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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:decreased trophoblast giant cell number
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Accession:MP:0001713 term browser browse the term
Definition:fewer than normal number of cells of the extraembryonic cell layer that contributes to the placenta
Synonyms:exact_synonym: reduced trophoblast giant cell number


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decreased trophoblast giant cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh1 alkB homolog 1, histone H2A dioxygenase IAGP MGI PMID:18163532 NCBI chr12:87,474,847...87,490,609
Ensembl chr12:87,472,610...87,490,787 		JBrowse link
G Asb4 ankyrin repeat and SOCS box-containing 4 IAGP MGI PMID:24586788 NCBI chr 6:5,383,386...5,433,022
Ensembl chr 6:5,383,386...5,433,022 		JBrowse link
G Atrx ATRX, chromatin remodeler IAGP MGI PMID:16628246 NCBI chr  X:104,841,221...104,972,978
Ensembl chr  X:104,841,221...104,973,009 		JBrowse link
G Aurkb aurora kinase B IAGP MGI PMID:21613325 NCBI chr11:68,936,477...68,942,490
Ensembl chr11:68,936,473...68,942,490 		JBrowse link
G Cops2 COP9 signalosome subunit 2 IAGP MGI PMID:12972599 NCBI chr 2:125,672,222...125,701,002
Ensembl chr 2:125,672,224...125,701,059 		JBrowse link
G Csde1 cold shock domain containing E1, RNA binding IAGP MGI PMID:28386023 NCBI chr 3:102,927,347...102,965,502
Ensembl chr 3:102,927,742...102,965,502 		JBrowse link
G Cul7 cullin 7 IAGP MGI PMID:12904573 NCBI chr17:46,961,264...46,975,290
Ensembl chr17:46,961,263...46,975,290 		JBrowse link
G Ddx3x DEAD box helicase 3, X-linked IAGP MGI PMID:27179789 NCBI chr  X:13,147,261...13,160,222
Ensembl chr  X:13,147,209...13,160,291 		JBrowse link
G Egfr epidermal growth factor receptor IAGP MGI PMID:7618084 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158 		JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 IAGP MGI PMID:16966370 NCBI chr 8:125,635,325...125,676,063
Ensembl chr 8:125,635,326...125,676,063 		JBrowse link
G Ehmt2 euchromatic histone lysine N-methyltransferase 2 IAGP MGI PMID:18039842 NCBI chr17:35,117,427...35,133,049
Ensembl chr17:35,117,445...35,133,028 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 IAGP MGI PMID:19307312 NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413 		JBrowse link
G Epcam epithelial cell adhesion molecule IAGP MGI PMID:20046825 NCBI chr17:87,943,407...87,958,555
Ensembl chr17:87,943,407...87,958,557 		JBrowse link
G Esrrb estrogen related receptor, beta IAGP MGI PMID:9285590 NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402 		JBrowse link
G Fen1 flap structure specific endonuclease 1 IAGP MGI PMID:12861020 NCBI chr19:10,176,496...10,181,757
Ensembl chr19:10,176,496...10,181,533 		JBrowse link
G Gab1 growth factor receptor bound protein 2-associated protein 1 IAGP MGI PMID:10779359 PMID:10995442 NCBI chr 8:81,491,060...81,607,151
Ensembl chr 8:81,491,067...81,607,148 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:22534068 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 IAGP MGI PMID:9500551 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hgf hepatocyte growth factor IAGP MGI PMID:7854452 PMID:7854453 NCBI chr 5:16,758,493...16,827,448
Ensembl chr 5:16,758,493...16,825,150 		JBrowse link
G Il11ra1 interleukin 11 receptor subunit alpha 1 IAGP MGI PMID:15499555 NCBI chr 4:41,760,443...41,769,473
Ensembl chr 4:41,699,989...41,769,474 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 IAGP MGI PMID:10973481 NCBI chr17:28,910,316...28,967,379
Ensembl chr17:28,910,303...28,967,380 		JBrowse link
G Mdfi MyoD family inhibitor IAGP MGI PMID:9799236 NCBI chr17:48,126,253...48,145,616
Ensembl chr17:48,126,253...48,145,616 		JBrowse link
G Mecr mitochondrial trans-2-enoyl-CoA reductase IAGP MGI PMID:28369354 NCBI chr 4:131,570,755...131,595,097
Ensembl chr 4:131,570,781...131,595,097 		JBrowse link
G Met met proto-oncogene IAGP MGI PMID:10995442 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979 		JBrowse link
G Mfn2 mitofusin 2 IAGP MGI PMID:12527753 NCBI chr 4:147,958,043...147,989,527
Ensembl chr 4:147,958,056...147,989,161 		JBrowse link
G Mga MAX gene associated IAGP MGI PMID:25516968 NCBI chr 2:119,702,974...119,800,610
Ensembl chr 2:119,727,709...119,800,062 		JBrowse link
G Pcgf6 polycomb group ring finger 6 IAGP MGI PMID:28304275 NCBI chr19:47,022,056...47,039,379
Ensembl chr19:47,022,056...47,039,345 		JBrowse link
G Pcolce procollagen C-endopeptidase enhancer protein IAGP MGI PMID:28746876 NCBI chr 5:137,603,369...137,609,666
Ensembl chr 5:137,603,365...137,612,046 		JBrowse link
G Pnpla6 patatin-like phospholipase domain containing 6 IAGP MGI PMID:14749382 NCBI chr 8:3,565,341...3,594,267
