TULP3 (TUB like protein 3) - Rat Genome Database

Name: TULP3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: TULP3 (TUB like protein 3) Canis lupus familiaris

Analyze

Symbol:

TULP3

Name:

TUB like protein 3

RGD ID:

12286658

Description:

ENCODES a protein that exhibits enzyme binding (ortholog); G protein-coupled receptor binding (ortholog); intraciliary transport particle A binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); brain development (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); HEPATORENOCARDIAC DEGENERATIVE FIBROSIS (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axoneme (ortholog); ciliary base (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tubby like protein 3; tubby-related protein 3

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TULP3 (TUB like protein 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Tulp3 (TUB like protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tulp3 (TUB like protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tulp3 (TUB like protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TULP3 (TUB like protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tulp3 (TUB like protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TULP3 (TUB like protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TULP3 (TUB like protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tulp3 (TUB like protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	41,819,574 - 41,884,198 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	41,819,455 - 41,884,097 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	4,800,052 - 4,863,659 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	42,177,179 - 42,187,473 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	42,177,072 - 42,187,473 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	42,119,743 - 42,183,867 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	42,089,002 - 42,153,483 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	4,159,786 - 4,223,607 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

HEPATORENOCARDIAC DEGENERATIVE FIBROSIS (ISO)

Hyperphosphatemic Familial Tumoral Calcinosis 1 (ISO)

polycystic kidney disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

anterior/posterior pattern specification (ISO)

bone development (ISO)

brain development (ISO)

bronchus morphogenesis (ISO)

central nervous system neuron differentiation (ISO)

dorsal/ventral neural tube patterning (ISO)

embryonic camera-type eye development (ISO)

embryonic digit morphogenesis (ISO)

embryonic neurocranium morphogenesis (ISO)

ganglion development (ISO)

limb development (ISO)

negative regulation of smoothened signaling pathway (ISO)

neural tube closure (ISO)

neural tube development (ISO)

neural tube formation (ISO)

protein localization to cilium (IEA,ISO)

regulation of G protein-coupled receptor signaling pathway (ISO)

regulation of smoothened signaling pathway (ISO)

smoothened signaling pathway (ISO)

smoothened signaling pathway involved in dorsal/ventral neural tube patterning (ISO)

Cellular Component

9+0 non-motile cilium (ISO)

axoneme (ISO)

ciliary base (ISO)

cilium (IEA)

extracellular region (IEA)

nucleolus (ISO)

nucleoplasm (ISO)

nucleus (ISO)

plasma membrane (ISO)

Molecular Function

enzyme binding (ISO)

G protein-coupled receptor binding (ISO)

intraciliary transport particle A binding (ISO)

phosphatidylinositol binding (ISO)

protein binding (ISO)

protein-containing complex binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

TULP3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	41,819,574 - 41,884,198 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	41,819,455 - 41,884,097 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	4,800,052 - 4,863,659 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	42,177,179 - 42,187,473 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	42,177,072 - 42,187,473 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	42,119,743 - 42,183,867 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	42,089,002 - 42,153,483 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	4,159,786 - 4,223,607 (+)	NCBI		UU_Cfam_GSD_1.0

TULP3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	2,890,891 - 2,941,138 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	2,877,223 - 2,941,138 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	3,000,057 - 3,050,304 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	2,870,294 - 2,920,565 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	2,870,293 - 2,920,560	NCBI
Celera	12	4,613,921 - 4,664,219 (+)	NCBI		Celera
Cytogenetic Map	12	p13.33	NCBI
HuRef	12	2,857,195 - 2,907,548 (+)	NCBI		HuRef
CHM1_1	12	2,999,274 - 3,049,461 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	2,896,833 - 2,947,229 (+)	NCBI		T2T-CHM13v2.0

Tulp3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	128,298,103 - 128,332,833 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	128,298,124 - 128,332,814 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	128,321,140 - 128,355,873 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	128,321,161 - 128,355,851 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	128,271,179 - 128,305,869 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	128,286,785 - 128,321,413 (-)	NCBI		MGSCv36	mm8
Celera	6	129,998,892 - 130,032,998 (-)	NCBI		Celera
Cytogenetic Map	6	F3	NCBI
cM Map	6	62.96	NCBI

Tulp3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	163,276,583 - 163,318,297 (-)	NCBI		GRCr8
mRatBN7.2	4	161,590,478 - 161,632,244 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	161,590,479 - 161,632,149 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	167,820,095 - 167,861,745 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	163,603,028 - 163,644,680 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	162,237,071 - 162,278,723 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	161,636,084 - 161,677,807 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	161,637,892 - 161,658,519 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	226,842,356 - 226,883,821 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	165,334,192 - 165,376,105 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	150,292,748 - 150,333,802 (-)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

Tulp3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	18,453,311 - 18,482,400 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	18,424,912 - 18,484,522 (+)	NCBI	ChiLan1.0	ChiLan1.0

TULP3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	8,442,587 - 8,492,048 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	8,439,144 - 8,488,811 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	3,012,890 - 3,061,831 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	2,944,769 - 2,993,287 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	2,944,769 - 2,993,278 (+)	Ensembl	panpan1.1		panPan2

Tulp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	105,905,742 - 105,975,003 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936606	3,209,141 - 3,278,563 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936606	3,209,170 - 3,278,809 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TULP3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	67,199,448 - 67,238,322 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	67,201,680 - 67,238,348 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	69,488,555 - 69,525,210 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TULP3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	2,956,762 - 3,005,309 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	2,956,895 - 3,006,735 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	5,296,513 - 5,359,976 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tulp3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624860	232,936 - 299,225 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624860	232,838 - 301,299 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TULP3
587 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			14	1		1	6		6		8
Low	5	5	8	5	6	5		6	6	8	2	6
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005637291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014108597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022411530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022411531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038439595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038459675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038459676	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038513976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038576440	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038576441	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038576442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038576443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038576444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038576445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038576446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038641822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038641823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038641824	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038641825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038641826	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038641827	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038641828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_849551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000289	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000024749 ⟹ ENSCAFP00000022958

