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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of autophagy
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Accession:GO:0010508 term browser browse the term
Definition:Any process that activates, maintains or increases the rate of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.

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positive regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor ISO RGD PMID:22293957 RGD:7245565 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:24980959)
(PMID:21358617), (PMID:31123703)
(PMID:32333458)		 UniProt
RGD		 PMID:21358617 PMID:24980959 PMID:25117440 PMID:31123703 PMID:32333458 RGD:11552604 NCBI chrNW_004624767:1,967,002...2,160,102
Ensembl chrNW_004624767:1,966,898...2,160,465 		JBrowse link
G Atf6 activating transcription factor 6 acts_upstream_of_or_within ISO (PMID:28747345) MGI PMID:28747345 NCBI chrNW_004624826:189,899...412,540
Ensembl chrNW_004624826:190,131...412,197 		JBrowse link
G Atg101 autophagy related 101 involved_in ISO (PMID:19225151) ComplexPortal PMID:19225151 NCBI chrNW_004624816:255,443...261,636
Ensembl chrNW_004624816:255,432...262,151 		JBrowse link
G Atg13 autophagy related 13 involved_in ISO (PMID:19225151)
(PMID:29487085)		 ComplexPortal
UniProt		 PMID:19225151 PMID:29487085 NCBI chrNW_004624767:1,924,672...1,953,868 JBrowse link
G Atg16l1 autophagy related 16 like 1 involved_in ISO (PMID:30208760) ARUK-UCL PMID:30208760 NCBI chrNW_004624843:5,797,725...5,838,768
Ensembl chrNW_004624843:5,805,069...5,838,741 		JBrowse link
G Atg5 autophagy related 5 ISO RGD PMID:30715741 RGD:407445920 NCBI chrNW_004624780:15,987,483...16,124,158
Ensembl chrNW_004624780:15,987,397...16,124,151 		JBrowse link
G Atg7 autophagy related 7 ISO RGD PMID:22498478 PMID:24674959 PMID:25639566 PMID:33372336 RGD:11553823 RGD:11553824 RGD:407532701 RGD:407571673 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290 		JBrowse link
G Becn1 beclin 1 involved_in IEA
ISO		 Ensembl
RGD		 PMID:21490676 PMID:22498478 PMID:24674959 GO_REF:0000107 RGD:11553823 RGD:407532701 RGD:6483070 NCBI chrNW_004624795:1,386,154...1,406,314
Ensembl chrNW_004624795:1,385,756...1,405,714 		JBrowse link
G Ccny cyclin Y involved_in ISO (PMID:32098961) ComplexPortal PMID:32098961 NCBI chrNW_004624805:10,033,112...10,199,398 JBrowse link
G Cdk16 cyclin dependent kinase 16 involved_in ISO (PMID:32098961) ComplexPortal PMID:32098961 NCBI chrNW_004624887:3,986,218...3,998,379
Ensembl chrNW_004624887:3,986,217...3,999,000 		JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:22095288) ParkinsonsUK-UCL PMID:22095288 NCBI chrNW_004624809:9,585,426...9,794,582
Ensembl chrNW_004624809:9,586,225...9,793,208 		JBrowse link
G Dcn decorin involved_in ISO (PMID:23798385) CACAO PMID:23798385 NCBI chrNW_004624750:15,466,938...15,517,475
Ensembl chrNW_004624750:15,470,968...15,516,365 		JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:8,169,035...8,310,945
Ensembl chrNW_004624747:8,168,321...8,310,457 		JBrowse link
G Deptor DEP domain containing MTOR interacting protein involved_in ISO (PMID:22017875), (PMID:22017876), (PMID:22017877) UniProt PMID:22017875 PMID:22017876 PMID:22017877 NCBI chrNW_004624763:17,935,171...17,956,858
Ensembl chrNW_004624763:17,935,108...17,956,909 		JBrowse link
G Dhrsx dehydrogenase/reductase X-linked involved_in ISO (PMID:25076851) UniProt PMID:25076851 NCBI chrNW_004624834:929,478...1,053,851
Ensembl chrNW_004624834:927,152...1,053,855 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO RGD PMID:33372336 RGD:407571673 NCBI chrNW_004624828:913,001...948,826
Ensembl chrNW_004624828:914,141...948,831 		JBrowse link
G Endog endonuclease G involved_in ISO (PMID:33473107) UniProt PMID:33473107 NCBI chrNW_004624760:6,193,168...6,196,209
Ensembl chrNW_004624760:6,193,173...6,196,374 		JBrowse link
G Flcn folliculin involved_in ISO (PMID:25126726) ParkinsonsUK-UCL PMID:25126726 NCBI chrNW_004624849:4,157,683...4,179,724 JBrowse link
G Foxo1 forkhead box O1 involved_in ISO (PMID:20543840) UniProt PMID:20543840 NCBI chrNW_004624748:1,413,754...1,529,646
Ensembl chrNW_004624748:1,413,983...1,529,992 		JBrowse link
G Foxo3 forkhead box O3 involved_in ISO (PMID:18054315), (PMID:18054316) UniProt PMID:18054315 PMID:18054316 NCBI chrNW_004624780:13,621,733...13,740,399
