Birc5 (baculoviral IAP repeat-containing 5) - Rat Genome Database

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Gene: Birc5 (baculoviral IAP repeat-containing 5) Mus musculus
Analyze
Symbol: Birc5
Name: baculoviral IAP repeat-containing 5
RGD ID: 732772
MGI Page MGI
Description: Predicted to enable several functions, including cysteine-type endopeptidase inhibitor activity involved in apoptotic process; protein dimerization activity; and small GTPase binding activity. Involved in meiosis I and negative regulation of apoptotic process. Acts upstream of or within several processes, including negative regulation of neuron apoptotic process; regulation of insulin secretion involved in cellular response to glucose stimulus; and regulation of type B pancreatic cell proliferation. Located in cytoplasm. Is active in chromosome, centromeric region. Is expressed in several structures, including alimentary system; brain; genitourinary system; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in prostate cancer; pulmonary hypertension; and transitional cell carcinoma. Orthologous to human BIRC5 (baculoviral IAP repeat containing 5).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: A; AAC-11; Api4; apoptosis inhibitor 4; apoptosis inhibitor survivin; baculoviral IAP repeat-containing protein 5; s; survivin; survivin40; T; TIAP
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911117,740,063 - 117,746,569 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11117,740,077 - 117,746,569 (+)EnsemblGRCm39 Ensembl
GRCm3811117,849,237 - 117,855,743 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11117,849,251 - 117,855,743 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711117,710,551 - 117,717,057 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611117,665,327 - 117,671,833 (+)NCBIMGSCv36mm8
Celera11129,594,259 - 129,600,765 (+)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1182.96NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
Birc5Mouseacute necrotizing pancreatitis  ISOBirc5 (Rattus norvegicus)2293139mRNA:increased expression:pancreasRGD 
Birc5Mouseacute pancreatitis  ISOBirc5 (Rattus norvegicus)9586043mRNA and protein:increased expression:pancreasRGD 
Birc5Mouseadrenocortical carcinoma exacerbatesISOBIRC5 (Homo sapiens)9068941mRNA:increased expression:adrenal gland (human)RGDPMID:31964418 and REF_RGD_ID:153344516
Birc5Mousebladder urothelial carcinoma disease_progressionISOBIRC5 (Homo sapiens)9068941mRNA:increased expression:urinary bladder (human)RGDPMID:31964418 and REF_RGD_ID:153344516
Birc5Mousebrain glioma exacerbatesISOBIRC5 (Homo sapiens)9068941mRNA:increased expression:brain (human)RGDPMID:31964418 and REF_RGD_ID:153344516
Birc5MouseBrain Injuries  ISOBirc5 (Rattus norvegicus)2293136mRNA more ...RGD 
Birc5Mousebreast carcinoma exacerbatesISOBIRC5 (Homo sapiens)9068941mRNA:increased expression:breast (human)RGDPMID:31964418 and REF_RGD_ID:153344516
Birc5MouseBreast Neoplasms disease_progressionISOBIRC5 (Homo sapiens)2293104 RGD 
Birc5MouseBreast Neoplasms disease_progressionISOBIRC5 (Homo sapiens)2293090 RGD 
Birc5MouseBreast Neoplasms disease_progressionISOBIRC5 (Homo sapiens)2293105mRNA:increased expression:bloodRGD 
Birc5MouseBreast Neoplasms disease_progressionISOBIRC5 (Homo sapiens)2293092protein:increased expression:breastRGD 
Birc5Mousechromophobe renal cell carcinoma exacerbatesISOBIRC5 (Homo sapiens)9068941mRNA:increased expression:kidney (human)RGDPMID:31964418 and REF_RGD_ID:153344516
Birc5Mouseclear cell renal cell carcinoma exacerbatesISOBIRC5 (Homo sapiens)9068941mRNA:increased expression:kidney (human)RGDPMID:31964418 and REF_RGD_ID:153344516
Birc5Mousecolorectal cancer  ISOBIRC5 (Homo sapiens)153344527mRNA and protein:increased expression:colonic mucosa (human)RGD 
Birc5Mousecongestive heart failure  ISOBirc5 (Rattus norvegicus)9068941associated with Hypertension and protein:decreased expression:cardiac muscle cellRGDPMID:16257070 and REF_RGD_ID:2293134
Birc5MouseCOVID-19  ISOBIRC5 (Homo sapiens)9068941mRNA:increased expression:peripheral blood mononuclear cell (human)RGDPMID:32228226 and REF_RGD_ID:28912744