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	27	41,819,455 - 41,884,097 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000070820 ⟹ ENSCAFP00000048129

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	27	41,820,382 - 41,870,295 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845043659 ⟹ ENSCAFP00845034205

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	27	42,177,072 - 42,187,473 (-)	Ensembl

RefSeq Acc Id:

XM_005637291 ⟹ XP_005637348

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	27	41,819,574 - 41,884,198 (-)	NCBI
Dog10K_Boxer_Tasha	27	4,800,052 - 4,863,659 (+)	NCBI

Sequence:

show sequence

TGCGGTTGCCAGGGGGCGGGGCCACGCCGCCAGTCCGGCTCGCCCCCCGAGCGGCGGCCTCGGG
GCTTCTGGCCTCGGTAGCCACTTCCTGAGCCGCGGGGATGGAGGCGTCGCGCTGCCGGCTCGGA
CCCCGCGGGGACAGTGCCTTTGAAGATGAGACCATGAAACTTCGACAGCTGAAACTAGATAATC
AGAGAGCCCTGCTGGAGAAGAAGCAGAGAAAAAAGCGCCTTGAGCCGCTCATGGTACAACCAAA
TCCAGAAGCCAGGCTACGTCGATCAAAGCCAAGAGGCATTGATGGTCCAGCTGCCTTCTTGAAG
CCAGATGCTCAAGATTTGGAAACCAAACTTCATGTTGTCTCAGTAGACTCTTCTGCTGTGGAAG
AGGATACCGAAGGAAGTGTTGATGGAGAAGGCACTTTGGATACTGTGTCCAAGCCAGATCTCCA
GGAGATTCTCCAAAAACATGGTATCTCAGGTAGTTTGAACTTTGATGAAGAGGAGACCGATGGG
GAGGAAGAAGGAAAAAAACTATGTCATTCACCATATTCAGTGGCAGAGAGACCCAATTCTGCTT
CTAGCCAGAAATCAACCACAGATACAGGAGCTTCTGGTTCTGCATCCCAACAAACTGATAACCA
GCTGGGAGAAGTGGAGAATTTAGAGGACTTTGCATATAGTCCTGCCCCTCGGGGTATTACAGTA
AAGTGTCGGATAACCAGGGATAAAAAAGGAATGGACAGGGGTCTCTTCCCCACTTACTATATGC
ACTTGGAAAAGGATGAAAATCGGAAGATATTTCTTCTTGCGGGTAGAAAGCGGAAAAAGAGCAA
AACTTCTAACTACCTTATTTCCACTGATCCAACAGATTTATCTCGTGAAGGGGAAAGTTATATT
GGCAAGCTCAGATCCAACCTCATGGGGACCAAGTTTACAGTTTATGACCATGGTGTCAGCCCAA
CCAAGGCCCAAGGCCTGGTAGAAAAGGCCTATGTCCGGCAGGAGTTGGCAGCCATCTGTTACGA
AACAAATGTACTTGGATTTAAAGGTCCTAGGAAAATGTCTGTGATCATTCCAGGGATGAATATG
AATCACGAACGGATCCCATTTCAGCCACGAAATGACCACGAGAGCTTGCTTTCCAAATGGCAAA
ACAAAACCATGGAGAACTTGATTGAACTGCACAACAAGGCCCCGGTCTGGAATGATGACACACA
GTCCTATGTCCTGAACTTCCATGGCCGGGTCACTCAGGCATCTGTGAAGAACTTTCAGATAGTC
CATGACAATGACCCTGACTACATAGTCATGCAGTTTGGACGTGTGGCAGACGATGTGTTCACCC
TGGACTACAACTACCCGCTGTGTGCACTTCAGGCCTTTGCCATTGGCCTTTCTAGCTTTGACAG
CAAGCTAGCCTGTGAATGAGGGAAACAGCCGGCGCCGAACTTTCTCACTCAGAGCTTTCAGAAG
CCAATAATTGCCTCCTTTGCTTTTGCCCCAGGACATGAAGAGCGATAGGCTGCCCCTTTGGGAG
TCATCCCTGAATGTATGTATATGTGTCTATACACATGTGCGTGTTTACACATATGCCTATGTGT
AAACACACACATATGTACACACACACTCAACTTCTCTGGGTTTTACAGACCCGGACAATGATCA
CAGCTTAACATGGGTGAGAGGCTGTTCACAGCACAGGGGTTCTTGTCCAGAGCACATTGGTAAC
TCCTGAGGCTGTTGCCCCACAGATTCGGACCTTGAGAGCCAGATTTTCTATGCTTGGAGACGTG
CAGCTAGAATCAGGTCTAATGATTAAATACTTGGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTG
AAGACCTTTCCAGAGTGGGACAGTTCCCTAAATTGCCTTTAGTCTTCAGGTCTGCACATTTTTT
CCATAAATGGCCAGAGAGTCCTTCACAGCTGCTAAGCTTTGTTGTATTACAAGCACAGCCATGG
CCAGTTCATAAACCAGTGAGTGTGGCTGTGTCCCACTAGAATGTTATTTACAAAAAACAGGCAG
CAGGCCAGATTTGGCCTGGGGACTGGGTTGCTGGCCCCTGCTCCAGATATATTTCTTTACGCTA
TGGGCCTCTCAGCATCTTCCAGAATGGGCCTGTGGTCATGATGTCATATGAGTGGGAAATGGAC
AACTCTAGGAAGCAACAGTCCCACGGACTGGATCTAAAAAGGTACTCAGCTCCATCCACATAGC
TTTTACCTTATTTTTTAAAATTTATTTTTATTATTTTTTTTAAAGTATGCTTTACGGGCAGCCC
GGGTGGCTCAGCGGTTTAGCGCCGCCTTCAGCCCAGGGCCTGATCCTGGAGT

hide sequence

RefSeq Acc Id:

XM_014108597 ⟹ XP_013964072

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	27	41,819,575 - 41,844,703 (-)	NCBI
Dog10K_Boxer_Tasha	27	4,839,113 - 4,863,659 (+)	NCBI

Sequence:

show sequence

TTTATTGTTAAATAACATTCTGAGTTGTGGCTACACCATGTTTCGTTATCCATTCATCAATTGA
TGGACATTTGGGTTGTTTTCACTCTTTGGCTATTACCAGTAATACTGCTCTGAACATTTGTGTA
GAGCCCTGCTGGAGAAGAAGCAGAGAAAAAAGCGCCTTGAGCCGCTCATGGTACAACCAAATCC
AGAAGCCAGGCTACGTCGATCAAAGCCAAGAGGTAGCGAGGAGCAAACTCCTTTGGTGGAACCT
CATACCCCACAGAACGAGGTCATCCTACATGGCATTGATGGTCCAGCTGCCTTCTTGAAGCCAG
ATGCTCAAGATTTGGAAACCAAACTTCATGTTGTCTCAGTAGACTCTTCTGCTGTGGAAGAGGA
TACCGAAGGAAGTGTTGATGGAGAAGGCACTTTGGATACTGTGTCCAAGCCAGATCTCCAGGAG
ATTCTCCAAAAACATGGTATCTCAGGTAGTTTGAACTTTGATGAAGAGGAGACCGATGGGGAGG
AAGAAGGAAAAAAACTATGTCATTCACCATATTCAGTGGCAGAGAGACCCAATTCTGCTTCTAG
CCAGAAATCAACCACAGATACAGGAGCTTCTGGTTCTGCATCCCAACAAACTGATAACCAGCTG
GGAGAAGTGGAGAATTTAGAGGACTTTGCATATAGTCCTGCCCCTCGGGGTATTACAGTAAAGT
GTCGGATAACCAGGGATAAAAAAGGAATGGACAGGGGTCTCTTCCCCACTTACTATATGCACTT
GGAAAAGGATGAAAATCGGAAGATATTTCTTCTTGCGGGTAGAAAGCGGAAAAAGAGCAAAACT
TCTAACTACCTTATTTCCACTGATCCAACAGATTTATCTCGTGAAGGGGAAAGTTATATTGGCA
AGCTCAGATCCAACCTCATGGGGACCAAGTTTACAGTTTATGACCATGGTGTCAGCCCAACCAA
GGCCCAAGGCCTGGTAGAAAAGGCCTATGTCCGGCAGGAGTTGGCAGCCATCTGTTACGAAACA
AATGTACTTGGATTTAAAGGTCCTAGGAAAATGTCTGTGATCATTCCAGGGATGAATATGAATC
ACGAACGGATCCCATTTCAGCCACGAAATGACCACGAGAGCTTGCTTTCCAAATGGCAAAACAA
AACCATGGAGAACTTGATTGAACTGCACAACAAGGCCCCGGTCTGGAATGATGACACACAGTCC
TATGTCCTGAACTTCCATGGCCGGGTCACTCAGGCATCTGTGAAGAACTTTCAGATAGTCCATG
ACAATGACCCTGACTACATAGTCATGCAGTTTGGACGTGTGGCAGACGATGTGTTCACCCTGGA
CTACAACTACCCGCTGTGTGCACTTCAGGCCTTTGCCATTGGCCTTTCTAGCTTTGACAGCAAG
CTAGCCTGTGAATGAGGGAAACAGCCGGCGCCGAACTTTCTCACTCAGAGCTTTCAGAAGCCAA
TAATTGCCTCCTTTGCTTTTGCCCCAGGACATGAAGAGCGATAGGCTGCCCCTTTGGGAGTCAT
CCCTGAATGTATGTATATGTGTCTATACACATGTGCGTGTTTACACATATGCCTATGTGTAAAC
ACACACATATGTACACACACACTCAACTTCTCTGGGTTTTACAGACCCGGACAATGATCACAGC
TTAACATGGGTGAGAGGCTGTTCACAGCACAGGGGTTCTTGTCCAGAGCACATTGGTAACTCCT
GAGGCTGTTGCCCCACAGATTCGGACCTTGAGAGCCAGATTTTCTATGCTTGGAGACGTGCAGC
TAGAATCAGGTCTAATGATTAAATACTTGGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGA
CCTTTCCAGAGTGGGACAGTTCCCTAAATTGCCTTTAGTCTTCAGGTCTGCACATTTTTTCCAT
AAATGGCCAGAGAGTCCTTCACAGCTGCTAAGCTTTGTTGTATTACAAGCACAGCCATGGCCAG
TTCATAAACCAGTGAGTGTGGCTGTGTCCCACTAGAATGTTATTTACAAAAAACAGGCAGCAGG
CCAGATTTGGCCTGGGGACTGGGTTGCTGGCCCCTGCTCCAGATATATTTCTTTACGCTATGGG
CCTCTCAGCATCTTCCAGAATGGGCCTGTGGTCATGATGTCATATGAGTGGGAAATGGACAACT
CTAGGAAGCAACAGTCCCACGGACTGGATCTAAAAAGGTACTCAGCTCCATCCACATAGCTTTT
ACCTTATTTTTTAAAATTTATTTTTATTATTTTTTTTAAAGTATGCTTTACGGGCAGCCCGGGT
GGCTCAGCGGTTTAGCGCCGCCTTCAGCCCAGGGCCTGATCCTGGAG

hide sequence

RefSeq Acc Id:

XM_022411530 ⟹ XP_022267238

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	27	41,819,574 - 41,884,140 (-)	NCBI
Dog10K_Boxer_Tasha	27	4,800,082 - 4,863,659 (+)	NCBI

Sequence:

