BANP (BTG3 associated nuclear protein) - Rat Genome Database

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Gene: BANP (BTG3 associated nuclear protein) Homo sapiens
Analyze
Symbol: BANP
Name: BTG3 associated nuclear protein
RGD ID: 1316673
HGNC Page HGNC:13450
Description: Enables identical protein binding activity. Predicted to be involved in negative regulation of protein catabolic process and protein localization to nucleus. Located in nuclear body.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: BEN domain containing 1; BEN domain-containing protein 1; BEND1; btg3-associated nuclear protein; DKFZp761H172; FLJ10177; FLJ20538; scaffold/matrix-associated region-1-binding protein; SMAR1; SMARBP1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381687,949,238 - 88,077,318 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1687,949,244 - 88,077,318 (+)EnsemblGRCh38hg38GRCh38
GRCh371687,982,844 - 88,110,924 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361686,542,539 - 86,668,425 (+)NCBINCBI36Build 36hg18NCBI36
Celera1672,282,252 - 72,401,419 (+)NCBICelera
Cytogenetic Map16q24.2NCBI
HuRef1673,724,801 - 73,847,588 (+)NCBIHuRef
CHM1_11689,396,680 - 89,522,461 (+)NCBICHM1_1
T2T-CHM13v2.01694,021,837 - 94,148,506 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,3,5-trinitro-1,3,5-triazinane  (ISO)
17alpha-ethynylestradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2-methylcholine  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-chloropropane-1,2-diol  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acrylamide  (EXP,ISO)
aristolochic acid A  (EXP)
Aroclor 1254  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
azoxystrobin  (ISO)
Benoxacor  (ISO)
benzo[a]pyrene  (EXP)
benzo[a]pyrene diol epoxide I  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bromobenzene  (ISO)
cadmium atom  (ISO)
chlorpyrifos  (ISO)
clofibrate  (ISO)
cobalt dichloride  (EXP)
crocidolite asbestos  (ISO)
diazinon  (EXP)
dibenzo[a,l]pyrene  (ISO)
dimethylarsinic acid  (ISO)
disodium selenite  (EXP)
doxorubicin  (EXP)
epoxiconazole  (ISO)
fonofos  (EXP)
fulvestrant  (EXP)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glyphosate  (ISO)
hydrogen peroxide  (EXP)
imidacloprid  (ISO)
ketamine  (ISO)
lead(0)  (EXP)
methamphetamine  (ISO)
methylarsonic acid  (ISO)
ozone  (EXP)
paracetamol  (ISO)
parathion  (EXP)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (EXP)
Se-methyl-L-selenocysteine  (EXP)
Se-methylselenocysteine  (EXP)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
Soman  (ISO)
sulforaphane  (ISO)
sunitinib  (EXP)
terbufos  (EXP)
tetraphene  (ISO)
thiabendazole  (ISO)
thioacetamide  (ISO)
titanium dioxide  (ISO)
tungsten  (ISO)
valproic acid  (EXP)
vinclozolin  (ISO)
vorinostat  (EXP)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)
nuclear body  (IDA)
nucleoplasm  (IDA,TAS)
nucleus  (IEA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Ependymoma  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889549   PMID:10940556   PMID:10950932   PMID:12477932   PMID:12494467   PMID:14702039   PMID:15146197   PMID:15371550   PMID:15623522   PMID:16166625   PMID:16189514   PMID:16344560  
PMID:17668048   PMID:18822384   PMID:18981184   PMID:19303885   PMID:19448619   PMID:19799771   PMID:20075864   PMID:20097305   PMID:20153010   PMID:20153327   PMID:20379614   PMID:20562859  
PMID:20709157   PMID:20719862   PMID:21044950   PMID:21516116   PMID:21873635   PMID:21988832   PMID:22013068   PMID:22074660   PMID:22674979   PMID:23291589   PMID:23402259   PMID:23876508  
PMID:24722188   PMID:25086032   PMID:25157104   PMID:25239884   PMID:25299772   PMID:25416956   PMID:25609649   PMID:25910212   PMID:26080397   PMID:26186194   PMID:26841866   PMID:26871637  
PMID:27107014   PMID:28103507   PMID:28514442   PMID:28611215   PMID:28617439   PMID:29117863   PMID:29844126   PMID:30804502   PMID:31422285   PMID:31515488   PMID:32296183   PMID:32513696  
PMID:33082288   PMID:33226137   PMID:33644029   PMID:33729478   PMID:33961781   PMID:34234345   PMID:34373451   PMID:34672954   PMID:35140242   PMID:35748872   PMID:37086783   PMID:37704626  
PMID:37817309   PMID:38168028   PMID:38169650  


Genomics

Comparative Map Data
BANP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381687,949,238 - 88,077,318 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1687,949,244 - 88,077,318 (+)EnsemblGRCh38hg38GRCh38
GRCh371687,982,844 - 88,110,924 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361686,542,539 - 86,668,425 (+)NCBINCBI36Build 36hg18NCBI36
Celera1672,282,252 - 72,401,419 (+)NCBICelera
Cytogenetic Map16q24.2NCBI
HuRef1673,724,801 - 73,847,588 (+)NCBIHuRef
CHM1_11689,396,680 - 89,522,461 (+)NCBICHM1_1
T2T-CHM13v2.01694,021,837 - 94,148,506 (+)NCBIT2T-CHM13v2.0
Banp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398122,674,711 - 122,755,999 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8122,676,489 - 122,755,997 (+)EnsemblGRCm39 Ensembl
GRCm388121,947,972 - 122,029,260 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8121,949,750 - 122,029,258 (+)EnsemblGRCm38mm10GRCm38
MGSCv378124,474,433 - 124,553,158 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368124,836,670 - 124,912,027 (+)NCBIMGSCv36mm8
Celera8126,178,193 - 126,256,492 (+)NCBICelera
Cytogenetic Map8E1NCBI
cM Map870.82NCBI
Banp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81966,916,417 - 66,994,286 (+)NCBIGRCr8
mRatBN7.21950,007,710 - 50,082,742 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1950,007,881 - 50,082,738 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1956,800,151 - 56,875,047 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01957,482,809 - 57,557,430 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01959,698,744 - 59,773,640 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01954,766,441 - 54,843,795 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1954,766,589 - 54,840,569 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01965,485,716 - 65,562,982 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41952,193,660 - 52,268,521 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11952,198,537 - 52,273,415 (+)NCBI
Celera1949,252,953 - 49,326,380 (+)NCBICelera
Cytogenetic Map19q12NCBI
Banp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555412,169,303 - 2,256,779 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555412,169,303 - 2,256,779 (+)NCBIChiLan1.0ChiLan1.0
BANP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21897,715,573 - 97,841,070 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan116103,630,288 - 103,757,533 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01668,626,638 - 68,753,293 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11688,349,434 - 88,448,489 (+)NCBIpanpan1.1PanPan1.1panPan2
