480 (+)NCBISscrofa10.2Sscrofa10.2susScr3
B3GNT7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2231,395,710 - 231,401,164 (+)EnsemblGRCh38hg38GRCh38
GRCh382231,395,710 - 231,401,164 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372232,260,421 - 232,265,875 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362231,968,579 - 231,971,928 (+)NCBINCBI36hg18NCBI36
Build 342232,085,839 - 232,089,189NCBI
Celera2226,036,697 - 226,042,236 (+)NCBI
Cytogenetic Map2q37.1NCBI
HuRef2224,101,622 - 224,107,116 (+)NCBIHuRef
CHM1_12232,266,140 - 232,271,695 (+)NCBICHM1_1
B3gnt7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39186,230,943 - 86,235,027 (+)NCBIGRCm39mm39
GRCm39 Ensembl186,230,554 - 86,235,027 (+)Ensembl
GRCm38186,303,221 - 86,307,305 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl186,302,832 - 86,307,305 (+)EnsemblGRCm38mm10GRCm38
MGSCv37188,199,796 - 88,203,880 (+)NCBIGRCm37mm9NCBIm37
MGSCv36188,134,639 - 88,138,476 (+)NCBImm8
Celera189,271,394 - 89,275,478 (+)NCBICelera
Cytogenetic Map1C5NCBI
B3gnt7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2986,956,220 - 86,960,171 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl986,956,220 - 86,960,170 (+)Ensembl
Rnor_6.0993,326,283 - 93,330,234 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl993,326,283 - 93,330,233 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0993,055,878 - 93,059,829 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4985,069,241 - 85,073,192NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1985,252,659 - 85,256,610NCBI
Cytogenetic Map9q35NCBI
B3gnt7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554534,179,547 - 4,180,737 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554534,178,544 - 4,180,738 (-)NCBIChiLan1.0ChiLan1.0
B3GNT7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Mhudiblu_PPA_v02B118,644,899 - 118,650,463 (+)NCBIMhudiblu_PPA_v0panPan3
B3GNT7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12543,287,937 - 43,293,416 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2543,847,137 - 43,852,530 (+)NCBI
ROS_Cfam_1.02543,545,318 - 43,550,903 (+)NCBI
UMICH_Zoey_3.12543,472,896 - 43,478,886 (+)NCBI
UNSW_CanFamBas_1.02543,316,106 - 43,321,691 (+)NCBI
UU_Cfam_GSD_1.02543,471,442 - 43,477,003 (+)NCBI
B3gnt7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303185,441,557 - 185,443,920 (+)NCBI
SpeTri2.0NW_0049365255,495,815 - 5,508,400 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
B3GNT7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110117,429,516 - 117,435,910 (+)NCBI
Vero_WHO_p1.0NW_02366604082,013,921 - 82,018,409 (-)NCBI
B3gnt7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248434,603,014 - 4,606,757 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system nervous system renal system reproductive system respiratory system
High
Medium
Low 2 2 13 1 2 1
Below cutoff 6 2 3 2 10 1 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000045899   ⟹   ENSSSCP00000057113
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl15132,127,396 - 132,131,917 (+)Ensembl
RefSeq Acc Id: XM_003483754   ⟹   XP_003483802
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.115132,127,386 - 132,131,912 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003483802 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003483802   ⟸   XM_003483754
- UniProtKB: A0A287BKI9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000057113   ⟸   ENSSSCT00000045899


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000033015 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070009075 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000057113 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00070014596 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000045899 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00070017604 UniProtKB/TrEMBL
InterPro Glyco_trans_31 UniProtKB/TrEMBL
KEGG Report ssc:100737088 UniProtKB/TrEMBL
NCBI Gene B3GNT7 ENTREZGENE
PANTHER PTHR11214 UniProtKB/TrEMBL
Pfam Galactosyl_T UniProtKB/TrEMBL
UniProt A0A287BKI9 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1TI73_PIG UniProtKB/TrEMBL
VGNC ID VGNC:95895 ENTREZGENE