Ensembl chrNW_004624780:13,622,948...13,740,374 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:22539723) UniProt PMID:22539723 NCBI chrNW_004624907:511,919...522,106
Ensembl chrNW_004624907:511,889...522,168 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (PMID:22539723)
(PMID:26160071)		 UniProt
BHF-UCL		 PMID:22539723 PMID:26160071 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:20819940) RGD
UniProt		 PMID:20819940 PMID:23604926 RGD:10402086 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:26451483) UniProt PMID:26451483 NCBI chrNW_004624736:25,099,061...25,099,746 JBrowse link
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:16888103)
(PMID:25891078), (PMID:29420192)
(PMID:16888103), (PMID:25891078), (PMID:28389568)
(PMID:19620982), (PMID:22874556), (PMID:24751652)		 UniProt PMID:16888103 PMID:19620982 PMID:22874556 PMID:24751652 PMID:25891078 More... NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:30704899)
(PMID:22539723)		 UniProt PMID:22539723 PMID:30704899 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:22012985)
(PMID:20457918)		 UniProt
BHF-UCL		 PMID:20457918 PMID:22012985 NCBI chrNW_004624778:106,594...279,325
Ensembl chrNW_004624778:108,761...279,230 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO RGD PMID:26581593 RGD:12879823 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 ISO RGD PMID:35078016 RGD:155804282 NCBI chrNW_004624799:3,554,644...3,623,317
Ensembl chrNW_004624799:3,554,678...3,622,289 		JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:1,035,172...1,047,632
Ensembl chrNW_004624824:1,035,094...1,047,678 		JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:26347139) UniProt PMID:26347139 NCBI chrNW_004624803:8,536,946...8,650,775
Ensembl chrNW_004624803:8,536,953...8,650,805 		JBrowse link
G Mtdh metadherin involved_in ISO (PMID:21127263) UniProt PMID:21127263 NCBI chrNW_004624763:4,905,261...4,967,014
Ensembl chrNW_004624763:4,905,044...4,967,014 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in ISO (PMID:19898471) UniProt PMID:19898471 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:19898471), (PMID:19966812) UniProt PMID:19898471 PMID:19966812 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Nprl2 NPR2 like, GATOR1 complex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:4,196,154...4,200,100
Ensembl chrNW_004624730:4,196,154...4,200,102 		JBrowse link
G Nprl3 NPR3 like, GATOR1 complex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624913:968,093...1,013,990
Ensembl chrNW_004624913:968,093...1,014,035 		JBrowse link
G Optn optineurin involved_in ISO (PMID:21617041) GO_Central PMID:21617041 NCBI chrNW_004624805:5,683,095...5,717,558
Ensembl chrNW_004624805:5,683,021...5,721,336 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of_or_within ISO (PMID:28747345) MGI PMID:28747345 NCBI chrNW_004624795:3,210,382...3,216,130
Ensembl chrNW_004624795:3,209,605...3,217,539 		JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha involved_in ISO (PMID:28910396) CACAO PMID:28910396 NCBI chrNW_004624766:8,698,836...8,834,928
Ensembl chrNW_004624766:8,701,642...8,776,578 		JBrowse link
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:17476689) UniProt PMID:17476689 NCBI chrNW_004624893:694,944...700,068
Ensembl chrNW_004624893:694,928...700,062 		JBrowse link
G Plekhf1 pleckstrin homology and FYVE domain containing 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624794:4,843,342...4,852,346
Ensembl chrNW_004624794:4,843,635...4,852,346 		JBrowse link
G Plk2 polo like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:811,320...817,401
Ensembl chrNW_004624759:811,316...817,474 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (PMID:26103054)
(PMID:21258367)
(PMID:22012985), (PMID:25891078)		 ParkinsonsUK-UCL
UniProt		 PMID:21258367 PMID:22012985 PMID:25891078 PMID:26103054 NCBI chrNW_004624759:14,143,439...14,174,971
Ensembl chrNW_004624759:14,142,956...14,171,718 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO (PMID:21258367) UniProt PMID:21258367 NCBI chrNW_004624862:3,443,720...3,496,078
Ensembl chrNW_004624862:3,450,078...3,496,142 		JBrowse link
G Prkd1 protein kinase D1 involved_in ISO (PMID:22095288) ParkinsonsUK-UCL PMID:22095288 NCBI chrNW_004624820:2,408,562...2,726,199
