Gene: Prpf4 (pre-mRNA processing factor 4) Rattus norvegicus
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Symbol: Prpf4
Name: pre-mRNA processing factor 4
Description: INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH retinitis pigmentosa 70 (ortholog); substance-related disorder (ortholog); FOUND IN Cajal body (ortholog); nuclear speck (ortholog); nucleus (ortholog); INTERACTS WITH 2,4-dinitrotoluene; 2-methoxyethanol; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC298095; PRP4 pre-mRNA processing factor 4 homolog; PRP4 pre-mRNA processing factor 4 homolog (yeast); U4/U6 small nuclear ribonucleoprotein Prp4
Orthologs:
Homo sapiens (human) : PRPF4 (pre-mRNA processing factor 4)  HGNC  Alliance
Mus musculus (house mouse) : Prpf4 (pre-mRNA processing factor 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prpf4 (pre-mRNA processing factor 4)
Pan paniscus (bonobo/pygmy chimpanzee) : PRPF4 (pre-mRNA processing factor 4)
Canis lupus familiaris (dog) : PRPF4 (pre-mRNA processing factor 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prpf4 (pre-mRNA processing factor 4)
Sus scrofa (pig) : PRPF4 (pre-mRNA processing factor 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0578,267,248 - 78,281,172 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0582,386,980 - 82,400,904 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4579,403,879 - 79,417,803 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1579,409,026 - 79,422,982 (+)NCBI
Celera574,801,540 - 74,815,464 (+)NCBICelera
Cytogenetic Map5q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Prpf4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311303
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE