CYCS (cytochrome c, somatic) - Rat Genome Database

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Gene: CYCS (cytochrome c, somatic) Homo sapiens
Analyze
Symbol: CYCS
Name: cytochrome c, somatic
RGD ID: 1604618
HGNC Page HGNC
Description: Predicted to enable heme binding activity. Predicted to be involved in mitochondrial electron transport, cytochrome c to oxygen; mitochondrial electron transport, ubiquinol to cytochrome c; and positive regulation of cysteine-type endopeptidase activity involved in apoptotic process. Predicted to act upstream of or within several processes, including activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c; hydrogen peroxide metabolic process; and regulation of protein binding activity. Located in cytosol; mitochondrial intermembrane space; and nucleus. Implicated in cholangiocarcinoma; lung non-small cell carcinoma; pancreatic cancer; and thrombocytopenia. Biomarker of Huntington's disease; lung non-small cell carcinoma; and lung squamous cell carcinoma.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: CYC; cytochrome c; HCS; THC4
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: CYCSP1   CYCSP10   CYCSP11   CYCSP12   CYCSP17   CYCSP19   CYCSP2   CYCSP20   CYCSP22   CYCSP24   CYCSP25   CYCSP26   CYCSP27   CYCSP28   CYCSP29   CYCSP32   CYCSP33   CYCSP34   CYCSP35   CYCSP38   CYCSP39   CYCSP4   CYCSP40   CYCSP41   CYCSP42   CYCSP43   CYCSP44   CYCSP45   CYCSP48   CYCSP49   CYCSP5   CYCSP51   CYCSP53   CYCSP55   CYCSP6   CYCSP7   CYCSP8  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl725,118,656 - 25,125,260 (-)EnsemblGRCh38hg38GRCh38
GRCh38725,118,656 - 25,125,260 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37725,158,275 - 25,164,879 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36725,124,800 - 25,131,480 (-)NCBINCBI36hg18NCBI36
Celera725,146,921 - 25,154,374 (-)NCBI
Cytogenetic Map7p15.3NCBI
HuRef725,044,828 - 25,051,539 (-)NCBIHuRef
CHM1_1725,160,181 - 25,166,894 (-)NCBICHM1_1
CRA_TCAGchr7v2725,209,510 - 25,216,457 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (EXP)
(+)-dexrazoxane  (ISO)
(+)-taxifolin  (ISO)
(-)-citrinin  (ISO)
(-)-epigallocatechin 3-gallate  (EXP)
(-)-selegiline  (ISO)
(R)-adrenaline  (ISO)
(R)-lipoic acid  (ISO)
(R)-noradrenaline  (ISO)
(S)-naringenin  (EXP,ISO)
(S)-nicotine  (EXP,ISO)
(Z)-3-butylidenephthalide  (EXP)
(Z)-ligustilide  (EXP)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1,3-dichloropropan-2-ol  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4,6-trinitrobenzenesulfonic acid  (ISO)
2,4-dinitrotoluene  (ISO)
2,6-di-tert-butyl-4-methylphenol  (ISO)
2,6-dinitrotoluene  (ISO)
2-(4-iodo-2,5-dimethoxyphenyl)-1-methylethylamine  (ISO)
2-amino-2-deoxy-D-galactopyranose  (ISO)
2-amino-2-deoxy-D-glucopyranose  (EXP)
2-pyridylethylamine  (EXP)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3,3',5-triiodo-L-thyronine  (EXP)
3,3'-diindolylmethane  (EXP)
3-chloropropane-1,2-diol  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methyladenine  (EXP)
3-phenylprop-2-enal  (EXP)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxynon-2-enal  (ISO)
4-phenylbutyric acid  (EXP)
4-tert-Octylphenol  (ISO)
5-aza-2'-deoxycytidine  (EXP)
5-fluorouracil  (EXP)
5-Hydroxycapric acid  (ISO)
5-methyl-4-oxido-2-pyrazin-4-iumcarboxylic acid  (EXP)
6-formylpterin  (EXP)
6-propyl-2-thiouracil  (ISO)
7H-xanthine  (ISO)
8-Br-cAMP  (EXP)
9-cis,11-trans-octadecadienoic acid  (ISO)
9H-xanthine  (ISO)
acrolein  (EXP)
acrylamide  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucosamine  (EXP)
aldehydo-D-glucose  (EXP,ISO)
all-trans-retinoic acid  (EXP,ISO)
all-trans-retinol  (ISO)
alloxan  (ISO)
Allyl chloride  (ISO)
Aloe emodin  (EXP)
alpha-mangostin  (EXP)
alpinumisoflavone  (EXP)
alvocidib  (EXP)
amiloride  (EXP)
ammonium chloride  (ISO)
anastrozole  (EXP)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP,ISO)
antimycin A  (ISO)
apigenin  (EXP,ISO)
arachidonic acid  (EXP)
aristolochic acid  (EXP)
arjunolic acid  (ISO)
arsane  (EXP)
arsenic atom  (EXP)
arsenite(3-)  (EXP)
arsenous acid  (EXP,ISO)
Aspidin  (EXP)
atorvastatin calcium  (ISO)
atrazine  (EXP,ISO)
azadirachtin A  (EXP)
azoxystrobin  (EXP)
baicalein  (ISO)
BAPTA  (ISO)
bathocuproine disulfonic acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
berberine  (EXP)
beta-D-glucosamine  (EXP)
bexarotene  (EXP)
bifenthrin  (ISO)
bis(2-chloroethyl) sulfide  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bleomycin A2  (ISO)
bortezomib  (EXP)
bromobenzene  (ISO)
bufalin  (EXP)
buserelin  (EXP)
Butylparaben  (EXP)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
cafestol  (EXP)
caffeine  (EXP)
cajanol  (EXP)
calcidiol  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
camptothecin  (EXP)
carbamazepine  (EXP)
CARBENOXOLONE  (EXP)
carbon nanotube  (ISO)
carboplatin  (ISO)
carvedilol  (ISO)
casticin  (EXP)
chlorpyrifos  (EXP)
chromium(6+)  (ISO)
chrysazin  (EXP)
cisplatin  (EXP,ISO)
Clivoline  (EXP)
clobetasol  (ISO)
clofibrate  (ISO)
cobalt dichloride  (EXP)
cocaine  (ISO)
codeinone  (EXP)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) chloride  (ISO)
coumarin  (EXP)
crocidolite asbestos  (ISO)
crocin-1  (ISO)
Cuprizon  (ISO)
curcumin  (EXP)
cycloheximide  (EXP)
cyclosporin A  (EXP,ISO)
cypermethrin  (ISO)
D-glucose  (EXP,ISO)
dapagliflozin  (ISO)
daunorubicin  (EXP)
DDE  (ISO)
Deguelin  (EXP)
dehydroascorbic acid  (EXP)
deoxynivalenol  (EXP,ISO)
dexamethasone  (EXP,ISO)
diallyl trisulfide  (EXP)
diarsenic trioxide  (EXP,ISO)
diazinon  (EXP,ISO)
diazoxide  (ISO)
dibutyl phthalate  (ISO)
dichlorvos  (ISO)
diclofenac  (EXP)
dicoumarol  (ISO)
dicrotophos  (EXP)
dieldrin  (ISO)
diethyldithiocarbamic acid  (EXP)
diethylstilbestrol  (EXP,ISO)
digitoxin  (EXP)