Ensembl chrNW_004624820:2,408,360...2,726,606 		JBrowse link
G Rb1cc1 RB1 inducible coiled-coil 1 involved_in ISO (PMID:19225151) ComplexPortal PMID:19225151 NCBI chrNW_004624735:2,778,191...2,860,762 JBrowse link
G Rnf152 ring finger protein 152 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624792:7,448,110...7,571,467
Ensembl chrNW_004624792:7,448,112...7,536,776 		JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (PMID:27853422) ARUK-UCL PMID:27853422 NCBI chrNW_004624770:10,592,304...10,731,640 JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:36359729) UniProt PMID:36359729 NCBI chrNW_004624730:74,187,981...74,277,857
Ensembl chrNW_004624730:74,187,995...74,277,200 		JBrowse link
G Sh3bp4 SH3 domain binding protein 4 involved_in ISO (PMID:22575674) UniProt PMID:22575674 NCBI chrNW_004624847:1,007,940...1,078,882
Ensembl chrNW_004624847:1,044,831...1,078,984 		JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 involved_in ISO (PMID:17891140) UniProt PMID:17891140 NCBI chrNW_004624742:10,845,333...10,883,705 JBrowse link
G Slc35d3 solute carrier family 35 member D3 involved_in ISO (PMID:27171858) UniProt PMID:27171858 NCBI chrNW_004624886:867,131...870,282
Ensembl chrNW_004624886:867,631...870,247 		JBrowse link
G Smo smoothened, frizzled class receptor ISO RGD PMID:31221056 RGD:150521664 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921 		JBrowse link
G Sqstm1 sequestosome 1 involved_in ISO (PMID:28871090) UniProt PMID:28871090 NCBI chrNW_004624733:42,689,454...42,700,916
Ensembl chrNW_004624733:42,691,841...42,700,916 		JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (PMID:23878245) ParkinsonsUK-UCL PMID:23878245 NCBI chrNW_004624828:7,444,339...7,466,926
Ensembl chrNW_004624828:7,445,069...7,467,298 		JBrowse link
G Svip small VCP interacting protein involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624766:13,724,052...13,751,774
Ensembl chrNW_004624766:13,744,230...13,751,725 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:28871090) UniProt PMID:28871090 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Tfeb transcription factor EB involved_in ISO (PMID:21617040), (PMID:22576015)
(PMID:23434374)		 UniProt PMID:21617040 PMID:22576015 PMID:23434374 NCBI chrNW_004624754:17,321,179...17,358,402
Ensembl chrNW_004624754:17,321,162...17,358,524 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:17658277) ParkinsonsUK-UCL PMID:17658277 NCBI chrNW_004624828:4,964,199...4,973,465
Ensembl chrNW_004624828:4,971,093...4,973,198 		JBrowse link
G Tmem59 transmembrane protein 59 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624934:456,221...485,343
Ensembl chrNW_004624934:456,202...489,575 		JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624763:2,278,751...2,297,149
Ensembl chrNW_004624763:2,277,794...2,296,423 		JBrowse link
G Tpcn1 two pore segment channel 1 involved_in ISO (PMID:22012985) ParkinsonsUK-UCL PMID:22012985 NCBI chrNW_004624747:19,179,378...19,237,799
Ensembl chrNW_004624747:19,179,575...19,236,206 		JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (PMID:26347139) UniProt PMID:26347139 NCBI chrNW_004624817:5,643,788...5,651,514
Ensembl chrNW_004624817:5,639,779...5,653,361 		JBrowse link
G Trim23 tripartite motif containing 23 involved_in ISO (PMID:28871090) UniProt PMID:28871090 NCBI chrNW_004624815:4,246,939...4,289,262
Ensembl chrNW_004624815:4,246,884...4,287,316 		JBrowse link
G Trim32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:18,577,764...18,600,869
Ensembl chrNW_004624760:18,585,279...18,599,659 		JBrowse link
G Trim65 tripartite motif containing 65 involved_in ISO (PMID:26347139) UniProt PMID:26347139 NCBI chrNW_004624801:5,779,009...5,783,542 JBrowse link
G Trim8 tripartite motif containing 8 involved_in ISO (PMID:26347139) UniProt PMID:26347139 NCBI chrNW_004624831:2,020,185...2,031,001
Ensembl chrNW_004624831:2,020,227...2,032,099 		JBrowse link
G Tsc2 TSC complex subunit 2 involved_in ISO (PMID:23878245) ParkinsonsUK-UCL PMID:23878245 NCBI chrNW_004624913:166,931...203,008
Ensembl chrNW_004624913:166,931...202,953 		JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO (PMID:23431188) UniProt PMID:23431188 NCBI chrNW_004624764:4,223,784...4,358,923
