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ONTOLOGY REPORT - ANNOTATIONS

Term:non-motile cilium
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Accession:GO:0097730 term browser browse the term
Definition:A cilium which may have a variable array of axonemal microtubules but does not contain molecular motors.
Synonyms:exact_synonym: immotile cilium;   nonmotile cilium
 related_synonym: immotile primary cilium;   nonmotile primary cilia;   nonmotile primary cilium;   sensory cilium
 alt_id: GO:0031513


show annotations for term's descendants           Sort by:
non-motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 located_in ISO (PMID:19625297), (PMID:19718039) MGI PMID:19625297 PMID:19718039 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351 		JBrowse link
G ANO2 anoctamin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr27:38,976,761...39,320,764
Ensembl chr27:38,833,837...39,320,142 		JBrowse link
G ARL13B ADP ribosylation factor like GTPase 13B is_active_in IBA GO_Central GO_REF:0000033 NCBI chr33:1,698,360...1,762,846
Ensembl chr33:1,698,363...1,761,641 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 located_in ISO (PMID:17574030) BHF-UCL PMID:17574030 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G CEP89 centrosomal protein 89 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:119,124,042...119,197,394
Ensembl chr 1:119,123,933...119,197,338 		JBrowse link
G CFAP69 cilia and flagella associated protein 69 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:16,154,334...16,209,776
Ensembl chr14:16,154,562...16,209,858 		JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 located_in ISO PMID:23300604 MGI PMID:23300604 RGD:10448945 NCBI chr30:20,778,497...20,871,304
Ensembl chr30:20,815,775...20,871,220 		JBrowse link
G DRD1 dopamine receptor D1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G DRD2 dopamine receptor D2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
G DRD5 dopamine receptor D5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:69,621,187...69,623,522
Ensembl chr 3:69,621,734...69,623,893 		JBrowse link
G ERICH3 glutamate rich 3 located_in ISO (PMID:31712586) UniProt PMID:31712586 NCBI chr 6:71,706,954...71,802,470
Ensembl chr 6:71,746,262...71,788,635 		JBrowse link
G GALR3 galanin receptor 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,814,942...26,819,725
Ensembl chr10:26,814,942...26,816,727 		JBrowse link
G GLIS2 GLIS family zinc finger 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,048,380...37,069,740
Ensembl chr 6:37,048,367...37,088,880 		JBrowse link
G GPR83 G protein-coupled receptor 83 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:6,536,486...6,546,859
Ensembl chr21:6,536,485...6,546,859 		JBrowse link
G HYLS1 HYLS1 centriolar and ciliogenesis associated is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 5:8,589,606...8,605,196
Ensembl chr 5:8,589,369...8,605,317 		JBrowse link
G IFT122 intraflagellar transport 122 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr20:5,644,002...5,716,702
Ensembl chr20:5,644,089...5,715,906 		JBrowse link
G IFT140 intraflagellar transport 140 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,262,887...39,308,912
Ensembl chr 6:39,295,045...39,308,758 		JBrowse link
G IFT20 intraflagellar transport 20 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 9:42,581,117...42,587,830
Ensembl chr 9:42,581,433...42,587,804 		JBrowse link
G IFT88 intraflagellar transport 88 located_in
is_active_in		 ISO
IBA		 (PMID:16254602) MGI
GO_Central		 PMID:16254602 GO_REF:0000033 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266 		JBrowse link
G LOC100856176 tubulin gamma-2 chain located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,322,054...20,326,696
Ensembl chr 9:20,322,253...20,363,455 		JBrowse link
G MCHR1 melanin concentrating hormone receptor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:24,526,687...24,560,948
Ensembl chr10:24,526,693...24,559,836 		JBrowse link
G MDM1 Mdm1 nuclear protein located_in ISO (PMID:23300604) MGI PMID:23300604 NCBI chr10:10,523,656...10,552,824
Ensembl chr10:10,524,328...10,696,181 		JBrowse link
G MLF1 myeloid leukemia factor 1 located_in ISO (PMID:23300604) MGI PMID:23300604 NCBI chr23:51,918,504...51,935,164
Ensembl chr23:51,901,983...51,933,796 		JBrowse link
G NPHP4 nephrocystin 4 located_in
is_active_in		 IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:59,819,236...59,936,220
Ensembl chr 5:59,814,274...59,929,386 		JBrowse link
G NPY2R neuropeptide Y receptor Y2 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:52,790,136...52,797,785
Ensembl chr15:52,794,671...52,795,818 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 NOT|located_in ISO (PMID:17314247) MGI PMID:17314247 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400 		JBrowse link
G PCM1 pericentriolar material 1 NOT|located_in ISO (PMID:17574030) BHF-UCL PMID:17574030 NCBI chr16:41,212,733...41,291,654
Ensembl chr16:41,214,417...41,291,376 		JBrowse link
G PKD1L1 polycystin 1 like 1, transient receptor potential channel interacting located_in ISO (PMID:24336289) UniProt PMID:24336289 NCBI chr16:119,639...199,418 JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel located_in IEA Ensembl GO_REF:0000107 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438 		JBrowse link