dioscin  (EXP)
dioxygen  (EXP,ISO)
dorsomorphin  (EXP,ISO)
doxorubicin  (EXP,ISO)
Echinocystic acid  (EXP)
edaravone  (ISO)
elemental selenium  (EXP)
enalapril  (ISO)
endrin  (ISO)
entinostat  (EXP)
equol  (EXP)
erdosteine  (ISO)
esculetin  (EXP)
ethanol  (ISO)
ethylbenzene  (ISO)
etoposide  (EXP)
eugenol  (ISO)
fenofibrate  (EXP)
fipronil  (EXP)
flavanone  (EXP)
flavonoids  (EXP)
folic acid  (ISO)
folpet  (ISO)
formaldehyde  (EXP)
fraxetin  (EXP)
fructose  (EXP,ISO)
fulvestrant  (EXP,ISO)
fumonisin B1  (EXP)
gallic acid  (EXP)
gamma-hexachlorocyclohexane  (ISO)
Garcinol  (EXP)
gefitinib  (EXP)
genistein  (EXP)
gentamycin  (ISO)
Gentiopicrin  (ISO)
ginsenoside Rd  (ISO)
glabridin  (ISO)
glucose  (EXP,ISO)
glutathione  (EXP)
glycochenodeoxycholic acid  (ISO)
glyphosate  (EXP,ISO)
gold atom  (EXP)
gold(0)  (EXP)
Grifolin  (EXP)
heptachlor  (ISO)
hesperetin  (EXP)
hexadecanoic acid  (EXP)
hydrogen peroxide  (EXP,ISO)
hydroquinone  (EXP)
hyperforin  (EXP,ISO)
indole-3-methanol  (EXP)
indometacin  (EXP)
Ioversol  (ISO)
isatin  (EXP)
isoprenaline  (ISO)
ivermectin  (EXP)
kaempferol  (EXP)
kainic acid  (ISO)
ketoconazole  (ISO)
KN-93  (ISO)
L-ascorbic acid  (EXP)
L-dehydroascorbic acid  (EXP)
letrozole  (EXP)
leuprolide  (EXP,ISO)
limonene  (ISO)
linoleic acid  (EXP)
linsidomine  (ISO)
lipoic acid  (ISO)
lipopolysaccharide  (EXP,ISO)
Longikaurin A  (EXP)
losartan  (ISO)
LY294002  (EXP)
magnesium oxide  (EXP)
mancozeb  (EXP)
manganese atom  (EXP,ISO)
manganese(0)  (EXP,ISO)
manganese(II) chloride  (EXP,ISO)
methadone  (EXP)
methamphetamine  (ISO)
methotrexate  (EXP)
methoxychlor  (ISO)
methylisothiazolinone  (EXP)
metiram  (EXP)
miconazole  (ISO)
mifepristone  (EXP)
minocycline  (ISO)
mitomycin C  (EXP)
mono(2-ethylhexyl) phthalate  (ISO)
monocrotophos  (ISO)
morin  (ISO)
morphine  (EXP,ISO)
mycophenolic acid  (EXP)
myricetin  (EXP)
N-acetyl-L-cysteine  (EXP,ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
N-nitrosodiethylamine  (ISO)
naphthalene  (ISO)
naringin  (EXP)
nelfinavir  (ISO)
neocuproine  (ISO)
nickel subsulfide  (ISO)
nickel sulfate  (ISO)
niclosamide  (EXP)
nicotine  (EXP,ISO)
nimodipine  (ISO)
nitric oxide  (EXP,ISO)
Norethindrone enanthate  (ISO)
nortriptyline  (ISO)
ochratoxin A  (EXP,ISO)
oleanolic acid  (EXP)
oleic acid  (EXP)
oxidopamine  (ISO)
p-tert-Amylphenol  (ISO)
paclitaxel  (EXP)
paracetamol  (EXP,ISO)
paraquat  (EXP)
PD 168393  (EXP)
Pentoxifylline  (EXP)
perifosine  (EXP)
phenethyl caffeate  (ISO)
phenethyl isothiocyanate  (EXP)
phorbol 13-acetate 12-myristate  (EXP)
phosphoramide mustard  (ISO)
piperine  (EXP)
pirinixic acid  (ISO)
potassium dichromate  (ISO)
potassium iodide  (ISO)
pravastatin  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
probucol  (ISO)
procyanidin B2  (EXP)
progesterone  (ISO)
propetamphos  (ISO)
propofol  (ISO)
protoporphyrin  (ISO)
pterostilbene  (EXP)
pyrogallol  (EXP,ISO)
pyrrolidine dithiocarbamate  (EXP,ISO)
quercetin  (EXP,ISO)
quercetin 3-O-beta-D-galactopyranoside  (EXP)
resveratrol  (EXP,ISO)
rocaglamide  (EXP)
rotenone  (ISO)
S-adenosyl-L-methioninate  (ISO)
S-adenosyl-L-methionine  (ISO)
safrole  (EXP)
salubrinal  (EXP)
Salvianolic acid A  (ISO)
salvianolic acid B  (EXP)
saxagliptin  (ISO)
SB 203580  (EXP,ISO)
SB 431542  (EXP)
selenium atom  (EXP)
sevoflurane  (ISO)
silicon dioxide  (EXP)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (EXP,ISO)
sodium dichromate  (ISO)
sodium fluoride  (ISO)
Soman  (ISO)
sorafenib  (EXP)
streptozocin  (ISO)
sulforaphane  (ISO)
sulfur dioxide  (ISO)
surfactin  (EXP)
surfactin C  (EXP)
T-2 toxin  (EXP)
tamoxifen  (EXP,ISO)
taurine  (ISO)
tebufenpyrad  (EXP)
telmisartan  (ISO)
temozolomide  (EXP)
TEMPO  (ISO)
tert-butyl hydroperoxide  (EXP)
tetrachloromethane  (ISO)
thalidomide  (EXP)
thapsigargin  (EXP)
thymoquinone  (EXP)
tigecycline  (ISO)
tipifarnib  (EXP)
titanium dioxide  (EXP,ISO)
torcetrapib  (EXP)
tributylstannane  (ISO)
Tributyltin oxide  (EXP,ISO)
trichostatin A  (EXP)
triclosan  (EXP)
trimethylenediamine  (EXP)
trimethyltin  (ISO)
troglitazone  (EXP)
tungsten  (ISO)
tunicamycin  (EXP)
ursolic acid  (EXP)
valinomycin  (ISO)
valproic acid  (EXP)
vitamin E  (EXP,ISO)
vorinostat  (EXP)
wortmannin  (ISO)
xestospongin C  (ISO)
xylitol  (EXP)
zearalenone  (EXP,ISO)
zinc pyrithione  (EXP)
ziram  (EXP)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

Additional References at PubMed
PMID:199233   PMID:1309738   PMID:2153405   PMID:2580882   PMID:2844747   PMID:2849112   PMID:4403130   PMID:6087732   PMID:6088481   PMID:6251869   PMID:6262312   PMID:6270113  
PMID:8206937   PMID:8663341   PMID:8689682   PMID:9027314   PMID:9192670   PMID:9267021   PMID:9390557   PMID:9515723   PMID:9615439   PMID:9760250   PMID:9847074   PMID:9922454  
PMID:10082581   PMID:10206961   PMID:10506125   PMID:10622714   PMID:10625700   PMID:10683230   PMID:10801801   PMID:10818086   PMID:10980706   PMID:11076863   PMID:11193032   PMID:11230166  
PMID:11256614   PMID:11462036   PMID:11737208   PMID:11739707   PMID:11784858   PMID:11790791   PMID:11839755   PMID:12019321   PMID:12101247   PMID:12107093   PMID:12147322   PMID:12243190  
PMID:12404116   PMID:12416732   PMID:12477932   PMID:12555167   PMID:12690205   PMID:12853948   PMID:12909341   PMID:13933734   PMID:14063298   PMID:14702039   PMID:15033690   PMID:15254227  
PMID:15489334   PMID:15489336   PMID:15691386   PMID:15698476   PMID:16381901   PMID:16520893   PMID:16713569   PMID:16934433   PMID:16979168   PMID:17353931   PMID:17409234   PMID:18417609  
PMID:18825408   PMID:18973553   PMID:18976975   PMID:19029908   PMID:19393246   PMID:19404857   PMID:19458171   PMID:19640329   PMID:19770576   PMID:19812265   PMID:19851871   PMID:19875445  