Ensembl chr 8:3,565,384...3,594,267 		JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain IAGP MGI PMID:22987638 NCBI chr10:44,313,170...44,404,579
Ensembl chr10:44,313,173...44,404,497 		JBrowse link
G Rcc1l reculator of chromosome condensation 1 like IAGP MGI PMID:28746876 NCBI chr 5:134,176,897...134,207,963
Ensembl chr 5:134,176,893...134,205,613 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 IAGP MGI PMID:15210109 NCBI chr 2:180,961,504...180,998,409
Ensembl chr 2:180,961,532...180,998,409 		JBrowse link
G Stk3 serine/threonine kinase 3 IAGP MGI PMID:19786569 NCBI chr15:34,875,645...35,155,990
Ensembl chr15:34,875,642...35,179,067 		JBrowse link
G Stk4 serine/threonine kinase 4 IAGP MGI PMID:19786569 NCBI chr 2:163,916,033...163,997,444
Ensembl chr 2:163,912,242...163,997,444 		JBrowse link
G Tfap2c transcription factor AP-2, gamma IAGP MGI PMID:11940672 PMID:12015300 NCBI chr 2:172,387,599...172,400,542
Ensembl chr 2:172,391,513...172,400,542 		JBrowse link
G Tfdp1 transcription factor Dp 1 IAGP MGI PMID:12588846 NCBI chr 8:13,388,273...13,428,448
Ensembl chr 8:13,388,751...13,428,448 		JBrowse link
G Thbd thrombomodulin IAGP MGI PMID:12579195 NCBI chr 2:148,246,391...148,250,108
Ensembl chr 2:148,246,386...148,250,108 		JBrowse link
G Tlk2 tousled-like kinase 2 (Arabidopsis) IAGP MGI PMID:28708136 NCBI chr11:105,066,869...105,174,785
Ensembl chr11:105,069,633...105,174,785 		JBrowse link
G Tnks tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase IAGP MGI PMID:18612384 NCBI chr 8:35,296,333...35,432,844
Ensembl chr 8:35,293,614...35,432,844 		JBrowse link
G Tnks2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 IAGP MGI PMID:18612384 NCBI chr19:36,811,583...36,870,877
Ensembl chr19:36,811,632...36,870,877 		JBrowse link
G Ttpa tocopherol (alpha) transfer protein IAGP MGI PMID:11076932 NCBI chr 4:20,007,889...20,030,823
Ensembl chr 4:20,007,938...20,030,785 		JBrowse link
absent trophoblast giant cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc5 baculoviral IAP repeat-containing 5 IAGP MGI PMID:11084331 NCBI chr11:117,740,063...117,746,569
Ensembl chr11:117,740,077...117,746,569 		JBrowse link
G Brca1 breast cancer 1, early onset IAGP MGI PMID:8674108 NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781 		JBrowse link
G Cdx2 caudal type homeobox 2 IAGP MGI PMID:15788452 NCBI chr 5:147,237,710...147,244,059
Ensembl chr 5:147,237,615...147,244,080 		JBrowse link
G Dnm1l dynamin 1-like IAGP MGI PMID:19752021 NCBI chr16:16,130,092...16,176,863
Ensembl chr16:16,130,094...16,176,823 		JBrowse link
G Eomes eomesodermin IAGP MGI PMID:15788452 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200 		JBrowse link
G Exosc2 exosome component 2 IAGP MGI PMID:37940010 NCBI chr 2:31,560,727...31,571,593
Ensembl chr 2:31,560,727...31,571,361 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 IAGP MGI PMID:19160489 PMID:20530197 NCBI chr10:81,202,713...81,214,204
Ensembl chr10:81,202,056...81,214,350 		JBrowse link
G Rybp RING1 and YY1 binding protein IAGP MGI PMID:16055728 NCBI chr 6:100,205,526...100,264,319
Ensembl chr 6:100,205,526...100,264,446 		JBrowse link
G Sall4 spalt like transcription factor 4 IAGP MGI PMID:17060609 NCBI chr 2:168,590,252...168,609,121
Ensembl chr 2:168,590,252...168,609,863 		JBrowse link
G Senp2 SUMO/sentrin specific peptidase 2 IAGP MGI PMID:19090619 NCBI chr16:21,828,182...21,868,019
Ensembl chr16:21,828,234...21,868,019 		JBrowse link
G Tead4 TEA domain family member 4 IAGP MGI PMID:17913785 PMID:18083014 NCBI chr 6:128,204,106...128,277,776
Ensembl chr 6:128,201,251...128,277,786 		JBrowse link
G Vps4b vacuolar protein sorting 4B IAGP MGI PMID:33682352 NCBI chr 1:106,698,518...106,724,455
Ensembl chr 1:106,691,801...106,724,458 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16749
    embryo phenotype 2414
      abnormal extraembryonic tissue morphology 946
        abnormal placenta morphology 557
          abnormal trophoblast layer morphology 228
            abnormal trophoblast giant cell morphology 118
              decreased trophoblast giant cell number 53
                absent trophoblast giant cells 12
Path 2
Term Annotations click to browse term
  mammalian phenotype 16749
    embryo phenotype 2414
      abnormal embryo morphology 1842
        abnormal preimplantation embryo morphology 250
          abnormal blastocyst morphology 246
            abnormal trophectoderm morphology 161
              abnormal mural trophectoderm morphology 119
                abnormal trophoblast giant cell morphology 118
                  decreased trophoblast giant cell number 53
                    absent trophoblast giant cells 12
paths to the root