Birc5Mouseductal carcinoma in situ disease_progressionISOBIRC5 (Homo sapiens)2293106protein:increased expression:breastRGD 
Birc5Mouseendometrial hyperplasia  ISOBIRC5 (Homo sapiens)2298940protein:increased expression:endometriumRGD 
Birc5MouseEndometrioid Carcinomas  ISOBIRC5 (Homo sapiens)2298940protein:increased expression:endometriumRGD 
Birc5Mouseendometriosis  ISOBirc5 (Rattus norvegicus)2293122 RGD 
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Original Reference(s)
Birc5MouseIdiopathic Generalized Epilepsy  ISOBIRC5 (Homo sapiens)8554872ClinVar Annotator: match by term: Idiopathic generalized epilepsyClinVarPMID:28492532
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Birc5Mouseacute megakaryocytic leukemia  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:16166298
Birc5Mouseacute promyelocytic leukemia  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:27770503
Birc5Mouseadenocarcinoma  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:26432044
Birc5Mouseadult T-cell leukemia/lymphoma  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:16497974
Birc5MouseBreast Neoplasms  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:16322251 and PMID:16818634
Birc5Mousechronic myeloid leukemia  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:16254145
Birc5MouseColonic Neoplasms  ISOBIRC5 (Homo sapiens)11554173CTD more ...CTDPMID:16224667 and PMID:19147571
Birc5MouseColorectal Neoplasms  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:16364925
Birc5MouseEndometrial Neoplasms  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19363521
Birc5Mousehepatocellular carcinoma  ISOBIRC5 (Homo sapiens)11554173CTD more ...CTDPMID:16086872 and PMID:20514400
Birc5MouseLung Neoplasms  ISOBIRC5 (Homo sapiens)11554173CTD more ...CTDPMID:15981204 and PMID:16108013
Birc5Mouselung non-small cell carcinoma  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:16382892
Birc5MouseOvarian Neoplasms  ISOBIRC5 (Homo sapiens)11554173CTD more ...CTDPMID:15970709 more ...
Birc5MouseProstatic Neoplasms  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:29541389
Birc5Mouserenal cell carcinoma  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:16188142
Birc5Mousesmall cell carcinoma  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15981204
Birc5Mousesquamous cell carcinoma  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:26432044
Birc5MouseStomach Neoplasms  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15993841
Birc5MouseUterine Cervical Neoplasms  ISOBIRC5 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:26432044
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Birc5Mouse(+)-Tetrandrine decreases expressionISOBIRC5 (Homo sapiens)6480464tetrandrine results in decreased expression of BIRC5 mRNACTDPMID:18495333
Birc5Mouse(+)-Tetrandrine affects bindingISOBIRC5 (Homo sapiens)6480464tetrandrine binds to BIRC5 promoterCTDPMID:17968851
Birc5Mouse(-)-anisomycin multiple interactionsISOBIRC5 (Homo sapiens)6480464Anisomycin promotes the reaction [(+)-JQ1 compound results in decreased expression of BIRC5 protein]CTDPMID:23872705
Birc5Mouse(-)-Arctigenin decreases expressionISOBIRC5 (Homo sapiens)6480464arctigenin results in decreased expression of BIRC5 mRNACTDPMID:20510325
Birc5Mouse(-)-epigallocatechin 3-gallate multiple interactionsISOBIRC5 (Homo sapiens)6480464[epigallocatechin gallate co-treated with leptomycin B] results in decreased expression of BIRC5 mRNA and [epigallocatechin gallate co-treated with leptomycin B] results in decreased expression of BIRC5 proteinCTDPMID:25922640
Birc5Mouse(-)-gambogic acid multiple interactionsISOBIRC5 (Homo sapiens)6480464[gambogic acid co-treated with Doxorubicin] affects the expression of BIRC5 protein and SB 203580 affects the reaction [[gambogic acid co-treated with Doxorubicin] affects the expression of BIRC5 protein]CTDPMID:25824409
Birc5Mouse(-)-gambogic acid affects expressionISOBIRC5 (Homo sapiens)6480464gambogic acid affects the expression of BIRC5 proteinCTDPMID:25824409