Ensembl chrNW_004624764:4,223,784...4,358,885 		JBrowse link
G Ufl1 UFM1 specific ligase 1 involved_in ISO (PMID:25952549) UniProt PMID:25952549 NCBI chrNW_004624810:8,804,330...8,832,460
Ensembl chrNW_004624810:8,805,964...8,832,358 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:27,680,994...27,697,342
Ensembl chrNW_004624747:27,681,033...27,695,966 		JBrowse link
G Usp20 ubiquitin specific peptidase 20 involved_in ISO (PMID:29487085) UniProt PMID:29487085 NCBI chrNW_004624760:5,568,763...5,594,519
Ensembl chrNW_004624760:5,568,761...5,594,510 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:23184933) UniProt PMID:23184933 NCBI chrNW_004624747:5,123,085...5,128,465 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:20,224,919...20,234,108
Ensembl chrNW_004624764:20,224,906...20,234,629 		JBrowse link
positive regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag3 BAG cochaperone 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:27,171,402...27,195,008
Ensembl chrNW_004624737:27,171,402...27,195,004 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:22017874) UniProt PMID:22017874 NCBI chrNW_004624741:1,566,380...1,635,365 JBrowse link
G Hspb8 heat shock protein family B (small) member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:14,383,600...14,397,440
Ensembl chrNW_004624747:14,383,421...14,397,528 		JBrowse link
G Htt huntingtin involved_in ISO (PMID:25686248) ParkinsonsUK-UCL PMID:25686248 NCBI chrNW_004624755:24,602,955...24,729,584
Ensembl chrNW_004624755:24,603,490...24,729,333 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:31857589) UniProt PMID:31857589 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164 		JBrowse link
G Zdhhc19 zinc finger DHHC-type palmitoyltransferase 19 involved_in ISO (PMID:37802024) UniProt PMID:37802024 NCBI chrNW_004624730:61,357,276...61,405,048
Ensembl chrNW_004624730:61,362,941...61,370,514 		JBrowse link
positive regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg2a autophagy related 2A involved_in ISO (PMID:30952800), (PMID:31271352) UniProt PMID:30952800 PMID:31271352 NCBI chrNW_004624767:21,480,320...21,507,934
Ensembl chrNW_004624767:21,488,404...21,507,528 		JBrowse link
G Atg7 autophagy related 7 ISO RGD PMID:33372336 RGD:407571673 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290 		JBrowse link
G Becn1 beclin 1 ISO RGD PMID:25561470 RGD:11561937 NCBI chrNW_004624795:1,386,154...1,406,314
Ensembl chrNW_004624795:1,385,756...1,405,714 		JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in ISO (PMID:21072319) BHF-UCL PMID:21072319 NCBI chrNW_004624772:4,873,473...4,950,868
Ensembl chrNW_004624772:4,873,468...4,953,655 		JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:7,997,803...8,044,758
Ensembl chrNW_004624760:7,998,107...8,032,972 		JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISO (PMID:25578879) ParkinsonsUK-UCL PMID:25578879 NCBI chrNW_004624796:5,963,005...6,113,081
Ensembl chrNW_004624796:5,962,999...6,113,087 		JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO (PMID:25578879) ParkinsonsUK-UCL PMID:25578879 NCBI chrNW_004624795:3,907,891...3,931,246
Ensembl chrNW_004624795:3,908,037...3,931,430 		JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO (PMID:25578879) ParkinsonsUK-UCL PMID:25578879 NCBI chrNW_004624802:10,359,891...10,370,931
Ensembl chrNW_004624802:10,359,888...10,370,909 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (PMID:25495476) GO_Central PMID:25495476 NCBI chrNW_004624732:34,450,616...34,593,675
Ensembl chrNW_004624732:34,450,630...34,593,675 		JBrowse link
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in ISO (PMID:25495476) GO_Central PMID:25495476 NCBI chrNW_004624835:3,764,480...3,826,271
Ensembl chrNW_004624835:3,765,114...3,826,155 		JBrowse link
G Ralb RAS like proto-oncogene B involved_in ISO (PMID:24056301) UniProt PMID:24056301 NCBI chrNW_004624732:24,804,794...24,841,744
Ensembl chrNW_004624732:24,803,311...24,821,038 		JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 involved_in ISO (PMID:21068542) UniProt PMID:21068542 NCBI chrNW_004624742:10,845,333...10,883,705 JBrowse link
G Snx18 sorting nexin 18 involved_in ISO (PMID:29437695) UniProt PMID:29437695 NCBI chrNW_004624759:4,851,014...4,879,365
Ensembl chrNW_004624759:4,850,555...4,879,478 		JBrowse link