BANP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1565,151,863 - 65,256,782 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl565,152,247 - 65,256,667 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha565,162,111 - 65,267,012 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0565,371,550 - 65,476,482 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl565,371,548 - 65,476,442 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1565,397,260 - 65,502,077 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0565,228,933 - 65,333,795 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0565,635,910 - 65,740,823 (-)NCBIUU_Cfam_GSD_1.0
Banp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934925,633,182 - 25,719,262 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366411,387,102 - 1,472,803 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366411,386,592 - 1,472,750 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BANP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl61,421,462 - 1,495,486 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.161,421,460 - 1,495,484 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.261,560,880 - 1,595,741 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BANP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1573,341,241 - 73,466,636 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl573,341,729 - 73,466,949 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660472,238,241 - 2,366,635 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Banp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247461,203,275 - 1,286,241 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247461,205,212 - 1,287,108 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in BANP
40 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 16q23.1-24.3(chr16:78816291-90081985)x3 copy number gain See cases [RCV000050840] Chr16:78816291..90081985 [GRCh38]
Chr16:78850188..90148393 [GRCh37]
Chr16:77407689..88675894 [NCBI36]
Chr16:16q23.1-24.3		 pathogenic
GRCh38/hg38 16q22.1-24.3(chr16:70514631-90081985)x3 copy number gain See cases [RCV000052422] Chr16:70514631..90081985 [GRCh38]
Chr16:70548534..90148393 [GRCh37]
Chr16:69106035..88675894 [NCBI36]
Chr16:16q22.1-24.3		 pathogenic
GRCh38/hg38 16q21-24.3(chr16:65313395-90081985)x3 copy number gain See cases [RCV000052421] Chr16:65313395..90081985 [GRCh38]
Chr16:65347298..90148393 [GRCh37]
Chr16:63904799..88675894 [NCBI36]
Chr16:16q21-24.3		 pathogenic
GRCh38/hg38 16q23.1-24.3(chr16:76873569-90081985)x3 copy number gain See cases [RCV000052423] Chr16:76873569..90081985 [GRCh38]
Chr16:76907466..90148393 [GRCh37]
Chr16:75464967..88675894 [NCBI36]
Chr16:16q23.1-24.3		 pathogenic
GRCh38/hg38 16q23.3-24.3(chr16:82173150-90081985)x3 copy number gain See cases [RCV000052424] Chr16:82173150..90081985 [GRCh38]
Chr16:82206755..90148393 [GRCh37]
Chr16:80764256..88675894 [NCBI36]
Chr16:16q23.3-24.3		 pathogenic
GRCh38/hg38 16q24.1-24.3(chr16:84707538-90081985)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052425]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052425]|See cases [RCV000052425] Chr16:84707538..90081985 [GRCh38]
Chr16:84741144..90148393 [GRCh37]
Chr16:83298645..88675894 [NCBI36]
Chr16:16q24.1-24.3		 pathogenic
GRCh38/hg38 16q24.2-24.3(chr16:87853401-90081985)x3 copy number gain See cases [RCV000052428] Chr16:87853401..90081985 [GRCh38]
Chr16:87887007..90148393 [GRCh37]
Chr16:86444508..88675894 [NCBI36]
Chr16:16q24.2-24.3		 pathogenic
GRCh38/hg38 16q24.2-24.3(chr16:87306529-89269079)x1 copy number loss See cases [RCV000053362] Chr16:87306529..89269079 [GRCh38]
Chr16:87340135..89335487 [GRCh37]
Chr16:85897636..87862988 [NCBI36]
Chr16:16q24.2-24.3		 pathogenic
GRCh38/hg38 16q23.3-24.3(chr16:83988570-90081985)x3 copy number gain See cases [RCV000135659] Chr16:83988570..90081985 [GRCh38]
Chr16:84022175..90148393 [GRCh37]
Chr16:82579676..88675894 [NCBI36]
Chr16:16q23.3-24.3		 likely pathogenic
GRCh38/hg38 16q23.2-24.3(chr16:80946659-90081985)x3 copy number gain See cases [RCV000136898] Chr16:80946659..90081985 [GRCh38]
Chr16:80980556..90148393 [GRCh37]
Chr16:79538057..88675894 [NCBI36]
Chr16:16q23.2-24.3		 pathogenic|likely pathogenic
GRCh38/hg38 16q22.1-24.3(chr16:70749398-90096995)x3 copy number gain See cases [RCV000137495] Chr16:70749398..90096995 [GRCh38]
Chr16:70783301..90163403 [GRCh37]
Chr16:69340802..88690904 [NCBI36]
Chr16:16q22.1-24.3		 pathogenic
GRCh38/hg38 16q24.2-24.3(chr16:87848216-90096995)x3 copy number gain See cases [RCV000138161] Chr16:87848216..90096995 [GRCh38]
Chr16:87881822..90163403 [GRCh37]
Chr16:86439323..88690904 [NCBI36]
Chr16:16q24.2-24.3		 likely pathogenic
GRCh38/hg38 16q23.3-24.3(chr16:83478453-89932910)x3 copy number gain See cases [RCV000137980] Chr16:83478453..89932910 [GRCh38]
Chr16:83512058..89999318 [GRCh37]
Chr16:82069559..88526819 [NCBI36]
Chr16:16q23.3-24.3		 likely pathogenic
GRCh38/hg38 16q21-24.3(chr16:65511483-90096995)x3 copy number gain See cases [RCV000139426] Chr16:65511483..90096995 [GRCh38]
Chr16:65545386..90163403 [GRCh37]
Chr16:64102887..88690904 [NCBI36]
Chr16:16q21-24.3		 pathogenic
GRCh38/hg38 16q23.1-24.3(chr16:75377981-90081992)x3 copy number gain See cases [RCV000139302] Chr16:75377981..90081992 [GRCh38]
Chr16:75411879..90148400 [GRCh37]
Chr16:73969380..88675901 [NCBI36]
Chr16:16q23.1-24.3		 pathogenic
GRCh38/hg38 16q24.1-24.3(chr16:85552976-90096995)x3 copy number gain See cases [RCV000139658] Chr16:85552976..90096995 [GRCh38]
Chr16:85586582..90163403 [GRCh37]
Chr16:84144083..88690904 [NCBI36]
Chr16:16q24.1-24.3		 pathogenic
GRCh38/hg38 16q23.2-24.3(chr16:80717291-90096662)x3 copy number gain See cases [RCV000141128] Chr16:80717291..90096662 [GRCh38]
Chr16:80751188..90163070 [GRCh37]
Chr16:79308689..88690571 [NCBI36]
Chr16:16q23.2-24.3		 pathogenic
GRCh38/hg38 16q23.1-24.3(chr16:76336203-90088654)x3 copy number gain See cases [RCV000141700] Chr16:76336203..90088654 [GRCh38]
Chr16:76370100..90155062 [GRCh37]
Chr16:74927601..88682563 [NCBI36]
Chr16:16q23.1-24.3		 pathogenic
GRCh38/hg38 16q21-24.3(chr16:64389378-90081985)x3 copy number gain See cases [RCV000142578] Chr16:64389378..90081985 [GRCh38]
Chr16:64423281..90148393 [GRCh37]
Chr16:62980782..88675894 [NCBI36]
Chr16:16q21-24.3		 pathogenic|likely pathogenic
GRCh38/hg38 16q23.2-24.3(chr16:80067315-90057871)x3 copy number gain See cases [RCV000142698] Chr16:80067315..90057871 [GRCh38]
Chr16:80101212..90124279 [GRCh37]
Chr16:78658713..88651780 [NCBI36]
Chr16:16q23.2-24.3		 pathogenic