G PKD2L1 polycystin 2 like 1, transient receptor potential cation channel located_in IEA Ensembl GO_REF:0000107 NCBI chr28:13,045,749...13,076,072
Ensembl chr28:13,045,829...13,076,485 		JBrowse link
G QRFPR pyroglutamylated RFamide peptide receptor located_in ISO (PMID:24316073) MGI PMID:24316073 NCBI chr19:18,717,060...18,769,733
Ensembl chr19:18,717,339...18,767,061 		JBrowse link
G RAB8A RAB8A, member RAS oncogene family located_in ISO (PMID:17574030), (PMID:24648492)
(PMID:19625297), (PMID:20592197)		 BHF-UCL
MGI		 PMID:17574030 PMID:19625297 PMID:20592197 PMID:24648492 NCBI chr20:46,334,601...46,351,907
Ensembl chr20:46,334,601...46,351,907 		JBrowse link
G RPGRIP1 RPGR interacting protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:18,316,887...18,388,724
Ensembl chr15:18,316,887...18,387,735 		JBrowse link
G SEPTIN2 septin 2 located_in ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chr25:51,296,486...51,330,508
Ensembl chr25:51,296,554...51,328,616 		JBrowse link
G SEPTIN7 septin 7 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:47,395,704...47,494,873
Ensembl chr14:47,395,603...47,494,385 		JBrowse link
G SEPTIN9 septin 9 located_in ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chr 9:3,495,764...3,571,755
Ensembl chr 9:3,448,793...3,616,732 		JBrowse link
G SSTR3 somatostatin receptor 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:27,324,067...27,332,570
Ensembl chr10:27,329,174...27,330,451 		JBrowse link
G TTC8 tetratricopeptide repeat domain 8 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 8:60,061,670...60,115,464
Ensembl chr 8:60,061,732...60,115,075 		JBrowse link
G TUBG1 tubulin, gamma 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,358,683...20,363,455
Ensembl chr 9:20,322,253...20,363,455 		JBrowse link
G WDR19 WD repeat domain 19 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:73,115,560...73,213,823
Ensembl chr 3:73,137,250...73,221,512 		JBrowse link
9+0 non-motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFAP96 cilia and flagella associated protein 96 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:45,175,351...45,208,647
Ensembl chr16:45,192,032...45,207,964 		JBrowse link
G DYNLL2 dynein light chain LC8-type 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:32,748,229...32,768,896
Ensembl chr 9:32,762,278...32,767,103 		JBrowse link
G ENKD1 enkurin domain containing 1 located_in ISO (PMID:29257953) MGI PMID:29257953 NCBI chr 5:81,783,887...81,787,244
Ensembl chr 5:81,784,109...81,787,243 		JBrowse link
G IFT80 intraflagellar transport 80 located_in
is_active_in		 IEA
ISO		 (PMID:26996322) Ensembl
MGI		 PMID:26996322 GO_REF:0000107 NCBI chr34:26,332,456...26,455,428 JBrowse link
G IFTAP intraflagellar transport associated protein located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:31,553,965...31,618,147
Ensembl chr18:31,556,023...31,618,123 		JBrowse link
G LOC119878397 phytanoyl-CoA dioxygenase, peroxisomal-like located_in IEA Ensembl GO_REF:0000107
G LOC478000 phytanoyl-CoA hydroxylase-like located_in ISO (PMID:29257953) GO_Central PMID:29257953 NCBI chr 2:23,185,901...23,206,719
Ensembl chr 2:23,185,782...23,253,497 		JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin located_in IEA Ensembl GO_REF:0000107 NCBI chr12:19,280,866...19,744,669
Ensembl chr12:19,286,822...19,744,141 		JBrowse link
G SMO smoothened, frizzled class receptor located_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G TTLL4 tubulin tyrosine ligase like 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,303,818...25,341,315
Ensembl chr37:25,273,110...25,340,512 		JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 located_in ISO (PMID:17499049) MGI PMID:17499049 NCBI chr 8:48,651,766...48,920,733
Ensembl chr 8:48,651,814...48,920,039 		JBrowse link
G TTLL6 tubulin tyrosine ligase like 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:24,993,135...25,039,616
Ensembl chr 9:24,999,126...25,033,525 		JBrowse link
G TTLL7 tubulin tyrosine ligase like 7 located_in ISO (PMID:17499049) MGI PMID:17499049 NCBI chr 6:63,773,635...63,927,084
Ensembl chr 6:63,784,088...63,922,661 		JBrowse link
G TULP3 TUB like protein 3 located_in ISO (PMID:20889716) MGI PMID:20889716 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097 		JBrowse link
cone photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 located_in ISO (PMID:10813773) MGI PMID:10813773 NCBI chr10:44,232,716...44,278,555
Ensembl chr10:44,234,004...44,260,746 		JBrowse link
G GUCA1A guanylate cyclase activator 1A located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:10,786,284...10,795,974
Ensembl chr12:10,788,424...10,795,442 		JBrowse link
G GUCA1B guanylate cyclase activator 1B located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:10,796,961...10,806,796
Ensembl chr12:10,797,921...10,834,237 		JBrowse link
G IFT140 intraflagellar transport 140 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,262,887...39,308,912
Ensembl chr 6:39,295,045...39,308,758 		JBrowse link
G OPN1SW opsin 1, short wave sensitive located_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,865,370...7,869,516
Ensembl chr14:7,865,561...7,868,745 		JBrowse link
G PCARE photoreceptor cilium actin regulator located_in IEA Ensembl GO_REF:0000107 NCBI chr17:22,898,998...22,910,639
Ensembl chr17:22,898,998...22,910,639 		JBrowse link
G PRKCA protein kinase C alpha located_in ISO (PMID:10813773) MGI PMID:10813773 NCBI chr 9:13,638,106...13,879,571
Ensembl chr 9:13,644,010...13,967,630 		JBrowse link
G RD3 RD3 regulator of GUCY2D located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:9,876,003...9,887,267 JBrowse link
G SLC24A4 solute carrier family 24 member 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:1,570,833...1,685,135
Ensembl chr 8:1,517,560...1,680,208 		JBrowse link
G TMEM237 transmembrane protein 237 located_in IEA Ensembl GO_REF:0000107 NCBI chr37:10,691,010...10,709,632
Ensembl chr37:10,691,743...10,709,606 		JBrowse link
kinociliary basal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC14A cell division cycle 14A located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,429,675...49,678,376
Ensembl chr 6:49,497,939...49,693,665 		JBrowse link
G IFT20 intraflagellar transport 20 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,581,117...42,587,830
Ensembl chr 9:42,581,433...42,587,804 		JBrowse link
G MKKS MKKS centrosomal shuttling protein located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr24:11,887,504...11,914,055
Ensembl chr24:11,898,236...11,913,740 		JBrowse link
kinocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC14A cell division cycle 14A located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,429,675...49,678,376
Ensembl chr 6:49,497,939...49,693,665 		JBrowse link
G CDH23 cadherin related 23 located_in ISO (PMID:15882574) MGI PMID:15882574 NCBI chr 4:22,206,972...22,570,875
Ensembl chr 4:22,207,001...22,571,131 		JBrowse link
G DCDC2 doublecortin domain containing 2 located_in
is_active_in		 ISO
IBA		 PMID:25601850 UniProt
GO_Central		 PMID:25601850 GO_REF:0000033 RGD:10412291 NCBI chr35:22,264,484...22,422,769
Ensembl chr35:22,266,282...22,422,776 		JBrowse link
G GRXCR1 glutaredoxin and cysteine rich domain containing 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:39,766,910...39,882,076
Ensembl chr13:39,766,919...39,882,086 		JBrowse link
G IFT88 intraflagellar transport 88 located_in ISO (PMID:18066062) MGI PMID:18066062 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266 		JBrowse link
G KNCN kinocilin located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:13,900,881...13,907,964
Ensembl chr15:13,903,036...13,907,967 		JBrowse link
G MAD2L1BP MAD2L1 binding protein located_in IEA UniProt GO_REF:0000044 NCBI chr12:12,085,825...12,089,907
Ensembl chr12:12,085,915...12,090,411 		JBrowse link
G RAC1 Rac family small GTPase 1 located_in ISO (PMID:23533177) MGI PMID:23533177 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G RSPH9 radial spoke head component 9 located_in IEA UniProt GO_REF:0000044 NCBI chr12:12,093,016...12,105,721
Ensembl chr12:12,096,568...12,105,721 		JBrowse link
G STRC stereocilin located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr30:10,444,726...10,459,058
Ensembl chr30:10,444,793...10,460,785 		JBrowse link
G TIAM1 TIAM Rac1 associated GEF 1 located_in ISO (PMID:23533177) MGI PMID:23533177 NCBI chr31:26,058,858...26,440,059
Ensembl chr31:25,932,697...26,202,756 		JBrowse link
non-motile cilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNGA2 cyclic nucleotide gated channel subunit alpha 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:119,695,898...119,702,791
Ensembl chr  X:119,695,898...119,702,446 		JBrowse link
G CNGA4 cyclic nucleotide gated channel subunit alpha 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,575,140...29,581,721
Ensembl chr21:29,575,578...29,580,616 		JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,574,552...58,641,631
Ensembl chr 2:58,574,552...58,640,812 		JBrowse link
photoreceptor cell cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFAP410 cilia and flagella associated protein 410 located_in IEA Ensembl GO_REF:0000107 NCBI chr31:38,183,181...38,192,739
Ensembl chr31:38,183,188...38,196,113 		JBrowse link
G FAM161A FAM161 centrosomal protein A located_in ISO (PMID:22791751) UniProt PMID:22791751 NCBI chr10:61,774,879...61,839,853
Ensembl chr10:61,814,693...61,839,777 		JBrowse link
G IFT52 intraflagellar transport 52 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:31,295,987...31,334,825
Ensembl chr24:31,296,015...31,334,808 		JBrowse link
G PEX6 peroxisomal biogenesis factor 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:11,503,184...11,514,977
Ensembl chr12:11,503,240...11,514,929 		JBrowse link
G RP1 RP1 axonemal microtubule associated located_in IEA Ensembl GO_REF:0000107 NCBI chr29:6,079,519...6,136,009
Ensembl chr29:6,079,377...6,136,009 		JBrowse link
G SDCCAG8 SHH signaling and ciliogenesis regulator SDCCAG8 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:34,395,977...34,631,479
Ensembl chr 7:34,396,345...34,631,462 		JBrowse link
G USH1G USH1 protein network component sans located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:5,527,935...5,532,940
Ensembl chr 9:5,528,492...5,533,900 		JBrowse link
photoreceptor connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRV1 adhesion G protein-coupled receptor V1 located_in ISO (PMID:17906286) MGI PMID:17906286 NCBI chr 3:17,866,459...18,351,532
Ensembl chr 3:17,866,808...18,351,532 		JBrowse link
G ALPK1 alpha kinase 1 located_in ISO (PMID:30967659) UniProt PMID:30967659 NCBI chr32:32,135,110...32,270,732
Ensembl chr32:32,136,738...32,267,264 		JBrowse link
G ARL3 ADP ribosylation factor like GTPase 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,152,762...15,189,043
Ensembl chr28:15,142,485...15,188,903 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G CEP290 centrosomal protein 290 located_in ISO (PMID:16632484), (PMID:16682973), (PMID:23943788) MGI PMID:16632484 PMID:16682973 PMID:23943788 NCBI chr15:29,194,449...29,281,351
Ensembl chr15:29,194,983...29,280,429 		JBrowse link
G CETN1 centrin 1 located_in ISO (PMID:15347651), (PMID:30120214) UniProt PMID:15347651 PMID:30120214 NCBI chr 7:67,431,020...67,431,774
Ensembl chr 7:67,431,081...67,431,599 		JBrowse link
G CETN2 centrin 2 located_in ISO (PMID:15347651) MGI PMID:15347651 NCBI chr  X:120,714,676...120,720,012 JBrowse link
G CETN3 centrin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:18,529,198...18,547,195
Ensembl chr 3:18,529,240...18,547,069 		JBrowse link
G CFAP410 cilia and flagella associated protein 410 located_in IEA Ensembl GO_REF:0000107 NCBI chr31:38,183,181...38,192,739
Ensembl chr31:38,183,188...38,196,113 		JBrowse link
G FAM161A FAM161 centrosomal protein A located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr10:61,774,879...61,839,853
Ensembl chr10:61,814,693...61,839,777 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,128,244...39,133,280
Ensembl chr20:39,128,244...39,133,280 		JBrowse link
G IFT122 intraflagellar transport 122 located_in ISO (PMID:19208653) UniProt PMID:19208653 NCBI chr20:5,644,002...5,716,702
Ensembl chr20:5,644,089...5,715,906 		JBrowse link
G IFT140 intraflagellar transport 140 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,262,887...39,308,912
Ensembl chr 6:39,295,045...39,308,758 		JBrowse link
G IFT20 intraflagellar transport 20 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,581,117...42,587,830
Ensembl chr 9:42,581,433...42,587,804 		JBrowse link
G IFT52 intraflagellar transport 52 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:31,295,987...31,334,825
Ensembl chr24:31,296,015...31,334,808 		JBrowse link
G IFT57 intraflagellar transport 57 located_in IEA Ensembl GO_REF:0000107 NCBI chr33:13,432,902...13,486,692
Ensembl chr33:13,410,544...13,486,612 		JBrowse link
G IFT88 intraflagellar transport 88 located_in ISO (PMID:19208653), (PMID:20368623) MGI PMID:19208653 PMID:20368623 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266 		JBrowse link
G IQCB1 IQ motif containing B1 located_in IEA Ensembl GO_REF:0000107 NCBI chr33:25,046,975...25,113,252
Ensembl chr33:25,047,172...25,112,652 		JBrowse link
G KIAA1549 KIAA1549 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,681,889...9,839,844
Ensembl chr16:9,696,913...9,834,548 		JBrowse link
G KIF17 kinesin family member 17 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,224,838...78,266,612
Ensembl chr 2:78,224,461...78,266,610 		JBrowse link
G KIF3A kinesin family member 3A located_in ISO (PMID:19208653) UniProt PMID:19208653 NCBI chr11:20,988,516...21,044,151
Ensembl chr11:20,928,655...21,044,090 		JBrowse link
G KIFAP3 kinesin associated protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:28,581,855...28,739,327
Ensembl chr 7:28,593,425...28,739,272 		JBrowse link
G LCA5 lebercilin LCA5 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:40,443,759...40,527,300
Ensembl chr12:40,444,617...40,527,292 		JBrowse link
G LOC487178 protocadherin beta-15 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:36,251,313...36,271,637 JBrowse link
G MAK male germ cell associated kinase located_in IEA Ensembl GO_REF:0000107 NCBI chr35:10,474,081...10,530,951
Ensembl chr35:10,475,179...10,525,089 		JBrowse link
G MYO7A myosin VIIA located_in IEA Ensembl GO_REF:0000107 NCBI chr21:21,539,735...21,624,063
Ensembl chr21:21,539,785...21,624,279 		JBrowse link
G NPHP1 nephrocystin 1 located_in ISO (PMID:16885411) UniProt PMID:16885411 NCBI chr17:35,076,527...35,136,674
Ensembl chr17:35,076,636...35,136,425 		JBrowse link
G NPHP4 nephrocystin 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:59,819,236...59,936,220
Ensembl chr 5:59,814,274...59,929,386 		JBrowse link
G POC5 POC5 centriolar protein is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 3:30,708,451...30,745,754
Ensembl chr 3:30,709,101...30,745,550 		JBrowse link
G RP1 RP1 axonemal microtubule associated located_in IEA Ensembl GO_REF:0000107 NCBI chr29:6,079,519...6,136,009
Ensembl chr29:6,079,377...6,136,009 		JBrowse link
G RP1L1 RP1 like 1 located_in ISO (PMID:19657028) UniProt PMID:19657028 NCBI chr25:27,317,102...27,332,075
Ensembl chr25:27,325,658...27,330,556 		JBrowse link
G RPGR retinitis pigmentosa GTPase regulator located_in ISO (PMID:10725384) MGI PMID:10725384 NCBI chr  X:33,056,371...33,105,036
Ensembl chr  X:32,745,020...33,330,841 		JBrowse link
G RPGRIP1 RPGR interacting protein 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:18,316,887...18,388,724
Ensembl chr15:18,316,887...18,387,735 		JBrowse link
G RPGRIP1L RPGRIP1 like is_active_in ISO
IBA		 RGD
GO_Central		 PMID:17558407 GO_REF:0000033 RGD:11537356 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284 		JBrowse link