Birc5Mouse(-)-noscapine decreases expressionISOBIRC5 (Homo sapiens)6480464Noscapine results in decreased expression of BIRC5 proteinCTDPMID:20674069
Birc5Mouse(-)-noscapine decreases response to substanceISOBIRC5 (Homo sapiens)6480464BIRC5 protein results in decreased susceptibility to NoscapineCTDPMID:22848370
Birc5Mouse(-)-noscapine multiple interactionsISOBIRC5 (Homo sapiens)6480464Noscapine promotes the reaction [Cisplatin results in decreased expression of BIRC5 protein]CTDPMID:20674069
Birc5Mouse(-)-noscapine increases expressionISOBIRC5 (Homo sapiens)6480464Noscapine results in increased expression of BIRC5 mRNA and Noscapine results in increased expression of BIRC5 proteinCTDPMID:22848370
Birc5Mouse(1->4)-beta-D-glucan multiple interactionsEXP 6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of BIRC5 mRNACTDPMID:36331819
Birc5Mouse(20R)-protopanaxadiol affects expressionISOBIRC5 (Homo sapiens)6480464protopanaxadiol affects the expression of BIRC5 proteinCTDPMID:31805304
Birc5Mouse(20S)-ginsenoside Rg3 decreases expressionISOBIRC5 (Homo sapiens)6480464ginsenoside Rg3 results in decreased expression of BIRC5 mRNA and ginsenoside Rg3 results in decreased expression of BIRC5 proteinCTDPMID:19778801
Birc5Mouse(S)-naringenin increases expressionISOBIRC5 (Homo sapiens)6480464naringenin metabolite results in increased expression of BIRC5 mRNACTDPMID:36235125
Birc5Mouse(S)-naringenin multiple interactionsISOBIRC5 (Homo sapiens)6480464[naringenin co-treated with bisphenol A] results in increased expression of BIRC5 mRNA and [naringenin metabolite co-treated with bisphenol A] results in increased expression of BIRC5 mRNACTDPMID:36235125
Birc5Mouse(S)-nicotine increases expressionISOBIRC5 (Homo sapiens)6480464Nicotine results in increased expression of BIRC5 mRNA and Nicotine results in increased expression of BIRC5 proteinCTDPMID:16601104 more ...
Birc5Mouse(S)-nicotine multiple interactionsISOBIRC5 (Homo sapiens)6480464Curcumin inhibits the reaction [Nicotine results in increased expression of BIRC5 protein] more ...CTDPMID:16601104 and PMID:20727180
Birc5Mouse1'-acetoxychavicol acetate multiple interactionsISOBIRC5 (Homo sapiens)64804641'-acetoxychavicol acetate inhibits the reaction [TNF protein results in increased expression of BIRC5 protein]CTDPMID:15905586
Birc5Mouse1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane decreases expressionISOBirc5 (Rattus norvegicus)6480464o and p'-DDT analog results in decreased expression of BIRC5 mRNACTDPMID:22937105

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Biological Process
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Original Reference(s)
Birc5Mouseapoptotic process involved_inIEAUniProtKB-KW:KW-00532290270 UniProtGO_REF:0000043
Birc5Mousecell division involved_inISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mousecell division involved_inISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousecellular response to ethanol  ISOBirc5 (Rattus norvegicus)9068941 RGDPMID:20610854 and REF_RGD_ID:9586044
Birc5Mousecellular response to stem cell factor stimulus  ISOBirc5 (Rattus norvegicus)9068941 RGDPMID:15130521 and REF_RGD_ID:9586041
Birc5Mouseestablishment of chromosome localization involved_inISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mouseestablishment of chromosome localization involved_inISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5MouseG2/M transition of mitotic cell cycle involved_inISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5MouseG2/M transition of mitotic cell cycle involved_inISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mousemeiosis I involved_inIDA 2290270 PMID:25645018MGIPMID:25645018
Birc5Mousemicrotubule cytoskeleton organization acts_upstream_of_or_withinIMPMGI:26813482290270 PMID:11084331MGIPMID:11084331
Birc5Mousemitotic cell cycle involved_inNAS 2290270 PMID:17956729ComplexPortalPMID:17956729
Birc5Mousemitotic cytokinesis involved_inISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousemitotic cytokinesis involved_inNAS 2290270 PMID:17956729ComplexPortalPMID:17956729
Birc5Mousemitotic cytokinesis involved_inISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mousemitotic spindle assembly checkpoint signaling involved_inISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousemitotic spindle assembly checkpoint signaling involved_inISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mousemitotic spindle midzone assembly involved_inNAS 2290270 PMID:17956729ComplexPortalPMID:17956729
Birc5Mousemitotic spindle organization involved_inNAS 2290270 PMID:17956729ComplexPortalPMID:17956729
Birc5Mousenegative regulation of apoptotic process involved_inISSUniProtKB:O15392 and UniProtKB:O15392-12290270 UniProtGO_REF:0000024
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Cellular Component
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Birc5Mouseapical plasma membrane  ISOBirc5 (Rattus norvegicus)9068941 RGDPMID:17982126 and REF_RGD_ID:2293128
Birc5Mouseapical plasma membrane located_inISOBirc5 (Rattus norvegicus)2290270 GO_CentralGO_REF:0000096
Birc5Mousecentriole located_inISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mousecentriole located_inISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousechromosome passenger complex part_ofISOComplexPortal:CPX-1162290270 ComplexPortalGO_REF:0000114
Birc5Mousechromosome passenger complex part_ofISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousechromosome passenger complex part_ofISSUniProtKB:Q53HL22290270 UniProtGO_REF:0000024
Birc5Mousechromosome, centromeric region located_inISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mousechromosome, centromeric region is_active_inIDA 2290270 PMID:25645018MGIPMID:25645018
Birc5Mousechromosome, centromeric region located_inISOUniProtKB:O153922290270 PMID:11084331GO_CentralGO_REF:0000119 and PMID:11084331
Birc5Mousecytoplasm is_active_inIBAPANTHER:PTN000005166 more ...2290270 GO_CentralGO_REF:0000033
Birc5Mousecytoplasm located_inIDA 2290270 PMID:12679106MGIPMID:12679106
Birc5Mousecytoplasm located_inISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousecytoplasm located_inISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mousecytoplasmic microtubule located_inISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousecytoplasmic microtubule located_inISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mousecytosol located_inISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mousecytosol located_inISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mouseinterphase microtubule organizing center located_inISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mouseinterphase microtubule organizing center located_inISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
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Molecular Function
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Birc5Mousecysteine-type endopeptidase inhibitor activity enablesIEAUniProtKB-KW:KW-07892290270 UniProtGO_REF:0000043
Birc5Mousecysteine-type endopeptidase inhibitor activity involved in apoptotic process enablesISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousecysteine-type endopeptidase inhibitor activity involved in apoptotic process enablesIBAPANTHER:PTN000953271 more ...2290270 GO_CentralGO_REF:0000033
Birc5Mousecysteine-type endopeptidase inhibitor activity involved in apoptotic process enablesISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mouseenzyme binding enablesISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mouseidentical protein binding enablesISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousemicrotubule binding enablesISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mousemicrotubule binding enablesISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mouseprotein binding enablesIPIPR:Q8BHX32290270 PMID:17881355MGIPMID:17881355
Birc5Mouseprotein binding enablesIPIUniProtKB:Q5BJ292290270 PMID:25778398UniProtPMID:25778398
