Ugdh (UDP-glucose dehydrogenase) - Rat Genome Database

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Gene: Ugdh (UDP-glucose dehydrogenase) Mus musculus
Analyze
Symbol: Ugdh
Name: UDP-glucose dehydrogenase
RGD ID: 734074
MGI Page MGI
Description: Enables UDP-glucose 6-dehydrogenase activity. Involved in UDP-glucuronate biosynthetic process; gastrulation with mouth forming second; and proteoglycan biosynthetic process. Predicted to be located in nucleoplasm. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including alimentary system; brain; heart; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 84. Orthologous to human UGDH (UDP-glucose 6-dehydrogenase).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: UDP-Glc dehydrogenase; UDP-GlcDH; UDP-glucose 6-dehydrogenase; Udpgd; Udpgdh
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39565,570,550 - 65,593,185 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl565,570,564 - 65,593,292 (-)EnsemblGRCm39 Ensembl
GRCm38565,413,207 - 65,435,842 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl565,413,221 - 65,435,949 (-)EnsemblGRCm38mm10GRCm38
MGSCv37565,804,460 - 65,827,081 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36565,692,356 - 65,714,977 (-)NCBIMGSCv36mm8
Celera562,689,905 - 62,712,959 (-)NCBICelera
Cytogenetic Map5C3.1NCBI
cM Map533.67NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
UgdhMousedevelopmental and epileptic encephalopathy 84  ISOUGDH (Homo sapiens)8554872ClinVar more ...ClinVarPMID:25741868 more ...
UgdhMousegeneralized epilepsy  ISOUGDH (Homo sapiens)8554872ClinVar Annotator: match by term: Epileptic encephalopathyClinVarPMID:25741868 more ...
UgdhMousegenetic disease  ISOUGDH (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
UgdhMouseHyperglycinemia, Lactic Acidosis, and Seizures  ISOUGDH (Homo sapiens)8554872ClinVar more ...ClinVarPMID:28492532
UgdhMouseWest syndrome  ISOUGDH (Homo sapiens)8554872ClinVar Annotator: match by term: West syndromeClinVarPMID:25741868 and PMID:32001716
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
UgdhMouseLiver Neoplasms  ISOUGDH (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:17114358
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
UgdhMousedevelopmental and epileptic encephalopathy 84  ISOUGDH (Homo sapiens)7240710 OMIM 

1 to 20 of 213 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
UgdhMouse(+)-schisandrin B multiple interactionsISOUgdh (Rattus norvegicus)6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of UGDH mRNA]CTDPMID:31150632
UgdhMouse(-)-epigallocatechin 3-gallate increases expressionISOUGDH (Homo sapiens)6480464epigallocatechin gallate results in increased expression of UGDH mRNACTDPMID:16084531
UgdhMouse(1->4)-beta-D-glucan multiple interactionsEXP 6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of UGDH mRNACTDPMID:36331819
UgdhMouse1,2-dimethylhydrazine decreases expressionEXP 64804641 and 2-Dimethylhydrazine results in decreased expression of UGDH mRNACTDPMID:22206623
UgdhMouse1,2-dimethylhydrazine multiple interactionsEXP 6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of UGDH mRNACTDPMID:22206623
UgdhMouse1-benzofuran affects expressionEXP 6480464benzofuran affects the expression of UGDH mRNACTDPMID:17114358
UgdhMouse17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of UGDH mRNACTDPMID:17942748
UgdhMouse17beta-estradiol multiple interactionsISOUGDH (Homo sapiens)6480464[Estradiol co-treated with Tetrachlorodibenzodioxin] results in decreased expression of UGDH mRNA and [Estradiol co-treated with TGFB1 protein] results in increased expression of UGDH mRNACTDPMID:19619570 and PMID:30165855
UgdhMouse17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of UGDH mRNACTDPMID:39298647
UgdhMouse17beta-estradiol decreases expressionISOUgdh (Rattus norvegicus)6480464Estradiol results in decreased expression of UGDH mRNACTDPMID:32145629
UgdhMouse17beta-estradiol increases expressionISOUGDH (Homo sapiens)6480464Estradiol results in increased expression of UGDH mRNACTDPMID:19619570 and PMID:21185374
UgdhMouse17beta-hydroxy-5alpha-androstan-3-one increases expressionISOUGDH (Homo sapiens)6480464Dihydrotestosterone results in increased expression of UGDH mRNACTDPMID:29581250
UgdhMouse2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsEXP 6480464[2 more ...CTDPMID:23457121
UgdhMouse2,2',4,4',5,5'-hexachlorobiphenyl increases expressionEXP 64804642 more ...CTDPMID:20005886 and PMID:21851831
UgdhMouse2,2',4,4'-Tetrabromodiphenyl ether multiple interactionsEXP 6480464[Flame Retardants results in increased abundance of 2 more ...CTDPMID:38995820
UgdhMouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOUGDH (Homo sapiens)6480464Tetrachlorodibenzodioxin results in decreased expression of UGDH mRNACTDPMID:19619570
UgdhMouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOUgdh (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of UGDH mRNACTDPMID:33387578
UgdhMouse2,3,7,8-tetrachlorodibenzodioxine affects expressionISOUgdh (Rattus norvegicus)6480464Tetrachlorodibenzodioxin affects the expression of UGDH mRNACTDPMID:34747641
UgdhMouse2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of UGDH mRNACTDPMID:15328365 more ...
UgdhMouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of UGDH mRNACTDPMID:18343893 more ...