G Snx30 sorting nexin family member 30 involved_in ISO (PMID:32513819) UniProt PMID:32513819 NCBI chrNW_004624760:22,138,646...22,261,392
Ensembl chrNW_004624760:22,144,510...22,261,296 		JBrowse link
G Snx4 sorting nexin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:1,522,467...1,585,793
Ensembl chrNW_004624731:1,522,098...1,586,066 		JBrowse link
G Snx7 sorting nexin 7 involved_in ISO (PMID:32513819) UniProt PMID:32513819 NCBI chrNW_004624857:1,253,148...1,365,322
Ensembl chrNW_004624857:1,252,995...1,365,308 		JBrowse link
G Trim32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:18,577,764...18,600,869
Ensembl chrNW_004624760:18,585,279...18,599,659 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO RGD PMID:23448468 RGD:13208863 NCBI chrNW_004624747:27,680,994...27,697,342
Ensembl chrNW_004624747:27,681,033...27,695,966 		JBrowse link
G Wdr45 WD repeat domain 45 involved_in ISO (PMID:31271352) UniProt PMID:31271352 NCBI chrNW_004624893:845,689...852,221
Ensembl chrNW_004624893:845,701...852,244 		JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:31271352) UniProt PMID:31271352 NCBI chrNW_004624870:3,487,814...3,518,206
Ensembl chrNW_004624870:3,486,375...3,518,193 		JBrowse link
positive regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 involved_in ISO (PMID:23708524) GO_Central PMID:23708524 NCBI chrNW_004624774:8,211,723...8,215,962
Ensembl chrNW_004624774:8,211,984...8,213,240 		JBrowse link
G Calcoco2 calcium binding and coiled-coil domain 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:5,259,976...5,281,958
Ensembl chrNW_004624795:5,265,141...5,283,719 		JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chrNW_004624824:8,174,653...8,400,760
Ensembl chrNW_004624824:8,174,610...8,400,723 		JBrowse link
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:74,923,072...74,982,882
Ensembl chrNW_004624730:74,923,027...74,982,990 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:16888103) UniProt PMID:16888103 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) HGNC PMID:28195531 NCBI chrNW_004624849:3,147,251...3,159,358
Ensembl chrNW_004624849:3,149,121...3,159,273 		JBrowse link
G Tom1 target of myb1 membrane trafficking protein involved_in ISO (PMID:23023224) UniProt PMID:23023224 NCBI chrNW_004624750:359,130...379,454
Ensembl chrNW_004624750:357,222...379,356 		JBrowse link
positive regulation of autophagy in response to ER overload term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l11 BCL2 like 11 ISO RGD PMID:25772147 RGD:13782257 NCBI chrNW_004624749:1,033,824...1,130,099
Ensembl chrNW_004624749:1,091,096...1,125,341 		JBrowse link
G Bid BH3 interacting domain death agonist ISO RGD PMID:25772147 RGD:13782257 NCBI chrNW_004624735:9,557,732...9,590,862
Ensembl chrNW_004624735:9,579,979...9,589,260 		JBrowse link
G Ddit3 DNA damage inducible transcript 3 ISO RGD PMID:25772147 RGD:13782257 NCBI chrNW_004624802:10,437,998...10,443,278 JBrowse link
positive regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 ISO RGD PMID:23698117 RGD:11561968 NCBI chrNW_004624737:14,848,355...14,863,731
Ensembl chrNW_004624737:14,848,350...14,862,965 		JBrowse link
G Fbxo7 F-box protein 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624750:1,977,666...1,997,408
Ensembl chrNW_004624750:1,977,761...1,997,231 		JBrowse link
positive regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo like kinase 3 involved_in ISO (PMID:27344333) ParkinsonsUK-UCL PMID:27344333 NCBI chrNW_004624906:678,517...693,644
Ensembl chrNW_004624906:688,707...693,326 		JBrowse link
positive regulation of lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 involved_in ISO (PMID:23708524) GO_Central PMID:23708524 NCBI chrNW_004624774:8,211,723...8,215,962
Ensembl chrNW_004624774:8,211,984...8,213,240 		JBrowse link
G Htt huntingtin involved_in ISO (PMID:25686248) ParkinsonsUK-UCL PMID:25686248 NCBI chrNW_004624755:24,602,955...24,729,584
Ensembl chrNW_004624755:24,603,490...24,729,333 		JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO (PMID:22958918) MGI PMID:22958918 NCBI chrNW_004624764:12,087,901...12,135,145
Ensembl chrNW_004624764:12,087,858...12,120,914 		JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chrNW_004624868:317,992...393,776