PMID:19895853   PMID:20227384   PMID:20237496   PMID:20671748   PMID:20833797   PMID:20877624   PMID:21192676   PMID:21319273   PMID:21448217   PMID:21630459   PMID:21706253   PMID:21712378  
PMID:21751259   PMID:21869827   PMID:21873635   PMID:22102269   PMID:22157762   PMID:22184220   PMID:22192356   PMID:22216281   PMID:22320973   PMID:22363611   PMID:22552851   PMID:22623428  
PMID:22632162   PMID:22939629   PMID:23070294   PMID:23150584   PMID:23207240   PMID:23334161   PMID:23364796   PMID:23443079   PMID:23535033   PMID:24099549   PMID:24163370   PMID:24329121  
PMID:24488929   PMID:24556695   PMID:24739951   PMID:24886575   PMID:24981860   PMID:25028650   PMID:25028717   PMID:25241761   PMID:25275009   PMID:25281560   PMID:25416956   PMID:25595453  
PMID:25910212   PMID:26216969   PMID:26344197   PMID:26760575   PMID:26972000   PMID:27173435   PMID:27461282   PMID:27499296   PMID:28317242   PMID:28378594   PMID:28514442   PMID:28598148  
PMID:28617588   PMID:28700943   PMID:28888620   PMID:29083920   PMID:29180619   PMID:29257225   PMID:29507755   PMID:29568061   PMID:29599191   PMID:29949346   PMID:29955894   PMID:30021884  
PMID:30051457   PMID:30515402   PMID:30632703   PMID:30948266   PMID:31046837   PMID:31150218   PMID:31536960   PMID:31617661   PMID:31678591   PMID:31723608   PMID:31760234   PMID:31980649  
PMID:32203420   PMID:32244917   PMID:32296183   PMID:32513696   PMID:32717223   PMID:32807901   PMID:32814053   PMID:32848065   PMID:32877691   PMID:32929329   PMID:33480393   PMID:33680287  
PMID:34079125  


Genomics

Comparative Map Data
CYCS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl725,118,656 - 25,125,260 (-)EnsemblGRCh38hg38GRCh38
GRCh38725,118,656 - 25,125,260 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37725,158,275 - 25,164,879 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36725,124,800 - 25,131,480 (-)NCBINCBI36hg18NCBI36
Celera725,146,921 - 25,154,374 (-)NCBI
Cytogenetic Map7p15.3NCBI
HuRef725,044,828 - 25,051,539 (-)NCBIHuRef
CHM1_1725,160,181 - 25,166,894 (-)NCBICHM1_1
CRA_TCAGchr7v2725,209,510 - 25,216,457 (-)NCBI
Cycs
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39650,539,543 - 50,543,549 (-)NCBIGRCm39mm39
GRCm39 Ensembl650,539,543 - 50,543,518 (-)Ensembl
GRCm38650,562,563 - 50,566,569 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl650,562,563 - 50,566,538 (-)EnsemblGRCm38mm10GRCm38
MGSCv37650,512,562 - 50,516,473 (-)NCBIGRCm37mm9NCBIm37
MGSCv36650,492,149 - 50,496,060 (-)NCBImm8
Celera651,079,647 - 51,083,558 (-)NCBICelera
Cytogenetic Map6B2.3NCBI
cM Map624.32NCBI
Cycs
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2479,651,894 - 79,653,994 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl479,651,378 - 79,654,054 (-)Ensembl
Rnor_6.0480,331,226 - 80,333,326 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl480,331,227 - 80,333,326 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04145,002,156 - 145,004,256 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4478,825,878 - 78,827,978 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1479,102,008 - 79,104,108 (-)NCBI
Celera474,558,589 - 74,560,689 (-)NCBICelera
Cytogenetic Map4q24NCBI
LOC102023786
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541027,086,405 - 27,089,255 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541027,086,405 - 27,089,255 (-)NCBIChiLan1.0ChiLan1.0
LOC100986481
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1725,396,013 - 25,398,549 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl725,396,013 - 25,398,549 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0725,784,900 - 25,791,598 (-)NCBIMhudiblu_PPA_v0panPan3
CYCS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11438,579,446 - 38,581,983 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1438,579,446 - 38,581,983 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1438,129,129 - 38,131,665 (-)NCBI
ROS_Cfam_1.01438,516,027 - 38,518,562 (-)NCBI
UMICH_Zoey_3.11438,628,462 - 38,630,996 (-)NCBI
UNSW_CanFamBas_1.01438,321,370 - 38,323,910 (-)NCBI
UU_Cfam_GSD_1.01438,663,988 - 38,666,523 (-)NCBI
CYCS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1847,169,866 - 47,173,866 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11847,169,921 - 47,172,212 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21852,036,068 - 52,038,366 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103226354
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12133,251,825 - 33,253,298 (+)NCBI
Vero_WHO_p1.0NW_02366604271,404,460 - 71,406,988 (-)NCBI
LOC101718508
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247395,411,192 - 5,413,995 (+)NCBI

Position Markers
RH78202  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37725,164,777 - 25,164,919UniSTSGRCh37
Build 36725,131,302 - 25,131,444RGDNCBI36
Celera725,154,171 - 25,154,313RGD
Cytogenetic Map7p15.3UniSTS
HuRef725,051,336 - 25,051,478UniSTS
CRA_TCAGchr7v2725,216,254 - 25,216,396UniSTS
GeneMap99-GB4 RH Map7111.15UniSTS
D1S3438  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37725,162,548 - 25,162,897UniSTSGRCh37
GRCh371157,098,881 - 157,099,242UniSTSGRCh37
Build 361155,365,505 - 155,365,866RGDNCBI36
Celera725,151,200 - 25,151,549UniSTS
Celera1130,170,072 - 130,170,433RGD
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map1q21-q23UniSTS
HuRef725,049,107 - 25,049,456UniSTS
CRA_TCAGchr7v2725,213,789 - 25,214,138UniSTS
GeneMap99-G3 RH Map7886.0UniSTS
GDB:314949  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map5q21UniSTS
Cytogenetic Map7p15-p14UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map19q13.13UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map8q24.3UniSTS