G SEPTIN2 septin 2 located_in ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chr25:51,296,486...51,330,508
Ensembl chr25:51,296,554...51,328,616 		JBrowse link
G SPATA7 spermatogenesis associated 7 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:59,658,295...59,697,409
Ensembl chr 8:59,658,365...59,697,318 		JBrowse link
G SPTBN5 spectrin beta, non-erythrocytic 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,877,155...8,922,749
Ensembl chr30:8,879,625...8,923,165 		JBrowse link
G TBCC tubulin folding cofactor C located_in IEA Ensembl GO_REF:0000107 NCBI chr12:11,332,736...11,334,799
Ensembl chr12:11,333,676...11,334,842 		JBrowse link
G TMEM237 transmembrane protein 237 located_in IEA Ensembl GO_REF:0000107 NCBI chr37:10,691,010...10,709,632
Ensembl chr37:10,691,743...10,709,606 		JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr11:49,809,156...49,821,224
Ensembl chr11:49,809,465...49,821,075 		JBrowse link
G TSGA10IP testis specific 10 interacting protein is_active_in IBA GO_Central GO_REF:0000033 NCBI chr18:51,315,150...51,323,769
Ensembl chr18:51,314,177...51,323,718 		JBrowse link
G TTC8 tetratricopeptide repeat domain 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:60,061,670...60,115,464
Ensembl chr 8:60,061,732...60,115,075 		JBrowse link
G USH1G USH1 protein network component sans located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:5,527,935...5,532,940
Ensembl chr 9:5,528,492...5,533,900 		JBrowse link
G USH2A usherin located_in IEA Ensembl GO_REF:0000107 NCBI chr38:11,063,221...11,750,444
Ensembl chr38:11,063,817...11,750,444 		JBrowse link
G WDR19 WD repeat domain 19 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:73,115,560...73,213,823
Ensembl chr 3:73,137,250...73,221,512 		JBrowse link
G WHRN whirlin located_in IEA Ensembl GO_REF:0000107 NCBI chr11:68,617,383...68,699,824
Ensembl chr11:68,617,377...68,699,977 		JBrowse link
photoreceptor disc membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHO rhodopsin located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:5,630,735...5,638,906 JBrowse link
G SPTBN5 spectrin beta, non-erythrocytic 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,877,155...8,922,749
Ensembl chr30:8,879,625...8,923,165 		JBrowse link
photoreceptor distal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 located_in ISO (PMID:29899041) MGI PMID:29899041 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351 		JBrowse link
G CEP290 centrosomal protein 290 located_in ISO (PMID:29899041) MGI PMID:29899041 NCBI chr15:29,194,449...29,281,351
Ensembl chr15:29,194,983...29,280,429 		JBrowse link
G NPHP1 nephrocystin 1 located_in ISO (PMID:29899041) MGI PMID:29899041 NCBI chr17:35,076,527...35,136,674
Ensembl chr17:35,076,636...35,136,425 		JBrowse link
G NPHP4 nephrocystin 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:59,819,236...59,936,220
Ensembl chr 5:59,814,274...59,929,386 		JBrowse link
G RPGR retinitis pigmentosa GTPase regulator located_in ISO (PMID:29899041) MGI PMID:29899041 NCBI chr  X:33,056,371...33,105,036
Ensembl chr  X:32,745,020...33,330,841 		JBrowse link
G RPGRIP1 RPGR interacting protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:18,316,887...18,388,724
Ensembl chr15:18,316,887...18,387,735 		JBrowse link
G SPATA7 spermatogenesis associated 7 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:59,658,295...59,697,409
Ensembl chr 8:59,658,365...59,697,318 		JBrowse link
photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:55,058,361...55,186,255
Ensembl chr 6:55,058,361...55,186,253 		JBrowse link
G AHI1 Abelson helper integration site 1 located_in ISO (PMID:20592197) MGI PMID:20592197 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351 		JBrowse link
G ARR3 arrestin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:54,725,034...54,730,920
Ensembl chr  X:54,718,323...54,730,852 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G BBS7 Bardet-Biedl syndrome 7 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,280,487...18,319,128
Ensembl chr19:18,280,520...18,315,825 		JBrowse link
G BSG basigin located_in ISO (PMID:25957687) UniProt PMID:25957687 NCBI chr20:57,942,703...57,951,089
Ensembl chr20:57,943,276...57,951,061 		JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F ISO RGD PMID:11526344 RGD:632484 NCBI chr  X:42,302,971...42,327,787
Ensembl chr  X:42,303,158...42,326,774 		JBrowse link
G CCDC66 coiled-coil domain containing 66 located_in IEA UniProt GO_REF:0000044 NCBI chr20:33,714,224...33,758,846
Ensembl chr20:33,714,224...33,758,799 		JBrowse link
G CEP250 centrosomal protein 250 located_in ISO (PMID:28005958) UniProt PMID:28005958 NCBI chr24:24,411,882...24,461,916
Ensembl chr24:24,418,859...24,461,640 		JBrowse link
G CEP290 centrosomal protein 290 located_in ISO (PMID:23943788) MGI PMID:23943788 NCBI chr15:29,194,449...29,281,351
Ensembl chr15:29,194,983...29,280,429 		JBrowse link
G CERKL ceramide kinase like located_in IEA Ensembl GO_REF:0000107 NCBI chr36:24,708,109...24,839,240
Ensembl chr36:24,710,035...24,859,028 		JBrowse link
G CFAP410 cilia and flagella associated protein 410 located_in IEA Ensembl GO_REF:0000107 NCBI chr31:38,183,181...38,192,739
Ensembl chr31:38,183,188...38,196,113 		JBrowse link
G CIB2 calcium and integrin binding family member 2 located_in IEA UniProt GO_REF:0000044
