GPAT4 (glycerol-3-phosphate acyltransferase 4) - Rat Genome Database

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Gene: GPAT4 (glycerol-3-phosphate acyltransferase 4) Homo sapiens
Analyze
Symbol: GPAT4
Name: glycerol-3-phosphate acyltransferase 4
RGD ID: 1606717
HGNC Page HGNC:20880
Description: Enables glycerol-3-phosphate O-acyltransferase activity. Involved in acyl-CoA metabolic process and phosphatidylcholine biosynthetic process. Located in endoplasmic reticulum and membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1-acyl-sn-glycerol-3-phosphate acyltransferase zeta; 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta); 1-AGP acyltransferase 6; 1-AGPAT 6; acyl-CoA:glycerol-3-phosphate acyltransferase 4; AGPAT6; DKFZp586M1819; glycerol-3-phosphate acyltransferase 6; glycerol-3-phosphate acyltransferase-4; LPAAT-zeta; LPAATZ; lysophosphatidic acid acyltransferase zeta; testis spermatogenesis apoptosis-related protein 7; TSARG7
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: LOC401767  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38841,578,200 - 41,625,001 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl841,577,187 - 41,625,001 (+)EnsemblGRCh38hg38GRCh38
GRCh37841,435,719 - 41,482,520 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36841,554,876 - 41,597,971 (+)NCBINCBI36Build 36hg18NCBI36
Celera840,384,627 - 40,431,440 (+)NCBICelera
Cytogenetic Map8p11.21NCBI
HuRef839,963,590 - 40,010,405 (+)NCBIHuRef
CHM1_1841,484,058 - 41,530,844 (+)NCBICHM1_1
T2T-CHM13v2.0841,851,958 - 41,898,752 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
endoplasmic reticulum  (IDA,IEA,ISS)
endoplasmic reticulum membrane  (IEA,TAS)
membrane  (HDA,IDA,IEA,NAS)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8944226   PMID:12477932   PMID:12938015   PMID:12975309   PMID:15489334   PMID:16625827   PMID:16713569   PMID:18238778   PMID:19946888   PMID:20181984   PMID:21988832   PMID:22658674  
PMID:22810586   PMID:24156295   PMID:25918168   PMID:26186194   PMID:26638075   PMID:28378594   PMID:28380382   PMID:28514442   PMID:28692057   PMID:29117863   PMID:29180619   PMID:29395067  
PMID:29568061   PMID:30352685   PMID:30846317   PMID:31056421   PMID:31091453   PMID:31177093   PMID:31227594   PMID:31871319   PMID:32707033   PMID:32788342   PMID:32807901   PMID:32877691  
PMID:33060197   PMID:33845483   PMID:33957083   PMID:33961781   PMID:34079125   PMID:34432599   PMID:34597346   PMID:35271311   PMID:35696571   PMID:35748872   PMID:36215168   PMID:37689310  
PMID:37774976   PMID:37827155   PMID:37931956  


Genomics

Comparative Map Data
GPAT4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38841,578,200 - 41,625,001 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl841,577,187 - 41,625,001 (+)EnsemblGRCh38hg38GRCh38
GRCh37841,435,719 - 41,482,520 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36841,554,876 - 41,597,971 (+)NCBINCBI36Build 36hg18NCBI36
Celera840,384,627 - 40,431,440 (+)NCBICelera
Cytogenetic Map8p11.21NCBI
HuRef839,963,590 - 40,010,405 (+)NCBIHuRef
CHM1_1841,484,058 - 41,530,844 (+)NCBICHM1_1
T2T-CHM13v2.0841,851,958 - 41,898,752 (+)NCBIT2T-CHM13v2.0
Gpat4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39823,661,281 - 23,698,469 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl823,661,281 - 23,698,362 (-)EnsemblGRCm39 Ensembl
GRCm38823,171,265 - 23,208,453 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl823,171,265 - 23,208,346 (-)EnsemblGRCm38mm10GRCm38
MGSCv37824,283,418 - 24,318,925 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36824,638,491 - 24,673,891 (-)NCBIMGSCv36mm8
Celera824,669,180 - 24,705,196 (-)NCBICelera
Cytogenetic Map8A2NCBI
cM Map811.42NCBI
Gpat4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81675,515,935 - 75,555,431 (+)NCBIGRCr8