1 to 20 of 213 rows

Biological Process
1 to 13 of 13 rows

  
1 to 13 of 13 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
UgdhMousecytosol is_active_inISOUniprotKB:O607012290270 PMID:36107941MGIPMID:36107941
UgdhMousenucleoplasm located_inIEAUniProtKB:O60701 and ensembl:ENSP000003195012290270 EnsemblGO_REF:0000107
UgdhMousenucleoplasm located_inISOUniProtKB:O607012290270 GO_CentralGO_REF:0000119
UgdhMousenucleus is_active_inIBAPANTHER:PTN000146693 and UniProtKB:O607012290270 GO_CentralGO_REF:0000033

Molecular Function

  

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
UgdhMouseamino sugar metabolic pathway  IEA 6907045 KEGGmmu:00520
UgdhMouseascorbate and aldarate metabolic pathway  IEA 6907045 KEGGmmu:00053
UgdhMousenucleotide sugar metabolic pathway  IEA 6907045 KEGGmmu:00520
UgdhMousepentose and glucuronate interconversion pathway  IEA 6907045 KEGGmmu:00040
UgdhMousestarch and sucrose metabolic pathway  IEA 6907045 KEGGmmu:00500

#
Reference Title
Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Molecular cloning and characterization of the human and mouse UDP-glucose dehydrogenase genes. Spicer AP, etal., J Biol Chem 1998 Sep 25;273(39):25117-24.
PMID:9753608   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14505572   PMID:14610273   PMID:14681479   PMID:15489334   PMID:15755804  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:16602821   PMID:17967808   PMID:18267097   PMID:18307411   PMID:18799693   PMID:21267068   PMID:21873635   PMID:22745308   PMID:22815472  
PMID:24859727   PMID:26295701   PMID:26336360   PMID:27829154   PMID:28378742   PMID:29530978   PMID:29791855   PMID:30550785   PMID:31162944   PMID:32325033   PMID:32768525   PMID:36107941  
PMID:36114006   PMID:37169760   PMID:37442135   PMID:37858159   PMID:38367236   PMID:38374152  



Ugdh
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39565,570,550 - 65,593,185 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl565,570,564 - 65,593,292 (-)EnsemblGRCm39 Ensembl
GRCm38565,413,207 - 65,435,842 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl565,413,221 - 65,435,949 (-)EnsemblGRCm38mm10GRCm38
MGSCv37565,804,460 - 65,827,081 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36565,692,356 - 65,714,977 (-)NCBIMGSCv36mm8
Celera562,689,905 - 62,712,959 (-)NCBICelera
Cytogenetic Map5C3.1NCBI
cM Map533.67NCBI
UGDH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38439,498,755 - 39,527,439 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl439,498,755 - 39,528,311 (-)EnsemblGRCh38hg38GRCh38
GRCh37439,500,375 - 39,529,059 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36439,176,770 - 39,205,606 (-)NCBINCBI36Build 36hg18NCBI36
Build 34439,322,945 - 39,351,539NCBI
Celera439,938,164 - 39,967,004 (-)NCBICelera
Cytogenetic Map4p14NCBI
HuRef438,825,375 - 38,854,230 (-)NCBIHuRef
CHM1_1439,499,802 - 39,528,655 (-)NCBICHM1_1
T2T-CHM13v2.0439,468,409 - 39,497,229 (-)NCBIT2T-CHM13v2.0
Ugdh
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81443,202,480 - 43,226,002 (+)NCBIGRCr8
mRatBN7.21442,848,704 - 42,872,351 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1442,848,854 - 42,872,354 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1443,202,670 - 43,226,148 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01444,502,588 - 44,526,066 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01442,982,708 - 43,006,181 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01444,479,614 - 44,502,845 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1444,479,614 - 44,502,845 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01444,299,226 - 44,322,226 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41445,542,781 - 45,570,961 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11445,545,171 - 45,573,352 (+)NCBI
Celera1441,999,555 - 42,023,022 (+)NCBICelera
Cytogenetic Map14p11NCBI
Ugdh
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554437,868,893 - 7,882,129 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554437,868,893 - 7,882,136 (+)NCBIChiLan1.0ChiLan1.0
UGDH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2339,688,142 - 39,716,993 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1439,880,751 - 39,909,008 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0433,827,532 - 33,856,204 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1439,679,915 - 39,708,215 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl439,681,300 - 39,708,215 (-)Ensemblpanpan1.1panPan2
UGDH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1372,935,532 - 72,964,151 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl372,839,920 - 72,963,208 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha375,481,824 - 75,511,112 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0373,708,348 - 73,737,653 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl373,553,586 - 73,737,645 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1372,974,965 - 73,004,279 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0373,121,242 - 73,150,553 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0373,507,747 - 73,537,066 (+)NCBIUU_Cfam_GSD_1.0
Ugdh
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528539,179,915 - 39,207,994 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364827,089,621 - 7,118,284 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364827,090,241 - 7,118,315 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UGDH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl830,725,288 - 30,759,326 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1830,725,281 - 30,759,359 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2832,340,313 - 32,374,310 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UGDH
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12710,781,324 - 10,810,595 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2710,781,502 - 10,810,817 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604757,174,192 - 57,202,679 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ugdh
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248704,782,252 - 4,799,703 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248704,768,307 - 4,801,333 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Ugdh
1465 total Variants