GRCh38/hg38 16q24.2(chr16:87766820-88391819)x3 copy number gain See cases [RCV000142588] Chr16:87766820..88391819 [GRCh38]
Chr16:87800426..88458227 [GRCh37]
Chr16:86357927..86985728 [NCBI36]
Chr16:16q24.2		 uncertain significance
GRCh38/hg38 16q12.2-24.3(chr16:52899183-90088654)x3 copy number gain See cases [RCV000143425] Chr16:52899183..90088654 [GRCh38]
Chr16:52933095..90155062 [GRCh37]
Chr16:51490596..88682563 [NCBI36]
Chr16:16q12.2-24.3		 pathogenic
GRCh38/hg38 16q24.1-24.3(chr16:86950106-89335814)x1 copy number loss See cases [RCV000143624] Chr16:86950106..89335814 [GRCh38]
Chr16:86983712..89402222 [GRCh37]
Chr16:85541213..87929723 [NCBI36]
Chr16:16q24.1-24.3		 pathogenic
GRCh37/hg19 16q23.1-24.3(chr16:74872514-90274440)x3 copy number gain See cases [RCV000240108] Chr16:74872514..90274440 [GRCh37]
Chr16:16q23.1-24.3		 pathogenic
t(5;16)(p15.31;q23.1) translocation not provided [RCV000203391] Chr5:1..8180513 [GRCh37]
Chr16:76935310..90354753 [GRCh37]
Chr5:5p15.33-15.31
Chr16:16q23.1-24.3		 likely pathogenic
Single allele deletion 16q24.3 microdeletion syndrome [RCV000258230] Chr16:87183661..89520803 [GRCh37]
Chr16:16q24.2-24.3		 pathogenic
Single allele deletion 16q24.3 microdeletion syndrome [RCV000258380] Chr16:87340135..89335428 [GRCh37]
Chr16:16q24.2-24.3		 pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46615804-90142285)x1 copy number loss Breast ductal adenocarcinoma [RCV000207138] Chr16:46615804..90142285 [GRCh37]
Chr16:16q11.2-24.3		 uncertain significance
GRCh37/hg19 16q22.2-24.3(chr16:72107834-90142285)x1 copy number loss Breast ductal adenocarcinoma [RCV000207182] Chr16:72107834..90142285 [GRCh37]
Chr16:16q22.2-24.3		 uncertain significance
Single allele complex Breast ductal adenocarcinoma [RCV000207314] Chr16:56368689..90141355 [GRCh37]
Chr16:16q12.2-24.3		 uncertain significance
GRCh37/hg19 16q24.2-24.3(chr16:87687199-89304429)x3 copy number gain See cases [RCV000240062] Chr16:87687199..89304429 [GRCh37]
Chr16:16q24.2-24.3		 uncertain significance
NM_001386991.1(BANP):c.692A>G (p.Asn231Ser) single nucleotide variant Ependymoma [RCV000577856] Chr16:88018464 [GRCh38]
Chr16:88052070 [GRCh37]
Chr16:16q24.2		 uncertain significance
GRCh37/hg19 16q11.2-24.3(chr16:46464488-90155062)x3 copy number gain See cases [RCV000446110] Chr16:46464488..90155062 [GRCh37]
Chr16:16q11.2-24.3		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:69193-90274381)x3 copy number gain See cases [RCV000446684] Chr16:69193..90274381 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16q24.2-24.3(chr16:87219866-89561087)x1 copy number loss not provided [RCV000509325] Chr16:87219866..89561087 [GRCh37]
Chr16:16q24.2-24.3		 not provided
GRCh37/hg19 16q24.2-24.3(chr16:88104077-88958038)x3 copy number gain See cases [RCV000510568] Chr16:88104077..88958038 [GRCh37]
Chr16:16q24.2-24.3		 likely benign
GRCh37/hg19 16p13.2-q24.3(chr16:9273328-89548493)x3 copy number gain See cases [RCV000511622] Chr16:9273328..89548493 [GRCh37]
Chr16:16p13.2-q24.3		 uncertain significance
GRCh37/hg19 16q24.1-24.3(chr16:84937273-89836905)x4 copy number gain See cases [RCV000511606] Chr16:84937273..89836905 [GRCh37]
Chr16:16q24.1-24.3		 likely pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46497599-90354753)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626429] Chr16:46497599..90354753 [GRCh37]
Chr16:16q11.2-24.3		 drug response
GRCh37/hg19 16q23.3-24.3(chr16:82761333-90055381) copy number gain not provided [RCV000767619] Chr16:82761333..90055381 [GRCh37]
Chr16:16q23.3-24.3		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062)x3 copy number gain See cases [RCV000512138] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
NM_001386991.1(BANP):c.61G>A (p.Asp21Asn) single nucleotide variant Inborn genetic diseases [RCV003275822] Chr16:87975176 [GRCh38]
Chr16:88008782 [GRCh37]
Chr16:16q24.2		 uncertain significance
GRCh37/hg19 16q11.2-24.3(chr16:46455960-90354753)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626435] Chr16:46455960..90354753 [GRCh37]
Chr16:16q11.2-24.3		 drug response
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062) copy number gain See cases [RCV000511296] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16q13-24.3(chr16:57051473-89797669)x3 copy number gain See cases [RCV000512511] Chr16:57051473..89797669 [GRCh37]
Chr16:16q13-24.3		 pathogenic
GRCh37/hg19 16q23.3-24.3(chr16:83001540-90155062)x3 copy number gain See cases [RCV000512468] Chr16:83001540..90155062 [GRCh37]
Chr16:16q23.3-24.3		 likely pathogenic
GRCh37/hg19 16q24.1-24.3(chr16:85838574-90155062)x3 copy number gain See cases [RCV000512440] Chr16:85838574..90155062 [GRCh37]
Chr16:16q24.1-24.3		 pathogenic
Single allele deletion not provided [RCV000677910] Chr16:86890893..89398630 [GRCh37]
Chr16:16q24.1-24.3		 pathogenic
GRCh37/hg19 16q24.2(chr16:87766191-87992527)x3 copy number gain not provided [RCV000683857] Chr16:87766191..87992527 [GRCh37]
Chr16:16q24.2		 uncertain significance
GRCh37/hg19 16q23.2-24.3(chr16:79400436-90155062)x3 copy number gain not provided [RCV000683845] Chr16:79400436..90155062 [GRCh37]
Chr16:16q23.2-24.3		 pathogenic
GRCh37/hg19 16q22.2-24.3(chr16:72515938-90155062)x3 copy number gain not provided [RCV000683831] Chr16:72515938..90155062 [GRCh37]
Chr16:16q22.2-24.3		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90274695)x3 copy number gain not provided [RCV000738918] Chr16:88165..90274695 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:61451-90294632)x3 copy number gain not provided [RCV000738915] Chr16:61451..90294632 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90163275)x3 copy number gain not provided [RCV000738917] Chr16:88165..90163275 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16q24.2(chr16:87669407-88114637)x3 copy number gain not provided [RCV000751806] Chr16:87669407..88114637 [GRCh37]
Chr16:16q24.2		 benign
GRCh37/hg19 16q24.2(chr16:87662098-88059562)x3 copy number gain not provided [RCV000847099] Chr16:87662098..88059562 [GRCh37]
Chr16:16q24.2		 uncertain significance
GRCh37/hg19 16q24.2-24.3(chr16:87848902-88809407)x3 copy number gain not provided [RCV000849210] Chr16:87848902..88809407 [GRCh37]
Chr16:16q24.2-24.3		 uncertain significance
NM_001386991.1(BANP):c.1129C>G (p.Leu377Val) single nucleotide variant Inborn genetic diseases [RCV003272722] Chr16:88033174 [GRCh38]
Chr16:88066780 [GRCh37]
Chr16:16q24.2		 uncertain significance
NC_000016.9:g.(?_87677844)_(88505740_?)dup duplication not provided [RCV003105455] Chr16:87677844..88505740 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.975G>A (p.Thr325=) single nucleotide variant not provided [RCV000933802] Chr16:88027562 [GRCh38]
