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ONTOLOGY REPORT - ANNOTATIONS

Term:spliceosomal snRNP complex
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Accession:GO:0097525 term browser browse the term
Definition:A small ribonucleoprotein complex involved in formation of the spliceosome.


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spliceosomal snRNP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prpf4 pre-mRNA splicing tri-snRNP complex factor 4 part_of ISO (PMID:25383878) RGD PMID:25383878 NCBI chr 5:75,859,934...75,873,924
Ensembl chr 5:75,859,924...75,873,919 		JBrowse link
spliceosomal tri-snRNP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926 		JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,856,698...8,859,113
Ensembl chr 7:8,856,489...8,859,119 		JBrowse link
G Prpf31 pre-mRNA processing factor 31 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826 		JBrowse link
G Snrpgl1 small nuclear ribonucleoprotein polypeptide G like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118
Ensembl chr 4:87,982,626...87,983,118 		JBrowse link
U1 snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G ENSRNOG00000064062 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr19:33,454,456...33,455,388 JBrowse link
G ENSRNOG00000066758 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr  X:14,995,412...14,996,454 JBrowse link
G LOC120099250 U1 small nuclear ribonucleoprotein C-like part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr  X:135,673,708...135,678,865 JBrowse link
G Luc7l LUC7-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:15,273,340...15,307,131
Ensembl chr10:15,273,348...15,303,112 		JBrowse link
G Luc7l2 LUC7-like 2 pre-mRNA splicing factor part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:67,287,593...67,347,986
Ensembl chr 4:67,287,640...67,347,964 		JBrowse link
G Luc7l3 LUC7-like 3 pre-mRNA splicing factor part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,240,050...79,276,555
Ensembl chr10:79,240,563...79,276,538 		JBrowse link
G Prpf39 pre-mRNA processing factor 39 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:83,088,981...83,113,826
Ensembl chr 6:83,088,986...83,113,825 		JBrowse link
G Prpf40a pre-mRNA processing factor 40 homolog A part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:37,625,585...37,689,859
Ensembl chr 3:37,627,690...37,690,886 		JBrowse link
G Prpf40b pre-mRNA processing factor 40 homolog B part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:130,392,611...130,454,053
Ensembl chr 7:130,432,112...130,454,052 		JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 part_of IDA
ISO
IBA		 (PMID:21113136), (PMID:23793891), (PMID:25555158), (PMID:33677607)
GO_REF:0000033		 RGD
GO_Central		 PMID:21113136 PMID:23793891 PMID:25555158 PMID:33677607 PMID:16502463 GO_REF:0000033, RGD:10448962 NCBI chr 1:95,856,038...95,876,434
Ensembl chr 1:95,856,036...95,876,392 		JBrowse link
G Snrpa small nuclear ribonucleoprotein polypeptide A part_of IDA
ISO
IBA		 (PMID:21113136), (PMID:23793891), (PMID:33677607)
GO_REF:0000033
(PMID:25555158)		 RGD
GO_Central		 PMID:21113136 PMID:23793891 PMID:25555158 PMID:33677607 PMID:16502463 GO_REF:0000033, RGD:10448962 NCBI chr 1:82,481,770...82,490,540
Ensembl chr 1:82,481,770...82,490,538 		JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 part_of IDA
ISO
IBA
ISS		 (PMID:21113136), (PMID:25555158), (PMID:33677607)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:21113136 PMID:25555158 PMID:33677607 PMID:8371979 GO_REF:0000024 GO_REF:0000033, RGD:1601359 NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339 		JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:130,399,239...130,408,821
Ensembl chr 3:130,399,248...130,408,812 		JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C part_of IDA
ISO
IBA
IEA
ISS		 (PMID:15312772), (PMID:15525645), (PMID:21113136), (PMID:33677607)
GO_REF:0000033
GO_REF:0000104
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:15312772 PMID:15525645 PMID:21113136 PMID:33677607 PMID:16502463 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104, RGD:10448962 NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide part_of IDA
ISO
IBA		 (PMID:21113136), (PMID:25555158), (PMID:33677607)
GO_REF:0000033		 RGD
GO_Central		 PMID:21113136 PMID:25555158 PMID:33677607 PMID:16502463 GO_REF:0000033, RGD:10448962 NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide part_of IDA
ISO
IBA		 (PMID:21113136), (PMID:25555158), (PMID:33677607)
GO_REF:0000033		 RGD
GO_Central		 PMID:21113136 PMID:25555158 PMID:33677607 PMID:16502463 GO_REF:0000033, RGD:10448962 NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide part_of IDA
ISO
IBA		 (PMID:21113136), (PMID:25555158), (PMID:33677607)
GO_REF:0000033		 RGD
GO_Central		 PMID:21113136 PMID:25555158 PMID:33677607 PMID:16502463 GO_REF:0000033, RGD:10448962 NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978 		JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E part_of IDA
ISO
IBA		 (PMID:21113136), (PMID:25555158), (PMID:33677607)
GO_REF:0000033		 RGD
GO_Central		 PMID:21113136 PMID:25555158 PMID:33677607 PMID:16502463 GO_REF:0000033, RGD:10448962 NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310
Ensembl chr 8:45,050,986...45,057,310 		JBrowse link
G Snrpepl2 small nuclear ribonucleoprotein polypeptide E like 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075 		JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F part_of IBA
ISO		 GO_REF:0000033
(PMID:21113136), (PMID:25555158), (PMID:33677607)		 GO_Central
RGD		 PMID:21113136 PMID:25555158 PMID:33677607 GO_REF:0000033 NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G part_of IDA
ISO
IBA		 (PMID:21113136), (PMID:25555158), (PMID:33677607)
GO_REF:0000033		 RGD
GO_Central		 PMID:21113136 PMID:25555158 PMID:33677607 PMID:16502463 GO_REF:0000033, RGD:10448962 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826 		JBrowse link
G Snrpgl1 small nuclear ribonucleoprotein polypeptide G like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118
Ensembl chr 4:87,982,626...87,983,118 		JBrowse link
G Snrpn small nuclear ribonucleoprotein polypeptide N part_of IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:8371979 GO_REF:0000033, RGD:1601359 NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634 		JBrowse link
G Zfp341 zinc finger protein 341 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249 		JBrowse link
U11/U12 snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sf3b1 splicing factor 3b, subunit 1 part_of ISO (PMID:11252167) RGD PMID:11252167 NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300 		JBrowse link
U2 snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G ENSRNOG00000064062 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr19:33,454,456...33,455,388 JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:134,935,426...134,949,607
Ensembl chr  X:134,935,426...134,949,607 		JBrowse link
G Phf5a PHD finger protein 5A part_of ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:12234937)		 UniProt
GO_Central
RGD		 PMID:12234937 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:113,378,469...113,385,035
Ensembl chr 7:113,378,471...113,385,460 		JBrowse link
G Rbmx2 RNA binding motif protein, X-linked 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:127,888,514...127,896,239
Ensembl chr  X:127,888,438...127,896,869 		JBrowse link
G Sf3a1 splicing factor 3A subunit 1 part_of ISO
IBA		 (PMID:10882114), (PMID:11533230), (PMID:23793891)
GO_REF:0000033		 RGD
GO_Central		 PMID:10882114 PMID:11533230 PMID:23793891 GO_REF:0000033 NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144 		JBrowse link
G Sf3a2 splicing factor 3A subunit 2 part_of ISO
IBA
ISS		 (PMID:11533230)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:11533230 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530 		JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 part_of ISO (PMID:11533230) RGD PMID:11533230 NCBI chr 5:136,967,713...136,987,345
Ensembl chr 5:136,967,691...136,987,361 		JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 part_of ISO
IBA		 (PMID:11252167)
GO_REF:0000033		 RGD
GO_Central		 PMID:11252167 GO_REF:0000033 NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300 		JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:202,570,423...202,590,774