GDB:434012  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map19q13.13UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map2q31.2-q33.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map5q21UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map17q25.2UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map1p21.3-p13.1UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map6p22.3-p22.1UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map12p13.1UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map1q24-q25.3UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map1pter-q31.3UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map16p13UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map10p11.1UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map2q11.2-q12UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map1p36-p35UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map4q13UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic MapXq21.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map6p12.3-p11.2UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map4p16UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map6pter-p12.1UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map14q31UniSTS
RH79802  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map2q31.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map19q13.2UniSTS
L17709  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map19q13.13UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p36.12UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map4p15.31UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map3q27UniSTS
GDB:631813  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map11p12UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map5q11.2-q13.1UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map15q24.2UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map3p21.33UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map2p23.1UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map19qUniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map19p13.3UniSTS
SHGC-60475  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7p15.3UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2590
Count of miRNA genes:774
Interacting mature miRNAs:887
Transcripts:ENST00000305786, ENST00000409409, ENST00000409764, ENST00000413447
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 3
Medium 2437 2501 1715 615 1505 456 4345 2151 3691 416 1454 1612 175 1 1199 2785 6 2
Low 2 490 11 9 446 9 12 46 43 3 3 1 5 3
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_023438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_018947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC004129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC007487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI365318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK056360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK311836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL713681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC014359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC014361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC015130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC067222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC068464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC071761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF446772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG677560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT006946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU597562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH236948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR542175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D00265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB447825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF919224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M22877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000305786   ⟹   ENSP00000307786
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl725,118,656 - 25,125,260 (-)Ensembl
RefSeq Acc Id: ENST00000409409   ⟹   ENSP00000386270
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl725,123,307 - 25,125,249 (-)Ensembl
RefSeq Acc Id: ENST00000409764   ⟹   ENSP00000387279
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl725,123,444 - 25,125,260 (-)Ensembl
RefSeq Acc Id: ENST00000413447   ⟹   ENSP00000416479
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl725,123,716 - 25,125,260 (-)Ensembl
RefSeq Acc Id: NM_018947   ⟹   NP_061820
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38725,118,656 - 25,125,260 (-)NCBI
GRCh37725,158,270 - 25,164,980 (-)ENTREZGENE
Build 36725,124,800 - 25,131,480 (-)NCBI Archive
HuRef725,044,828 - 25,051,539 (-)ENTREZGENE
CHM1_1725,160,181 - 25,166,894 (-)NCBI
CRA_TCAGchr7v2725,209,510 - 25,216,457 (-)ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_061820 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA35732 (Get FASTA)   NCBI Sequence Viewer  
  AAH05299 (Get FASTA)   NCBI Sequence Viewer  
  AAH08475 (Get FASTA)   NCBI Sequence Viewer  
  AAH08477 (Get FASTA)   NCBI Sequence Viewer  
  AAH09578 (Get FASTA)   NCBI Sequence Viewer  
  AAH09579 (Get FASTA)   NCBI Sequence Viewer  
  AAH09582 (Get FASTA)   NCBI Sequence Viewer  
  AAH09587 (Get FASTA)   NCBI Sequence Viewer  
  AAH09602 (Get FASTA)   NCBI Sequence Viewer  
  AAH09607 (Get FASTA)   NCBI Sequence Viewer  
  AAH14359 (Get FASTA)   NCBI Sequence Viewer  
  AAH14361 (Get FASTA)   NCBI Sequence Viewer  
  AAH15130 (Get FASTA)   NCBI Sequence Viewer  
  AAH16006 (Get FASTA)   NCBI Sequence Viewer  
  AAH21994 (Get FASTA)   NCBI Sequence Viewer  
  AAH22330 (Get FASTA)   NCBI Sequence Viewer  
  AAH67222 (Get FASTA)   NCBI Sequence Viewer  
  AAH68464 (Get FASTA)   NCBI Sequence Viewer  
  AAH70156 (Get FASTA)   NCBI Sequence Viewer  
  AAH70346 (Get FASTA)   NCBI Sequence Viewer  
  AAH71761 (Get FASTA)   NCBI Sequence Viewer  
  AAP35592 (Get FASTA)   NCBI Sequence Viewer  
  AAQ96844 (Get FASTA)   NCBI Sequence Viewer  
  AEP27189 (Get FASTA)   NCBI Sequence Viewer  
  BAA00187 (Get FASTA)   NCBI Sequence Viewer  
  BAG34778 (Get FASTA)   NCBI Sequence Viewer  
  CAD28485 (Get FASTA)   NCBI Sequence Viewer  
  CAG46972 (Get FASTA)   NCBI Sequence Viewer  
  EAL24239 (Get FASTA)   NCBI Sequence Viewer  
  EAW93822 (Get FASTA)   NCBI Sequence Viewer  
  EAW93823 (Get FASTA)   NCBI Sequence Viewer  
  EAW93824 (Get FASTA)   NCBI Sequence Viewer  
  P99999 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_061820   ⟸   NM_018947
- UniProtKB: P99999 (UniProtKB/Swiss-Prot),   G4XXL9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000416479   ⟸   ENST00000413447
RefSeq Acc Id: ENSP00000387279   ⟸   ENST00000409764
RefSeq Acc Id: ENSP00000386270   ⟸   ENST00000409409
RefSeq Acc Id: ENSP00000307786   ⟸   ENST00000305786
Protein Domains
Cytochrome c

Promoters
RGD ID:7210129
Promoter ID:EPDNEW_H10810
Type:initiation region
Name:CYCS_1
Description:cytochrome c, somatic
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38725,125,260 - 25,125,320EPDNEW
RGD ID:6805422
Promoter ID:HG_KWN:56616
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000409409,   ENST00000409764,   OTTHUMT00000250299,   OTTHUMT00000326936
Position:
Human AssemblyChrPosition (strand)Source
Build 36725,131,356 - 25,131,882 (-)MPROMDB

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_018947.5(CYCS):c.124G>A (p.Gly42Ser) single nucleotide variant Thrombocytopenia 4 [RCV000018419]|Thrombocytopenia [RCV000851585] Chr7:25123996 [GRCh38]
Chr7:25163615 [GRCh37]
Chr7:7p15.3
pathogenic|likely pathogenic
GRCh38/hg38 7p22.3-14.1(chr7:54185-41875885)x3 copy number gain See cases [RCV000051159] Chr7:54185..41875885 [GRCh38]
Chr7:54185..41915483 [GRCh37]
Chr7:149268..41882008 [NCBI36]
Chr7:7p22.3-14.1
pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:53985-159282531)x1 copy number loss See cases [RCV000052250] Chr7:53985..159282531 [GRCh38]
Chr7:53985..159075220 [GRCh37]
Chr7:149068..158767981 [NCBI36]
Chr7:7p22.3-q36.3
pathogenic
GRCh38/hg38 7p22.3-14.2(chr7:54185-37089712)x3 copy number gain See cases [RCV000053530] Chr7:54185..37089712 [GRCh38]
Chr7:54185..37129317 [GRCh37]
Chr7:149268..37095842 [NCBI36]
Chr7:7p22.3-14.2
pathogenic
GRCh38/hg38 7p21.2-15.2(chr7:16234212-26167278)x3 copy number gain See cases [RCV000053531] Chr7:16234212..26167278 [GRCh38]
Chr7:16273837..26206898 [GRCh37]
Chr7:16240362..26173423 [NCBI36]
Chr7:7p21.2-15.2
pathogenic
GRCh38/hg38 7p21.1-15.2(chr7:20210912-27849400)x1 copy number loss See cases [RCV000134333] Chr7:20210912..27849400 [GRCh38]
Chr7:20250535..27889019 [GRCh37]
Chr7:20217060..27855544 [NCBI36]
Chr7:7p21.1-15.2
pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:54185-159282390)x1 copy number loss See cases [RCV000135401] Chr7:54185..159282390 [GRCh38]
Chr7:54185..159075079 [GRCh37]
Chr7:149268..158767840 [NCBI36]
Chr7:7p22.3-q36.3
pathogenic
GRCh38/hg38 7p22.3-15.2(chr7:54185-26827634)x3 copy number gain See cases [RCV000136557] Chr7:54185..26827634 [GRCh38]
Chr7:54185..26867253 [GRCh37]
Chr7:149268..26833778 [NCBI36]
Chr7:7p22.3-15.2
pathogenic
GRCh38/hg38 7p21.1-14.3(chr7:20561456-32005143)x1 copy number loss See cases [RCV000136775] Chr7:20561456..32005143 [GRCh38]
Chr7:20601079..32044755 [GRCh37]
Chr7:20567604..32011280 [NCBI36]
Chr7:7p21.1-14.3
pathogenic
GRCh38/hg38 7p22.1-15.2(chr7:5682209-27230311)x3 copy number gain See cases [RCV000136649] Chr7:5682209..27230311 [GRCh38]
Chr7:5721840..27269930 [GRCh37]
Chr7:5688366..27236455 [NCBI36]
Chr7:7p22.1-15.2
pathogenic
GRCh38/hg38 7p22.3-15.3(chr7:45130-25221165)x3 copy number gain See cases [RCV000137824] Chr7:45130..25221165 [GRCh38]
Chr7:45130..25260784 [GRCh37]
Chr7:140213..25227309 [NCBI36]
Chr7:7p22.3-15.3
pathogenic
GRCh38/hg38 7p15.3-15.2(chr7:23765383-26136158)x1 copy number loss See cases [RCV000138258] Chr7:23765383..26136158 [GRCh38]
Chr7:23805002..26175778 [GRCh37]
Chr7:23771527..26142303 [NCBI36]
Chr7:7p15.3-15.2
likely pathogenic|uncertain significance
GRCh38/hg38 7p22.3-15.2(chr7:1698124-27207295)x3 copy number gain See cases [RCV000143060] Chr7:1698124..27207295 [GRCh38]
Chr7:1737760..27246914 [GRCh37]
Chr7:1704286..27213439 [NCBI36]
Chr7:7p22.3-15.2
pathogenic
GRCh38/hg38 7p21.3-15.2(chr7:10610069-25760560)x1 copy number loss See cases [RCV000142708] Chr7:10610069..25760560 [GRCh38]
Chr7:10649696..25800180 [GRCh37]
Chr7:10616221..25766705 [NCBI36]
Chr7:7p21.3-15.2
pathogenic
GRCh38/hg38 7p22.3-15.2(chr7:43360-27196404)x3 copy number gain See cases [RCV000143586] Chr7:43360..27196404 [GRCh38]
Chr7:43360..27236023 [GRCh37]
Chr7:138443..27202548 [NCBI36]
Chr7:7p22.3-15.2
pathogenic
NM_018947.5(CYCS):c.145T>C (p.Tyr49His) single nucleotide variant Thrombocytopenia 4 [RCV000157619] Chr7:25123975 [GRCh38]
Chr7:25163594 [GRCh37]
Chr7:7p15.3
pathogenic
GRCh37/hg19 7p15.3-14.3(chr7:22935369-32621975)x1 copy number loss See cases [RCV000240125] Chr7:22935369..32621975 [GRCh37]
Chr7:7p15.3-14.3
pathogenic
NM_018947.5(CYCS):c.*3282del deletion Thrombocytopenia [RCV000285309] Chr7:25120419 [GRCh38]
Chr7:25160038 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*4723_*4725del deletion Thrombocytopenia [RCV000279455] Chr7:25118976..25118978 [GRCh38]
Chr7:25158595..25158597 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*2186G>A single nucleotide variant Thrombocytopenia [RCV000282475] Chr7:25121515 [GRCh38]