mRatBN7.21668,819,031 - 68,852,903 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1668,819,079 - 68,852,901 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1674,096,775 - 74,130,504 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01677,524,724 - 77,558,249 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01672,773,906 - 72,807,431 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01673,615,949 - 73,649,769 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1673,615,949 - 73,649,767 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01673,249,352 - 73,282,223 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41673,276,423 - 73,310,177 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11673,276,687 - 73,309,892 (+)NCBI
Celera1666,711,037 - 66,744,848 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
Gpat4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555361,265,409 - 1,313,326 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555361,266,920 - 1,313,765 (-)NCBIChiLan1.0ChiLan1.0
GPAT4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2760,027,946 - 60,074,579 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1835,748,018 - 35,794,924 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0840,822,736 - 40,869,744 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1838,271,519 - 38,318,587 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl838,271,808 - 38,318,587 (+)Ensemblpanpan1.1panPan2
GPAT4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11623,990,142 - 24,022,822 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1623,911,972 - 24,010,152 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.01625,735,622 - 25,770,954 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1625,735,417 - 25,770,950 (-)EnsemblROS_Cfam_1.0 Ensembl
Gpat4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494347,011,476 - 47,051,182 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936785966,295 - 1,007,747 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936785967,871 - 1,007,761 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPAT4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1710,691,751 - 10,725,024 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11710,705,998 - 10,724,486 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21712,138,395 - 12,156,886 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GPAT4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1839,557,262 - 39,598,544 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl839,557,275 - 39,601,567 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660522,219,405 - 2,260,481 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gpat4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247801,643,030 - 1,691,496 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247801,643,030 - 1,691,517 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GPAT4
13 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 8p23.1-11.21(chr8:12609975-42085703)x3 copy number gain See cases [RCV000050294] Chr8:12609975..42085703 [GRCh38]
Chr8:12467484..41943221 [GRCh37]
Chr8:12511855..42062378 [NCBI36]
Chr8:8p23.1-11.21		 pathogenic
GRCh38/hg38 8p21.2-q11.21(chr8:25832130-48521849)x3 copy number gain See cases [RCV000050904] Chr8:25832130..48521849 [GRCh38]
Chr8:25689646..49434409 [GRCh37]
Chr8:25745563..49596962 [NCBI36]
Chr8:8p21.2-q11.21		 pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12728904-43673207)x3 copy number gain See cases [RCV000050912] Chr8:12728904..43673207 [GRCh38]
Chr8:12586413..43528350 [GRCh37]
Chr8:12630784..43647507 [NCBI36]
Chr8:8p23.1-11.1		 pathogenic
GRCh38/hg38 8p12-11.21(chr8:34312250-43158901)x1 copy number loss See cases [RCV000050745] Chr8:34312250..43158901 [GRCh38]
Chr8:34169768..43014044 [GRCh37]
Chr8:34289310..43133201 [NCBI36]
Chr8:8p12-11.21		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145049449)x3 copy number gain See cases [RCV000051206] Chr8:241530..145049449 [GRCh38]
Chr8:191530..146274835 [GRCh37]