show sequence

CTCGGGGCTTCTGGCCTCGGTAGCCACTTCCTGAGCCGCGGGGATGGAGGCGTCGCGCTGCCGG
CTCGGACCCCGCGGGGACAGATTGGTTATTTTCTACTGATGATATATCATGTTTTTCCTGTTTC
TTTGGATATGGAATAATTTTTTATTGTGTTCTGAACATTATGAGTGATACATTGTAAAGACTCT
GGATTCTGTTGTTTTCCTATGAAGACAATTGACTTTTTCGGTTGGATTTTTTAAAGTGCCTTTG
AAGATGAGACCATGAAACTTCGACAGCTGAAACTAGATAATCAGAGAGCCCTGCTGGAGAAGAA
GCAGAGAAAAAAGCGCCTTGAGCCGCTCATGGTACAACCAAATCCAGAAGCCAGGCTACGTCGA
TCAAAGCCAAGAGGTAGCGAGGAGCAAACTCCTTTGGTGGAACCTCATACCCCACAGAACGAGG
TCATCCTACATGGCATTGATGGTCCAGCTGCCTTCTTGAAGCCAGATGCTCAAGATTTGGAAAC
CAAACTTCATGTTGTCTCAGTAGACTCTTCTGCTGTGGAAGAGGATACCGAAGGAAGTGTTGAT
GGAGAAGGCACTTTGGATACTGTGTCCAAGCCAGATCTCCAGGAGATTCTCCAAAAACATGGTA
TCTCAGGTAGTTTGAACTTTGATGAAGAGGAGACCGATGGGGAGGAAGAAGGAAAAAAACTATG
TCATTCACCATATTCAGTGGCAGAGAGACCCAATTCTGCTTCTAGCCAGAAATCAACCACAGAT
ACAGGAGCTTCTGGTTCTGCATCCCAACAAACTGATAACCAGCTGGGAGAAGTGGAGAATTTAG
AGGACTTTGCATATAGTCCTGCCCCTCGGGGTATTACAGTAAAGTGTCGGATAACCAGGGATAA
AAAAGGAATGGACAGGGGTCTCTTCCCCACTTACTATATGCACTTGGAAAAGGATGAAAATCGG
AAGATATTTCTTCTTGCGGGTAGAAAGCGGAAAAAGAGCAAAACTTCTAACTACCTTATTTCCA
CTGATCCAACAGATTTATCTCGTGAAGGGGAAAGTTATATTGGCAAGCTCAGATCCAACCTCAT
GGGGACCAAGTTTACAGTTTATGACCATGGTGTCAGCCCAACCAAGGCCCAAGGCCTGGTAGAA
AAGGCCTATGTCCGGCAGGAGTTGGCAGCCATCTGTTACGAAACAAATGTACTTGGATTTAAAG
GTCCTAGGAAAATGTCTGTGATCATTCCAGGGATGAATATGAATCACGAACGGATCCCATTTCA
GCCACGAAATGACCACGAGAGCTTGCTTTCCAAATGGCAAAACAAAACCATGGAGAACTTGATT
GAACTGCACAACAAGGCCCCGGTCTGGAATGATGACACACAGTCCTATGTCCTGAACTTCCATG
GCCGGGTCACTCAGGCATCTGTGAAGAACTTTCAGATAGTCCATGACAATGACCCTGACTACAT
AGTCATGCAGTTTGGACGTGTGGCAGACGATGTGTTCACCCTGGACTACAACTACCCGCTGTGT
GCACTTCAGGCCTTTGCCATTGGCCTTTCTAGCTTTGACAGCAAGCTAGCCTGTGAATGAGGGA
AACAGCCGGCGCCGAACTTTCTCACTCAGAGCTTTCAGAAGCCAATAATTGCCTCCTTTGCTTT
TGCCCCAGGACATGAAGAGCGATAGGCTGCCCCTTTGGGAGTCATCCCTGAATGTATGTATATG
TGTCTATACACATGTGCGTGTTTACACATATGCCTATGTGTAAACACACACATATGTACACACA
CACTCAACTTCTCTGGGTTTTACAGACCCGGACAATGATCACAGCTTAACATGGGTGAGAGGCT
GTTCACAGCACAGGGGTTCTTGTCCAGAGCACATTGGTAACTCCTGAGGCTGTTGCCCCACAGA
TTCGGACCTTGAGAGCCAGATTTTCTATGCTTGGAGACGTGCAGCTAGAATCAGGTCTAATGAT
TAAATACTTGGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGACCTTTCCAGAGTGGGACAG
TTCCCTAAATTGCCTTTAGTCTTCAGGTCTGCACATTTTTTCCATAAATGGCCAGAGAGTCCTT
CACAGCTGCTAAGCTTTGTTGTATTACAAGCACAGCCATGGCCAGTTCATAAACCAGTGAGTGT
GGCTGTGTCCCACTAGAATGTTATTTACAAAAAACAGGCAGCAGGCCAGATTTGGCCTGGGGAC
TGGGTTGCTGGCCCCTGCTCCAGATATATTTCTTTACGCTATGGGCCTCTCAGCATCTTCCAGA
ATGGGCCTGTGGTCATGATGTCATATGAGTGGGAAATGGACAACTCTAGGAAGCAACAGTCCCA
CGGACTGGATCTAAAAAGGTACTCAGCTCCATCCACATAGCTTTTACCTTATTTTTTAAAATTT
ATTTTTATTATTTTTTTTAAAGTATGCTTTACGGGCAGCCCGGGTGGCTCAGCGGTTTAGCGCC
GCCTTCAGCCCAGGGCCTGATCCTGGAGT

hide sequence

RefSeq Acc Id:

XM_022411531 ⟹ XP_022267239

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	27	41,819,574 - 41,884,148 (-)	NCBI
Dog10K_Boxer_Tasha	27	4,800,107 - 4,863,659 (+)	NCBI

