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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:glycerophospholipid metabolic pathway
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Accession:PW:0000354 term browser browse the term
Definition:Those metabolic reactions involved in the synthesis, utilization and/or degradation of glycerophospholipids, also known as phospholipids. They are key components of membranes and some are also involved in signaling.
Synonyms:related_synonym: glycerophospholipid metabolic process;   phospholipid metabolic pathway


show annotations for term's descendants           Sort by:
glycerophospholipid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACHE acetylcholinesterase (Yt blood group) IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr 7:100,889,994...100,896,994
Ensembl chr 7:100,889,994...100,896,974 		JBrowse link
G AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr 6:32,168,212...32,178,108
Ensembl chr 6:32,168,212...32,178,096 		JBrowse link
G AGPAT2 1-acylglycerol-3-phosphate O-acyltransferase 2 IEA KEGG hsa:00564 NCBI chr 9:136,673,143...136,687,457
Ensembl chr 9:136,673,143...136,687,457 		JBrowse link
G AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 IEA KEGG hsa:00564 NCBI chr21:43,865,223...43,987,592
Ensembl chr21:43,865,223...43,987,592 		JBrowse link
G AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 IEA KEGG hsa:00564 NCBI chr 6:161,129,967...161,274,061
Ensembl chr 6:161,129,967...161,274,061 		JBrowse link
G CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr16:29,858,357...29,863,226
Ensembl chr16:29,858,357...29,863,414 		JBrowse link
G CDS1 CDP-diacylglycerol synthase 1 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr 4:84,583,127...84,651,334
Ensembl chr 4:84,583,127...84,651,334 		JBrowse link
G CDS2 CDP-diacylglycerol synthase 2 IEA KEGG hsa:00564 NCBI chr20:5,127,008...5,197,887
Ensembl chr20:5,126,879...5,197,887 		JBrowse link
G CEPT1 choline/ethanolamine phosphotransferase 1 IEA KEGG hsa:00564 NCBI chr 1:111,139,499...111,185,104
Ensembl chr 1:111,139,479...111,185,104 		JBrowse link
G CHAT choline O-acetyltransferase IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr10:49,609,095...49,667,942
Ensembl chr10:49,609,095...49,667,942 		JBrowse link
G CHKA choline kinase alpha IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr11:68,052,859...68,121,388
Ensembl chr11:68,052,859...68,121,444 		JBrowse link
G CHKB choline kinase beta IEA KEGG hsa:00564 NCBI chr22:50,578,963...50,582,849
Ensembl chr22:50,578,959...50,601,455 		JBrowse link
G CHPT1 choline phosphotransferase 1 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr12:101,697,640...101,729,074
Ensembl chr12:101,696,947...101,744,140 		JBrowse link
G CRLS1 cardiolipin synthase 1 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr20:6,005,938...6,040,053
Ensembl chr20:6,006,093...6,040,053 		JBrowse link
G DGKA diacylglycerol kinase alpha IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr12:55,927,316...55,954,023
Ensembl chr12:55,927,319...55,954,027 		JBrowse link
G DGKB diacylglycerol kinase beta IEA KEGG hsa:00564 NCBI chr 7:14,145,049...14,974,858
Ensembl chr 7:14,145,049...14,974,777 		JBrowse link
G DGKD diacylglycerol kinase delta IEA KEGG hsa:00564 NCBI chr 2:233,354,494...233,472,098
Ensembl chr 2:233,354,494...233,472,104 		JBrowse link
G DGKE diacylglycerol kinase epsilon IEA KEGG hsa:00564 NCBI chr17:56,834,151...56,869,567
Ensembl chr17:56,834,107...56,869,567 		JBrowse link
G DGKG diacylglycerol kinase gamma IEA KEGG hsa:00564 NCBI chr 3:186,147,201...186,362,234
Ensembl chr 3:186,105,668...186,362,234 		JBrowse link
G DGKH diacylglycerol kinase eta IEA KEGG hsa:00564 NCBI chr13:42,040,070...42,256,584
Ensembl chr13:42,040,036...42,256,578 		JBrowse link
G DGKI diacylglycerol kinase iota IEA KEGG hsa:00564 NCBI chr 7:137,381,037...137,846,974
Ensembl chr 7:137,381,037...137,847,092 		JBrowse link
G DGKQ diacylglycerol kinase theta IEA KEGG hsa:00564 NCBI chr 4:958,887...973,569
Ensembl chr 4:958,887...986,895 		JBrowse link
G DGKZ diacylglycerol kinase zeta IEA KEGG hsa:00564 NCBI chr11:46,332,926...46,380,554
Ensembl chr11:46,332,905...46,380,554 		JBrowse link
G ETNK1 ethanolamine kinase 1 IEA KEGG hsa:00564 NCBI chr12:22,625,171...22,690,665
Ensembl chr12:22,625,075...22,690,665 		JBrowse link
G ETNK2 ethanolamine kinase 2 IEA KEGG hsa:00564 NCBI chr 1:204,131,062...204,152,044
Ensembl chr 1:204,131,062...204,152,044 		JBrowse link
G GDE1 glycerophosphodiester phosphodiesterase 1 EXP SMPDB SMP:00025 NCBI chr16:19,501,693...19,522,098
Ensembl chr16:19,501,693...19,522,123 		JBrowse link
G GNPAT glyceronephosphate O-acyltransferase IEA KEGG hsa:00564 NCBI chr 1:231,241,212...231,277,973
Ensembl chr 1:231,241,207...231,277,973 		JBrowse link
G GPAM glycerol-3-phosphate acyltransferase, mitochondrial IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr10:112,149,865...112,227,677
Ensembl chr10:112,149,865...112,215,377 		JBrowse link
G GPAT2 glycerol-3-phosphate acyltransferase 2, mitochondrial IEA KEGG hsa:00564 NCBI chr 2:96,021,946...96,036,265
Ensembl chr 2:96,021,946...96,039,451 		JBrowse link
G GPAT3 glycerol-3-phosphate acyltransferase 3 IEA KEGG hsa:00564 NCBI chr 4:83,535,587...83,605,875
Ensembl chr 4:83,535,914...83,605,875 		JBrowse link
G GPAT4 glycerol-3-phosphate acyltransferase 4 IEA KEGG hsa:00564 NCBI chr 8:41,578,200...41,625,001
Ensembl chr 8:41,577,187...41,625,001 		JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr12:50,104,008...50,111,313
Ensembl chr12:50,103,982...50,111,313 		JBrowse link
G GPD1L glycerol-3-phosphate dehydrogenase 1 like IEA KEGG hsa:00564 NCBI chr 3:32,106,620...32,168,709
Ensembl chr 3:32,105,689...32,168,709 		JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr 2:156,400,281...156,586,403
Ensembl chr 2:156,435,290...156,613,735 		JBrowse link
G JMJD7-PLA2G4B JMJD7-PLA2G4B readthrough IEA KEGG hsa:00564 NCBI chr15:41,828,092...41,848,143
Ensembl chr15:41,828,095...41,848,155 		JBrowse link
G LCAT lecithin-cholesterol acyltransferase IEA KEGG hsa:00564 NCBI chr16:67,939,750...67,944,120
Ensembl chr16:67,939,750...67,944,131 		JBrowse link
G LCLAT1 lysocardiolipin acyltransferase 1 IEA KEGG hsa:00564 NCBI chr 2:30,447,246...30,644,225
Ensembl chr 2:30,447,226...30,644,225 		JBrowse link
G LPCAT1 lysophosphatidylcholine acyltransferase 1 IEA KEGG hsa:00564 NCBI chr 5:1,461,427...1,523,960
Ensembl chr 5:1,456,480...1,524,282 		JBrowse link
G LPCAT2 lysophosphatidylcholine acyltransferase 2 IEA KEGG hsa:00564 NCBI chr16:55,509,072...55,586,666
Ensembl chr16:55,509,072...55,586,666 		JBrowse link
G LPCAT3 lysophosphatidylcholine acyltransferase 3 IEA KEGG hsa:00564 NCBI chr12:6,976,185...7,018,476
Ensembl chr12:6,976,185...7,018,477 		JBrowse link
G LPCAT4 lysophosphatidylcholine acyltransferase 4 IEA KEGG hsa:00564 NCBI chr15:34,358,633...34,367,196
Ensembl chr15:34,358,633...34,367,196 		JBrowse link
G LPGAT1 lysophosphatidylglycerol acyltransferase 1 IEA KEGG hsa:00564 NCBI chr 1:211,743,457...211,830,763