Birc5Mouseprotein heterodimerization activity enablesISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mouseprotein homodimerization activity enablesISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mouseprotein homodimerization activity enablesISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mouseprotein-folding chaperone binding enablesISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousesmall GTPase binding enablesISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousetubulin binding enablesISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousetubulin binding enablesISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
Birc5Mouseubiquitin protein ligase activity enablesIBAPANTHER:PTN000799425 more ...2290270 GO_CentralGO_REF:0000033
Birc5Mousezinc ion binding enablesISOUniProtKB:O153922290270 GO_CentralGO_REF:0000119
Birc5Mousezinc ion binding enablesISSUniProtKB:O15392-12290270 UniProtGO_REF:0000024
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RGD Manual Annotations


  
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Original Reference(s)
Birc5Mousehistone modification pathway   ISOBIRC5 (Homo sapiens)9479074 RGD 

Imported Annotations - KEGG (archival)

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Birc5Mousecolorectal cancer pathway   IEA 6907045 KEGGmmu:05210
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Original Reference(s)
Birc5Mouseabnormal apoptosis  IAGP 5509061 MGIPMID:12145814
Birc5Mouseabnormal cell cycle  IAGP 5509061 MGIPMID:11084331
Birc5Mouseabnormal cell cycle  IAGP 5509061 MGIPMID:14757745
Birc5Mouseabnormal cell nucleus count  IAGP 5509061 MGIPMID:11084331
Birc5Mouseabnormal cell nucleus morphology  IAGP 5509061 MGIPMID:11084331
Birc5Mouseabnormal embryonic tissue morphology  IAGP 5509061 MGIPMID:11084331
Birc5Mouseabnormal mitotic spindle morphology  IAGP 5509061 MGIPMID:11084331
Birc5Mouseabnormal oxidative phosphorylation  IAGP 5509061 MGIPMID:12145814
Birc5Mouseabnormal T cell differentiation  IAGP 5509061 MGIPMID:14699085
Birc5Mouseabnormal T cell morphology  IAGP 5509061 MGIPMID:14757745
Birc5Mouseabnormal thymus corticomedullary boundary morphology  IAGP 5509061 MGIPMID:14757745
Birc5Mouseabsent blastocoele  IAGP 5509061 MGIPMID:11084331
Birc5Mouseabsent trophoblast giant cells  IAGP 5509061 MGIPMID:11084331
Birc5Mousebinucleate  IAGP 5509061 MGIPMID:11084331
Birc5Mousedecreased double-negative T cell number  IAGP 5509061 MGIPMID:14757745
Birc5Mousedecreased double-positive T cell number  IAGP 5509061 MGIPMID:14699085
Birc5Mousedecreased T cell number  IAGP 5509061 MGIPMID:14699085
Birc5Mousedecreased thymocyte number  IAGP 5509061 MGIPMID:14757745
Birc5Mouseembryonic lethality before implantation, complete penetrance  IAGP 5509061 MGIPMID:12145814
Birc5Mouseembryonic lethality between implantation and somite formation, complete penetrance  IAGP 5509061 MGIPMID:11084331
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Reference Title
Reference Citation
1. Autoantibodies to survivin in the sera of patients with infiltrating ductal carcinoma of the breast. Al-Joudi FS and Iskandar ZA, Med J Malaysia. 2006 Aug;61(3):302-6.
2. The prognostic significance of COX-2 and survivin expression in ovarian cancer. Athanassiadou P, etal., Pathol Res Pract. 2008;204(4):241-9. Epub 2008 Jan 2.
3. Survivin expression in in situ and invasive breast cancer relates to COX-2 expression and DCIS recurrence. Barnes N, etal., Br J Cancer. 2006 Jan 30;94(2):253-8.
4. Altered Cytoplasmic-to-Nuclear Ratio of Survivin Is a Prognostic Indicator in Breast Cancer. Brennan DJ, etal., Clin Cancer Res. 2008 May 1;14(9):2681-9.
5. Expression of inhibitor of apoptosis family proteins in human oral squamous cell carcinogenesis. Chen YK, etal., Head Neck. 2011 Jul;33(7):985-98. doi: 10.1002/hed.21582. Epub 2010 Oct 21.
6. Death receptor 5 (DR5) and a 5-gene apoptotic biomarker panel with significant differential diagnostic potential in colorectal cancer. Devetzi M, etal., Sci Rep. 2016 Nov 9;6:36532. doi: 10.1038/srep36532.
7. Defective neurogenesis in citron kinase knockout mice by altered cytokinesis and massive apoptosis. Di Cunto F, etal., Neuron 2000 Oct;28(1):115-27.
8. Expression of survivin, PTEN and p27 in normal, hyperplastic, and carcinomatous endometrium. Erkanli S, etal., Int J Gynecol Cancer. 2006 May-Jun;16(3):1412-8.
