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ONTOLOGY REPORT - ANNOTATIONS

Term:gastrulation with mouth forming second
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Accession:GO:0001702 term browser browse the term
Definition:A gastrulation process in which the initial invagination becomes the anus and the mouth forms second.
Synonyms:exact_synonym: deuterostomic gastrulation
 alt_id: GO:0010003;   GO:0048276
 only_in_taxon: NCBITaxon:33511 ! Deuterostomia


show annotations for term's descendants           Sort by:
gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 acts_upstream_of_or_within IMP (PMID:17117439) MGI PMID:17117439 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Acvr2a activin receptor IIA acts_upstream_of_or_within IGI (PMID:10452853) MGI PMID:10452853 NCBI chr 2:48,704,121...48,793,276
Ensembl chr 2:48,704,121...48,793,281 		JBrowse link
G Acvr2b activin receptor IIB acts_upstream_of_or_within IGI (PMID:10452853) MGI PMID:10452853 NCBI chr 9:119,231,081...119,271,214
Ensembl chr 9:119,231,184...119,264,061 		JBrowse link
G Amot angiomotin acts_upstream_of_or_within IMP (PMID:12676095) MGI PMID:12676095 NCBI chr  X:144,229,420...144,288,145
Ensembl chr  X:144,229,421...144,288,177 		JBrowse link
G Chrd chordin acts_upstream_of_or_within IMP (PMID:12810603) MGI PMID:12810603 NCBI chr16:20,551,528...20,561,132
Ensembl chr16:20,551,877...20,561,134 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:8582267) MGI PMID:8582267 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dact1 dishevelled-binding antagonist of beta-catenin 1 acts_upstream_of_or_within IMP (PMID:19701191) MGI PMID:19701191 NCBI chr12:71,356,658...71,366,881
Ensembl chr12:71,356,658...71,366,881 		JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within IMP (PMID:15870281) MGI PMID:15870281 NCBI chr10:116,905,324...116,986,311
Ensembl chr10:116,905,332...116,984,439 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within IMP (PMID:9136933) MGI PMID:9136933 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within IMP (PMID:12490556) MGI PMID:12490556 NCBI chr19:46,019,963...46,036,584
Ensembl chr19:46,020,009...46,033,653 		JBrowse link
G Lhx1 LIM homeobox protein 1 acts_upstream_of_or_within IMP (PMID:15355796) MGI PMID:15355796 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 acts_upstream_of_or_within IGI (PMID:15142971) MGI PMID:15142971 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:15142971) MGI PMID:15142971 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Nat8 N-acetyltransferase 8 (GCN5-related) involved_in IMP (MGI:2135831|PMID:11397015) UniProt PMID:11397015 MGI:2135831 NCBI chr 6:85,807,369...85,813,839
Ensembl chr 6:85,807,370...85,809,064 		JBrowse link
G Nat8f1 N-acetyltransferase 8 (GCN5-related) family member 1 involved_in NAS (MGI:2135831|PMID:11397015) UniProt PMID:11397015 MGI:2135831 NCBI chr 6:85,887,136...85,893,210
Ensembl chr 6:85,887,136...85,892,669 		JBrowse link
G Nat8f2 N-acetyltransferase 8 (GCN5-related) family member 2 involved_in NAS (MGI:2135831|PMID:11397015) UniProt PMID:11397015 MGI:2135831 NCBI chr 6:85,842,404...85,846,119
Ensembl chr 6:85,842,404...85,846,140 		JBrowse link
G Nat8f3 N-acetyltransferase 8 (GCN5-related) family member 3 involved_in NAS (MGI:2135831|PMID:11397015) UniProt PMID:11397015 MGI:2135831 NCBI chr 6:85,737,613...85,742,726
Ensembl chr 6:85,709,495...85,742,736 		JBrowse link
G Nat8f5 N-acetyltransferase 8 (GCN5-related) family member 5 involved_in NAS (MGI:2135831|PMID:11397015) UniProt PMID:11397015 MGI:2135831 NCBI chr 6:85,794,200...85,797,954
Ensembl chr 6:85,794,200...85,797,954 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IMP (PMID:14607953) MGI PMID:14607953 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Nsd1 nuclear receptor-binding SET-domain protein 1 acts_upstream_of_or_within IMP (PMID:12805229) MGI PMID:12805229 NCBI chr13:55,357,595...55,466,138
Ensembl chr13:55,357,595...55,466,138 		JBrowse link
G Plpp3 phospholipid phosphatase 3 acts_upstream_of_or_within IMP (PMID:12925589) MGI PMID:12925589 NCBI chr 4:105,014,544...105,089,964
Ensembl chr 4:105,014,544...105,089,961 		JBrowse link
G Rnf2 ring finger protein 2 acts_upstream_of_or_within IMP (PMID:12589020) MGI PMID:12589020 NCBI chr 1:151,345,159...151,376,562