Ensembl chrNW_004624868:318,059...393,773 		JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chrNW_004624734:24,281,482...24,400,870 JBrowse link
positive regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 acts_upstream_of_or_within ISO (PMID:19273585) MGI PMID:19273585 NCBI chrNW_004624737:14,848,355...14,863,731
Ensembl chrNW_004624737:14,848,350...14,862,965 		JBrowse link
G Bnip3l BCL2 interacting protein 3 like acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19273585) MGI
Ensembl		 PMID:19273585 GO_REF:0000107 NCBI chrNW_004624758:21,284,165...21,309,957
Ensembl chrNW_004624758:21,284,167...21,310,398 		JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit involved_in ISO (PMID:27103069)
(PMID:27103069), (PMID:27334615)		 HGNC PMID:27103069 PMID:27334615 NCBI chrNW_004624736:31,737,606...31,787,900
Ensembl chrNW_004624736:31,751,268...31,788,253 		JBrowse link
G Dcn decorin acts_upstream_of_or_within ISO (PMID:23798385) MGI PMID:23798385 NCBI chrNW_004624750:15,466,938...15,517,475
Ensembl chrNW_004624750:15,470,968...15,516,365 		JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO (PMID:20453062) MGI PMID:20453062 NCBI chrNW_004624753:8,715,898...8,805,728
Ensembl chrNW_004624753:8,715,898...8,804,194 		JBrowse link
G Gnai3 G protein subunit alpha i3 involved_in ISO (PMID:12642577) UniProt PMID:12642577 NCBI chrNW_004624772:5,272,086...5,309,834 JBrowse link
G Gpsm1 G protein signaling modulator 1 involved_in ISO (PMID:12642577) UniProt PMID:12642577 NCBI chrNW_004624760:1,507,255...1,529,170
Ensembl chrNW_004624760:1,507,242...1,529,163 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19273585) Ensembl
MGI		 PMID:19273585 GO_REF:0000107 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705 		JBrowse link
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO (PMID:20705711) MGI PMID:20705711 NCBI chrNW_004624750:341,699...346,005
Ensembl chrNW_004624750:342,146...345,887 		JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO (PMID:23778976) ParkinsonsUK-UCL PMID:23778976 NCBI chrNW_004624946:997,571...1,015,748
Ensembl chrNW_004624946:996,814...1,013,379 		JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:26416964) UniProt PMID:26416964 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within ISO (PMID:23798385) MGI PMID:23798385 NCBI chrNW_004624761:14,330,224...14,380,680
Ensembl chrNW_004624761:14,330,489...14,379,051 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004624733:34,504,259...34,593,223
Ensembl chrNW_004624733:34,507,618...34,560,901 		JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (PMID:23778976) ParkinsonsUK-UCL PMID:23778976 NCBI chrNW_004624799:3,554,644...3,623,317
Ensembl chrNW_004624799:3,554,678...3,622,289 		JBrowse link
G Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004624784:12,583,430...12,619,816 JBrowse link
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:17476689) MGI PMID:17476689 NCBI chrNW_004624893:694,944...700,068
Ensembl chrNW_004624893:694,928...700,062 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:20871098) ParkinsonsUK-UCL PMID:20871098 NCBI chrNW_004624764:5,656,207...5,671,260
Ensembl chrNW_004624764:5,656,229...5,671,260 		JBrowse link
G Rab12 RAB12, member RAS oncogene family involved_in ISO (PMID:23357852) UniProt PMID:23357852 NCBI chrNW_004624770:17,636,031...17,654,863
Ensembl chrNW_004624770:17,635,901...17,653,919 		JBrowse link
G Rufy4 RUN and FYVE domain containing 4 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624823:6,908,113...6,927,724
Ensembl chrNW_004624823:6,908,636...6,925,863 		JBrowse link
G Scoc short coiled-coil protein involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004625006:15,912...23,559
Ensembl chrNW_004625006:15,933...23,559 		JBrowse link
G Sesn1 sestrin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624916:231,168...332,423
Ensembl chrNW_004624916:230,348...332,985 		JBrowse link
G Sesn2 sestrin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:12,087,901...12,135,145
Ensembl chrNW_004624764:12,087,858...12,120,914 		JBrowse link
G Sesn3 sestrin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:39,859,414...39,930,642
Ensembl chrNW_004624735:39,866,097...39,929,614 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18296641)
