Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:p53 binding
go back to main search page
Accession:GO:0002039 term browser browse the term
Definition:Binding to one of the p53 family of proteins.
Synonyms:never_in_taxon: NCBITaxon:4751 ! Fungi


show annotations for term's descendants           Sort by:
p53 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD1 ankyrin repeat domain 1 enables IPI (PMID:20599664) BHF-UCL PMID:20599664 NCBI chr10:90,912,096...90,921,087
Ensembl chr10:90,912,096...90,921,087 		JBrowse link
G ARMC10 armadillo repeat containing 10 enables IPI (PMID:17904127) UniProt PMID:17904127 NCBI chr 7:103,075,140...103,099,759
Ensembl chr 7:103,074,881...103,099,759 		JBrowse link
G AXIN1 axin 1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:287,440...352,723
Ensembl chr16:287,440...352,723 		JBrowse link
G BANP BTG3 associated nuclear protein enables ISO (PMID:15701641) MGI PMID:15701641 NCBI chr16:87,949,238...88,077,318
Ensembl chr16:87,949,244...88,077,318 		JBrowse link
G BCL2L12 BCL2 like 12 enables ISO (PMID:20837658) MGI PMID:20837658 NCBI chr19:49,665,142...49,673,916
Ensembl chr19:49,665,142...49,673,916 		JBrowse link
G BLM BLM RecQ like helicase enables IPI (PMID:11781842) UniProt PMID:11781842 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166 		JBrowse link
G BRCA1 BRCA1 DNA repair associated enables IDA (PMID:15571721) DisProt PMID:15571721 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G BRD4 bromodomain containing 4 enables IDA (PMID:23317504) UniProt PMID:23317504 NCBI chr19:15,235,519...15,332,539
Ensembl chr19:15,235,519...15,332,545 		JBrowse link
G BRD7 bromodomain containing 7 enables IPI (PMID:20228809) UniProt PMID:20228809 NCBI chr16:50,315,957...50,368,988
Ensembl chr16:50,313,487...50,368,988 		JBrowse link
G CDK5 cyclin dependent kinase 5 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:151,053,815...151,057,897
Ensembl chr 7:151,053,815...151,057,897 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A enables IPI (PMID:9529249) BHF-UCL PMID:9529249 NCBI chr 9:21,967,752...21,995,324
Ensembl chr 9:21,967,752...21,995,301 		JBrowse link
G CDKN2AIP CDKN2A interacting protein enables IDA (PMID:15109303) BHF-UCL PMID:15109303 NCBI chr 4:183,444,636...183,449,064
Ensembl chr 4:183,444,635...183,449,064 		JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 enables ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr14:21,385,199...21,456,123
Ensembl chr14:21,385,194...21,456,126 		JBrowse link
G CREBBP CREB binding protein enables IPI (PMID:9194565) UniProt PMID:9194565 NCBI chr16:3,725,054...3,880,713
Ensembl chr16:3,725,054...3,880,713 		JBrowse link
G DAXX death domain associated protein enables IPI (PMID:16845383) UniProt PMID:16845383 NCBI chr 6:33,318,558...33,322,959
Ensembl chr 6:33,318,558...33,323,016 		JBrowse link
G DAZAP2 DAZ associated protein 2 enables IPI (PMID:33591310) UniProt PMID:33591310 NCBI chr12:51,238,826...51,246,717
Ensembl chr12:51,238,724...51,271,362 		JBrowse link
G DUSP26 dual specificity phosphatase 26 enables IPI (PMID:20562916) UniProt PMID:20562916 NCBI chr 8:33,591,330...33,600,023
Ensembl chr 8:33,591,330...33,600,023 		JBrowse link
G EEF2 eukaryotic translation elongation factor 2 ISO RGD PMID:12891704 RGD:10401261 NCBI chr19:3,976,056...3,985,463
Ensembl chr19:3,976,056...3,985,463 		JBrowse link
G EHMT1 euchromatic histone lysine methyltransferase 1 enables IPI
IEA		 (PMID:20118233) UniProt