Chr16:88061168 [GRCh37]
Chr16:16q24.2		 benign
NM_001386991.1(BANP):c.1564C>T (p.Leu522Phe) single nucleotide variant Inborn genetic diseases [RCV003295035] Chr16:88076632 [GRCh38]
Chr16:88110238 [GRCh37]
Chr16:16q24.2		 uncertain significance
GRCh37/hg19 16q24.2(chr16:87765473-87992527)x3 copy number gain not provided [RCV001006839] Chr16:87765473..87992527 [GRCh37]
Chr16:16q24.2		 likely benign
GRCh37/hg19 16q21-24.3(chr16:61524229-90155062)x3 copy number gain not provided [RCV001249359] Chr16:61524229..90155062 [GRCh37]
Chr16:16q21-24.3		 not provided
GRCh37/hg19 16q24.2(chr16:88020700-88608345)x1 copy number loss not provided [RCV001258661] Chr16:88020700..88608345 [GRCh37]
Chr16:16q24.2		 uncertain significance
GRCh37/hg19 16q24.2(chr16:87762484-88234413)x1 copy number loss not provided [RCV001258660] Chr16:87762484..88234413 [GRCh37]
Chr16:16q24.2		 uncertain significance
NC_000016.9:g.(?_87636753)_(88505740_?)del deletion Hyperammonemic encephalopathy due to carbonic anhydrase VA deficiency [RCV001381808] Chr16:87636753..88505740 [GRCh37]
Chr16:16q24.2		 pathogenic
NC_000016.9:g.(?_87636753)_(90109753_?)dup duplication Granulomatous disease, chronic, autosomal recessive, cytochrome b-negative [RCV003119313]|Primary ciliary dyskinesia 33 [RCV003109228] Chr16:87636753..90109753 [GRCh37]
Chr16:16q24.2-24.3		 uncertain significance
GRCh37/hg19 16q23.2-24.3(chr16:80386595-90163348)x3 copy number gain not provided [RCV001795551] Chr16:80386595..90163348 [GRCh37]
Chr16:16q23.2-24.3		 pathogenic
GRCh37/hg19 16q24.2-24.3(chr16:88000389-90155062)x3 copy number gain not provided [RCV001829158] Chr16:88000389..90155062 [GRCh37]
Chr16:16q24.2-24.3		 uncertain significance
NC_000016.9:g.(?_87636753)_(89723996_?)dup duplication Mucopolysaccharidosis, MPS-IV-A [RCV001939908] Chr16:87636753..89723996 [GRCh37]
Chr16:16q24.2-24.3		 uncertain significance
GRCh37/hg19 16q11.2-24.3(chr16:46503968-90155062)x3 copy number gain not provided [RCV002221458] Chr16:46503968..90155062 [GRCh37]
Chr16:16q11.2-24.3		 pathogenic
NM_001386991.1(BANP):c.497G>A (p.Arg166Gln) single nucleotide variant Inborn genetic diseases [RCV003277607] Chr16:88006107 [GRCh38]
Chr16:88039713 [GRCh37]
Chr16:16q24.2		 uncertain significance
GRCh37/hg19 16q22.2-24.3(chr16:71641395-90161959)x3 copy number gain Syndromic anorectal malformation [RCV002286607] Chr16:71641395..90161959 [GRCh37]
Chr16:16q22.2-24.3		 likely pathogenic
NM_001386991.1(BANP):c.1462G>A (p.Asp488Asn) single nucleotide variant Inborn genetic diseases [RCV002864288] Chr16:88072153 [GRCh38]
Chr16:88105759 [GRCh37]
Chr16:16q24.2		 uncertain significance
GRCh37/hg19 16q24.2(chr16:87782799-88150144)x1 copy number loss not provided [RCV002475527] Chr16:87782799..88150144 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.278C>T (p.Thr93Met) single nucleotide variant Inborn genetic diseases [RCV002992799] Chr16:87984175 [GRCh38]
Chr16:88017781 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.1058C>T (p.Pro353Leu) single nucleotide variant Inborn genetic diseases [RCV002727553] Chr16:88027645 [GRCh38]
Chr16:88061251 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.228A>T (p.Gln76His) single nucleotide variant Inborn genetic diseases [RCV002762071] Chr16:87984125 [GRCh38]
Chr16:88017731 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.1144G>T (p.Ala382Ser) single nucleotide variant Inborn genetic diseases [RCV002698615] Chr16:88033189 [GRCh38]
Chr16:88066795 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.1508C>T (p.Thr503Met) single nucleotide variant Inborn genetic diseases [RCV002763155] Chr16:88072199 [GRCh38]
Chr16:88105805 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.1306G>A (p.Gly436Ser) single nucleotide variant Inborn genetic diseases [RCV002762966] Chr16:88038006 [GRCh38]
Chr16:88071612 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.444C>G (p.Asn148Lys) single nucleotide variant Inborn genetic diseases [RCV002959959] Chr16:88004376 [GRCh38]
Chr16:88037982 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.293G>A (p.Ser98Asn) single nucleotide variant Inborn genetic diseases [RCV002989134] Chr16:87984190 [GRCh38]
Chr16:88017796 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.1010C>T (p.Ala337Val) single nucleotide variant Inborn genetic diseases [RCV002936162] Chr16:88027597 [GRCh38]
Chr16:88061203 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.106G>A (p.Glu36Lys) single nucleotide variant Inborn genetic diseases [RCV002960292] Chr16:87981071 [GRCh38]
Chr16:88014677 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.494G>A (p.Arg165His) single nucleotide variant Inborn genetic diseases [RCV003178905] Chr16:88006104 [GRCh38]
Chr16:88039710 [GRCh37]
Chr16:16q24.2		 uncertain significance
NM_001386991.1(BANP):c.1520A>G (p.Gln507Arg) single nucleotide variant Inborn genetic diseases [RCV003199798] Chr16:88072211 [GRCh38]
Chr16:88105817 [GRCh37]
Chr16:16q24.2		 uncertain significance
GRCh37/hg19 16q24.1-24.2(chr16:86544176-88110267)x1 copy number loss not provided [RCV003222894] Chr16:86544176..88110267 [GRCh37]
Chr16:16q24.1-24.2		 pathogenic
NM_001386991.1(BANP):c.1076G>T (p.Ser359Ile) single nucleotide variant Inborn genetic diseases [RCV003376087] Chr16:88033121 [GRCh38]
Chr16:88066727 [GRCh37]
Chr16:16q24.2		 uncertain significance
GRCh37/hg19 16q24.2-24.3(chr16:88067200-89460290)x1 copy number loss not provided [RCV003483304] Chr16:88067200..89460290 [GRCh37]
Chr16:16q24.2-24.3		 pathogenic
NM_001386991.1(BANP):c.618C>T (p.Ile206=) single nucleotide variant not provided [RCV003419484] Chr16:88006228 [GRCh38]
Chr16:88039834 [GRCh37]
Chr16:16q24.2		 likely benign
Single allele deletion KBG syndrome [RCV003388953] Chr16:87169884..89487487 [GRCh38]
Chr16:16q24.2-24.3		 pathogenic
GRCh37/hg19 16q24.2-24.3(chr16:87866576-89424113)x1 copy number loss not provided [RCV003885482] Chr16:87866576..89424113 [GRCh37]
Chr16:16q24.2-24.3		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:7167
Count of miRNA genes:1067
Interacting mature miRNAs:1325
Transcripts:ENST00000286122, ENST00000355022, ENST00000355163, ENST00000393207, ENST00000393208, ENST00000412691, ENST00000423252, ENST00000436274, ENST00000436970, ENST00000439677, ENST00000454563, ENST00000456902, ENST00000459966, ENST00000466197, ENST00000466847, ENST00000472964, ENST00000474563, ENST00000479780, ENST00000481948, ENST00000485772, ENST00000488074, ENST00000497491, ENST00000526460, ENST00000538234, ENST00000565242, ENST00000569400
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D16S2733  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371688,131,646 - 88,131,782UniSTSGRCh37
GRCh371629,148,994 - 29,149,130UniSTSGRCh37