Predicted Target Of
Summary Value
Count of predictions:1041
Count of miRNA genes:532
Interacting mature miRNAs:648
Transcripts:ENSMUST00000031103, ENSMUST00000117542, ENSMUST00000125375, ENSMUST00000131263, ENSMUST00000134123, ENSMUST00000139402
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 41 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301843Listr1_mlisteriosis resistance 1 (mouse)Not determined56024608194246203Mouse
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined32133234100777931Mouse
1301010ahl2_mage related hearing loss 2 (mouse)Not determined56265056896650688Mouse
10043995Hbnr9_mHeligmosomoides bakeri nematode resistance 9 (mouse)Not determined53348866767488876Mouse
11041899Lmr24a_mleishmaniasis resistance 24a (mouse)552694462107321041Mouse
1300951Gbvq1_mgallstone bladder volume QTL 1 (mouse)Not determined53811168172111798Mouse
14746981Manh57_mmandible shape 57 (mouse)54716974281169742Mouse
1301845Lxw4_mlupus BXSB x NZW 4 (mouse)Not determined53569446269694594Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
10045972Tir5_mtrypanosome infection response 5 (mouse)Not determined563705442104387065Mouse

1 to 10 of 41 rows
Ugdh  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5C3.1UniSTS
cM Map538.0UniSTS
D5Mit15  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38565,422,974 - 65,423,122UniSTSGRCm38
MGSCv37565,814,213 - 65,814,361UniSTSGRCm37
Celera562,699,651 - 62,699,797UniSTS
Cytogenetic Map5C3.1UniSTS
cM Map539.0UniSTS
Whitehead Genetic526.2UniSTS
Whitehead_YAC5 UniSTS






1 to 18 of 18 rows
RefSeq Transcripts NM_009466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC136513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF061017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 18 of 18 rows

Ensembl Acc Id: ENSMUST00000031103   ⟹   ENSMUSP00000031103
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,570,564 - 65,593,292 (-)Ensembl
GRCm38.p6 Ensembl565,413,221 - 65,435,949 (-)Ensembl
Ensembl Acc Id: ENSMUST00000125375
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,570,567 - 65,582,817 (-)Ensembl
GRCm38.p6 Ensembl565,413,224 - 65,425,474 (-)Ensembl
Ensembl Acc Id: ENSMUST00000131263   ⟹   ENSMUSP00000118999
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,580,697 - 65,585,730 (-)Ensembl
GRCm38.p6 Ensembl565,423,354 - 65,428,387 (-)Ensembl
Ensembl Acc Id: ENSMUST00000139402
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,574,861 - 65,580,149 (-)Ensembl
GRCm38.p6 Ensembl565,417,518 - 65,422,806 (-)Ensembl
RefSeq Acc Id: NM_009466   ⟹   NP_033492
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,570,564 - 65,593,185 (-)NCBI
GRCm38565,413,221 - 65,435,842 (-)NCBI
MGSCv37565,804,460 - 65,827,081 (-)RGD
Celera562,689,905 - 62,712,959 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006503862   ⟹   XP_006503925
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,570,550 - 65,585,710 (-)NCBI
GRCm38565,413,207 - 65,428,377 (-)NCBI
Sequence:
RefSeq Acc Id: NP_033492   ⟸   NM_009466
- UniProtKB: O70475 (UniProtKB/Swiss-Prot),   Q3TS38 (UniProtKB/TrEMBL),   Q3TJ71 (UniProtKB/TrEMBL),   Q3TJE8 (UniProtKB/TrEMBL),   Q3UIZ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503925   ⟸   XM_006503862
- Peptide Label: isoform X1
- UniProtKB: O70475 (UniProtKB/Swiss-Prot),   Q3TS38 (UniProtKB/TrEMBL),   Q3TJ71 (UniProtKB/TrEMBL),   Q3TJE8 (UniProtKB/TrEMBL),   Q3UIZ1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000031103   ⟸   ENSMUST00000031103
Ensembl Acc Id: ENSMUSP00000118999   ⟸   ENSMUST00000131263
Name Modeler Protein Id AA Range Protein Structure
AF-O70475-F1-model_v2 AlphaFold O70475 1-493 view protein structure