Ensembl chr 1:202,570,423...202,590,759 		JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:38,782,749...38,820,271
Ensembl chr19:38,783,040...38,820,245 		JBrowse link
G Sf3b4 splicing factor 3B subunit 4 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:183,732,791...183,737,545
Ensembl chr 2:183,732,754...183,737,959 		JBrowse link
G Sf3b5 splicing factor 3b, subunit 5 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:7,357,040...7,357,752
Ensembl chr 1:7,350,731...7,357,839 		JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:27,826,044...27,835,086
Ensembl chr 6:27,826,029...27,835,156 		JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:119,641,402...119,654,653
Ensembl chr 1:119,638,481...119,654,653 		JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 part_of IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:8371979 GO_REF:0000033, RGD:1601359 NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339 		JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 part_of ISO (PMID:2951739) RGD PMID:2951739 NCBI chr 3:130,399,239...130,408,821
Ensembl chr 3:130,399,248...130,408,812 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978 		JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310
Ensembl chr 8:45,050,986...45,057,310 		JBrowse link
G Snrpepl2 small nuclear ribonucleoprotein polypeptide E like 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826 		JBrowse link
G Snrpgl1 small nuclear ribonucleoprotein polypeptide G like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118
Ensembl chr 4:87,982,626...87,983,118 		JBrowse link
G Snrpn small nuclear ribonucleoprotein polypeptide N part_of IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:8371979 GO_REF:0000033, RGD:1601359 NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634 		JBrowse link
G U2surp U2 snRNP-associated SURP domain containing part_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:96,018,932...96,075,795
Ensembl chr 8:96,022,957...96,075,691 		JBrowse link
G Zfp341 zinc finger protein 341 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249 		JBrowse link
U4 snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G Ddx39b DExD-box helicase 39B part_of ISO
IEA		 (PMID:18593880)
GO_REF:0000107		 RGD
Ensembl		 PMID:18593880 GO_REF:0000107 NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996 		JBrowse link
G ENSRNOG00000064062 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr19:33,454,456...33,455,388 JBrowse link
G Prpf31 pre-mRNA processing factor 31 part_of ISO
IBA		 (PMID:17412961)
GO_REF:0000033		 RGD
GO_Central		 PMID:17412961 GO_REF:0000033 NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873 		JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 part_of ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:21516107)		 UniProt
GO_Central
RGD		 PMID:21516107 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide part_of ISO
IBA		 (PMID:21516107)
GO_REF:0000033		 RGD
GO_Central		 PMID:21516107 GO_REF:0000033 NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide part_of ISO (PMID:21516107) RGD PMID:21516107 NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide part_of ISO
IBA		 (PMID:21516107)
GO_REF:0000033		 RGD
GO_Central		 PMID:21516107 GO_REF:0000033 NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978 		JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E part_of ISO
IBA		 (PMID:21516107)
GO_REF:0000033		 RGD
GO_Central		 PMID:21516107 GO_REF:0000033 NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310
Ensembl chr 8:45,050,986...45,057,310 		JBrowse link
G Snrpepl2 small nuclear ribonucleoprotein polypeptide E like 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075 		JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F part_of ISO (PMID:21516107) RGD PMID:21516107 NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G part_of ISO
IBA		 (PMID:21516107)
GO_REF:0000033		 RGD
GO_Central		 PMID:21516107 GO_REF:0000033 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826 		JBrowse link
G Snrpgl1 small nuclear ribonucleoprotein polypeptide G like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118