Sequence:

show sequence

GCGGCGGCCTCGGGGCTTCTGGCCTCGGTAGCCACTTCCTGAGCCGCGGGGATGGAGGCGTCGC
GCTGCCGGCTCGGACCCCGCGGGGACAGTGCCTTTGAAGATGAGACCATGAAACTTCGACAGCT
GAAACTAGATAATCAGGTTTTTGAACAACTTTATTGAGATCGAATTCACAATACTGTAAACGTA
CACCGGGTTAAAGTGCACAAATGGCTTTTAGACCTCATATCGAATGGAATCATAACATGTGATG
AGAGCCCTGCTGGAGAAGAAGCAGAGAAAAAAGCGCCTTGAGCCGCTCATGGTACAACCAAATC
CAGAAGCCAGGCTACGTCGATCAAAGCCAAGAGGTAGCGAGGAGCAAACTCCTTTGGTGGAACC
TCATACCCCACAGAACGAGGTCATCCTACATGGCATTGATGGTCCAGCTGCCTTCTTGAAGCCA
GATGCTCAAGATTTGGAAACCAAACTTCATGTTGTCTCAGTAGACTCTTCTGCTGTGGAAGAGG
ATACCGAAGGAAGTGTTGATGGAGAAGGCACTTTGGATACTGTGTCCAAGCCAGATCTCCAGGA
GATTCTCCAAAAACATGGTATCTCAGGTAGTTTGAACTTTGATGAAGAGGAGACCGATGGGGAG
GAAGAAGGAAAAAAACTATGTCATTCACCATATTCAGTGGCAGAGAGACCCAATTCTGCTTCTA
GCCAGAAATCAACCACAGATACAGGAGCTTCTGGTTCTGCATCCCAACAAACTGATAACCAGCT
GGGAGAAGTGGAGAATTTAGAGGACTTTGCATATAGTCCTGCCCCTCGGGGTATTACAGTAAAG
TGTCGGATAACCAGGGATAAAAAAGGAATGGACAGGGGTCTCTTCCCCACTTACTATATGCACT
TGGAAAAGGATGAAAATCGGAAGATATTTCTTCTTGCGGGTAGAAAGCGGAAAAAGAGCAAAAC
TTCTAACTACCTTATTTCCACTGATCCAACAGATTTATCTCGTGAAGGGGAAAGTTATATTGGC
AAGCTCAGATCCAACCTCATGGGGACCAAGTTTACAGTTTATGACCATGGTGTCAGCCCAACCA
AGGCCCAAGGCCTGGTAGAAAAGGCCTATGTCCGGCAGGAGTTGGCAGCCATCTGTTACGAAAC
AAATGTACTTGGATTTAAAGGTCCTAGGAAAATGTCTGTGATCATTCCAGGGATGAATATGAAT
CACGAACGGATCCCATTTCAGCCACGAAATGACCACGAGAGCTTGCTTTCCAAATGGCAAAACA
AAACCATGGAGAACTTGATTGAACTGCACAACAAGGCCCCGGTCTGGAATGATGACACACAGTC
CTATGTCCTGAACTTCCATGGCCGGGTCACTCAGGCATCTGTGAAGAACTTTCAGATAGTCCAT
GACAATGACCCTGACTACATAGTCATGCAGTTTGGACGTGTGGCAGACGATGTGTTCACCCTGG
ACTACAACTACCCGCTGTGTGCACTTCAGGCCTTTGCCATTGGCCTTTCTAGCTTTGACAGCAA
GCTAGCCTGTGAATGAGGGAAACAGCCGGCGCCGAACTTTCTCACTCAGAGCTTTCAGAAGCCA
ATAATTGCCTCCTTTGCTTTTGCCCCAGGACATGAAGAGCGATAGGCTGCCCCTTTGGGAGTCA
TCCCTGAATGTATGTATATGTGTCTATACACATGTGCGTGTTTACACATATGCCTATGTGTAAA
CACACACATATGTACACACACACTCAACTTCTCTGGGTTTTACAGACCCGGACAATGATCACAG
CTTAACATGGGTGAGAGGCTGTTCACAGCACAGGGGTTCTTGTCCAGAGCACATTGGTAACTCC
TGAGGCTGTTGCCCCACAGATTCGGACCTTGAGAGCCAGATTTTCTATGCTTGGAGACGTGCAG
CTAGAATCAGGTCTAATGATTAAATACTTGGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAAG
ACCTTTCCAGAGTGGGACAGTTCCCTAAATTGCCTTTAGTCTTCAGGTCTGCACATTTTTTCCA
TAAATGGCCAGAGAGTCCTTCACAGCTGCTAAGCTTTGTTGTATTACAAGCACAGCCATGGCCA
GTTCATAAACCAGTGAGTGTGGCTGTGTCCCACTAGAATGTTATTTACAAAAAACAGGCAGCAG
GCCAGATTTGGCCTGGGGACTGGGTTGCTGGCCCCTGCTCCAGATATATTTCTTTACGCTATGG
GCCTCTCAGCATCTTCCAGAATGGGCCTGTGGTCATGATGTCATATGAGTGGGAAATGGACAAC
TCTAGGAAGCAACAGTCCCACGGACTGGATCTAAAAAGGTACTCAGCTCCATCCACATAGCTTT
TACCTTATTTTTTAAAATTTATTTTTATTATTTTTTTTAAAGTATGCTTTACGGGCAGCCCGGG
TGGCTCAGCGGTTTAGCGCCGCCTTCAGCCCAGGGCCTGATCCTGGAGT