9. Zhonghua zhong liu za zhi [Chinese journal of oncology] Feng ZB, etal., Zhonghua Zhong Liu Za Zhi. 2007 Sep;29(9):662-5.
10. Angiogenic signal triggered by ischemic stress induces myocardial repair in rat during chronic infarction. Fukuda S, etal., J Mol Cell Cardiol. 2004 Apr;36(4):547-59.
11. Transcriptional expression of survivin and its splice variants in cervical carcinomas. Futakuchi H, etal., Int J Gynecol Cancer. 2007 Sep-Oct;17(5):1092-8.
12. Prostate-derived Ets transcription factor as a favorable prognostic marker in ovarian cancer patients. Ghadersohi A, etal., Int J Cancer. 2008 Sep 15;123(6):1376-84.
13. Expression patterns of inhibitor of apoptosis proteins in malignant pleural mesothelioma. Gordon GJ, etal., J Pathol. 2007 Mar;211(4):447-54. doi: 10.1002/path.2121.
14. Expression of human telomerase reverse transcriptase and survivin gene in patients with myelodysplastic syndrome Jiao XL, etal., Zhongguo Shi Yan Xue Ye Xue Za Zhi. 2008 Apr;16(2):294-8.
15. Detection of autoantibodies to survivin in cervical mucus from patients with human papillomavirus-associated cervical cancer and precursor lesions. Jimenez LG, etal., Autoimmunity. 2007 Feb;40(1):66-72.
16. Cell-specific upregulation of survivin after experimental traumatic brain injury in rats. Johnson EA, etal., J Neurotrauma. 2004 Sep;21(9):1183-95.
17. Survivin expression in patients with non-muscle-invasive urothelial cell carcinoma of the bladder. Karam JA, etal., Urology. 2007 Sep;70(3):482-6.
18. Intracranial stereotaxic cannulation for development of orthotopic glioblastoma allograft in Sprague-Dawley rats and histoimmunopathological characterization of the brain tumor. Karmakar S, etal., Neurochem Res. 2007 Dec;32(12):2235-42. Epub 2007 Aug 15.
19. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
20. Gene Expression of Survivin and Its Spliced Isoforms Associated with Proliferation and Aggressive Phenotypes of Prostate Cancer. Koike H, etal., Urology. 2008 Mar 10;.
1 to 20 of 53 rows
1 to 10 of 20 rows
PMID:9307294   PMID:9422522   PMID:9916987   PMID:9918813   PMID:9990045   PMID:9990849   PMID:10349636   PMID:10397257   PMID:10567210   PMID:10601032   PMID:10666222   PMID:10922068  
PMID:10949038   PMID:11042159   PMID:11076861   PMID:11084331   PMID:11305929   PMID:12145814   PMID:12172543   PMID:12193553   PMID:12220508   PMID:12239157   PMID:12477932   PMID:12535669  
PMID:12566297   PMID:12679106   PMID:12805209   PMID:12937134   PMID:12969960   PMID:14531791   PMID:14610273   PMID:14634619   PMID:14681479   PMID:14691545   PMID:14699085   PMID:14751927  
PMID:14757745   PMID:15148334   PMID:15215174   PMID:15226823   PMID:15258565   PMID:15271987   PMID:15369798   PMID:15489334   PMID:15520881   PMID:15578713   PMID:15618518   PMID:15623349  
PMID:15894279   PMID:15908567   PMID:16049172   PMID:16079309   PMID:16141072   PMID:16141073   PMID:16414041   PMID:16470228   PMID:16889755   PMID:16984408   PMID:17113145   PMID:17128412  
PMID:17142738   PMID:17255535   PMID:17299096   PMID:17576776   PMID:17804696   PMID:17881355   PMID:17881769   PMID:17956729   PMID:17982126   PMID:18038450   PMID:18245663   PMID:18287559  
PMID:18332262   PMID:18337066   PMID:18369314   PMID:18599523   PMID:18632631   PMID:18668521   PMID:18719335   PMID:18799693   PMID:18835033   PMID:18851829   PMID:19004856   PMID:19211757  
PMID:19333244   PMID:19339696   PMID:19395375   PMID:19411632   PMID:19454669   PMID:19470765   PMID:19644667   PMID:19767411   PMID:19806029   PMID:19834489   PMID:19949374   PMID:19956869  
PMID:20030047   PMID:20051123   PMID:20080598   PMID:20126979   PMID:20129247   PMID:20133811   PMID:20709413   PMID:20807437   PMID:20864587   PMID:21041232   PMID:21124930   PMID:21237508  
PMID:21330050   PMID:21440680   PMID:21454573   PMID:21512031   PMID:21715311   PMID:21862448   PMID:21873635   PMID:22252435   PMID:22334690   PMID:22421546   PMID:22491741   PMID:22554510  
1 to 10 of 20 rows



Birc5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911117,740,063 - 117,746,569 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11117,740,077 - 117,746,569 (+)EnsemblGRCm39 Ensembl
GRCm3811117,849,237 - 117,855,743 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11117,849,251 - 117,855,743 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711117,710,551 - 117,717,057 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611117,665,327 - 117,671,833 (+)NCBIMGSCv36mm8