Ensembl chr 1:211,743,457...211,830,763 		JBrowse link
G LYPLA1 lysophospholipase 1 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr 8:54,042,987...54,101,947
Ensembl chr 8:54,046,367...54,102,017 		JBrowse link
G LYPLA2 lysophospholipase 2 IEA KEGG hsa:00564 NCBI chr 1:23,791,145...23,795,539
Ensembl chr 1:23,791,110...23,795,539 		JBrowse link
G MBOAT1 membrane bound O-acyltransferase domain containing 1 IEA KEGG hsa:00564 NCBI chr 6:20,099,684...20,212,469
Ensembl chr 6:20,099,684...20,212,469 		JBrowse link
G MBOAT2 membrane bound O-acyltransferase domain containing 2 IEA KEGG hsa:00564 NCBI chr 2:8,852,690...9,003,684
Ensembl chr 2:8,852,690...9,003,709 		JBrowse link
G MBOAT7 membrane bound O-acyltransferase domain containing 7 IEA KEGG hsa:00564 NCBI chr19:54,173,415...54,189,580
Ensembl chr19:54,173,412...54,189,882 		JBrowse link
G PCYT1A phosphate cytidylyltransferase 1A, choline IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr 3:196,234,368...196,287,726
Ensembl chr 3:196,214,222...196,287,957 		JBrowse link
G PCYT1B phosphate cytidylyltransferase 1B, choline IEA KEGG hsa:00564 NCBI chr  X:24,558,087...24,672,887
Ensembl chr  X:24,558,087...24,672,677 		JBrowse link
G PCYT2 phosphate cytidylyltransferase 2, ethanolamine IEA KEGG hsa:00564 NCBI chr17:81,900,958...81,911,399
Ensembl chr17:81,900,958...81,911,432 		JBrowse link
G PEMT phosphatidylethanolamine N-methyltransferase IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr17:17,505,563...17,592,142
Ensembl chr17:17,505,563...17,591,708 		JBrowse link
G PGS1 phosphatidylglycerophosphate synthase 1 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr17:78,378,649...78,424,659
Ensembl chr17:78,378,649...78,425,114 		JBrowse link
G PHOSPHO1 phosphoethanolamine/phosphocholine phosphatase 1 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr17:49,223,366...49,230,787
Ensembl chr17:49,223,366...49,230,787 		JBrowse link
G PISD phosphatidylserine decarboxylase IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr22:31,618,491...31,662,564
Ensembl chr22:31,618,491...31,662,221 		JBrowse link
G PLA2G10 phospholipase A2 group X IEA KEGG hsa:00564 NCBI chr16:14,672,548...14,701,850
Ensembl chr16:14,672,548...14,694,308 		JBrowse link
G PLA2G12A phospholipase A2 group XIIA IEA KEGG hsa:00564 NCBI chr 4:109,709,989...109,730,070
Ensembl chr 4:109,709,989...109,730,070 		JBrowse link
G PLA2G12B phospholipase A2 group XIIB IEA KEGG hsa:00564 NCBI chr10:72,934,762...72,954,806
Ensembl chr10:72,934,762...72,954,806 		JBrowse link
G PLA2G15 phospholipase A2 group XV IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr16:68,245,373...68,261,058
Ensembl chr16:68,245,304...68,261,058 		JBrowse link
G PLA2G1B phospholipase A2 group IB IEA KEGG hsa:00564 NCBI chr12:120,322,115...120,327,779
Ensembl chr12:120,322,115...120,327,779 		JBrowse link
G PLA2G2A phospholipase A2 group IIA IEA KEGG hsa:00564 NCBI chr 1:19,975,431...19,980,434
Ensembl chr 1:19,975,431...19,980,416 		JBrowse link
G PLA2G2C phospholipase A2 group IIC IEA KEGG hsa:00564 NCBI chr 1:20,163,055...20,186,518
Ensembl chr 1:20,161,253...20,186,518 		JBrowse link
G PLA2G2D phospholipase A2 group IID IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr 1:20,111,939...20,119,536
Ensembl chr 1:20,111,939...20,119,566 		JBrowse link
G PLA2G2E phospholipase A2 group IIE IEA KEGG hsa:00564 NCBI chr 1:19,920,009...19,923,617
Ensembl chr 1:19,920,009...19,923,617 		JBrowse link