Build 361629,056,495 - 29,056,631RGDNCBI36
Celera1672,422,794 - 72,422,930UniSTS
Celera1627,466,846 - 27,466,982RGD
Cytogenetic Map16q24.2UniSTS
HuRef1673,868,256 - 73,868,392UniSTS
HuRef1627,017,908 - 27,018,044UniSTS
SHGC-148167  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371688,273,503 - 88,273,844UniSTSGRCh37
GRCh371629,277,696 - 29,278,037UniSTSGRCh37
Build 361629,185,197 - 29,185,538RGDNCBI36
Celera1627,338,907 - 27,339,248RGD
HuRef1674,008,906 - 74,009,247UniSTS
HuRef1627,145,240 - 27,145,581UniSTS
SHGC-149765  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371629,242,013 - 29,242,205UniSTSGRCh37
Build 361629,149,514 - 29,149,706RGDNCBI36
Celera1627,374,726 - 27,374,918RGD
HuRef1627,109,374 - 27,109,566UniSTS
SHGC-154291  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371688,268,411 - 88,268,737UniSTSGRCh37
GRCh371629,273,169 - 29,273,472UniSTSGRCh37
Build 361629,180,670 - 29,180,973RGDNCBI36
Celera1627,343,472 - 27,343,775RGD
HuRef1674,003,875 - 74,004,201UniSTS
HuRef1627,140,713 - 27,141,016UniSTS
SHGC-154313  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371688,267,569 - 88,267,906UniSTSGRCh37
GRCh371629,272,357 - 29,272,694UniSTSGRCh37
Build 361629,179,858 - 29,180,195RGDNCBI36
Celera1627,344,250 - 27,344,587RGD
HuRef1674,003,033 - 74,003,370UniSTS
HuRef1627,139,901 - 27,140,238UniSTS
SHGC-33012  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371688,282,666 - 88,282,806UniSTSGRCh37
GRCh371629,286,456 - 29,286,596UniSTSGRCh37
Build 361629,193,957 - 29,194,097RGDNCBI36
Celera1627,330,349 - 27,330,489RGD
HuRef1674,017,708 - 74,017,848UniSTS
HuRef1627,153,609 - 27,153,749UniSTS
STS-T49824  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16q24UniSTS
GeneMap99-GB4 RH Map16485.25UniSTS
NCBI RH Map16681.9UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 33 93 49 11 201 10 45 20 100 6 297 63 6 1 17 19 4 2
Low 2406 2871 1676 613 1745 455 4312 2154 3613 413 1163 1549 169 1187 2769 2
Below cutoff 27 1 5 23 21 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_029918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001173539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001173540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001173541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001173542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001173543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001384944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001386991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001386992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001424170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_017869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_079837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011523172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011523177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011523182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011523183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011523184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001751945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001751946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001751947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001751948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_933350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_933352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_933353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC127455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC134312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK001039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK094158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK125232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK315089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK315535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL157429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN289917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA632793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT585143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  T49823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000286122   ⟹   ENSP00000286122
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,432 - 88,077,317 (+)Ensembl
RefSeq Acc Id: ENST00000355022   ⟹   ENSP00000347125
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,487 - 88,077,318 (+)Ensembl
RefSeq Acc Id: ENST00000393207   ⟹   ENSP00000376902
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,970,018 - 88,077,318 (+)Ensembl
RefSeq Acc Id: ENST00000393208   ⟹   ENSP00000376903
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,434 - 88,077,318 (+)Ensembl
RefSeq Acc Id: ENST00000412691   ⟹   ENSP00000390504
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,445 - 87,984,251 (+)Ensembl
RefSeq Acc Id: ENST00000423252   ⟹   ENSP00000401718
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,950,436 - 87,981,049 (+)Ensembl
RefSeq Acc Id: ENST00000436274   ⟹   ENSP00000401454
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,963,379 - 87,984,182 (+)Ensembl
RefSeq Acc Id: ENST00000436970   ⟹   ENSP00000399576
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,959,871 - 88,004,301 (+)Ensembl
RefSeq Acc Id: ENST00000439677   ⟹   ENSP00000411479
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,432 - 88,018,455 (+)Ensembl
RefSeq Acc Id: ENST00000454563   ⟹   ENSP00000413717
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,434 - 87,981,102 (+)Ensembl
RefSeq Acc Id: ENST00000456902   ⟹   ENSP00000410089
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,966,703 - 87,984,254 (+)Ensembl
RefSeq Acc Id: ENST00000459966   ⟹   ENSP00000435727
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,435 - 88,006,183 (+)Ensembl
RefSeq Acc Id: ENST00000466197   ⟹   ENSP00000431812
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,485 - 88,004,391 (+)Ensembl
RefSeq Acc Id: ENST00000466847
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1688,035,052 - 88,076,835 (+)Ensembl
RefSeq Acc Id: ENST00000472964
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,982,618 - 87,984,259 (+)Ensembl
RefSeq Acc Id: ENST00000474563
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,980,535 - 87,984,227 (+)Ensembl
RefSeq Acc Id: ENST00000479780   ⟹   ENSP00000432508
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,434 - 88,076,661 (+)Ensembl
RefSeq Acc Id: ENST00000481948
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1688,071,073 - 88,077,318 (+)Ensembl
RefSeq Acc Id: ENST00000485772   ⟹   ENSP00000436869