(PMID:18296641), (PMID:21189328)		 UniProt PMID:18296641 PMID:21189328 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004624794:12,766,734...12,791,590
Ensembl chrNW_004624794:12,766,806...12,804,611 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:27103069) HGNC PMID:27103069 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Trim13 tripartite motif containing 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624748:4,683,518...4,765,944 JBrowse link
G Tsc1 TSC complex subunit 1 ISO RGD PMID:23435171 RGD:10448950 NCBI chrNW_004624760:3,479,028...3,536,612
Ensembl chrNW_004624760:3,498,692...3,532,011 		JBrowse link
G Tsc2 TSC complex subunit 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:23778976)
(PMID:20453062)		 ParkinsonsUK-UCL
MGI		 PMID:20453062 PMID:23778976 NCBI chrNW_004624913:166,931...203,008
Ensembl chrNW_004624913:166,931...202,953 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004624805:6,813,100...6,898,686 JBrowse link
G Wdr24 WD repeat domain 24 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624913:1,496,029...1,501,822
Ensembl chrNW_004624913:1,496,029...1,501,800 		JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:30217973) UniProt PMID:30217973 NCBI chrNW_004624767:1,967,002...2,160,102
Ensembl chrNW_004624767:1,966,898...2,160,465 		JBrowse link
G Atg7 autophagy related 7 ISO RGD PMID:37042059 RGD:407532700 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290 		JBrowse link
G Cers1 ceramide synthase 1 involved_in ISO (PMID:22922758) UniProt PMID:22922758 NCBI chrNW_004624908:1,937,007...1,949,780
Ensembl chrNW_004624908:1,941,393...1,949,760 		JBrowse link
G Dele1 DAP3 binding cell death enhancer 1 involved_in ISO (PMID:38340717) UniProt PMID:38340717 NCBI chrNW_004624774:1,135,680...1,154,628
Ensembl chrNW_004624774:1,136,731...1,150,625 		JBrowse link
G Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 involved_in ISO (PMID:38340717) UniProt PMID:38340717 NCBI chrNW_004624740:31,223,583...31,306,749
Ensembl chrNW_004624740:31,274,483...31,306,430 		JBrowse link
G Fbxo7 F-box protein 7 involved_in ISO (PMID:26310625) ParkinsonsUK-UCL PMID:26310625 RGD:11536096 NCBI chrNW_004624750:1,977,666...1,997,408
Ensembl chrNW_004624750:1,977,761...1,997,231 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705 		JBrowse link
G Htt huntingtin involved_in ISO (PMID:25686248) ParkinsonsUK-UCL PMID:25686248 NCBI chrNW_004624755:24,602,955...24,729,584
Ensembl chrNW_004624755:24,603,490...24,729,333 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:21102437), (PMID:32939830)
(PMID:33510463)		 UniProt PMID:21102437 PMID:32939830 PMID:33510463 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:31919280) UniProt PMID:31919280 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:26310625) RGD
ParkinsonsUK-UCL		 PMID:26310625 PMID:28608965 RGD:13432560 NCBI chrNW_004624855:430,148...1,992,121
Ensembl chrNW_004624855:430,260...1,989,747 		JBrowse link
G Slc25a4 solute carrier family 25 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624769:15,989,527...15,993,609
Ensembl chrNW_004624769:15,989,547...15,997,680 		JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624895:3,472,810...3,475,713
Ensembl chrNW_004624895:3,472,791...3,477,568 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO PMID:29934347 UniProt PMID:29934347 RGD:405650300 NCBI chrNW_004624913:1,491,873...1,494,249
Ensembl chrNW_004624913:1,491,991...1,494,249 		JBrowse link
G Ube2a ubiquitin conjugating enzyme E2 A involved_in ISO (PMID:23685073) UniProt PMID:23685073 NCBI chrNW_004624895:3,544,410...3,553,981 JBrowse link
G Vps13d vacuolar protein sorting 13 homolog D involved_in ISO (PMID:29307555) UniProt PMID:29307555 NCBI chrNW_004624818:632,276...885,450
Ensembl chrNW_004624818:632,278...885,445 		JBrowse link
positive regulation of reticulophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISO (PMID:32851973)
(PMID:36543799)		 UniProt PMID:32851973 PMID:36543799 NCBI chrNW_004624795:4,594,131...4,602,435
Ensembl chrNW_004624795:4,594,207...4,602,583 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:36543799) UniProt PMID:36543799 NCBI chrNW_004624741:4,292,256...4,305,424
Ensembl chrNW_004624741:4,292,256...4,305,504 		JBrowse link
G Ufl1 UFM1 specific ligase 1 involved_in ISO (PMID:36543799) UniProt PMID:36543799 NCBI chrNW_004624810:8,804,330...8,832,460