InterPro		 PMID:20118233 GO_REF:0000002 NCBI chr 9:137,619,005...137,836,127
Ensembl chr 9:137,618,992...137,870,016 		JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 enables IEA
IPI		 (PMID:20118233) InterPro
UniProt		 PMID:20118233 GO_REF:0000002 NCBI chr 6:31,879,759...31,897,698
Ensembl chr 6:31,879,759...31,897,698 		JBrowse link
G EP300 E1A binding protein p300 enables ISO
IEA		 RGD
Ensembl		 PMID:21792911 GO_REF:0000107 RGD:7349387 NCBI chr22:41,092,592...41,180,077
Ensembl chr22:41,092,510...41,180,077 		JBrowse link
G GATA1 GATA binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:48,786,590...48,794,311
Ensembl chr  X:48,786,540...48,794,311 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta enables IDA (PMID:14744935) MGI PMID:14744935 NCBI chr 3:119,821,321...120,094,447
Ensembl chr 3:119,821,321...120,094,994 		JBrowse link
G HDAC1 histone deacetylase 1 enables IPI (PMID:23629966) CAFA PMID:23629966 NCBI chr 1:32,292,083...32,333,626
Ensembl chr 1:32,292,083...32,333,635 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha enables IPI
IDA
EXP		 (PMID:15629713) CAFA
DisProt		 PMID:15629713 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259 		JBrowse link
G HSPD1 heat shock protein family D (Hsp60) member 1 enables IPI (PMID:18086682) UniProt PMID:18086682 NCBI chr 2:197,486,584...197,500,274
Ensembl chr 2:197,486,584...197,516,737 		JBrowse link
G HTT huntingtin enables IPI (PMID:10823891) UniProt PMID:10823891 NCBI chr 4:3,074,681...3,243,960
Ensembl chr 4:3,041,363...3,243,957 		JBrowse link
G KDM1A lysine demethylase 1A enables IPI (PMID:17805299) BHF-UCL PMID:17805299 NCBI chr 1:23,019,468...23,083,689
Ensembl chr 1:23,019,443...23,083,689 		JBrowse link
G KDM8 lysine demethylase 8 enables IEA Ensembl GO_REF:0000107 NCBI chr16:27,203,526...27,221,768
Ensembl chr16:27,203,508...27,221,768 		JBrowse link
G MAPKAPK5 MAPK activated protein kinase 5 enables IDA
IEA		 (PMID:17254968) UniProt
Ensembl		 PMID:17254968 GO_REF:0000107 NCBI chr12:111,842,228...111,902,222
Ensembl chr12:111,842,013...111,902,222 		JBrowse link
G MDM2 MDM2 proto-oncogene enables ISO
IBA
IEA
IPI		 (PMID:15053879), (PMID:20173098), (PMID:9529249)
(PMID:25417702)		 RGD
GO_Central
TreeGrafter
Ensembl
BHF-UCL
CAFA		 PMID:9529249 PMID:15053879 PMID:16330492 PMID:20173098 PMID:23941874 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2316094 RGD:9588563 NCBI chr12:68,808,172...68,850,686
Ensembl chr12:68,808,177...68,845,544 		JBrowse link
G MSX1 msh homeobox 1 enables IPI (PMID:15705871) BHF-UCL PMID:15705871 NCBI chr 4:4,859,665...4,863,936
Ensembl chr 4:4,859,665...4,863,936 		JBrowse link
G MUC1 mucin 1, cell surface associated enables IPI (PMID:15710329) BHF-UCL PMID:15710329 NCBI chr 1:155,185,824...155,192,915
Ensembl chr 1:155,185,824...155,192,916 		JBrowse link
G MUL1 mitochondrial E3 ubiquitin protein ligase 1 enables IPI (PMID:21597459) UniProt PMID:21597459 NCBI chr 1:20,499,448...20,508,151
Ensembl chr 1:20,499,448...20,508,151 		JBrowse link
G NOP53 NOP53 ribosome biogenesis factor enables IPI (PMID:22522597) UniProt PMID:22522597 NCBI chr19:47,745,546...47,757,058
Ensembl chr19:47,745,546...47,757,058 		JBrowse link
G NPM1 nucleophosmin 1 ISO RGD PMID:15872011 RGD:11535017 NCBI chr 5:171,387,116...171,410,900
Ensembl chr 5:171,387,116...171,411,810 		JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 enables IPI (PMID:23027130) BHF-UCL PMID:23027130 NCBI chr15:87,859,751...88,256,739
Ensembl chr15:87,859,751...88,256,791 		JBrowse link