Ensembl chr 4:87,982,626...87,983,118 		JBrowse link
G Snrpn small nuclear ribonucleoprotein polypeptide N part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634 		JBrowse link
G Zfp341 zinc finger protein 341 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249 		JBrowse link
U4/U6 snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppih peptidylprolyl isomerase H part_of ISO (PMID:9570313) RGD PMID:9570313 NCBI chr 5:132,906,324...132,924,341
Ensembl chr 5:132,906,328...132,924,267 		JBrowse link
G Prpf4 pre-mRNA splicing tri-snRNP complex factor 4 part_of ISO (PMID:25383878), (PMID:9570313) RGD PMID:9570313 PMID:25383878 NCBI chr 5:75,859,934...75,873,924
Ensembl chr 5:75,859,924...75,873,919 		JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein located_in ISO (PMID:12032085) RGD PMID:12032085 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038 		JBrowse link
U4/U6 x U5 tri-snRNP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC126899.1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr19:40,146,975...40,147,500 JBrowse link
G Cd2bp2 Cd2 (cytoplasmic tail) binding protein 2 NOT|part_of ISO (PMID:15840814) RGD PMID:15840814 NCBI chr 1:181,809,399...181,815,269
Ensembl chr 1:181,809,406...181,813,448 		JBrowse link
G Ddx23 DEAD-box helicase 23 part_of ISO (PMID:30975767), (PMID:9409622) RGD PMID:9409622 PMID:30975767 NCBI chr 7:129,797,620...129,814,909
Ensembl chr 7:129,797,614...129,814,949 		JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 part_of IBA
ISO		 GO_REF:0000033
(PMID:23793891), (PMID:30975767)		 GO_Central
RGD		 PMID:23793891 PMID:30975767 GO_REF:0000033 NCBI chr10:87,804,893...87,852,181
Ensembl chr10:87,804,892...87,846,079 		JBrowse link
G ENSRNOG00000064062 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr19:33,454,456...33,455,388 JBrowse link
G ENSRNOG00000069332 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 2:89,339,501...89,339,701 JBrowse link
G Hars2 histidyl-tRNA synthetase 2, mitochondrial part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,398,790...28,408,075
Ensembl chr18:28,398,795...28,414,747 		JBrowse link
G Linc00176 long intergenic non-protein coding RNA 176 part_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:168,771,350...168,775,133
Ensembl chr 3:168,704,299...168,774,991 		JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA
ISO		 GO_REF:0000033
(PMID:10523320), (PMID:26912367), (PMID:30975767)		 GO_Central
RGD		 PMID:10523320 PMID:26912367 PMID:30975767 GO_REF:0000033 NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266 		JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA
ISO		 GO_REF:0000033
(PMID:10369684), (PMID:10523320), (PMID:26912367), (PMID:30975767)		 GO_Central
RGD		 PMID:10369684 PMID:10523320 PMID:26912367 PMID:30975767 GO_REF:0000033 NCBI chr 4:124,021,023...124,027,269
Ensembl chr 4:124,021,023...124,027,269 		JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated part_of ISO (PMID:26912367), (PMID:30975767) RGD PMID:26912367 PMID:30975767 NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926 		JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA
ISO		 GO_REF:0000033
(PMID:26912367), (PMID:30975767)		 GO_Central
RGD		 PMID:26912367 PMID:30975767 GO_REF:0000033 NCBI chr 4:85,951,073...85,954,289
Ensembl chr 6:104,652,477...104,654,165
Ensembl chr 4:104,652,477...104,654,165 		JBrowse link
G Lsm5l1 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:1,339,769...1,340,198
Ensembl chr16:1,339,784...1,340,056 		JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA
ISO		 GO_REF:0000033
(PMID:26912367), (PMID:30975767)		 GO_Central
RGD		 PMID:26912367 PMID:30975767 GO_REF:0000033 NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484
Ensembl chr19:42,114,032...42,116,484 		JBrowse link
G Lsm6l1 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:42,114,013...42,116,559
Ensembl chr13:42,114,032...42,116,484 		JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated part_of ISO (PMID:26912367), (PMID:30975767) RGD PMID:26912367 PMID:30975767 NCBI chr 7:8,856,698...8,859,113
Ensembl chr 7:8,856,489...8,859,119 		JBrowse link
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated part_of IBA