G CNGA1 cyclic nucleotide gated channel subunit alpha 1 located_in ISO (PMID:10725384), (PMID:15634774), (PMID:20592197) MGI PMID:10725384 PMID:15634774 PMID:20592197 NCBI chr13:43,831,159...43,864,276
Ensembl chr13:43,831,163...43,864,276 		JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 located_in ISO (PMID:15634774) MGI PMID:15634774 NCBI chr10:44,232,716...44,278,555
Ensembl chr10:44,234,004...44,260,746 		JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:58,574,552...58,641,631
Ensembl chr 2:58,574,552...58,640,812 		JBrowse link
G CNGB3 cyclic nucleotide gated channel subunit beta 3 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr29:32,744,946...32,992,715
Ensembl chr29:32,749,389...32,893,077 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,277,394...5,490,542
Ensembl chr 7:5,277,394...5,490,470 		JBrowse link
G GNAQ G protein subunit alpha q located_in ISS AgBase GO_REF:0000024 NCBI chr 1:80,733,530...80,928,065
Ensembl chr 1:80,715,366...80,928,065 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 located_in ISO
IEA
ISS		 RGD
Ensembl
UniProt		 PMID:10396627 PMID:11931744 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 RGD:1599009 RGD:6893629 NCBI chr20:39,128,244...39,133,280
Ensembl chr20:39,128,244...39,133,280 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 is_active_in
located_in		 ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:17591908 GO_REF:0000033 GO_REF:0000107 RGD:2302146 NCBI chr 6:42,259,404...42,271,197
Ensembl chr 6:42,259,702...42,268,082 		JBrowse link
G GNB1 G protein subunit beta 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,777,854...56,879,619
Ensembl chr 5:56,779,354...56,817,295 		JBrowse link
G GNGT1 G protein subunit gamma transducin 1 ISO RGD PMID:10396627 PMID:11931744 RGD:1599009 RGD:6893629 NCBI chr14:19,081,676...19,420,261
Ensembl chr14:19,415,510...19,420,255 		JBrowse link
G GRK1 G protein-coupled receptor kinase 1 located_in ISO (PMID:22183407) MGI PMID:22183407 NCBI chr22:60,911,953...60,929,330
Ensembl chr22:60,911,953...60,926,146 		JBrowse link
G GUCA1A guanylate cyclase activator 1A located_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,786,284...10,795,974
Ensembl chr12:10,788,424...10,795,442 		JBrowse link
G GUCA1B guanylate cyclase activator 1B located_in ISO (PMID:22183407) RGD
MGI		 PMID:9620085 PMID:22183407 RGD:1599354 NCBI chr12:10,796,961...10,806,796
Ensembl chr12:10,797,921...10,834,237 		JBrowse link
G GUCY2D guanylate cyclase 2D, retinal located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:32,844,033...32,859,263
Ensembl chr 5:32,844,033...32,857,687 		JBrowse link
G HNF1A HNF1 homeobox A located_in IEA Ensembl GO_REF:0000107 NCBI chr26:16,805,690...16,826,065
Ensembl chr26:16,805,690...16,824,790 		JBrowse link
G IFT20 intraflagellar transport 20 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,581,117...42,587,830
Ensembl chr 9:42,581,433...42,587,804 		JBrowse link
G IMPG1 interphotoreceptor matrix proteoglycan 1 located_in IEA UniProt GO_REF:0000044 NCBI chr12:37,506,511...37,614,683
Ensembl chr12:37,507,525...37,638,250 		JBrowse link
G IMPG2 interphotoreceptor matrix proteoglycan 2 located_in IEA UniProt GO_REF:0000044 NCBI chr33:7,706,069...7,785,817
Ensembl chr33:7,709,683...7,785,309 		JBrowse link
G INHA inhibin subunit alpha ISO RGD PMID:7596220 RGD:2290440 NCBI chr37:26,080,465...26,083,570
Ensembl chr37:26,080,510...26,083,391 		JBrowse link
G IQCB1 IQ motif containing B1 located_in IEA Ensembl GO_REF:0000107 NCBI chr33:25,046,975...25,113,252
Ensembl chr33:25,047,172...25,112,652 		JBrowse link
G KIF17 kinesin family member 17 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,224,838...78,266,612
Ensembl chr 2:78,224,461...78,266,610 		JBrowse link
G KIFAP3 kinesin associated protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:28,581,855...28,739,327
Ensembl chr 7:28,593,425...28,739,272 		JBrowse link
G LYAR Ly1 antibody reactive located_in ISO (PMID:25735755) UniProt PMID:25735755 NCBI chr 3:69,710,735...69,724,175
Ensembl chr 3:69,710,735...69,724,177 		JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 located_in ISO (PMID:24608321) UniProt PMID:24608321 NCBI chr18:17,973,058...19,098,785
Ensembl chr18:17,918,928...18,930,059 		JBrowse link
G MAK male germ cell associated kinase located_in IEA Ensembl GO_REF:0000107 NCBI chr35:10,474,081...10,530,951
Ensembl chr35:10,475,179...10,525,089 		JBrowse link
G MAP1A microtubule associated protein 1A located_in ISO (PMID:24664738) MGI PMID:24664738 NCBI chr30:10,361,871...10,382,780
Ensembl chr30:10,361,909...10,381,376 		JBrowse link
G MAP1B microtubule associated protein 1B located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:55,175,000...55,258,160
Ensembl chr 2:55,174,837...55,253,975 		JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase ISO RGD PMID:11861639 RGD:1299193 NCBI chr17:36,336,787...36,445,796
Ensembl chr17:36,336,861...36,445,380 		JBrowse link
G MYO3B myosin IIIB located_in ISO (PMID:19332056) MGI PMID:19332056 NCBI chr36:14,804,662...15,229,597
Ensembl chr36:14,803,514...15,209,820 		JBrowse link
G MYO5A myosin VA located_in ISO (PMID:14978221) MGI PMID:14978221 NCBI chr30:17,990,521...18,122,160
Ensembl chr30:17,888,419...18,213,061 		JBrowse link