Chr8:181530..146245639 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12728904-41928741)x3 copy number gain See cases [RCV000051110] Chr8:12728904..41928741 [GRCh38]
Chr8:12586413..41786259 [GRCh37]
Chr8:12630784..41905416 [NCBI36]
Chr8:8p23.1-11.21		 pathogenic
GRCh38/hg38 8p12-q11.21(chr8:29719897-48521849)x3 copy number gain See cases [RCV000050995] Chr8:29719897..48521849 [GRCh38]
Chr8:29577413..49434409 [GRCh37]
Chr8:29633332..49596962 [NCBI36]
Chr8:8p12-q11.21		 pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43336172)x3 copy number gain See cases [RCV000053630] Chr8:12609975..43336172 [GRCh38]
Chr8:12467484..43191315 [GRCh37]
Chr8:12511855..43310472 [NCBI36]
Chr8:8p23.1-11.1		 pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43255410)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053631]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053631]|See cases [RCV000053631] Chr8:12609975..43255410 [GRCh38]
Chr8:12467484..43110553 [GRCh37]
Chr8:12511855..43229710 [NCBI36]
Chr8:8p23.1-11.1		 pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12750796-43532444)x3 copy number gain See cases [RCV000053632] Chr8:12750796..43532444 [GRCh38]
Chr8:12608305..43387587 [GRCh37]
Chr8:12652676..43506744 [NCBI36]
Chr8:8p23.1-11.1		 pathogenic
GRCh38/hg38 8p22-q11.21(chr8:14940110-47929925)x3 copy number gain See cases [RCV000053635] Chr8:14940110..47929925 [GRCh38]
Chr8:14797619..48842485 [GRCh37]
Chr8:14841990..49005038 [NCBI36]
Chr8:8p22-q11.21		 pathogenic
GRCh38/hg38 8p11.23-11.21(chr8:37899430-42371734)x3 copy number gain See cases [RCV000053648] Chr8:37899430..42371734 [GRCh38]
Chr8:37756948..42229252 [GRCh37]
Chr8:37876106..42348409 [NCBI36]
Chr8:8p11.23-11.21		 pathogenic
GRCh38/hg38 8p11.22-q11.21(chr8:39830633-49209461)x3 copy number gain See cases [RCV000053649] Chr8:39830633..49209461 [GRCh38]
Chr8:39688152..50122020 [GRCh37]
Chr8:39807309..50284573 [NCBI36]
Chr8:8p11.22-q11.21		 pathogenic
GRCh38/hg38 8p11.21-11.1(chr8:39981424-43532444)x3 copy number gain See cases [RCV000053650] Chr8:39981424..43532444 [GRCh38]
Chr8:39838943..43387587 [GRCh37]
Chr8:39958100..43506744 [NCBI36]
Chr8:8p11.21-11.1		 pathogenic
GRCh38/hg38 8p11.21-q11.21(chr8:41547961-48178799)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053651]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053651]|See cases [RCV000053651] Chr8:41547961..48178799 [GRCh38]
Chr8:41405480..49091359 [GRCh37]
Chr8:41524637..49253912 [NCBI36]
Chr8:8p11.21-q11.21		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000053602] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:244417-145054775)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|See cases [RCV000053604] Chr8:244417..145054775 [GRCh38]
Chr8:194417..146280161 [GRCh37]
Chr8:184417..146250965 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
NM_178819.3(AGPAT6):c.460C>T (p.Gln154Ter) single nucleotide variant Malignant melanoma [RCV000068312] Chr8:41609879 [GRCh38]
Chr8:41467398 [GRCh37]
Chr8:41586555 [NCBI36]
Chr8:8p11.21		 not provided
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43673207)x3 copy number gain See cases [RCV000135786] Chr8:12609975..43673207 [GRCh38]
Chr8:12467484..43528350 [GRCh37]
Chr8:12511855..43647507 [NCBI36]
Chr8:8p23.1-11.1		 pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12383584-43673207)x3 copy number gain See cases [RCV000135566] Chr8:12383584..43673207 [GRCh38]
Chr8:12241093..43528350 [GRCh37]
Chr8:12285464..43647507 [NCBI36]
Chr8:8p23.1-11.1		 pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12182421-43673207)x3 copy number gain See cases [RCV000137249] Chr8:12182421..43673207 [GRCh38]
Chr8:12039930..43528350 [GRCh37]
Chr8:12077339..43647507 [NCBI36]
Chr8:8p23.1-11.1		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241605-145054781)x3 copy number gain See cases [RCV000138643] Chr8:241605..145054781 [GRCh38]
Chr8:191605..146280167 [GRCh37]
Chr8:181605..146250971 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p12-q12.1(chr8:36580103-59618998)x3 copy number gain See cases [RCV000139582] Chr8:36580103..59618998 [GRCh38]
Chr8:36437621..60531557 [GRCh37]
Chr8:36556779..60694111 [NCBI36]
Chr8:8p12-q12.1		 pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12646123-43686843)x3 copy number gain See cases [RCV000139796] Chr8:12646123..43686843 [GRCh38]
Chr8:12503632..43541986 [GRCh37]
Chr8:12548003..43661143 [NCBI36]
Chr8:8p23.1-11.1		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:208048-145070385)x3 copy number gain See cases [RCV000141808] Chr8:208048..145070385 [GRCh38]
Chr8:158048..146295771 [GRCh37]
Chr8:148048..146266575 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p21.3-q24.3(chr8:21291522-145070385)x3 copy number gain See cases [RCV000142021] Chr8:21291522..145070385 [GRCh38]
Chr8:21149033..146295771 [GRCh37]
Chr8:21193313..146266575 [NCBI36]
Chr8:8p21.3-q24.3		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:226452-145068712)x3 copy number gain See cases [RCV000142858] Chr8:226452..145068712 [GRCh38]
Chr8:176452..146294098 [GRCh37]
Chr8:166452..146264902 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p11.21-11.1(chr8:39960531-43673207)x3 copy number gain See cases [RCV000142663] Chr8:39960531..43673207 [GRCh38]
Chr8:39818050..43528350 [GRCh37]
Chr8:39937207..43647507 [NCBI36]
Chr8:8p11.21-11.1		 pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12728904-43673207)x3 copy number gain See cases [RCV000148237] Chr8:12728904..43673207 [GRCh38]
Chr8:12586413..43528350 [GRCh37]
Chr8:12630784..43647507 [NCBI36]
Chr8:8p23.1-11.1		 pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12609975-42085703)x3 copy number gain See cases [RCV000148249] Chr8:12609975..42085703 [GRCh38]
Chr8:12467484..41943221 [GRCh37]
Chr8:12511855..42062378 [NCBI36]
Chr8:8p23.1-11.21		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000148092] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p11.21-11.1(chr8:40690198-43388233)x3 copy number gain See cases [RCV000446823] Chr8:40690198..43388233 [GRCh37]
Chr8:8p11.21-11.1		 pathogenic
GRCh37/hg19 8p21.2-q12.1(chr8:24772064-24813176)x3 copy number gain See cases [RCV000446588] Chr8:24772064..24813176 [GRCh37]
Chr8:8p21.2-q12.1		 uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158991-146280828)x3 copy number gain See cases [RCV000447507] Chr8:158991..146280828 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p23.3-11.1(chr8:158048-43786723)x3 copy number gain See cases [RCV000447909] Chr8:158048..43786723 [GRCh37]
Chr8:8p23.3-11.1		 pathogenic
GRCh37/hg19 8p23.1-11.1(chr8:12580132-43388233)x3 copy number gain See cases [RCV000447913] Chr8:12580132..43388233 [GRCh37]
Chr8:8p23.1-11.1		 pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771) copy number gain See cases [RCV000510234] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p23.1-11.1(chr8:11935023-43824035)x3 copy number gain See cases [RCV000511028] Chr8:11935023..43824035 [GRCh37]
Chr8:8p23.1-11.1		 pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771)x3 copy number gain See cases [RCV000511095] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p23.1-q24.3(chr8:12490999-146295771)x3 copy number gain See cases [RCV000512169] Chr8:12490999..146295771 [GRCh37]
Chr8:8p23.1-q24.3		 pathogenic
GRCh37/hg19 8p12-11.21(chr8:31352498-41481295)x3 copy number gain not provided [RCV000683035] Chr8:31352498..41481295 [GRCh37]
Chr8:8p12-11.21		 pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:10213-146293414)x3 copy number gain not provided [RCV000747248] Chr8:10213..146293414 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:164984-146293414)x3 copy number gain not provided [RCV000747254] Chr8:164984..146293414 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
NM_178819.4(GPAT4):c.701+8C>T single nucleotide variant not provided [RCV000900021] Chr8:41612000 [GRCh38]
Chr8:41469519 [GRCh37]
Chr8:8p11.21		 benign
NM_178819.4(GPAT4):c.246A>G (p.Ala82=) single nucleotide variant not provided [RCV000964484] Chr8:41609665 [GRCh38]
Chr8:41467184 [GRCh37]
Chr8:8p11.21		 benign
GRCh37/hg19 8p12-q24.3(chr8:31936551-146295771)x3 copy number gain not provided [RCV000848192] Chr8:31936551..146295771 [GRCh37]
Chr8:8p12-q24.3		 pathogenic
GRCh37/hg19 8p11.22-q12.3(chr8:39555657-64049089)x3 copy number gain not provided [RCV000846266] Chr8:39555657..64049089 [GRCh37]
Chr8:8p11.22-q12.3		 pathogenic
GRCh37/hg19 8p11.21(chr8:41462954-41568924)x3 copy number gain not provided [RCV001006099] Chr8:41462954..41568924 [GRCh37]
Chr8:8p11.21		 uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3 copy number gain not provided [RCV000848478] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p12-11.1(chr8:36094421-43822214)x3 copy number gain not provided [RCV000848822] Chr8:36094421..43822214 [GRCh37]
Chr8:8p12-11.1		 uncertain significance
GRCh37/hg19 8p23.3-11.1(chr8:176814-43396776) copy number gain Abnormal fetal cardiovascular morphology [RCV001291977] Chr8:176814..43396776 [GRCh37]
Chr8:8p23.3-11.1		 pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771) copy number gain Polydactyly [RCV002280629] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
Single allele complex See cases [RCV002292428] Chr8:6999114..11935023 [GRCh37]
Chr8:8p23.3-11.21		 pathogenic
Single allele complex 8p inverted duplication/deletion syndrome [RCV002280753] Chr8:158048..43019304 [GRCh37]
Chr8:8p23.3-11.21		 pathogenic
GRCh37/hg19 8p11.21(chr8:41455579-41568924)x3 copy number gain not provided [RCV002474626] Chr8:41455579..41568924 [GRCh37]
Chr8:8p11.21		 uncertain significance
NM_178819.4(GPAT4):c.1172T>A (p.Met391Lys) single nucleotide variant Inborn genetic diseases [RCV002733862] Chr8:41618802 [GRCh38]
Chr8:41476321 [GRCh37]
Chr8:8p11.21		 uncertain significance
NM_178819.4(GPAT4):c.637G>A (p.Val213Ile) single nucleotide variant Inborn genetic diseases [RCV002689170] Chr8:41611928 [GRCh38]
Chr8:41469447 [GRCh37]
Chr8:8p11.21		 uncertain significance
NM_178819.4(GPAT4):c.207C>A (p.Asn69Lys) single nucleotide variant Inborn genetic diseases [RCV002738215] Chr8:41609457 [GRCh38]
Chr8:41466976 [GRCh37]
Chr8:8p11.21		 uncertain significance
NM_178819.4(GPAT4):c.1298C>T (p.Thr433Met) single nucleotide variant Inborn genetic diseases [RCV002670150] Chr8:41620928 [GRCh38]
Chr8:41478447 [GRCh37]
Chr8:8p11.21		 uncertain significance
NM_178819.4(GPAT4):c.188G>A (p.Arg63Gln) single nucleotide variant Inborn genetic diseases [RCV002934272] Chr8:41609438 [GRCh38]
Chr8:41466957 [GRCh37]
Chr8:8p11.21		 uncertain significance
NM_178819.4(GPAT4):c.182T>C (p.Met61Thr) single nucleotide variant Inborn genetic diseases [RCV003299121] Chr8:41609432 [GRCh38]
Chr8:41466951 [GRCh37]
Chr8:8p11.21		 uncertain significance
GRCh37/hg19 8p11.23-q11.21(chr8:36763176-50929707)x3 copy number gain See cases [RCV003329560] Chr8:36763176..50929707 [GRCh37]
Chr8:8p11.23-q11.21		 pathogenic
NM_178819.4(GPAT4):c.127C>G (p.Arg43Gly) single nucleotide variant Inborn genetic diseases [RCV003383833] Chr8:41599266 [GRCh38]
Chr8:41456785 [GRCh37]
Chr8:8p11.21		 uncertain significance
NM_178819.4(GPAT4):c.862G>A (p.Val288Ile) single nucleotide variant Inborn genetic diseases [RCV003347754] Chr8:41612911 [GRCh38]
Chr8:41470430 [GRCh37]
Chr8:8p11.21		 uncertain significance
GRCh37/hg19 8p23.2-11.21(chr8:2201405-41723095)x3 copy number gain not provided [RCV003484713] Chr8:2201405..41723095 [GRCh37]
Chr8:8p23.2-11.21		 pathogenic
GRCh37/hg19 8p22-11.1(chr8:14240573-43824035)x3 copy number gain not provided [RCV003484725] Chr8:14240573..43824035 [GRCh37]
Chr8:8p22-11.1		 pathogenic
GRCh37/hg19 8p11.22-11.21(chr8:38602986-41615655)x1 copy number loss not provided [RCV003435667] Chr8:38602986..41615655 [GRCh37]
Chr8:8p11.22-11.21		 pathogenic
Single allele duplication not provided [RCV003448693] Chr8:12530550..43483193 [GRCh37]
Chr8:8p23.1-11.1		 pathogenic
GRCh37/hg19 8p21.2-q21.3(chr8:27024288-89410121)x3 copy number gain not specified [RCV003986754] Chr8:27024288..89410121 [GRCh37]
Chr8:8p21.2-q21.3		 pathogenic
GRCh37/hg19 8p11.23-11.1(chr8:37988714-43780050)x3 copy number gain not specified [RCV003986759] Chr8:37988714..43780050 [GRCh37]
Chr8:8p11.23-11.1		 uncertain significance
GRCh37/hg19 8p11.23-11.1(chr8:37972810-43837099)x3 copy number gain not specified [RCV003986761] Chr8:37972810..43837099 [GRCh37]
Chr8:8p11.23-11.1		 uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3 copy number gain not specified [RCV003986742] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p23.3-11.21(chr8:158048-41600696)x3 copy number gain not specified [RCV003986756] Chr8:158048..41600696 [GRCh37]
Chr8:8p23.3-11.21		 pathogenic
GRCh37/hg19 8p21.3-11.1(chr8:20136266-43786723)x3 copy number gain not specified [RCV003986767] Chr8:20136266..43786723 [GRCh37]
Chr8:8p21.3-11.1		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4286
Count of miRNA genes:1291
Interacting mature miRNAs:1701
Transcripts:ENST00000396987, ENST00000518628, ENST00000519853, ENST00000519921, ENST00000520223, ENST00000520258, ENST00000521121, ENST00000521184, ENST00000521349, ENST00000521806, ENST00000523906
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
STS-H81989  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37841,479,200 - 41,479,405UniSTSGRCh37
Build 36841,598,357 - 41,598,562RGDNCBI36
Celera840,428,109 - 40,428,314RGD
Cytogenetic Map8p11.21UniSTS
HuRef840,007,076 - 40,007,281UniSTS
GeneMap99-GB4 RH Map8181.55UniSTS
RH93524  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37841,479,079 - 41,479,207UniSTSGRCh37
Build 36841,598,236 - 41,598,364RGDNCBI36
Celera840,427,988 - 40,428,116RGD
Cytogenetic Map8p11.21UniSTS
HuRef840,006,955 - 40,007,083UniSTS
GeneMap99-GB4 RH Map8174.1UniSTS
SHGC-81288  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37841,461,572 - 41,461,921UniSTSGRCh37
Build 36841,580,729 - 41,581,078RGDNCBI36
Celera840,410,490 - 40,410,839RGD
Cytogenetic Map8p11.21UniSTS
HuRef839,989,464 - 39,989,813UniSTS
TNG Radiation Hybrid Map822757.0UniSTS
RH122486  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37841,469,258 - 41,469,529UniSTSGRCh37
Build 36841,588,415 - 41,588,686RGDNCBI36
Celera840,418,167 - 40,418,438RGD
Cytogenetic Map8p11.21UniSTS
HuRef839,997,130 - 39,997,401UniSTS
TNG Radiation Hybrid Map822757.0UniSTS
A004O41  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37841,482,282 - 41,482,468UniSTSGRCh37
Build 36841,601,439 - 41,601,625RGDNCBI36
Celera840,431,202 - 40,431,388RGD
Cytogenetic Map8p11.21UniSTS
HuRef840,010,167 - 40,010,353UniSTS
GeneMap99-GB4 RH Map8174.1UniSTS
NCBI RH Map8583.2UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2391 2310 1650 549 1791 394 4306 1856 2754 379 1446 1598 168 1199 2741 6
Low 48 681 76 75 160 71 51 341 980 40 14 15 7 1 5 47 2
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001363197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047421374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054359765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001745474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC009630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF317516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF406612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL834255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY358670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY513610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU149203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU620295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB470455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB479618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GM839075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000396987   ⟹   ENSP00000380184
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl841,578,200 - 41,625,001 (+)Ensembl
RefSeq Acc Id: ENST00000518628
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl841,618,706 - 41,621,394 (+)Ensembl
RefSeq Acc Id: ENST00000519853   ⟹   ENSP00000429477
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl841,578,215 - 41,610,812 (+)Ensembl
RefSeq Acc Id: ENST00000519921
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl841,610,256 - 41,615,048 (+)Ensembl
RefSeq Acc Id: ENST00000520223   ⟹   ENSP00000428648
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl841,578,415 - 41,599,226 (+)Ensembl
RefSeq Acc Id: ENST00000520258
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl841,578,188 - 41,598,925 (+)Ensembl
RefSeq Acc Id: ENST00000521121
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl841,584,772 - 41,598,665 (+)Ensembl
RefSeq Acc Id: ENST00000521184
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl841,577,187 - 41,598,614 (+)Ensembl
RefSeq Acc Id: ENST00000521349
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl841,618,532 - 41,621,373 (+)Ensembl
RefSeq Acc Id: ENST00000521806   ⟹   ENSP00000428630
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl841,599,048 - 41,612,236 (+)Ensembl
RefSeq Acc Id: ENST00000523906
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl841,610,778 - 41,618,813 (+)Ensembl
RefSeq Acc Id: NM_001363197   ⟹   NP_001350126
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38841,578,516 - 41,625,001 (+)NCBI
T2T-CHM13v2.0841,852,274 - 41,898,752 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001363198   ⟹   NP_001350127
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38841,578,200 - 41,625,001 (+)NCBI
T2T-CHM13v2.0841,851,958 - 41,898,752 (+)NCBI
Sequence:
RefSeq Acc Id: NM_178819   ⟹   NP_848934
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38841,578,200 - 41,625,001 (+)NCBI
GRCh37841,435,702 - 41,482,520 (+)NCBI
Build 36841,554,876 - 41,597,971 (+)NCBI Archive
Celera840,384,627 - 40,431,440 (+)RGD
HuRef839,963,590 - 40,010,405 (+)RGD
CHM1_1841,484,058 - 41,530,844 (+)NCBI
T2T-CHM13v2.0841,851,958 - 41,898,752 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047421370   ⟹   XP_047277326
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38841,578,200 - 41,625,001 (+)NCBI
RefSeq Acc Id: XM_047421371   ⟹   XP_047277327
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38841,584,778 - 41,625,001 (+)NCBI
RefSeq Acc Id: XM_047421372   ⟹   XP_047277328
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38841,578,516 - 41,625,001 (+)NCBI
RefSeq Acc Id: XM_047421374   ⟹   XP_047277330
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38841,609,962 - 41,625,001 (+)NCBI
RefSeq Acc Id: XM_054359762   ⟹   XP_054215737
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0841,851,958 - 41,898,752 (+)NCBI
RefSeq Acc Id: XM_054359763   ⟹   XP_054215738
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0841,858,532 - 41,898,752 (+)NCBI
RefSeq Acc Id: XM_054359764   ⟹   XP_054215739
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0841,852,274 - 41,898,752 (+)NCBI
RefSeq Acc Id: XM_054359765   ⟹   XP_054215740
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0841,883,700 - 41,898,752 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_848934   ⟸   NM_178819
- Peptide Label: isoform 1 precursor
- UniProtKB: Q86V89 (UniProtKB/Swiss-Prot),   Q86UL3 (UniProtKB/Swiss-Prot),   Q2TU73 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001350127   ⟸   NM_001363198
- Peptide Label: isoform 2
- UniProtKB: Q8NDD3 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001350126   ⟸   NM_001363197
- Peptide Label: isoform 1 precursor
- UniProtKB: Q86UL3 (UniProtKB/Swiss-Prot),   Q2TU73 (UniProtKB/Swiss-Prot),   Q86V89 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSP00000429477   ⟸   ENST00000519853
RefSeq Acc Id: ENSP00000428648   ⟸   ENST00000520223
RefSeq Acc Id: ENSP00000428630   ⟸   ENST00000521806
RefSeq Acc Id: ENSP00000380184   ⟸   ENST00000396987
RefSeq Acc Id: XP_047277326   ⟸   XM_047421370
- Peptide Label: isoform X1
- UniProtKB: Q86UL3 (UniProtKB/Swiss-Prot),   Q2TU73 (UniProtKB/Swiss-Prot),   Q86V89 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277328   ⟸   XM_047421372
- Peptide Label: isoform X1
- UniProtKB: Q86UL3 (UniProtKB/Swiss-Prot),   Q2TU73 (UniProtKB/Swiss-Prot),   Q86V89 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277327   ⟸   XM_047421371
- Peptide Label: isoform X1
- UniProtKB: Q86UL3 (UniProtKB/Swiss-Prot),   Q2TU73 (UniProtKB/Swiss-Prot),   Q86V89 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047277330   ⟸   XM_047421374
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054215737   ⟸   XM_054359762
- Peptide Label: isoform X1
- UniProtKB: Q86UL3 (UniProtKB/Swiss-Prot),   Q2TU73 (UniProtKB/Swiss-Prot),   Q86V89 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215739   ⟸   XM_054359764
- Peptide Label: isoform X1
- UniProtKB: Q86UL3 (UniProtKB/Swiss-Prot),   Q2TU73 (UniProtKB/Swiss-Prot),   Q86V89 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215738   ⟸   XM_054359763
- Peptide Label: isoform X1
- UniProtKB: Q86UL3 (UniProtKB/Swiss-Prot),   Q2TU73 (UniProtKB/Swiss-Prot),   Q86V89 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054215740   ⟸   XM_054359765
- Peptide Label: isoform X2
Protein Domains
Phospholipid/glycerol acyltransferase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q86UL3-F1-model_v2 AlphaFold Q86UL3 1-456 view protein structure

Promoters
RGD ID:6806486
Promoter ID:HG_KWN:61188
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_178819
Position:
Human AssemblyChrPosition (strand)Source
Build 36841,554,451 - 41,555,257 (+)MPROMDB
RGD ID:7213185
Promoter ID:EPDNEW_H12338
Type:initiation region
Name:AGPAT6_1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38841,578,200 - 41,578,260EPDNEW
RGD ID:6813346
Promoter ID:HG_ACW:76827
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:AGPAT6.HAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 36841,591,841 - 41,592,341 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:20880 AgrOrtholog
COSMIC GPAT4 COSMIC
Ensembl Genes ENSG00000158669 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000396987 ENTREZGENE
  ENST00000396987.7 UniProtKB/Swiss-Prot
  ENST00000519853.5 UniProtKB/TrEMBL
  ENST00000520223.1 UniProtKB/TrEMBL
  ENST00000521806.5 UniProtKB/TrEMBL
GTEx ENSG00000158669 GTEx
HGNC ID HGNC:20880 ENTREZGENE
Human Proteome Map GPAT4 Human Proteome Map
InterPro LPCAT1-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Plipid/glycerol_acylTrfase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:137964 UniProtKB/Swiss-Prot
NCBI Gene 137964 ENTREZGENE
OMIM 608143 OMIM
PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PHOSPHOLIPID ACYLTRANSFERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Acyltransferase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA142672637 PharmGKB
SMART PlsC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Glycerol-3-phosphate (1)-acyltransferase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt E5RGW3_HUMAN UniProtKB/TrEMBL
  E5RHA6_HUMAN UniProtKB/TrEMBL
  E5RIA1_HUMAN UniProtKB/TrEMBL
  GPAT4_HUMAN UniProtKB/Swiss-Prot
  Q2TU73 ENTREZGENE
  Q86UL3 ENTREZGENE
  Q86V89 ENTREZGENE
  Q8NDD3 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q2TU73 UniProtKB/Swiss-Prot
  Q86V89 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-11 GPAT4  glycerol-3-phosphate acyltransferase 4  AGPAT6  1-acylglycerol-3-phosphate O-acyltransferase 6  Symbol and/or name change 5135510 APPROVED
2013-02-12 AGPAT6  1-acylglycerol-3-phosphate O-acyltransferase 6  AGPAT6  1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)  Symbol and/or name change 5135510 APPROVED