Chr7:25161134 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.-6T>G single nucleotide variant Thrombocytopenia 4 [RCV000999969]|not specified [RCV000246652] Chr7:25124125 [GRCh38]
Chr7:25163744 [GRCh37]
Chr7:7p15.3
benign|likely benign
NM_018947.5(CYCS):c.*2776C>G single nucleotide variant Thrombocytopenia [RCV000277764] Chr7:25120925 [GRCh38]
Chr7:25160544 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*2801T>C single nucleotide variant Thrombocytopenia [RCV000299086] Chr7:25120900 [GRCh38]
Chr7:25160519 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*1279A>T single nucleotide variant Thrombocytopenia [RCV000332529] Chr7:25122422 [GRCh38]
Chr7:25162041 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2222C>T single nucleotide variant Thrombocytopenia [RCV000283457] Chr7:25121479 [GRCh38]
Chr7:25161098 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*4850G>C single nucleotide variant Thrombocytopenia [RCV000321082] Chr7:25118851 [GRCh38]
Chr7:25158470 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*3330G>T single nucleotide variant Thrombocytopenia [RCV000343820] Chr7:25120371 [GRCh38]
Chr7:25159990 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*248T>A single nucleotide variant Thrombocytopenia [RCV000343898] Chr7:25123453 [GRCh38]
Chr7:25163072 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*4408A>C single nucleotide variant Thrombocytopenia [RCV000395478] Chr7:25119293 [GRCh38]
Chr7:25158912 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.147C>T (p.Tyr49=) single nucleotide variant Thrombocytopenia [RCV000395161] Chr7:25123973 [GRCh38]
Chr7:25163592 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*3613T>C single nucleotide variant Thrombocytopenia [RCV000333790] Chr7:25120088 [GRCh38]
Chr7:25159707 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*2139A>T single nucleotide variant Thrombocytopenia [RCV000334554] Chr7:25121562 [GRCh38]
Chr7:25161181 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*2951A>G single nucleotide variant Thrombocytopenia [RCV000302823] Chr7:25120750 [GRCh38]
Chr7:25160369 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*4038G>C single nucleotide variant Thrombocytopenia [RCV000303218] Chr7:25119663 [GRCh38]
Chr7:25159282 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2799T>G single nucleotide variant Thrombocytopenia [RCV000370212] Chr7:25120902 [GRCh38]
Chr7:25160521 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*1864C>G single nucleotide variant Thrombocytopenia [RCV000398357] Chr7:25121837 [GRCh38]
Chr7:25161456 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*4109T>A single nucleotide variant Thrombocytopenia [RCV000398487] Chr7:25119592 [GRCh38]
Chr7:25159211 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*1758C>T single nucleotide variant Thrombocytopenia [RCV000401794] Chr7:25121943 [GRCh38]
Chr7:25161562 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*2332T>C single nucleotide variant Thrombocytopenia [RCV000270417] Chr7:25121369 [GRCh38]
Chr7:25160988 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.-128A>G single nucleotide variant Thrombocytopenia [RCV000400143] Chr7:25125319 [GRCh38]
Chr7:25164938 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*1622del deletion Thrombocytopenia [RCV000358070] Chr7:25122079 [GRCh38]
Chr7:25161698 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2290G>A single nucleotide variant Thrombocytopenia [RCV000380166] Chr7:25121411 [GRCh38]
Chr7:25161030 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*4516C>T single nucleotide variant Thrombocytopenia [RCV000349542] Chr7:25119185 [GRCh38]
Chr7:25158804 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*537C>T single nucleotide variant Thrombocytopenia [RCV000350170] Chr7:25123164 [GRCh38]
Chr7:25162783 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2187C>T single nucleotide variant Thrombocytopenia [RCV000374541] Chr7:25121514 [GRCh38]
Chr7:25161133 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*1310G>C single nucleotide variant Thrombocytopenia [RCV000375341] Chr7:25122391 [GRCh38]
Chr7:25162010 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*1718T>C single nucleotide variant Thrombocytopenia [RCV000306671] Chr7:25121983 [GRCh38]
Chr7:25161602 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*4158A>T single nucleotide variant Thrombocytopenia [RCV000306774] Chr7:25119543 [GRCh38]
Chr7:25159162 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2455A>G single nucleotide variant Thrombocytopenia [RCV000329455] Chr7:25121246 [GRCh38]
Chr7:25160865 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*1880C>T single nucleotide variant Thrombocytopenia [RCV000351924] Chr7:25121821 [GRCh38]
Chr7:25161440 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.-80T>C single nucleotide variant Thrombocytopenia [RCV000361089] Chr7:25125271 [GRCh38]
Chr7:25164890 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*3495G>T single nucleotide variant Thrombocytopenia [RCV000330396] Chr7:25120206 [GRCh38]
Chr7:25159825 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*3615G>A single nucleotide variant Thrombocytopenia [RCV000354743] Chr7:25120086 [GRCh38]
Chr7:25159705 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*3576T>C single nucleotide variant Thrombocytopenia [RCV000275268] Chr7:25120125 [GRCh38]
Chr7:25159744 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*4012G>A single nucleotide variant Thrombocytopenia [RCV000357991] Chr7:25119689 [GRCh38]
Chr7:25159308 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*4524del deletion Thrombocytopenia [RCV000294582] Chr7:25119177 [GRCh38]
Chr7:25158796 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*3495G>A single nucleotide variant Thrombocytopenia [RCV000384957] Chr7:25120206 [GRCh38]