Ensembl chrNW_004624810:8,805,964...8,832,358 		JBrowse link
positive regulation of type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) ParkinsonsUK-UCL PMID:24005319 NCBI chrNW_004624764:12,068,518...12,070,542
Ensembl chrNW_004624764:12,068,638...12,072,190 		JBrowse link
G Cdc37 cell division cycle 37, HSP90 cochaperone involved_in ISO (PMID:21855797) ParkinsonsUK-UCL PMID:21855797 NCBI chrNW_004624828:2,523,761...2,533,387
Ensembl chrNW_004624828:2,521,272...2,535,475 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:23707074) ARUK-UCL PMID:23707074 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327 		JBrowse link
G Hdac6 histone deacetylase 6 involved_in ISO (PMID:20457763) ParkinsonsUK-UCL PMID:20457763 NCBI chrNW_004624893:608,744...627,600
Ensembl chrNW_004624893:608,540...628,580 		JBrowse link
G Hk2 hexokinase 2 involved_in ISO (PMID:23962723) ParkinsonsUK-UCL PMID:23962723 NCBI chrNW_004624749:28,618,146...28,718,852
Ensembl chrNW_004624749:28,618,030...28,689,794 		JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISO (PMID:30217973) CACAO PMID:30217973 NCBI chrNW_004624909:745,141...891,421
Ensembl chrNW_004624909:745,651...859,233 		JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:5,560,071...5,566,763
Ensembl chrNW_004624764:5,557,560...5,586,964 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:20871098) ParkinsonsUK-UCL PMID:20871098 NCBI chrNW_004624764:5,656,207...5,671,260
Ensembl chrNW_004624764:5,656,229...5,671,260 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:20871098), (PMID:23212910)
(PMID:20457763)		 ParkinsonsUK-UCL PMID:20457763 PMID:20871098 PMID:23212910 NCBI chrNW_004624855:430,148...1,992,121
Ensembl chrNW_004624855:430,260...1,989,747 		JBrowse link
G Tomm7 translocase of outer mitochondrial membrane 7 involved_in ISO (PMID:24270810) ParkinsonsUK-UCL PMID:24270810 NCBI chrNW_004624739:7,854,226...7,863,387
Ensembl chrNW_004624739:7,853,621...7,864,757 		JBrowse link
G Vdac1 voltage dependent anion channel 1 involved_in ISO (PMID:32047033) UniProt PMID:32047033 NCBI chrNW_004624733:38,183,376...38,210,368
Ensembl chrNW_004624733:38,184,016...38,210,478 		JBrowse link
positive regulation of xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irgm immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:7,997,803...8,044,758
Ensembl chrNW_004624760:7,998,107...8,032,972 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004624782:13,150,824...13,158,327
Ensembl chrNW_004624782:13,152,039...13,159,113 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Optn optineurin involved_in ISO (PMID:21617041) ParkinsonsUK-UCL PMID:21617041 NCBI chrNW_004624805:5,683,095...5,717,558
Ensembl chrNW_004624805:5,683,021...5,721,336 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G Rnf31 ring finger protein 31 involved_in ISO (PMID:28481331) UniProt PMID:28481331 NCBI chrNW_004624820:8,376,530...8,388,596
Ensembl chrNW_004624820:8,375,871...8,388,569 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:21617041) ParkinsonsUK-UCL PMID:21617041 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15135
    cellular process 14753
      process utilizing autophagic mechanism 500
        autophagy 500
          positive regulation of autophagy 160
            positive regulation of autophagy in response to ER overload 3
            positive regulation of autophagy of mitochondrion + 27
            positive regulation of chaperone-mediated autophagy 1
            positive regulation of macroautophagy + 97
Path 2
Term Annotations click to browse term
  biological_process 15135
    biological regulation 10703
      regulation of biological process 10366
        regulation of cellular process 10038
          regulation of metabolic process 5523
            positive regulation of metabolic process 3455
              positive regulation of catabolic process 521
                positive regulation of autophagy 160
                  positive regulation of autophagy in response to ER overload 3
                  positive regulation of autophagy of mitochondrion + 27
                  positive regulation of chaperone-mediated autophagy 1
                  positive regulation of macroautophagy + 97
paths to the root