Tomm7 (translocase of outer mitochondrial membrane 7) - Rat Genome Database

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Gene: Tomm7 (translocase of outer mitochondrial membrane 7) Heterocephalus glaber
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Symbol: Tomm7
Name: translocase of outer mitochondrial membrane 7
RGD ID: 18919251
Description: INVOLVED IN positive regulation of type 2 mitophagy (ortholog); regulation of protein stability (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; mitochondrial autophagy pathway; ASSOCIATED WITH GARG-MISHRA PROGEROID SYNDROME (ortholog); hypomyelinating leukodystrophy 5 (ortholog); pleomorphic xanthoastrocytoma (ortholog); FOUND IN mitochondrial outer membrane (inferred); mitochondrial outer membrane translocase complex (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mitochondrial import receptor subunit TOM7 homolog; Mitochondrial import receptor subunit TOM7-like protein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247397,853,621 - 7,864,757 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247397,854,226 - 7,863,387 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074  


Genomics

Comparative Map Data
Tomm7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247397,853,621 - 7,864,757 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247397,854,226 - 7,863,387 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
TOMM7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38722,812,974 - 22,822,849 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl722,812,628 - 22,822,849 (-)EnsemblGRCh38hg38GRCh38
GRCh37722,852,593 - 22,862,468 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36722,818,776 - 22,828,946 (-)NCBINCBI36Build 36hg18NCBI36
Build 34722,625,493 - 22,635,661NCBI
Celera722,837,876 - 22,848,044 (-)NCBICelera
Cytogenetic Map7p15.3NCBI
HuRef722,735,367 - 22,745,588 (-)NCBIHuRef
CHM1_1722,853,157 - 22,863,376 (-)NCBICHM1_1
T2T-CHM13v2.0722,948,907 - 22,958,779 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2722,903,376 - 22,913,595 (-)NCBI
Tomm7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39524,043,942 - 24,049,143 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl524,043,942 - 24,049,159 (-)EnsemblGRCm39 Ensembl
GRCm38523,838,944 - 23,844,145 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl523,838,944 - 23,844,161 (-)EnsemblGRCm38mm10GRCm38
MGSCv37523,344,762 - 23,349,963 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36523,349,719 - 23,354,172 (-)NCBIMGSCv36mm8
Celera520,790,590 - 20,795,798 (-)NCBICelera
Cytogenetic Map5A3NCBI
cM Map510.48NCBI
Tomm7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8412,197,503 - 12,204,344 (+)NCBIGRCr8
mRatBN7.2411,305,122 - 11,311,963 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl411,305,110 - 11,311,962 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx416,456,675 - 16,463,543 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0412,281,753 - 12,288,658 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0410,628,651 - 10,635,519 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.047,835,949 - 7,842,790 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl47,835,949 - 7,842,789 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.047,844,007 - 7,850,848 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.446,675,775 - 6,682,616 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera46,919,104 - 6,925,945 (+)NCBICelera
Cytogenetic Map4q11NCBI
Tomm7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541025,157,860 - 25,166,898 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541025,157,860 - 25,166,898 (-)NCBIChiLan1.0ChiLan1.0
TOMM7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2627,679,302 - 27,689,182 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1776,004,028 - 76,013,912 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0723,501,438 - 23,511,321 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1723,112,630 - 23,122,195 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl723,112,630 - 23,122,195 (-)Ensemblpanpan1.1panPan2
TOMM7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11436,523,707 - 36,532,180 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1436,523,707 - 36,532,291 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1436,064,815 - 36,073,285 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01436,448,151 - 36,456,622 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1436,446,035 - 36,457,537 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11436,569,183 - 36,577,658 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01436,265,841 - 36,274,316 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01436,602,729 - 36,611,207 (-)NCBIUU_Cfam_GSD_1.0
Tomm7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511880,819,056 - 80,825,218 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647830,666 - 37,062 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647830,787 - 36,952 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TOMM7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl991,570,065 - 91,579,015 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1991,570,069 - 91,578,991 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29100,959,712 - 100,968,629 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TOMM7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12135,485,860 - 35,496,281 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2135,485,685 - 35,497,325 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604269,090,185 - 69,100,606 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000009641   ⟹   ENSHGLP00000009534
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247397,853,621 - 7,864,757 (+)Ensembl
RefSeq Acc Id: XM_013070289   ⟹   XP_012925743
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247397,854,226 - 7,863,387 (+)NCBI
Protein Sequences
Protein RefSeqs XP_012925743 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB06509 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000009534
  ENSHGLP00100061153
GenBank Protein JAO03240 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_012925743   ⟸   XM_013070289
- UniProtKB: A0A0P6JH28 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000009534   ⟸   ENSHGLT00000009641


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000006840 Ensembl, UniProtKB/TrEMBL
  ENSHGLG00100042316 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000009641 UniProtKB/TrEMBL
  ENSHGLT00100074630 UniProtKB/TrEMBL
InterPro Tom7 UniProtKB/TrEMBL
NCBI Gene Tomm7 ENTREZGENE
PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7 HOMOLOG UniProtKB/TrEMBL
  MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7 HOMOLOG UniProtKB/TrEMBL
Pfam Tom7 UniProtKB/TrEMBL
UniProt A0A0P6JH28 ENTREZGENE, UniProtKB/TrEMBL