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,481 - 88,003,931 (+)Ensembl
RefSeq Acc Id: ENST00000488074
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,950,436 - 87,984,234 (+)Ensembl
RefSeq Acc Id: ENST00000497491
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1688,017,190 - 88,033,219 (+)Ensembl
RefSeq Acc Id: ENST00000526460
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,467 - 87,957,069 (+)Ensembl
RefSeq Acc Id: ENST00000538234   ⟹   ENSP00000444352
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,959,871 - 88,077,315 (+)Ensembl
RefSeq Acc Id: ENST00000565242
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1688,037,273 - 88,072,130 (+)Ensembl
RefSeq Acc Id: ENST00000569400
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,949,244 - 87,984,251 (+)Ensembl
RefSeq Acc Id: ENST00000612301
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,952,247 - 87,952,748 (+)Ensembl
RefSeq Acc Id: ENST00000626016   ⟹   ENSP00000487304
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,479 - 88,077,206 (+)Ensembl
RefSeq Acc Id: ENST00000682872   ⟹   ENSP00000507916
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,434 - 88,077,316 (+)Ensembl
RefSeq Acc Id: ENST00000700483   ⟹   ENSP00000515015
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1687,951,430 - 88,077,178 (+)Ensembl
RefSeq Acc Id: NM_001173539   ⟹   NP_001167010
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
GRCh371687,984,231 - 88,110,924 (+)NCBI
HuRef1673,724,801 - 73,847,588 (+)ENTREZGENE
CHM1_11689,396,680 - 89,522,461 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001173540   ⟹   NP_001167011
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
GRCh371687,984,231 - 88,110,924 (+)NCBI
HuRef1673,724,801 - 73,847,588 (+)ENTREZGENE
CHM1_11689,396,680 - 89,522,461 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001173541   ⟹   NP_001167012
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
GRCh371687,984,231 - 88,110,924 (+)NCBI
HuRef1673,724,801 - 73,847,588 (+)ENTREZGENE
CHM1_11689,396,680 - 89,522,461 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001173542   ⟹   NP_001167013
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,959,871 - 88,077,318 (+)NCBI
GRCh371687,984,231 - 88,110,924 (+)NCBI
HuRef1673,724,801 - 73,847,588 (+)ENTREZGENE
CHM1_11689,405,122 - 89,522,461 (+)NCBI
T2T-CHM13v2.01694,032,474 - 94,148,506 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001173543   ⟹   NP_001167014
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,970,018 - 88,077,318 (+)NCBI
GRCh371687,984,231 - 88,110,924 (+)NCBI
HuRef1673,724,801 - 73,847,588 (+)ENTREZGENE
CHM1_11689,415,270 - 89,522,461 (+)NCBI
T2T-CHM13v2.01694,042,608 - 94,148,506 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384916   ⟹   NP_001371845
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,949,238 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,021,837 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384918   ⟹   NP_001371847
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,949,238 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,021,837 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384919   ⟹   NP_001371848
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,950,461 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,023,060 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384920   ⟹   NP_001371849
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384921   ⟹   NP_001371850
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,949,238 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,021,837 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384922   ⟹   NP_001371851
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,950,461 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,023,060 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384923   ⟹   NP_001371852
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384925   ⟹   NP_001371854
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,949,238 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,021,837 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384926   ⟹   NP_001371855
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384927   ⟹   NP_001371856
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384928   ⟹   NP_001371857
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,950,461 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,023,060 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384929   ⟹   NP_001371858
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384931   ⟹   NP_001371860
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,949,238 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,021,837 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384935   ⟹   NP_001371864
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384936   ⟹   NP_001371865
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,949,238 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,021,837 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384937   ⟹   NP_001371866
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384938   ⟹   NP_001371867
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384939   ⟹   NP_001371868
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384940   ⟹   NP_001371869
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,977,153 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,049,715 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384941   ⟹   NP_001371870
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,949,238 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,021,837 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384942   ⟹   NP_001371871
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384943   ⟹   NP_001371872
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001384944   ⟹   NP_001371873
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001386991   ⟹   NP_001373920
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001386992   ⟹   NP_001373921
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001424170   ⟹   NP_001411099
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
RefSeq Acc Id: NM_017869   ⟹   NP_060339
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
GRCh371687,984,231 - 88,110,924 (+)NCBI
Build 361686,542,539 - 86,668,425 (+)NCBI Archive
HuRef1673,724,801 - 73,847,588 (+)ENTREZGENE
CHM1_11689,396,680 - 89,522,461 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
RefSeq Acc Id: NM_079837   ⟹   NP_524576
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 88,077,316 (+)NCBI
GRCh371687,984,231 - 88,110,924 (+)NCBI