Ensembl chr 1:151,333,755...151,376,706 		JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within IMP (PMID:15215210) MGI PMID:15215210 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Tenm4 teneurin transmembrane protein 4 acts_upstream_of_or_within IMP (PMID:15489520) MGI PMID:15489520 NCBI chr 7:95,550,262...96,560,300
Ensembl chr 7:95,820,453...96,560,300 		JBrowse link
G Ugdh UDP-glucose dehydrogenase involved_in
acts_upstream_of_or_within		 IMP (MGI:2675908|PMID:14505572)
(PMID:15755804)		 UniProt
MGI		 PMID:14505572 PMID:15755804 MGI:2675908 NCBI chr 5:65,570,550...65,593,185
Ensembl chr 5:65,570,564...65,593,292 		JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 acts_upstream_of_or_within IMP (PMID:14560010) MGI PMID:14560010 NCBI chr 4:141,171,984...141,195,248
Ensembl chr 4:141,171,965...141,195,241 		JBrowse link
epiboly involved in gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Megf8 multiple EGF-like-domains 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
ingression involved in gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb2 crumbs family member 2 involved_in IMP (MGI:5823085|PMID:27870829) UniProt PMID:27870829 MGI:5823085 NCBI chr 2:37,666,238...37,689,115
Ensembl chr 2:37,666,261...37,689,115 		JBrowse link
primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ets2 E26 avian leukemia oncogene 2, 3' domain acts_upstream_of_or_within IMP (PMID:23552073) MGI PMID:23552073 NCBI chr16:95,503,274...95,522,093
Ensembl chr16:95,502,942...95,522,095 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within IMP (PMID:11291865) MGI PMID:11291865 NCBI chr 2:147,884,797...147,888,889
Ensembl chr 2:147,884,797...147,888,889 		JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within IMP (PMID:16368929) MGI PMID:16368929 NCBI chr 6:122,582,362...122,587,046
Ensembl chr 6:122,582,362...122,587,046 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within IGI
IMP		 (PMID:21445260) MGI PMID:21445260 NCBI chr19:37,423,289...37,429,179
Ensembl chr19:37,423,258...37,429,179 		JBrowse link
G Lhx1 LIM homeobox protein 1 acts_upstream_of_or_within IMP (PMID:11291865) MGI PMID:11291865 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:19795512) MGI PMID:19795512 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IGI (PMID:21445260) MGI PMID:21445260 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IMP (PMID:11291865) MGI PMID:11291865 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:19706528) MGI PMID:19706528 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:9799237) MGI PMID:9799237 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IGI (PMID:19795512) MGI PMID:19795512 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IMP (PMID:16397896) MGI PMID:16397896 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    developmental process 7376
      anatomical structure morphogenesis 3041
        embryonic morphogenesis 706
          gastrulation 219
            gastrulation with mouth forming second 37
              delamination involved in gastrulation with mouth forming second 0
              epiboly involved in gastrulation with mouth forming second + 1
              ingression involved in gastrulation with mouth forming second 1
              invagination involved in gastrulation with mouth forming second 0
              involution involved in gastrulation with mouth forming second 0
              primitive streak formation 12
Path 2
Term Annotations click to browse term
  biological_process 28573
    developmental process 7376
      anatomical structure development 6848
        multicellular organism development 5441
          embryo development 1382
            embryonic morphogenesis 706
              gastrulation 219
                gastrulation with mouth forming second 37
                  delamination involved in gastrulation with mouth forming second 0
                  epiboly involved in gastrulation with mouth forming second + 1
                  ingression involved in gastrulation with mouth forming second 1
                  invagination involved in gastrulation with mouth forming second 0
                  involution involved in gastrulation with mouth forming second 0
                  primitive streak formation 12
paths to the root