G NUAK1 NUAK family kinase 1 enables IPI (PMID:21317932) UniProt PMID:21317932 NCBI chr12:106,063,345...106,138,954
Ensembl chr12:106,063,345...106,138,954 		JBrowse link
G PLK3 polo like kinase 3 enables IDA (PMID:11447225) UniProt PMID:11447225 NCBI chr 1:44,800,377...44,805,990
Ensembl chr 1:44,800,377...44,805,990 		JBrowse link
G POU4F2 POU class 4 homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:146,638,893...146,642,474
Ensembl chr 4:146,638,893...146,642,474 		JBrowse link
G PPP1R13B protein phosphatase 1 regulatory subunit 13B enables IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr14:103,733,195...103,848,814
Ensembl chr14:103,733,195...103,847,575 		JBrowse link
G PRMT5 protein arginine methyltransferase 5 enables IPI (PMID:19011621) UniProt PMID:19011621 NCBI chr14:22,920,529...22,929,376
Ensembl chr14:22,920,525...22,929,408 		JBrowse link
G PSME3 proteasome activator subunit 3 enables IDA (PMID:18309296) UniProt PMID:18309296 NCBI chr17:42,833,397...42,843,760
Ensembl chr17:42,824,385...42,843,760 		JBrowse link
G PTGES3 prostaglandin E synthase 3 ISO RGD PMID:9488468 RGD:5688104 NCBI chr12:56,663,349...56,688,284
Ensembl chr12:56,663,341...56,688,408 		JBrowse link
G PTTG1IP PTTG1 interacting protein enables IPI (PMID:24506068) MGI PMID:24506068 NCBI chr21:44,849,598...44,873,690
Ensembl chr21:44,849,585...44,873,903 		JBrowse link
G RCHY1 ring finger and CHY zinc finger domain containing 1 enables IPI (PMID:19043414), (PMID:19483087) UniProt PMID:19043414 PMID:19483087 NCBI chr 4:75,479,033...75,514,715
Ensembl chr 4:75,479,033...75,514,764 		JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase enables IPI (PMID:17121812), (PMID:18382127) UniProt PMID:17121812 PMID:18382127 NCBI chr17:35,005,990...35,089,226
Ensembl chr17:35,005,990...35,089,319 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 enables IPI (PMID:20173098) UniProt PMID:20173098 NCBI chr16:74,621,399...74,666,877
Ensembl chr16:74,621,399...74,666,877 		JBrowse link
G RNF125 ring finger protein 125 enables IPI (PMID:25591766) UniProt PMID:25591766 NCBI chr18:32,018,825...32,088,144
Ensembl chr18:32,018,825...32,073,219 		JBrowse link
G RNF20 ring finger protein 20 enables IDA (PMID:16337599) UniProt PMID:16337599 NCBI chr 9:101,533,853...101,563,344
Ensembl chr 9:101,533,853...101,563,344 		JBrowse link
G RNF34 ring finger protein 34 enables IPI (PMID:17121812), (PMID:18382127) UniProt PMID:17121812 PMID:18382127 NCBI chr12:121,400,118...121,424,348
Ensembl chr12:121,400,083...121,430,623 		JBrowse link
G SETD7 SET domain containing 7, histone lysine methyltransferase enables IPI (PMID:17108971) UniProt PMID:17108971 NCBI chr 4:139,492,974...139,556,219
Ensembl chr 4:139,495,941...139,606,699 		JBrowse link
G SIRT1 sirtuin 1 enables IEA
IBA
IPI		 (PMID:11672523) Ensembl
TreeGrafter
GO_Central
BHF-UCL		 PMID:11672523 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 enables IPI (PMID:11950834) BHF-UCL PMID:11950834 NCBI chr19:10,961,030...11,062,273
Ensembl chr19:10,960,932...11,079,426 		JBrowse link
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 enables IPI (PMID:11950834) BHF-UCL PMID:11950834 NCBI chr22:23,786,966...23,838,009
Ensembl chr22:23,786,931...23,838,009 		JBrowse link
G SMYD2 SET and MYND domain containing 2 enables IPI (PMID:17108971) UniProt PMID:17108971 NCBI chr 1:214,281,159...214,337,131
Ensembl chr 1:214,281,102...214,337,131 		JBrowse link
G STK11 serine/threonine kinase 11 enables IDA (PMID:11430832) UniProt PMID:11430832 NCBI chr19:1,205,778...1,228,431