Build 361686,542,539 - 86,668,425 (+)NCBI Archive
HuRef1673,724,801 - 73,847,588 (+)ENTREZGENE
CHM1_11689,396,680 - 89,522,461 (+)NCBI
T2T-CHM13v2.01694,024,033 - 94,148,504 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001167010 (Get FASTA)   NCBI Sequence Viewer  
  NP_001167011 (Get FASTA)   NCBI Sequence Viewer  
  NP_001167012 (Get FASTA)   NCBI Sequence Viewer  
  NP_001167013 (Get FASTA)   NCBI Sequence Viewer  
  NP_001167014 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371845 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371847 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371848 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371849 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371850 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371851 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371852 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371854 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371855 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371856 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371857 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371858 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371860 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371864 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371865 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371866 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371867 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371868 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371869 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371870 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371871 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371872 (Get FASTA)   NCBI Sequence Viewer  
  NP_001371873 (Get FASTA)   NCBI Sequence Viewer  
  NP_001373920 (Get FASTA)   NCBI Sequence Viewer  
  NP_001373921 (Get FASTA)   NCBI Sequence Viewer  
  NP_001411099 (Get FASTA)   NCBI Sequence Viewer  
  NP_060339 (Get FASTA)   NCBI Sequence Viewer  
  NP_524576 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH09424 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34122 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34123 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34124 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34125 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34126 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34127 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34128 (Get FASTA)   NCBI Sequence Viewer  
  BAC04296 (Get FASTA)   NCBI Sequence Viewer  
  BAG37554 (Get FASTA)   NCBI Sequence Viewer  
  BAG50850 (Get FASTA)   NCBI Sequence Viewer  
  BAG54171 (Get FASTA)   NCBI Sequence Viewer  
  BAG56965 (Get FASTA)   NCBI Sequence Viewer  
  BAG60261 (Get FASTA)   NCBI Sequence Viewer  
  CAB75653 (Get FASTA)   NCBI Sequence Viewer  
  EAW95364 (Get FASTA)   NCBI Sequence Viewer  
  EAW95365 (Get FASTA)   NCBI Sequence Viewer  
  EAW95366 (Get FASTA)   NCBI Sequence Viewer  
  EAW95367 (Get FASTA)   NCBI Sequence Viewer  
  EAW95368 (Get FASTA)   NCBI Sequence Viewer  
  EAW95369 (Get FASTA)   NCBI Sequence Viewer  
  EAW95370 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000286122.7
  ENSP00000347125
  ENSP00000347125.4
  ENSP00000376902
  ENSP00000376902.1
  ENSP00000376903
  ENSP00000376903.2
  ENSP00000390504.1
  ENSP00000399576.1
  ENSP00000401454.1
  ENSP00000401718.1
  ENSP00000410089.1
  ENSP00000411479.1
  ENSP00000413717.1
  ENSP00000431812.1
  ENSP00000432508
  ENSP00000432508.1
  ENSP00000435727.1
  ENSP00000436869.1
  ENSP00000444352
  ENSP00000444352.1
  ENSP00000487304
  ENSP00000487304.1
  ENSP00000507916
  ENSP00000507916.1
  ENSP00000515015
  ENSP00000515015.1
GenBank Protein Q8N9N5 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001167011   ⟸   NM_001173540
- Peptide Label: isoform d
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001167010   ⟸   NM_001173539
- Peptide Label: isoform c
- UniProtKB: B3KM38 (UniProtKB/TrEMBL),   B4DE54 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_524576   ⟸   NM_079837
- Peptide Label: isoform b
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_060339   ⟸   NM_017869
- Peptide Label: isoform a
- UniProtKB: B3KM38 (UniProtKB/TrEMBL),   A0A0S2Z5C2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001167012   ⟸   NM_001173541
- Peptide Label: isoform e
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001167013   ⟸   NM_001173542
- Peptide Label: isoform f
- UniProtKB: A0A0S2Z5M2 (UniProtKB/TrEMBL),   B3KM38 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001167014   ⟸   NM_001173543
- Peptide Label: isoform g
- UniProtKB: Q96GJ7 (UniProtKB/Swiss-Prot),   F5GZM0 (UniProtKB/Swiss-Prot),   B4DNJ9 (UniProtKB/Swiss-Prot),   B2RCF7 (UniProtKB/Swiss-Prot),   A8MX25 (UniProtKB/Swiss-Prot),   A8MU25 (UniProtKB/Swiss-Prot),   Q9NWY1 (UniProtKB/Swiss-Prot),   Q8N9N5 (UniProtKB/Swiss-Prot),   B3KM38 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000401718   ⟸   ENST00000423252
RefSeq Acc Id: ENSP00000411479   ⟸   ENST00000439677
RefSeq Acc Id: ENSP00000432508   ⟸   ENST00000479780
RefSeq Acc Id: ENSP00000390504   ⟸   ENST00000412691
RefSeq Acc Id: ENSP00000431812   ⟸   ENST00000466197
RefSeq Acc Id: ENSP00000413717   ⟸   ENST00000454563
RefSeq Acc Id: ENSP00000487304   ⟸   ENST00000626016
RefSeq Acc Id: ENSP00000410089   ⟸   ENST00000456902
RefSeq Acc Id: ENSP00000286122   ⟸   ENST00000286122
RefSeq Acc Id: ENSP00000435727   ⟸   ENST00000459966
RefSeq Acc Id: ENSP00000444352   ⟸   ENST00000538234
RefSeq Acc Id: ENSP00000436869   ⟸   ENST00000485772
RefSeq Acc Id: ENSP00000376903   ⟸   ENST00000393208
RefSeq Acc Id: ENSP00000376902   ⟸   ENST00000393207
RefSeq Acc Id: ENSP00000347125   ⟸   ENST00000355022
RefSeq Acc Id: ENSP00000401454   ⟸   ENST00000436274
RefSeq Acc Id: ENSP00000399576   ⟸   ENST00000436970
RefSeq Acc Id: NP_001371870   ⟸   NM_001384941
- Peptide Label: isoform m
RefSeq Acc Id: NP_001371860   ⟸   NM_001384931
- Peptide Label: isoform i
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371865   ⟸   NM_001384936
- Peptide Label: isoform j
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371854   ⟸   NM_001384925
- Peptide Label: isoform f
- UniProtKB: A0A0S2Z5M2 (UniProtKB/TrEMBL),   B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371847   ⟸   NM_001384918
- Peptide Label: isoform c
- UniProtKB: B4DE54 (UniProtKB/TrEMBL),   B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371845   ⟸   NM_001384916
- Peptide Label: isoform a