ISO		 GO_REF:0000033
(PMID:26912367), (PMID:30975767)		 GO_Central
RGD		 PMID:26912367 PMID:30975767 GO_REF:0000033 NCBI chr 4:47,306,259...47,312,125
Ensembl chr 4:47,306,295...47,314,293 		JBrowse link
G Ppih peptidylprolyl isomerase H part_of ISO (PMID:9570313) RGD PMID:9570313 NCBI chr 5:132,906,324...132,924,341
Ensembl chr 5:132,906,328...132,924,267 		JBrowse link
G Prpf18 pre-mRNA processing factor 18 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:73,630,560...73,661,210
Ensembl chr17:73,630,571...73,690,979 		JBrowse link
G Prpf3 pre-mRNA processing factor 3 part_of ISO
IBA		 (PMID:26912367)
GO_REF:0000033		 RGD
GO_Central		 PMID:26912367 GO_REF:0000033 NCBI chr 2:183,379,041...183,403,526
Ensembl chr 2:183,378,718...183,403,489 		JBrowse link
G Prpf31 pre-mRNA processing factor 31 part_of ISO (PMID:11867543), (PMID:23793891), (PMID:26912367), (PMID:30975767) RGD PMID:11867543 PMID:23793891 PMID:26912367 PMID:30975767 NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873 		JBrowse link
G Prpf4 pre-mRNA splicing tri-snRNP complex factor 4 part_of IBA
ISO		 GO_REF:0000033
(PMID:23793891), (PMID:30975767)		 GO_Central
RGD		 PMID:23793891 PMID:30975767 GO_REF:0000033 NCBI chr 5:75,859,934...75,873,924
Ensembl chr 5:75,859,924...75,873,919 		JBrowse link
G Prpf6 pre-mRNA processing factor 6 part_of IEA
ISO
IBA		 GO_REF:0000107
(PMID:10788320), (PMID:30975767)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:10788320 PMID:30975767 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 part_of ISO (PMID:23793891), (PMID:30975767) RGD PMID:23793891 PMID:30975767 NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606 		JBrowse link
G Rbm42 RNA binding motif protein 42 part_of ISO (PMID:30975767) RGD PMID:30975767 NCBI chr 1:85,898,618...85,908,569
Ensembl chr 1:85,898,625...85,908,573 		JBrowse link
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP part_of IEA
IBA
ISO		 GO_REF:0000002
GO_REF:0000033
(PMID:30975767)		 InterPro
GO_Central
RGD		 PMID:30975767 GO_REF:0000002 GO_REF:0000033 NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136 		JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein NOT|located_in ISO (PMID:12032085) RGD PMID:12032085 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038 		JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 part_of IEA
ISO		 GO_REF:0000107
(PMID:23793891), (PMID:30975767)		 Ensembl
RGD		 PMID:23793891 PMID:30975767 GO_REF:0000107 NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182 		JBrowse link
G Snrnp27 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 part_of ISO (PMID:30975767) RGD PMID:30975767 NCBI chr 4:119,123,676...119,133,234
Ensembl chr 4:119,121,877...119,133,234 		JBrowse link
G Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 part_of ISO (PMID:30975767) RGD PMID:30975767 NCBI chr 5:142,700,632...142,733,776
Ensembl chr 5:142,700,534...142,733,776 		JBrowse link
G Snrpa small nuclear ribonucleoprotein polypeptide A part_of ISO (PMID:30975767) RGD PMID:30975767 NCBI chr 1:82,481,770...82,490,540
Ensembl chr 1:82,481,770...82,490,538 		JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 part_of ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:26912367), (PMID:30975767)		 UniProt
GO_Central
RGD		 PMID:26912367 PMID:30975767 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide part_of ISO (PMID:26912367), (PMID:30975767) RGD PMID:26912367 PMID:30975767 NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide part_of IBA
ISO		 GO_REF:0000033
(PMID:26912367), (PMID:30975767)		 GO_Central
RGD		 PMID:26912367 PMID:30975767 GO_REF:0000033 NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide part_of ISO (PMID:26912367), (PMID:30975767) RGD PMID:26912367 PMID:30975767 NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978 		JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E part_of IBA
ISO		 GO_REF:0000033
(PMID:26912367), (PMID:30975767)		 GO_Central
RGD		 PMID:26912367 PMID:30975767 GO_REF:0000033 NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310
Ensembl chr 8:45,050,986...45,057,310 		JBrowse link