G PLA2G2F phospholipase A2 group IIF IEA KEGG hsa:00564 NCBI chr 1:20,139,323...20,150,381
Ensembl chr 1:20,139,323...20,150,381 		JBrowse link
G PLA2G3 phospholipase A2 group III IEA KEGG hsa:00564 NCBI chr22:31,134,807...31,140,508
Ensembl chr22:31,134,807...31,140,508 		JBrowse link
G PLA2G4A phospholipase A2 group IVA IEA KEGG hsa:00564 NCBI chr 1:186,828,949...186,988,981
Ensembl chr 1:186,828,949...186,988,981 		JBrowse link
G PLA2G4B phospholipase A2 group IVB IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr15:41,838,847...41,848,143
Ensembl chr15:41,837,775...41,848,147 		JBrowse link
G PLA2G4E phospholipase A2 group IVE IEA KEGG hsa:00564 NCBI chr15:41,981,582...42,050,703
Ensembl chr15:41,981,394...42,051,190 		JBrowse link
G PLA2G5 phospholipase A2 group V IEA KEGG hsa:00564 NCBI chr 1:20,028,408...20,091,911
Ensembl chr 1:20,028,179...20,091,911 		JBrowse link
G PLA2G6 phospholipase A2 group VI IEA KEGG hsa:00564 NCBI chr22:38,111,495...38,181,830
Ensembl chr22:38,111,495...38,214,778 		JBrowse link
G PLB1 phospholipase B1 IEA KEGG hsa:00564 NCBI chr 2:28,496,060...28,644,142
Ensembl chr 2:28,457,145...28,644,142 		JBrowse link
G PLD1 phospholipase D1 IEA KEGG hsa:00564 NCBI chr 3:171,600,404...171,810,483
Ensembl chr 3:171,600,404...171,810,950 		JBrowse link
G PLD2 phospholipase D2 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr17:4,807,152...4,823,430
Ensembl chr17:4,807,152...4,823,434 		JBrowse link
G PLPP1 phospholipid phosphatase 1 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr 5:55,424,854...55,534,964
Ensembl chr 5:55,424,854...55,534,969 		JBrowse link
G PLPP2 phospholipid phosphatase 2 IEA KEGG hsa:00564 NCBI chr19:281,043...291,403
Ensembl chr19:281,040...291,403 		JBrowse link
G PLPP3 phospholipid phosphatase 3 IEA KEGG hsa:00564 NCBI chr 1:56,494,761...56,579,563
Ensembl chr 1:56,494,761...56,645,301 		JBrowse link
G PNPLA6 patatin like phospholipase domain containing 6 IEA KEGG hsa:00564 NCBI chr19:7,534,164...7,561,767
Ensembl chr19:7,534,004...7,561,764 		JBrowse link
G PNPLA7 patatin like phospholipase domain containing 7 IEA KEGG hsa:00564 NCBI chr 9:137,459,952...137,550,402
Ensembl chr 9:137,459,952...137,550,402 		JBrowse link
G PTDSS1 phosphatidylserine synthase 1 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr 8:96,261,902...96,336,995
Ensembl chr 8:96,261,902...96,336,995 		JBrowse link
G PTDSS2 phosphatidylserine synthase 2 IEA
EXP		 KEGG
SMPDB		 SMP:00025 hsa:00564 NCBI chr11:448,268...491,399
Ensembl chr11:448,268...491,399 		JBrowse link
G PTPMT1 protein tyrosine phosphatase mitochondrial 1 EXP SMPDB SMP:00025 NCBI chr11:47,565,599...47,573,461
Ensembl chr11:47,565,430...47,573,461 		JBrowse link
G SELENOI selenoprotein I IEA KEGG hsa:00564 NCBI chr 2:26,346,143...26,395,885
Ensembl chr 2:26,308,547...26,395,885 		JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase IEA KEGG hsa:00564 NCBI chr  X:154,411,539...154,421,726
Ensembl chr  X:154,411,524...154,421,726 		JBrowse link
cardiolipin biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRLS1 cardiolipin synthase 1 TAS RGD PMID:24769127 RGD:10400850 NCBI chr20:6,005,938...6,040,053
Ensembl chr20:6,006,093...6,040,053 		JBrowse link
G PGS1 phosphatidylglycerophosphate synthase 1 TAS RGD PMID:24769127 RGD:10400850 NCBI chr17:78,378,649...78,424,659
Ensembl chr17:78,378,649...78,425,114 		JBrowse link
G PTPMT1 protein tyrosine phosphatase mitochondrial 1 TAS RGD PMID:24769127 RGD:10400850 NCBI chr11:47,565,599...47,573,461