Celera11129,594,259 - 129,600,765 (+)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1182.96NCBI
BIRC5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381778,214,253 - 78,225,635 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1778,214,186 - 78,225,636 (+)EnsemblGRCh38hg38GRCh38
GRCh371776,210,334 - 76,221,716 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361773,721,872 - 73,733,311 (+)NCBINCBI36Build 36hg18NCBI36
Build 341773,721,871 - 73,733,310NCBI
Celera1772,806,306 - 72,817,744 (+)NCBICelera
Cytogenetic Map17q25.3NCBI
HuRef1771,634,433 - 71,645,847 (+)NCBIHuRef
CHM1_11776,274,801 - 76,286,240 (+)NCBICHM1_1
T2T-CHM13v2.01779,108,345 - 79,119,727 (+)NCBIT2T-CHM13v2.0
Birc5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810103,567,369 - 103,580,069 (+)NCBIGRCr8
mRatBN7.210103,072,530 - 103,081,382 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10103,073,408 - 103,081,380 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10108,174,435 - 108,182,841 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010107,637,549 - 107,645,954 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010102,994,242 - 103,002,165 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010106,856,097 - 106,864,419 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10106,856,097 - 106,864,413 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010106,494,775 - 106,503,097 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera10101,633,441 - 101,641,341 (+)NCBICelera
Cytogenetic Map10q32.2NCBI
BIRC5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21994,265,019 - 94,276,237 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11799,094,471 - 99,105,679 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01772,292,332 - 72,303,493 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11777,842,724 - 77,854,159 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1777,842,724 - 77,854,159 (+)Ensemblpanpan1.1panPan2
BIRC5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.192,930,308 - 2,959,307 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha93,613,921 - 3,619,074 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.093,608,303 - 3,613,418 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.193,631,386 - 3,636,494 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.093,755,584 - 3,761,556 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.093,836,949 - 3,842,103 (-)NCBIUU_Cfam_GSD_1.0
Birc5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056023,591,620 - 3,599,727 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365942,812,238 - 2,820,636 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365942,812,165 - 2,820,618 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BIRC5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl123,747,279 - 3,755,215 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1123,747,276 - 3,755,214 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
BIRC5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11670,226,824 - 70,237,000 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607741,335,707 - 41,347,619 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Birc5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248017,727,093 - 7,735,940 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248017,727,084 - 7,735,946 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Birc5
230 total Variants

Predicted Target Of
Summary Value
Count of predictions:1342
Count of miRNA genes:629
Interacting mature miRNAs:762
Transcripts:ENSMUST00000081387, ENSMUST00000093906
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 24 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189869251121973369Mouse
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191604608121973369Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1300944Alcp20_malcohol preference locus 20 (mouse)Not determined1195403965121973369Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186608320120608320Mouse
4141465Dbm2_mdiabetes modifier 2 (mouse)Not determined94437183118022724Mouse
1301012Vispl_mvisual placing (mouse)Not determined11101022590121973369Mouse