G Snrpepl2 small nuclear ribonucleoprotein polypeptide E like 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075 		JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F part_of ISO (PMID:26912367), (PMID:30975767) RGD PMID:26912367 PMID:30975767 NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G part_of ISO (PMID:26912367), (PMID:30975767) RGD PMID:26912367 PMID:30975767 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826 		JBrowse link
G Snrpn small nuclear ribonucleoprotein polypeptide N part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634 		JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 part_of ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:26912367), (PMID:30975767)		 UniProt
GO_Central
RGD		 PMID:26912367 PMID:30975767 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872
Ensembl chr 1:113,565,295...113,570,872 		JBrowse link
G Snu13l1 small nuclear ribonucleoprotein 13 like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:150,624,087...150,624,525
Ensembl chr  X:150,624,087...150,624,473 		JBrowse link
G Txnl4a thioredoxin-like 4A part_of ISO (PMID:26912367), (PMID:30975767) RGD PMID:26912367 PMID:30975767 NCBI chr18:73,659,107...73,674,893
Ensembl chr18:73,659,107...73,674,893 		JBrowse link
G Txnl4b thioredoxin-like 4B part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:37,530,157...37,539,827
Ensembl chr19:37,530,152...37,538,521 		JBrowse link
G Usp39 ubiquitin specific peptidase 39 part_of ISO (PMID:11350945), (PMID:26912367), (PMID:30975767) RGD PMID:11350945 PMID:26912367 PMID:30975767 NCBI chr 4:104,373,948...104,406,359
Ensembl chr 4:104,373,955...104,406,359 		JBrowse link
G Zfp341 zinc finger protein 341 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249 		JBrowse link
G Zmat2 zinc finger, matrin type 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,409,606...28,414,241
Ensembl chr18:28,398,795...28,414,747 		JBrowse link
U4atac snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prpf31 pre-mRNA processing factor 31 part_of ISO (PMID:21784869) RGD PMID:21784869 NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873 		JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 part_of ISS
ISO		 GO_REF:0000024
(PMID:21784869)		 UniProt
RGD		 PMID:21784869 GO_REF:0000024 NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872
Ensembl chr 1:113,565,295...113,570,872 		JBrowse link
U4atac/U6atac snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein NOT|located_in ISO (PMID:14749385) RGD PMID:14749385 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038 		JBrowse link
U5 snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G Cd2bp2 Cd2 (cytoplasmic tail) binding protein 2 part_of ISO
IBA		 (PMID:15840814)
GO_REF:0000033		 RGD
GO_Central		 PMID:15840814 GO_REF:0000033 NCBI chr 1:181,809,399...181,815,269
Ensembl chr 1:181,809,406...181,813,448 		JBrowse link
G Ddx23 DEAD-box helicase 23 part_of ISO (PMID:9539711) RGD PMID:9539711 NCBI chr 7:129,797,620...129,814,909
Ensembl chr 7:129,797,614...129,814,949 		JBrowse link
G ENSRNOG00000064062 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 Ensembl chr19:33,454,456...33,455,388 JBrowse link
G Linc00176 long intergenic non-protein coding RNA 176 part_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:168,771,350...168,775,133
Ensembl chr 3:168,704,299...168,774,991 		JBrowse link
G Prpf18 pre-mRNA processing factor 18 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:73,630,560...73,661,210
Ensembl chr17:73,630,571...73,690,979 		JBrowse link
G Prpf6 pre-mRNA processing factor 6 part_of ISO
IEA		 (PMID:10788320)
GO_REF:0000107		 RGD
Ensembl		 PMID:10788320 GO_REF:0000107 NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606 		JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 part_of ISO
IEA		 (PMID:9539711)
GO_REF:0000107		 RGD
Ensembl		 PMID:9539711 GO_REF:0000107 NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182 		JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978 		JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310
Ensembl chr 8:45,050,986...45,057,310 		JBrowse link
G Snrpepl2 small nuclear ribonucleoprotein polypeptide E like 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826 		JBrowse link