Ensembl chr11:47,565,430...47,573,461 		JBrowse link
G TAMM41 TAM41 mitochondrial translocator assembly and maintenance homolog TAS RGD PMID:24769127 RGD:10400850 NCBI chr 3:11,721,896...11,846,885
Ensembl chr 3:11,790,442...11,846,919 		JBrowse link
cardiolipin metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CKMT1A creatine kinase, mitochondrial 1A TAS RGD PMID:24769127 RGD:10400850 NCBI chr15:43,692,786...43,699,222
Ensembl chr15:43,692,886...43,699,222
Ensembl chr15:43,692,886...43,699,222 		JBrowse link
G CKMT1B creatine kinase, mitochondrial 1B TAS RGD PMID:24769127 RGD:10400850 NCBI chr15:43,592,857...43,599,406
Ensembl chr15:43,593,054...43,604,901
Ensembl chr15:43,593,054...43,604,901 		JBrowse link
G CYCS cytochrome c, somatic TAS RGD PMID:24769127 RGD:10400850 NCBI chr 7:25,118,656...25,125,260
Ensembl chr 7:25,118,656...25,125,260 		JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 TAS RGD PMID:24769127 RGD:10400850 NCBI chr16:396,729...400,754
Ensembl chr16:396,725...410,367 		JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase TAS RGD PMID:24769127 RGD:10400850 NCBI chr  X:154,411,539...154,421,726
Ensembl chr  X:154,411,524...154,421,726 		JBrowse link
G TMEM256-PLSCR3 TMEM256-PLSCR3 readthrough (NMD candidate) TAS RGD PMID:24769127 RGD:10400850 NCBI chr17:7,389,727...7,404,131
Ensembl chr17:7,389,734...7,404,097 		JBrowse link
phosphoinositide metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMBRA1 autophagy and beclin 1 regulator 1 EXP SMPDB SMP:00463 NCBI chr11:46,396,412...46,594,023
Ensembl chr11:46,396,414...46,594,125 		JBrowse link
G BECN1 beclin 1 EXP SMPDB SMP:00463 NCBI chr17:42,810,132...42,824,282
Ensembl chr17:42,810,134...42,833,350 		JBrowse link
G CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase EXP SMPDB SMP:00463 NCBI chr16:29,858,357...29,863,226
Ensembl chr16:29,858,357...29,863,414 		JBrowse link
G EGFR epidermal growth factor receptor EXP SMPDB SMP:00463 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 EXP SMPDB SMP:00463 NCBI chr17:39,688,094...39,728,658
Ensembl chr17:39,687,914...39,730,426 		JBrowse link
G FIG4 FIG4 phosphoinositide 5-phosphatase EXP SMPDB SMP:00463 NCBI chr 6:109,691,296...109,825,426
Ensembl chr 6:109,690,609...109,878,098 		JBrowse link
G INPP4B inositol polyphosphate-4-phosphatase type II B EXP SMPDB SMP:00463 NCBI chr 4:142,023,160...142,846,535
Ensembl chr 4:142,023,160...142,847,432 		JBrowse link
G INPP5D inositol polyphosphate-5-phosphatase D EXP SMPDB SMP:00463 NCBI chr 2:233,060,342...233,207,903
Ensembl chr 2:233,059,967...233,207,903 		JBrowse link
G INPP5E inositol polyphosphate-5-phosphatase E EXP SMPDB SMP:00463 NCBI chr 9:136,428,619...136,439,845
Ensembl chr 9:136,428,619...136,439,845 		JBrowse link
G PI4KA phosphatidylinositol 4-kinase alpha EXP SMPDB SMP:00463 NCBI chr22:20,707,691...20,858,811
Ensembl chr22:20,707,691...20,859,417 		JBrowse link
G PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha EXP SMPDB SMP:00463 NCBI chr11:17,086,575...17,207,986
Ensembl chr11:17,077,730...17,207,986 		JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 EXP SMPDB SMP:00463 NCBI chr18:41,955,234...42,087,830
Ensembl chr18:41,955,234...42,087,830 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha EXP SMPDB SMP:00463 NCBI chr 3:179,148,126...179,240,093
Ensembl chr 3:179,148,114...179,240,093 		JBrowse link
G PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta EXP SMPDB SMP:00463 NCBI chr 1:9,627,258...9,729,114