- UniProtKB: A0A0S2Z5C2 (UniProtKB/TrEMBL),   B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371850   ⟸   NM_001384921
- Peptide Label: isoform e
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371857   ⟸   NM_001384928
- Peptide Label: isoform h
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371848   ⟸   NM_001384919
- Peptide Label: isoform c
- UniProtKB: B4DE54 (UniProtKB/TrEMBL),   B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371851   ⟸   NM_001384922
- Peptide Label: isoform e
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371849   ⟸   NM_001384920
- Peptide Label: isoform c
- UniProtKB: B4DE54 (UniProtKB/TrEMBL),   B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371856   ⟸   NM_001384927
- Peptide Label: isoform f
- UniProtKB: A0A0S2Z5M2 (UniProtKB/TrEMBL),   B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371852   ⟸   NM_001384923
- Peptide Label: isoform e
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371868   ⟸   NM_001384939
- Peptide Label: isoform l
RefSeq Acc Id: NP_001371871   ⟸   NM_001384942
- Peptide Label: isoform m
RefSeq Acc Id: NP_001371872   ⟸   NM_001384943
- Peptide Label: isoform n
RefSeq Acc Id: NP_001371873   ⟸   NM_001384944
- Peptide Label: isoform o
RefSeq Acc Id: NP_001371858   ⟸   NM_001384929
- Peptide Label: isoform h
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371864   ⟸   NM_001384935
- Peptide Label: isoform i
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371866   ⟸   NM_001384937
- Peptide Label: isoform j
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371867   ⟸   NM_001384938
- Peptide Label: isoform k
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371855   ⟸   NM_001384926
- Peptide Label: isoform f
- UniProtKB: A0A0S2Z5M2 (UniProtKB/TrEMBL),   B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001371869   ⟸   NM_001384940
- Peptide Label: isoform l
RefSeq Acc Id: NP_001373920   ⟸   NM_001386991
- Peptide Label: isoform p
- UniProtKB: A0A804HKG3 (UniProtKB/TrEMBL),   B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001373921   ⟸   NM_001386992
- Peptide Label: isoform q
- UniProtKB: B3KM38 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSP00000507916   ⟸   ENST00000682872
RefSeq Acc Id: ENSP00000515015   ⟸   ENST00000700483
RefSeq Acc Id: NP_001411099   ⟸   NM_001424170
- Peptide Label: isoform c
- UniProtKB: B4DE54 (UniProtKB/TrEMBL)
Protein Domains
BEN

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8N9N5-F1-model_v2 AlphaFold Q8N9N5 1-519 view protein structure

Promoters
RGD ID:6792829
Promoter ID:HG_KWN:24442
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:OTTHUMT00000312875,   OTTHUMT00000312876,   OTTHUMT00000312877,   UC002FKO.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361686,541,771 - 86,542,271 (+)MPROMDB
RGD ID:6792830
Promoter ID:HG_KWN:24443
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001173539,   NM_001173540,   NM_017869,   NM_079837,   OTTHUMT00000312872,   OTTHUMT00000312873,   OTTHUMT00000312874,   OTTHUMT00000312878,   OTTHUMT00000312879,   OTTHUMT00000312884,   OTTHUMT00000312885,   UC002FKS.2
Position:
Human AssemblyChrPosition (strand)Source
Build 361686,542,041 - 86,542,757 (+)MPROMDB
RGD ID:6792834
Promoter ID:HG_KWN:24444
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:NM_001173542,   OTTHUMT00000312880,   UC010CHV.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361686,550,571 - 86,551,071 (+)MPROMDB
RGD ID:6792833
Promoter ID:HG_KWN:24445
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour
Transcripts:OTTHUMT00000312881
Position:
Human AssemblyChrPosition (strand)Source
Build 361686,554,436 - 86,554,936 (+)MPROMDB
RGD ID:7233101
Promoter ID:EPDNEW_H22296
Type:initiation region
Name:BANP_1
Description:BTG3 associated nuclear protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381687,951,434 - 87,951,494EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:13450 AgrOrtholog
COSMIC BANP COSMIC
Ensembl Genes ENSG00000172530 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000286122.11 UniProtKB/Swiss-Prot
  ENST00000355022 ENTREZGENE
  ENST00000355022.8 UniProtKB/Swiss-Prot
  ENST00000393207 ENTREZGENE
  ENST00000393207.5 UniProtKB/Swiss-Prot
  ENST00000393208 ENTREZGENE
  ENST00000393208.6 UniProtKB/Swiss-Prot
  ENST00000412691.5 UniProtKB/TrEMBL
  ENST00000423252.5 UniProtKB/TrEMBL
  ENST00000436274.5 UniProtKB/TrEMBL
  ENST00000436970.5 UniProtKB/TrEMBL
  ENST00000439677.5 UniProtKB/TrEMBL
  ENST00000454563.5 UniProtKB/TrEMBL
  ENST00000456902.5 UniProtKB/TrEMBL
  ENST00000459966.5 UniProtKB/TrEMBL
  ENST00000466197.5 UniProtKB/TrEMBL
  ENST00000479780 ENTREZGENE
  ENST00000479780.6 UniProtKB/Swiss-Prot
  ENST00000485772.5 UniProtKB/TrEMBL
  ENST00000538234 ENTREZGENE
  ENST00000538234.5 UniProtKB/Swiss-Prot
  ENST00000626016 ENTREZGENE
  ENST00000626016.2 UniProtKB/Swiss-Prot
  ENST00000682872 ENTREZGENE
  ENST00000682872.1 UniProtKB/TrEMBL
  ENST00000700483 ENTREZGENE
  ENST00000700483.1 UniProtKB/TrEMBL
Gene3D-CATH BEN domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000172530 GTEx
HGNC ID HGNC:13450 ENTREZGENE
Human Proteome Map BANP Human Proteome Map
InterPro BANP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BEN_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:54971 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 54971 ENTREZGENE
OMIM 611564 OMIM
PANTHER PROTEIN BANP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR16243 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BEN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134933411 PharmGKB
PROSITE BEN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BEN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0S2Z5C2 ENTREZGENE, UniProtKB/TrEMBL
  A0A0S2Z5G4_HUMAN UniProtKB/TrEMBL
  A0A0S2Z5M2 ENTREZGENE, UniProtKB/TrEMBL
  A0A0S2Z696_HUMAN UniProtKB/TrEMBL
  A0A804HKG3 ENTREZGENE, UniProtKB/TrEMBL
  A8MU25 ENTREZGENE
  A8MX25 ENTREZGENE
  B2RCF7 ENTREZGENE
  B3KM38 ENTREZGENE, UniProtKB/TrEMBL
  B4DE54 ENTREZGENE, UniProtKB/TrEMBL
  B4DNJ9 ENTREZGENE
  BANP_HUMAN UniProtKB/Swiss-Prot
  C9J811_HUMAN UniProtKB/TrEMBL
  C9JF73_HUMAN UniProtKB/TrEMBL
  C9JGM9_HUMAN UniProtKB/TrEMBL
  C9JLS0_HUMAN UniProtKB/TrEMBL
  C9JLT2_HUMAN UniProtKB/TrEMBL
  C9JTM8_HUMAN UniProtKB/TrEMBL
  C9JYB6_HUMAN UniProtKB/TrEMBL
  E9PIP2_HUMAN UniProtKB/TrEMBL
  E9PJI6_HUMAN UniProtKB/TrEMBL
  F5GZM0 ENTREZGENE
  Q8N9N5 ENTREZGENE
  Q96GJ7 ENTREZGENE
  Q9NSS6_HUMAN UniProtKB/TrEMBL
  Q9NWY1 ENTREZGENE
UniProt Secondary A8MU25 UniProtKB/Swiss-Prot
  A8MX25 UniProtKB/Swiss-Prot
  B2RCF7 UniProtKB/Swiss-Prot
  B4DNJ9 UniProtKB/Swiss-Prot
  F5GZM0 UniProtKB/Swiss-Prot
  Q96GJ7 UniProtKB/Swiss-Prot
  Q9NWY1 UniProtKB/Swiss-Prot