15039374Adip29_madiposity 29 (mouse)1186608320120608320Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194063779118022724Mouse
1301983Berr2_mberghei resistance locus 2 (mouse)Not determined1198352609121973369Mouse

1 to 10 of 24 rows
Birc5  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11E2UniSTS
cM Map11 UniSTS






1 to 18 of 18 rows
RefSeq Transcripts NM_001012273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB013819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB036741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF077349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF077351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF115517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI413910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL591433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY023910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN724527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU366955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HD050397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 18 of 18 rows

Ensembl Acc Id: ENSMUST00000081387   ⟹   ENSMUSP00000079124
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11117,740,077 - 117,746,558 (+)Ensembl
GRCm38.p6 Ensembl11117,849,251 - 117,855,732 (+)Ensembl
Ensembl Acc Id: ENSMUST00000093906   ⟹   ENSMUSP00000091433
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11117,740,145 - 117,746,569 (+)Ensembl
GRCm38.p6 Ensembl11117,849,319 - 117,855,743 (+)Ensembl
RefSeq Acc Id: NM_001012273   ⟹   NP_001012273
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911117,740,063 - 117,746,569 (+)NCBI
GRCm3811117,849,237 - 117,855,743 (+)ENTREZGENE
MGSCv3711117,710,551 - 117,717,057 (+)RGD
Celera11129,594,259 - 129,600,765 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_009689   ⟹   NP_033819
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911117,740,063 - 117,746,569 (+)NCBI
GRCm3811117,849,237 - 117,855,743 (+)ENTREZGENE
MGSCv3711117,710,551 - 117,717,057 (+)RGD
Celera11129,594,259 - 129,600,765 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_001012273   ⟸   NM_001012273
- Peptide Label: isoform 3
- UniProtKB: O70201 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_033819   ⟸   NM_009689
- Peptide Label: isoform 1
- UniProtKB: Q9WU53 (UniProtKB/Swiss-Prot),   Q923F7 (UniProtKB/Swiss-Prot),   Q9WU54 (UniProtKB/Swiss-Prot),   O70201 (UniProtKB/Swiss-Prot),   Q549P2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000091433   ⟸   ENSMUST00000093906
Ensembl Acc Id: ENSMUSP00000079124   ⟸   ENSMUST00000081387

Name Modeler Protein Id AA Range Protein Structure
AF-O70201-F1-model_v2 AlphaFold O70201 1-140 view protein structure

RGD ID:6820496
Promoter ID:MM_KWN:10751
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000106322,   NM_001012273,   NM_009689
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611117,710,206 - 117,710,706 (+)MPROMDB
RGD ID:8677540
Promoter ID:EPDNEW_M16801
Type:initiation region
Name:Birc5_1
Description:Mus musculus baculoviral IAP repeat-containing 5 , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811117,849,322 - 117,849,382EPDNEW


1 to 26 of 26 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000017716 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000081387 ENTREZGENE
  ENSMUST00000081387.11 UniProtKB/Swiss-Prot
  ENSMUST00000093906 ENTREZGENE
  ENSMUST00000093906.5 UniProtKB/Swiss-Prot
Gene3D-CATH Inhibitor Of Apoptosis Protein (2mihbC-IAP-1), Chain A UniProtKB/Swiss-Prot
InterPro Baculoviral_IAP UniProtKB/Swiss-Prot
  BIR_rpt UniProtKB/Swiss-Prot
KEGG Report mmu:11799 UniProtKB/Swiss-Prot
MGD MGI:1203517 ENTREZGENE
NCBI Gene 11799 ENTREZGENE
PANTHER BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 5 UniProtKB/Swiss-Prot
  DETERIN UniProtKB/Swiss-Prot
Pfam BIR UniProtKB/Swiss-Prot
PhenoGen Birc5 PhenoGen
PROSITE BIR_REPEAT_2 UniProtKB/Swiss-Prot
SMART BIR UniProtKB/Swiss-Prot
Superfamily-SCOP Inhibitor of apoptosis (IAP) repeat UniProtKB/Swiss-Prot
UniProt BIRC5_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q549P2 ENTREZGENE, UniProtKB/TrEMBL
  Q923F7 ENTREZGENE
  Q9WU53 ENTREZGENE
  Q9WU54 ENTREZGENE
UniProt Secondary Q923F7 UniProtKB/Swiss-Prot
  Q9WU53 UniProtKB/Swiss-Prot
  Q9WU54 UniProtKB/Swiss-Prot
1 to 26 of 26 rows