G Snrpgl1 small nuclear ribonucleoprotein polypeptide G like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118
Ensembl chr 4:87,982,626...87,983,118 		JBrowse link
G Snrpn small nuclear ribonucleoprotein polypeptide N part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634 		JBrowse link
G Tssc4 tumor suppressing subtransferable candidate 4 is_active_in
part_of		 ISO
IEA
ISS		 (PMID:35188580)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:35188580 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:198,251,986...198,254,810
Ensembl chr 1:198,235,487...198,254,980 		JBrowse link
G Txnl4a thioredoxin-like 4A part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr18:73,659,107...73,674,893
Ensembl chr18:73,659,107...73,674,893 		JBrowse link
G Txnl4b thioredoxin-like 4B part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:37,530,157...37,539,827
Ensembl chr19:37,530,152...37,538,521 		JBrowse link
G Zfp341 zinc finger protein 341 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249 		JBrowse link
U6 snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC126899.1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr19:40,146,975...40,147,500 JBrowse link
G Ddx39b DExD-box helicase 39B part_of ISO
IEA		 (PMID:18593880)
GO_REF:0000107		 RGD
Ensembl		 PMID:18593880 GO_REF:0000107 NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996 		JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266 		JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:124,021,023...124,027,269
Ensembl chr 4:124,021,023...124,027,269 		JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926 		JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:85,951,073...85,954,289
Ensembl chr 6:104,652,477...104,654,165
Ensembl chr 4:104,652,477...104,654,165 		JBrowse link
G Lsm5l1 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:1,339,769...1,340,198
Ensembl chr16:1,339,784...1,340,056 		JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484
Ensembl chr19:42,114,032...42,116,484 		JBrowse link
G Lsm6l1 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:42,114,013...42,116,559
Ensembl chr13:42,114,032...42,116,484 		JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,856,698...8,859,113
Ensembl chr 7:8,856,489...8,859,119 		JBrowse link
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:47,306,259...47,312,125
Ensembl chr 4:47,306,295...47,314,293 		JBrowse link
U6atac snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein located_in ISO (PMID:14749385) RGD PMID:14749385 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20827
    protein-containing complex 6555
      nuclear protein-containing complex 1275
        small nuclear ribonucleoprotein complex 84
          spliceosomal snRNP complex 76
            SL snRNP 0
            U1 snRNP 25
            U11 snRNP 0
            U11/U12 snRNP 1
            U12 snRNP 0
            U2 snRNP 27
            U4 snRNP 15
            U4/U6 snRNP 3
            U4atac snRNP 2
            U4atac/U6atac snRNP 1
            U5 snRNP 22
            U6 snRNP 11
            U6atac snRNP 1
            penta-snRNP complex 0
            spliceosomal tri-snRNP complex + 49
Path 2
Term Annotations click to browse term
  cellular_component 20827
    cellular anatomical structure 20627
      intracellular anatomical structure 15182
        intracellular organelle 13564
          intracellular membrane-bounded organelle 12005
            nucleus 7451
              nuclear protein-containing complex 1275
                small nuclear ribonucleoprotein complex 84
                  spliceosomal snRNP complex 76
                    SL snRNP 0
                    U1 snRNP 25
                    U11 snRNP 0
                    U11/U12 snRNP 1
                    U12 snRNP 0
                    U2 snRNP 27
                    U4 snRNP 15
                    U4/U6 snRNP 3
                    U4atac snRNP 2
                    U4atac/U6atac snRNP 1
                    U5 snRNP 22
                    U6 snRNP 11
                    U6atac snRNP 1
                    penta-snRNP complex 0
                    spliceosomal tri-snRNP complex + 49
paths to the root