Chr7:25159825 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*5013T>C single nucleotide variant Thrombocytopenia [RCV000360562] Chr7:25118688 [GRCh38]
Chr7:25158307 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*4136A>G single nucleotide variant Thrombocytopenia [RCV000361488] Chr7:25119565 [GRCh38]
Chr7:25159184 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*3972C>T single nucleotide variant Thrombocytopenia [RCV000263220] Chr7:25119729 [GRCh38]
Chr7:25159348 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*1294A>G single nucleotide variant Thrombocytopenia [RCV000279832] Chr7:25122407 [GRCh38]
Chr7:25162026 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*3610del deletion Thrombocytopenia [RCV000388375] Chr7:25120091 [GRCh38]
Chr7:25159710 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*1783G>A single nucleotide variant Thrombocytopenia [RCV000364530] Chr7:25121918 [GRCh38]
Chr7:25161537 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*1109G>A single nucleotide variant Thrombocytopenia [RCV000389470] Chr7:25122592 [GRCh38]
Chr7:25162211 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*4208G>C single nucleotide variant Thrombocytopenia [RCV000390123] Chr7:25119493 [GRCh38]
Chr7:25159112 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*401A>G single nucleotide variant Thrombocytopenia [RCV000395167] Chr7:25123300 [GRCh38]
Chr7:25162919 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*5004_*5005del deletion Thrombocytopenia [RCV000265943] Chr7:25118696..25118697 [GRCh38]
Chr7:25158315..25158316 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*1343A>G single nucleotide variant Thrombocytopenia [RCV000318352] Chr7:25122358 [GRCh38]
Chr7:25161977 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*3826C>T single nucleotide variant Thrombocytopenia [RCV000299861] Chr7:25119875 [GRCh38]
Chr7:25159494 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*3142C>A single nucleotide variant Thrombocytopenia [RCV000342488] Chr7:25120559 [GRCh38]
Chr7:25160178 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*1678dup duplication Thrombocytopenia [RCV000266625] Chr7:25122022..25122023 [GRCh38]
Chr7:25161641..25161642 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*3614A>G single nucleotide variant Thrombocytopenia [RCV000259900] Chr7:25120087 [GRCh38]
Chr7:25159706 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2502T>C single nucleotide variant Thrombocytopenia [RCV000272024] Chr7:25121199 [GRCh38]
Chr7:25160818 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*1676_*1678dup duplication Thrombocytopenia [RCV000324078] Chr7:25122022..25122023 [GRCh38]
Chr7:25161641..25161642 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*1702_*1705dup duplication Thrombocytopenia [RCV000363755] Chr7:25121995..25121996 [GRCh38]
Chr7:25161614..25161615 [GRCh37]
Chr7:7p15.3
likely benign
NM_018947.5(CYCS):c.*1427A>C single nucleotide variant Thrombocytopenia [RCV000265680] Chr7:25122274 [GRCh38]
Chr7:25161893 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.6(CYCS):c.155C>T (p.Ala52Val) single nucleotide variant Abnormal bleeding [RCV001270600] Chr7:25123965 [GRCh38]
Chr7:25163584 [GRCh37]
Chr7:7p15.3
likely pathogenic
NM_018947.5(CYCS):c.*4358G>C single nucleotide variant Thrombocytopenia [RCV000291048] Chr7:25119343 [GRCh38]
Chr7:25158962 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*3379C>T single nucleotide variant Thrombocytopenia [RCV000291209] Chr7:25120322 [GRCh38]
Chr7:25159941 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*385G>C single nucleotide variant Thrombocytopenia [RCV000291305] Chr7:25123316 [GRCh38]
Chr7:25162935 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.-148G>A single nucleotide variant Thrombocytopenia [RCV000302777] Chr7:25125339 [GRCh38]
Chr7:25164958 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2435G>A single nucleotide variant Thrombocytopenia [RCV000381333] Chr7:25121266 [GRCh38]
Chr7:25160885 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2804C>T single nucleotide variant Thrombocytopenia [RCV000400049] Chr7:25120897 [GRCh38]
Chr7:25160516 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*4686C>G single nucleotide variant Thrombocytopenia [RCV000315789] Chr7:25119015 [GRCh38]
Chr7:25158634 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*4209A>T single nucleotide variant Thrombocytopenia [RCV000346383] Chr7:25119492 [GRCh38]
Chr7:25159111 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*3319C>T single nucleotide variant Thrombocytopenia [RCV000382046] Chr7:25120382 [GRCh38]
Chr7:25160001 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*950A>G single nucleotide variant Thrombocytopenia [RCV000292869] Chr7:25122751 [GRCh38]
Chr7:25162370 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2838C>G single nucleotide variant Thrombocytopenia [RCV000336690] Chr7:25120863 [GRCh38]
Chr7:25160482 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2563_*2564del deletion Thrombocytopenia [RCV000369026] Chr7:25121137..25121138 [GRCh38]
Chr7:25160756..25160757 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*4642G>A single nucleotide variant Thrombocytopenia [RCV000388939] Chr7:25119059 [GRCh38]
Chr7:25158678 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2297C>G single nucleotide variant Thrombocytopenia [RCV000323249] Chr7:25121404 [GRCh38]
Chr7:25161023 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*4818C>T single nucleotide variant Thrombocytopenia [RCV000374024] Chr7:25118883 [GRCh38]
Chr7:25158502 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2216C>G single nucleotide variant Thrombocytopenia [RCV000340829] Chr7:25121485 [GRCh38]