RGD ID:6886770
Promoter ID:EPDNEW_M6836
Type:multiple initiation site
Name:Ugdh_2
Description:Mus musculus UDP-glucose dehydrogenase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6837  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38565,435,725 - 65,435,785EPDNEW
RGD ID:6886814
Promoter ID:EPDNEW_M6837
Type:initiation region
Name:Ugdh_1
Description:Mus musculus UDP-glucose dehydrogenase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6836  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38565,435,889 - 65,435,949EPDNEW
RGD ID:6838581
Promoter ID:MM_KWN:42383
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000070366
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36565,812,151 - 65,812,651 (-)MPROMDB
RGD ID:6838585
Promoter ID:MM_KWN:42384
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000070365,   OTTMUST00000070368
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36565,815,401 - 65,815,901 (-)MPROMDB
RGD ID:6838583
Promoter ID:MM_KWN:42385
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:OTTMUST00000070367
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36565,819,656 - 65,820,156 (-)MPROMDB
RGD ID:6838579
Promoter ID:MM_KWN:42386
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000117542,   OTTMUST00000070363
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36565,826,916 - 65,827,727 (-)MPROMDB


1 to 36 of 36 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000029201 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000031103 ENTREZGENE
  ENSMUST00000031103.14 UniProtKB/Swiss-Prot
Gene3D-CATH Cytochrome c1, transmembrane anchor, C-terminal UniProtKB/Swiss-Prot
  NAD(P)-binding Rossmann-like Domain UniProtKB/Swiss-Prot
InterPro 6-PGluconate_DH-like_C_sf UniProtKB/Swiss-Prot
  NAD(P)-bd_dom_sf UniProtKB/Swiss-Prot
  UDP-Glc/GDP-Man UniProtKB/Swiss-Prot
  UDP-Glc/GDP-Man_DH_C UniProtKB/Swiss-Prot
  UDP-Glc/GDP-Man_DH_C_sf UniProtKB/Swiss-Prot
  UDP-Glc/GDP-Man_DH_dimer UniProtKB/Swiss-Prot
  UDP-Glc/GDP-Man_DH_N UniProtKB/Swiss-Prot
  UDPglc_DH_euk UniProtKB/Swiss-Prot
KEGG Report mmu:22235 UniProtKB/Swiss-Prot
MGD MGI:1306785 ENTREZGENE
NCBI Gene 22235 ENTREZGENE
PANTHER PTHR11374 UniProtKB/Swiss-Prot
  UDP-GLUCOSE 6-DEHYDROGENASE UniProtKB/Swiss-Prot
Pfam UDPG_MGDP_dh UniProtKB/Swiss-Prot
  UDPG_MGDP_dh_C UniProtKB/Swiss-Prot
  UDPG_MGDP_dh_N UniProtKB/Swiss-Prot
PhenoGen Ugdh PhenoGen
PIRSF UDPglc_DH_euk UniProtKB/Swiss-Prot
  UDPglc_GDPman_dh UniProtKB/Swiss-Prot
SMART UDPG_MGDP_dh_C UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48179 UniProtKB/Swiss-Prot
  SSF51735 UniProtKB/Swiss-Prot
  SSF52413 UniProtKB/Swiss-Prot
UniProt D3YXP9_MOUSE UniProtKB/TrEMBL
  O70475 ENTREZGENE
  Q3TI06_MOUSE UniProtKB/TrEMBL
  Q3TJ71 ENTREZGENE, UniProtKB/TrEMBL
  Q3TJE8 ENTREZGENE, UniProtKB/TrEMBL
  Q3TS38 ENTREZGENE, UniProtKB/TrEMBL
  Q3UIZ1 ENTREZGENE, UniProtKB/TrEMBL
  UGDH_MOUSE UniProtKB/Swiss-Prot
1 to 36 of 36 rows