G MYO7A myosin VIIA located_in
NOT|located_in		 IEA
ISO		 (PMID:8842737) Ensembl
UniProt		 PMID:8842737 GO_REF:0000107 NCBI chr21:21,539,735...21,624,063
Ensembl chr21:21,539,785...21,624,279 		JBrowse link
G MYRIP myosin VIIA and Rab interacting protein located_in ISO (PMID:11964381) UniProt PMID:11964381 NCBI chr23:9,448,564...9,765,328
Ensembl chr23:9,448,559...9,763,182 		JBrowse link
G NUP42 nucleoporin 42 located_in ISO (PMID:22183407) MGI PMID:22183407 NCBI chr14:36,865,737...36,887,682
Ensembl chr14:36,802,984...36,887,588 		JBrowse link
G OCRL OCRL inositol polyphosphate-5-phosphatase located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:100,760,302...100,817,673
Ensembl chr  X:100,757,373...100,831,500 		JBrowse link
G OPN1LW opsin 1, medium wave sensitive is_active_in IBA GO_Central GO_REF:0000033 NCBI chr  X:121,974,552...121,987,418
Ensembl chr  X:121,974,552...121,987,418 		JBrowse link
G OPN1SW opsin 1, short wave sensitive is_active_in
located_in		 ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:20209167 GO_REF:0000033 GO_REF:0000107 RGD:6893562 NCBI chr14:7,865,370...7,869,516
Ensembl chr14:7,865,561...7,868,745 		JBrowse link
G OPN3 opsin 3 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 7:32,995,047...33,040,873
Ensembl chr 7:32,996,938...33,040,876 		JBrowse link
G OPN5 opsin 5 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr12:15,831,311...15,858,121
Ensembl chr12:15,831,311...15,877,721 		JBrowse link
G PCARE photoreceptor cilium actin regulator is_active_in IBA GO_Central GO_REF:0000033 NCBI chr17:22,898,998...22,910,639
Ensembl chr17:22,898,998...22,910,639 		JBrowse link
G PCDH15 protocadherin related 15 located_in ISO (PMID:14570705) HGNC-UCL
MGI		 PMID:14570705 NCBI chr26:33,426,728...34,589,208
Ensembl chr26:33,719,839...34,588,017 		JBrowse link
G PDC phosducin located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr 7:19,498,785...19,514,225
Ensembl chr 7:19,498,788...19,514,228 		JBrowse link
G PDE6A phosphodiesterase 6A located_in IEA UniProt GO_REF:0000044 NCBI chr 4:59,103,965...59,163,857
Ensembl chr 4:59,103,945...59,163,857 		JBrowse link
G PDE6B phosphodiesterase 6B located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chr 3:91,746,571...91,775,372
Ensembl chr 3:91,746,571...91,775,372 		JBrowse link
G PRCD photoreceptor disc component located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 NCBI chr 9:4,179,757...4,190,658
Ensembl chr 9:4,185,466...4,188,777 		JBrowse link
G PROM1 prominin 1 located_in ISO (PMID:19228982) UniProt PMID:19228982 NCBI chr 3:64,229,487...64,362,346
Ensembl chr 3:64,260,685...64,382,009 		JBrowse link
G PRPH peripherin located_in ISO (PMID:22183407) MGI PMID:22183407 NCBI chr27:5,314,815...5,320,270
Ensembl chr27:5,314,807...5,320,089 		JBrowse link
G PRPH2 peripherin 2 located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chr12:11,299,236...11,316,175
Ensembl chr12:11,299,236...11,316,175 		JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:60,195,118...60,216,847
Ensembl chr 9:60,195,124...60,216,819 		JBrowse link
G PTPRK protein tyrosine phosphatase receptor type K located_in ISO (PMID:18308476) MGI PMID:18308476 NCBI chr 1:66,596,659...67,022,631
Ensembl chr 1:66,597,563...67,124,540 		JBrowse link
G RAB27A RAB27A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr30:20,633,576...20,706,240
Ensembl chr30:20,635,400...20,690,521 		JBrowse link
G RAPGEF4 Rap guanine nucleotide exchange factor 4 ISO RGD PMID:19883736 RGD:2314691 NCBI chr36:17,087,488...17,323,504
Ensembl chr36:17,087,488...17,323,220 		JBrowse link
G RCVRN recoverin located_in IEA UniProt GO_REF:0000044 NCBI chr 5:34,323,580...34,330,667
Ensembl chr 5:34,323,576...34,330,667 		JBrowse link
G RD3 RD3 regulator of GUCY2D located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:9,876,003...9,887,267 JBrowse link
G RHO rhodopsin is_active_in
located_in		 ISO
IBA
IEA		 RGD
GO_Central
Ensembl
UniProt		 PMID:8814134 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 RGD:6893595 NCBI chr20:5,630,735...5,638,906 JBrowse link
G ROM1 retinal outer segment membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,025,603...54,027,803
Ensembl chr18:54,025,606...54,027,375 		JBrowse link
G RP1 RP1 axonemal microtubule associated located_in IEA
ISS		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr29:6,079,519...6,136,009
Ensembl chr29:6,079,377...6,136,009 		JBrowse link
G RP1L1 RP1 like 1 located_in ISO (PMID:19657028) UniProt PMID:19657028 NCBI chr25:27,317,102...27,332,075
Ensembl chr25:27,325,658...27,330,556 		JBrowse link
G RPGR retinitis pigmentosa GTPase regulator located_in ISO (PMID:12140192) UniProt PMID:12140192 NCBI chr  X:33,056,371...33,105,036
Ensembl chr  X:32,745,020...33,330,841 		JBrowse link
G SAG S-antigen visual arrestin is_active_in
located_in		 ISO
IBA
IEA
ISS		 RGD
GO_Central
UniProt
Ensembl		 PMID:10396627 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 RGD:6893629 NCBI chr25:44,800,141...44,843,580
Ensembl chr25:44,812,362...44,843,579 		JBrowse link
G SHANK2 SH3 and multiple ankyrin repeat domains 2 located_in ISO (PMID:19299912) BHF-UCL PMID:19299912 NCBI chr18:47,477,625...47,915,557
Ensembl chr18:47,635,788...47,912,117 		JBrowse link