Chr7:25161104 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*3024A>T single nucleotide variant Thrombocytopenia [RCV000394037] Chr7:25120677 [GRCh38]
Chr7:25160296 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2763T>C single nucleotide variant Thrombocytopenia [RCV000312039] Chr7:25120938 [GRCh38]
Chr7:25160557 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*1839C>T single nucleotide variant Thrombocytopenia [RCV000312064] Chr7:25121862 [GRCh38]
Chr7:25161481 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2025G>A single nucleotide variant Thrombocytopenia [RCV000313401] Chr7:25121676 [GRCh38]
Chr7:25161295 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.*2123A>T single nucleotide variant Thrombocytopenia [RCV000397341] Chr7:25121578 [GRCh38]
Chr7:25161197 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.6(CYCS):c.79C>T (p.His27Tyr) single nucleotide variant Thrombocytopenia 4 [RCV001580209] Chr7:25124041 [GRCh38]
Chr7:25163660 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.5(CYCS):c.301_303del (p.Lys101del) deletion Thrombocytopenia 4 [RCV000736012] Chr7:25123716..25123718 [GRCh38]
Chr7:25163335..25163337 [GRCh37]
Chr7:7p15.3
pathogenic
TMEM106B-BRAF fusion deletion Pleomorphic xanthoastrocytoma [RCV000454357] Chr7:12258147..140494267 [GRCh37]
Chr7:7p21.3-q34
pathogenic
GRCh37/hg19 7p21.3-14.2(chr7:11562624-36395416)x3 copy number gain See cases [RCV000446478] Chr7:11562624..36395416 [GRCh37]
Chr7:7p21.3-14.2
pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43360-159119707)x1 copy number loss See cases [RCV000446044] Chr7:43360..159119707 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
GRCh37/hg19 7p21.3-12.1(chr7:11048840-52863626)x3 copy number gain See cases [RCV000512091] Chr7:11048840..52863626 [GRCh37]
Chr7:7p21.3-12.1
pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707) copy number gain See cases [RCV000510686] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
GRCh37/hg19 7p22.3-14.3(chr7:704573-29257946)x3 copy number gain See cases [RCV000510275] Chr7:704573..29257946 [GRCh37]
Chr7:7p22.3-14.3
pathogenic
GRCh37/hg19 7p15.3-14.3(chr7:24344104-28879357)x1 copy number loss See cases [RCV000510695] Chr7:24344104..28879357 [GRCh37]
Chr7:7p15.3-14.3
pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707)x3 copy number gain See cases [RCV000511549] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
NM_018947.6(CYCS):c.295C>G (p.Leu99Val) single nucleotide variant Thrombocytopenia [RCV001003904] Chr7:25123724 [GRCh38]
Chr7:25163343 [GRCh37]
Chr7:7p15.3
likely pathogenic
NC_000007.13:g.(20954043_21001537)_(114528369_114556605)inv inversion Speech-language disorder 1 [RCV000234948] Chr7:21001537..114528369 [GRCh37]
Chr7:7p15.3-q31.1
pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:44935-159126310)x3 copy number gain not provided [RCV000746280] Chr7:44935..159126310 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:10704-159122532)x3 copy number gain not provided [RCV000746278] Chr7:10704..159122532 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:10365-159119707)x3 copy number gain not provided [RCV000848126] Chr7:10365..159119707 [GRCh37]
Chr7:7p22.3-q36.3
pathogenic
GRCh37/hg19 7p15.3-14.3(chr7:23877135-33139446)x1 copy number loss not provided [RCV001005924] Chr7:23877135..33139446 [GRCh37]
Chr7:7p15.3-14.3
pathogenic
NM_018947.6(CYCS):c.154G>A (p.Ala52Thr) single nucleotide variant not provided [RCV000998778] Chr7:25123966 [GRCh38]
Chr7:25163585 [GRCh37]
Chr7:7p15.3
uncertain significance
NC_000007.13:g.23236782_30690453del7453672 deletion Silver Russell Syndrome-related disorder [RCV000785664] Chr7:23236782..30690453 [GRCh37]
Chr7:7p15.3-14.3
pathogenic
NM_018947.5(CYCS):c.308C>T (p.Thr103Ile) single nucleotide variant Thrombocytopenia [RCV000852107] Chr7:25123711 [GRCh38]
Chr7:25163330 [GRCh37]
Chr7:7p15.3
uncertain significance
NM_018947.6(CYCS):c.170-3T>C single nucleotide variant Thrombocytopenia 4 [RCV001334033] Chr7:25123852 [GRCh38]
Chr7:25163471 [GRCh37]
Chr7:7p15.3
uncertain significance

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:19986 AgrOrtholog
COSMIC CYCS COSMIC
Ensembl Genes ENSG00000172115 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000307786 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000386270 UniProtKB/Swiss-Prot
  ENSP00000387279 UniProtKB/Swiss-Prot
  ENSP00000416479 UniProtKB/TrEMBL
Ensembl Transcript ENST00000305786 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000409409 UniProtKB/Swiss-Prot
  ENST00000409764 UniProtKB/Swiss-Prot
  ENST00000413447 UniProtKB/TrEMBL
Gene3D-CATH 1.10.760.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000172115 GTEx
HGNC ID HGNC:19986 ENTREZGENE
Human Proteome Map CYCS Human Proteome Map
InterPro Cyt_c-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_c-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_c_1A/1B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:54205 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 54205 ENTREZGENE
OMIM 123970 OMIM
  612004 OMIM
PANTHER PTHR11961 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Cytochrom_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134981636 PharmGKB
PRINTS CYTCHRMECIAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE CYTC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF46626 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt C9JFR7_HUMAN UniProtKB/TrEMBL
  CYC_HUMAN UniProtKB/Swiss-Prot
  G4XXL9 ENTREZGENE, UniProtKB/TrEMBL
  P99999 ENTREZGENE
UniProt Secondary A4D166 UniProtKB/Swiss-Prot
  B2R4I1 UniProtKB/Swiss-Prot
  P00001 UniProtKB/Swiss-Prot
  Q6NUR2 UniProtKB/Swiss-Prot
  Q6NX69 UniProtKB/Swiss-Prot
  Q96BV4 UniProtKB/Swiss-Prot