Ensembl chr 1:9,629,889...9,729,114 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 EXP SMPDB SMP:00463 NCBI chr 5:68,215,756...68,301,821
Ensembl chr 5:68,215,740...68,301,821 		JBrowse link
G PIK3R4 phosphoinositide-3-kinase regulatory subunit 4 EXP SMPDB SMP:00463 NCBI chr 3:130,678,934...130,746,829
Ensembl chr 3:130,678,934...130,746,829 		JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing EXP SMPDB SMP:00463 NCBI chr 2:208,266,056...208,358,746
Ensembl chr 2:208,266,255...208,358,746 		JBrowse link
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha EXP SMPDB SMP:00463 NCBI chr10:22,534,854...22,714,578
Ensembl chr10:22,534,854...22,714,578 		JBrowse link
G PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha EXP SMPDB SMP:00463 NCBI chr 1:151,195,419...151,249,531
Ensembl chr 1:151,197,949...151,249,536 		JBrowse link
G PLCB1 phospholipase C beta 1 EXP SMPDB SMP:00463 NCBI chr20:8,132,266...8,884,900
Ensembl chr20:8,077,251...8,968,360 		JBrowse link
G PTEN phosphatase and tensin homolog EXP SMPDB SMP:00463 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,862,638...87,971,930 		JBrowse link
G SYNJ1 synaptojanin 1 EXP SMPDB SMP:00463 NCBI chr21:32,628,759...32,728,394
Ensembl chr21:32,628,759...32,728,040 		JBrowse link
G VAC14 VAC14 component of PIKFYVE complex EXP SMPDB SMP:00463 NCBI chr16:70,687,439...70,801,158
Ensembl chr16:70,687,439...70,801,160 		JBrowse link
plasmalogen biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1 EXP SMPDB SMP:00479 NCBI chr 6:32,168,212...32,178,108
Ensembl chr 6:32,168,212...32,178,096 		JBrowse link
G AGPS alkylglycerone phosphate synthase EXP SMPDB SMP:00479 NCBI chr 2:177,392,773...177,543,834
Ensembl chr 2:177,392,746...177,567,024 		JBrowse link
G CEPT1 choline/ethanolamine phosphotransferase 1 EXP SMPDB SMP:00479 NCBI chr 1:111,139,499...111,185,104
Ensembl chr 1:111,139,479...111,185,104 		JBrowse link
G GNPAT glyceronephosphate O-acyltransferase EXP SMPDB SMP:00479 NCBI chr 1:231,241,212...231,277,973
Ensembl chr 1:231,241,207...231,277,973 		JBrowse link
G PLPP1 phospholipid phosphatase 1 EXP SMPDB SMP:00479 NCBI chr 5:55,424,854...55,534,964
Ensembl chr 5:55,424,854...55,534,969 		JBrowse link
plasmalogen metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1 EXP SMPDB SMP:00479 NCBI chr 6:32,168,212...32,178,108
Ensembl chr 6:32,168,212...32,178,096 		JBrowse link
G AGPS alkylglycerone phosphate synthase EXP SMPDB SMP:00479 NCBI chr 2:177,392,773...177,543,834
Ensembl chr 2:177,392,746...177,567,024 		JBrowse link
G CEPT1 choline/ethanolamine phosphotransferase 1 EXP SMPDB SMP:00479 NCBI chr 1:111,139,499...111,185,104
Ensembl chr 1:111,139,479...111,185,104 		JBrowse link
G GNPAT glyceronephosphate O-acyltransferase EXP SMPDB SMP:00479 NCBI chr 1:231,241,212...231,277,973
Ensembl chr 1:231,241,207...231,277,973 		JBrowse link
G PLPP1 phospholipid phosphatase 1 EXP SMPDB SMP:00479 NCBI chr 5:55,424,854...55,534,964
Ensembl chr 5:55,424,854...55,534,969 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 5957
    classic metabolic pathway 1803
      lipid metabolic pathway 431
        glycerophospholipid metabolic pathway 112
          altered glycerophospholipid metabolic pathway + 0
          glycerophospholipid degradation pathway 0
          phosphatidylcholine metabolic pathway + 0
          phosphatidylglycerol metabolic pathway + 10
          phosphatidylinositol metabolic pathway + 23
          phosphatidylserine metabolic pathway 0
          plasmalogen metabolic pathway + 5
paths to the root