G STX3 syntaxin 3 located_in ISO (PMID:33974130) UniProt PMID:33974130 NCBI chr21:50,298,040...50,322,773
Ensembl chr21:50,298,158...50,318,663 		JBrowse link
G TULP1 TUB like protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,632,580...4,644,313
Ensembl chr12:4,633,098...4,645,994 		JBrowse link
G USH1C USH1 protein network component harmonin located_in ISO (PMID:14578428), (PMID:17906286) RGD
MGI		 PMID:14578428 PMID:17906286 RGD:1303964 NCBI chr21:40,055,786...40,100,685
Ensembl chr21:40,055,730...40,101,430 		JBrowse link
G VCAN versican located_in IEA UniProt GO_REF:0000044 NCBI chr 3:24,127,293...24,238,859
Ensembl chr 3:24,119,181...24,239,192 		JBrowse link
photoreceptor outer segment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDHR1 cadherin related family member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:32,435,364...32,459,181
Ensembl chr 4:32,439,148...32,459,192 		JBrowse link
G CNGA1 cyclic nucleotide gated channel subunit alpha 1 located_in ISO (PMID:18654668) BHF-UCL PMID:18654668 NCBI chr13:43,831,159...43,864,276
Ensembl chr13:43,831,163...43,864,276 		JBrowse link
G GNB1 G protein subunit beta 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chr 5:56,777,854...56,879,619
Ensembl chr 5:56,779,354...56,817,295 		JBrowse link
G GUCY2D guanylate cyclase 2D, retinal located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,844,033...32,859,263
Ensembl chr 5:32,844,033...32,857,687 		JBrowse link
G PDE6A phosphodiesterase 6A is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 4:59,103,965...59,163,857
Ensembl chr 4:59,103,945...59,163,857 		JBrowse link
G PDE6B phosphodiesterase 6B is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 3:91,746,571...91,775,372
Ensembl chr 3:91,746,571...91,775,372 		JBrowse link
G PDE6G phosphodiesterase 6G is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 9:525,123...529,406
Ensembl chr 9:526,577...529,526 		JBrowse link
G PDE6H phosphodiesterase 6H is_active_in IBA GO_Central GO_REF:0000033 NCBI chr27:31,640,731...31,664,494
Ensembl chr27:31,640,737...31,664,401 		JBrowse link
G PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 ISO RGD PMID:20089132 RGD:5131540 NCBI chr 5:77,428,587...77,506,126
Ensembl chr 5:77,432,517...77,565,801 		JBrowse link
G PRCD photoreceptor disc component located_in
is_active_in		 IEA
IBA		 InterPro
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:4,179,757...4,190,658
Ensembl chr 9:4,185,466...4,188,777 		JBrowse link
G PROM1 prominin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:64,229,487...64,362,346
Ensembl chr 3:64,260,685...64,382,009 		JBrowse link
G PRPH peripherin located_in ISO (PMID:10414956) MGI PMID:10414956 NCBI chr27:5,314,815...5,320,270
Ensembl chr27:5,314,807...5,320,089 		JBrowse link
G RDH11 retinol dehydrogenase 11 NOT|located_in ISO (PMID:15790565) MGI PMID:15790565 NCBI chr 8:41,651,970...41,669,661
Ensembl chr 8:41,614,921...41,669,576 		JBrowse link
G RHO rhodopsin located_in ISO
IEA
ISS		 RGD
Ensembl
UniProt		 PMID:2209754 GO_REF:0000024 GO_REF:0000107 RGD:6893561 NCBI chr20:5,630,735...5,638,906 JBrowse link
G ROM1 retinal outer segment membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,025,603...54,027,803
Ensembl chr18:54,025,606...54,027,375 		JBrowse link
photoreceptor proximal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP290 centrosomal protein 290 located_in ISO (PMID:29899041) MGI PMID:29899041 NCBI chr15:29,194,449...29,281,351
Ensembl chr15:29,194,983...29,280,429 		JBrowse link
rod photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP290 centrosomal protein 290 is_active_in ISO (PMID:29899041) MGI PMID:29899041 NCBI chr15:29,194,449...29,281,351
Ensembl chr15:29,194,983...29,280,429 		JBrowse link
G CNGA1 cyclic nucleotide gated channel subunit alpha 1 located_in ISS UniProt GO_REF:0000024 NCBI chr13:43,831,159...43,864,276
Ensembl chr13:43,831,163...43,864,276 		JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,574,552...58,641,631
Ensembl chr 2:58,574,552...58,640,812 		JBrowse link
G GUCY2F guanylate cyclase 2F, retinal located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:82,648,673...82,751,394
Ensembl chr  X:82,649,601...82,751,394 		JBrowse link
G RD3 RD3 regulator of GUCY2D located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:9,876,003...9,887,267 JBrowse link
G RGS9BP regulator of G protein signaling 9 binding protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:119,316,799...119,322,856
Ensembl chr 1:119,321,909...119,322,625 		JBrowse link
G RHO rhodopsin located_in IEA Ensembl GO_REF:0000107 NCBI chr20:5,630,735...5,638,906 JBrowse link
G SPATA7 spermatogenesis associated 7 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:59,658,295...59,697,409
Ensembl chr 8:59,658,365...59,697,318 		JBrowse link
G TMEM237 transmembrane protein 237 located_in IEA Ensembl GO_REF:0000107 NCBI chr37:10,691,010...10,709,632
Ensembl chr37:10,691,743...10,709,606 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23074
    cellular anatomical structure 22784
      cell projection 2681
        plasma membrane bounded cell projection 2607
          cilium 983
            non-motile cilium 177
              9+0 non-motile cilium + 135
              9+2 non-motile cilium + 13
              non-motile cilium membrane 3
paths to the root