Ensembl chr19:1,177,558...1,228,431 		JBrowse link
G TAF1 TATA-box binding protein associated factor 1 enables IPI (PMID:15053879) BHF-UCL PMID:15053879 NCBI chr  X:71,366,357...71,530,525
Ensembl chr  X:71,366,136...71,532,374 		JBrowse link
G TAF3 TATA-box binding protein associated factor 3 enables IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:7,818,505...8,016,631
Ensembl chr10:7,818,497...8,016,631 		JBrowse link
G TAF9 TATA-box binding protein associated factor 9 enables IPI (PMID:11278372) BHF-UCL PMID:11278372 NCBI chr 5:69,364,743...69,369,824
Ensembl chr 5:69,362,026...69,370,013 		JBrowse link
G TEP1 telomerase associated protein 1 enables IPI (PMID:10597287) BHF-UCL PMID:10597287 NCBI chr14:20,365,667...20,413,501
Ensembl chr14:20,365,667...20,413,501 		JBrowse link
G TP53 tumor protein p53 enables IPI (PMID:25417702) CAFA PMID:25417702 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,546 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 enables IPI (PMID:14985081), (PMID:17805299) AgBase PMID:14985081 PMID:17805299 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728 		JBrowse link
G TP53BP2 tumor protein p53 binding protein 2 enables IPI
IEA
IBA		 (PMID:14985081) AgBase
TreeGrafter
GO_Central
InterPro		 PMID:14985081 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:223,779,893...223,845,947
Ensembl chr 1:223,779,893...223,845,954 		JBrowse link
G TP53RK TP53 regulating kinase enables IDA (PMID:11546806) HGNC-UCL PMID:11546806 NCBI chr20:46,684,365...46,689,444
Ensembl chr20:46,684,365...46,689,444 		JBrowse link
G TP63 tumor protein p63 enables IPI (PMID:25417702) CAFA PMID:25417702 NCBI chr 3:189,596,746...189,897,276
Ensembl chr 3:189,631,389...189,897,276 		JBrowse link
G TP73 tumor protein p73 enables IPI (PMID:25417702) CAFA PMID:25417702 NCBI chr 1:3,652,516...3,736,201
Ensembl chr 1:3,652,516...3,736,201 		JBrowse link
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 enables IPI (PMID:15735003) BHF-UCL PMID:15735003 NCBI chr12:120,443,964...120,446,384
Ensembl chr12:120,443,964...120,446,384 		JBrowse link
G TRIM24 tripartite motif containing 24 enables IPI
IEA		 (PMID:19556538) UniProt
Ensembl		 PMID:19556538 GO_REF:0000107 NCBI chr 7:138,460,259...138,589,996
Ensembl chr 7:138,460,259...138,589,996 		JBrowse link
G TRIM29 tripartite motif containing 29 enables IEA Ensembl GO_REF:0000107 NCBI chr11:120,111,286...120,138,113
Ensembl chr11:120,111,286...120,185,529 		JBrowse link
G USP10 ubiquitin specific peptidase 10 enables IPI (PMID:20096447) UniProt PMID:20096447 NCBI chr16:84,700,000...84,779,922
Ensembl chr16:84,699,986...84,779,922 		JBrowse link
G USP7 ubiquitin specific peptidase 7 enables IDA (PMID:20096447) UniProt PMID:20096447 NCBI chr16:8,892,097...8,963,906
Ensembl chr16:8,892,097...8,975,328 		JBrowse link
G YBX1 Y-box binding protein 1 ISO RGD PMID:16158057 RGD:1580629 NCBI chr 1:42,682,418...42,703,805
Ensembl chr 1:42,682,418...42,703,805 		JBrowse link
G ZNF385A zinc finger protein 385A enables IPI (PMID:17719541) UniProt PMID:17719541 NCBI chr12:54,369,136...54,391,298
Ensembl chr12:54,369,133...54,391,298 		JBrowse link
G ZNF385B zinc finger protein 385B enables IPI (PMID:22945289) UniProt PMID:22945289 NCBI chr 2:179,441,982...179,861,612
Ensembl chr 2:179,441,982...179,861,612 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19489
    binding 17887
      protein binding 15415
        p53 binding 75
paths to the root