hide sequence

RefSeq Acc Id:

XM_038439595 ⟹ XP_038295523

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	27	42,177,179 - 42,187,473 (-)	NCBI

RefSeq Acc Id:

XM_038459675 ⟹ XP_038315603

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	27	4,800,107 - 4,863,659 (+)	NCBI

RefSeq Acc Id:

XM_038459676 ⟹ XP_038315604

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	27	4,839,112 - 4,863,659 (+)	NCBI

RefSeq Acc Id:

XM_038513976 ⟹ XP_038369904

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	27	42,119,743 - 42,183,867 (-)	NCBI

RefSeq Acc Id:

XM_038576440 ⟹ XP_038432368

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	27	4,159,786 - 4,223,607 (+)	NCBI

RefSeq Acc Id:

XM_038576441 ⟹ XP_038432369

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	27	4,159,812 - 4,223,607 (+)	NCBI

RefSeq Acc Id:

XM_038576442 ⟹ XP_038432370

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	27	4,159,786 - 4,223,607 (+)	NCBI

RefSeq Acc Id:

XM_038576443 ⟹ XP_038432371

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	27	4,159,837 - 4,223,607 (+)	NCBI

RefSeq Acc Id:

XM_038576444 ⟹ XP_038432372

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	27	4,198,906 - 4,223,607 (+)	NCBI

RefSeq Acc Id:

XM_038576445 ⟹ XP_038432373

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	27	4,159,837 - 4,223,607 (+)	NCBI

RefSeq Acc Id:

XM_038576446 ⟹ XP_038432374

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	27	4,198,905 - 4,223,607 (+)	NCBI

RefSeq Acc Id:

XM_038641822 ⟹ XP_038497750

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	27	42,089,002 - 42,153,483 (-)	NCBI

RefSeq Acc Id:

XM_038641823 ⟹ XP_038497751

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	27	42,089,002 - 42,153,457 (-)	NCBI

RefSeq Acc Id:

XM_038641824 ⟹ XP_038497752

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	27	42,089,002 - 42,153,483 (-)	NCBI

RefSeq Acc Id:

XM_038641825 ⟹ XP_038497753

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	27	42,089,002 - 42,153,432 (-)	NCBI

RefSeq Acc Id:

XM_038641826 ⟹ XP_038497754

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	27	42,089,002 - 42,113,986 (-)	NCBI

RefSeq Acc Id:

XM_038641827 ⟹ XP_038497755

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	27	42,089,002 - 42,153,432 (-)	NCBI

RefSeq Acc Id:

XM_038641828 ⟹ XP_038497756

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	27	42,089,002 - 42,113,987 (-)	NCBI

RefSeq Acc Id:

XM_849551 ⟹ XP_854644

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	27	41,819,574 - 41,884,198 (-)	NCBI
Dog10K_Boxer_Tasha	27	4,800,052 - 4,863,659 (+)	NCBI

Sequence:

show sequence

TGCGGTTGCCAGGGGGCGGGGCCACGCCGCCAGTCCGGCTCGCCCCCCGAGCGGCGGCCTCGGG
GCTTCTGGCCTCGGTAGCCACTTCCTGAGCCGCGGGGATGGAGGCGTCGCGCTGCCGGCTCGGA
CCCCGCGGGGACAGTGCCTTTGAAGATGAGACCATGAAACTTCGACAGCTGAAACTAGATAATC
AGAGAGCCCTGCTGGAGAAGAAGCAGAGAAAAAAGCGCCTTGAGCCGCTCATGGTACAACCAAA
TCCAGAAGCCAGGCTACGTCGATCAAAGCCAAGAGGTAGCGAGGAGCAAACTCCTTTGGTGGAA
CCTCATACCCCACAGAACGAGGTCATCCTACATGGCATTGATGGTCCAGCTGCCTTCTTGAAGC
CAGATGCTCAAGATTTGGAAACCAAACTTCATGTTGTCTCAGTAGACTCTTCTGCTGTGGAAGA
GGATACCGAAGGAAGTGTTGATGGAGAAGGCACTTTGGATACTGTGTCCAAGCCAGATCTCCAG
GAGATTCTCCAAAAACATGGTATCTCAGGTAGTTTGAACTTTGATGAAGAGGAGACCGATGGGG
AGGAAGAAGGAAAAAAACTATGTCATTCACCATATTCAGTGGCAGAGAGACCCAATTCTGCTTC
TAGCCAGAAATCAACCACAGATACAGGAGCTTCTGGTTCTGCATCCCAACAAACTGATAACCAG
CTGGGAGAAGTGGAGAATTTAGAGGACTTTGCATATAGTCCTGCCCCTCGGGGTATTACAGTAA
AGTGTCGGATAACCAGGGATAAAAAAGGAATGGACAGGGGTCTCTTCCCCACTTACTATATGCA
CTTGGAAAAGGATGAAAATCGGAAGATATTTCTTCTTGCGGGTAGAAAGCGGAAAAAGAGCAAA
ACTTCTAACTACCTTATTTCCACTGATCCAACAGATTTATCTCGTGAAGGGGAAAGTTATATTG
GCAAGCTCAGATCCAACCTCATGGGGACCAAGTTTACAGTTTATGACCATGGTGTCAGCCCAAC
CAAGGCCCAAGGCCTGGTAGAAAAGGCCTATGTCCGGCAGGAGTTGGCAGCCATCTGTTACGAA
ACAAATGTACTTGGATTTAAAGGTCCTAGGAAAATGTCTGTGATCATTCCAGGGATGAATATGA
ATCACGAACGGATCCCATTTCAGCCACGAAATGACCACGAGAGCTTGCTTTCCAAATGGCAAAA
CAAAACCATGGAGAACTTGATTGAACTGCACAACAAGGCCCCGGTCTGGAATGATGACACACAG
TCCTATGTCCTGAACTTCCATGGCCGGGTCACTCAGGCATCTGTGAAGAACTTTCAGATAGTCC
ATGACAATGACCCTGACTACATAGTCATGCAGTTTGGACGTGTGGCAGACGATGTGTTCACCCT
GGACTACAACTACCCGCTGTGTGCACTTCAGGCCTTTGCCATTGGCCTTTCTAGCTTTGACAGC
AAGCTAGCCTGTGAATGAGGGAAACAGCCGGCGCCGAACTTTCTCACTCAGAGCTTTCAGAAGC
CAATAATTGCCTCCTTTGCTTTTGCCCCAGGACATGAAGAGCGATAGGCTGCCCCTTTGGGAGT
CATCCCTGAATGTATGTATATGTGTCTATACACATGTGCGTGTTTACACATATGCCTATGTGTA
AACACACACATATGTACACACACACTCAACTTCTCTGGGTTTTACAGACCCGGACAATGATCAC
AGCTTAACATGGGTGAGAGGCTGTTCACAGCACAGGGGTTCTTGTCCAGAGCACATTGGTAACT
CCTGAGGCTGTTGCCCCACAGATTCGGACCTTGAGAGCCAGATTTTCTATGCTTGGAGACGTGC
AGCTAGAATCAGGTCTAATGATTAAATACTTGGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTGA
AGACCTTTCCAGAGTGGGACAGTTCCCTAAATTGCCTTTAGTCTTCAGGTCTGCACATTTTTTC
CATAAATGGCCAGAGAGTCCTTCACAGCTGCTAAGCTTTGTTGTATTACAAGCACAGCCATGGC
CAGTTCATAAACCAGTGAGTGTGGCTGTGTCCCACTAGAATGTTATTTACAAAAAACAGGCAGC
AGGCCAGATTTGGCCTGGGGACTGGGTTGCTGGCCCCTGCTCCAGATATATTTCTTTACGCTAT
GGGCCTCTCAGCATCTTCCAGAATGGGCCTGTGGTCATGATGTCATATGAGTGGGAAATGGACA
ACTCTAGGAAGCAACAGTCCCACGGACTGGATCTAAAAAGGTACTCAGCTCCATCCACATAGCT
TTTACCTTATTTTTTAAAATTTATTTTTATTATTTTTTTTAAAGTATGCTTTACGGGCAGCCCG
GGTGGCTCAGCGGTTTAGCGCCGCCTTCAGCCCAGGGCCTGATCCTGGAGT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005637348	(Get FASTA)	NCBI Sequence Viewer
	XP_013964072	(Get FASTA)	NCBI Sequence Viewer
	XP_022267238	(Get FASTA)	NCBI Sequence Viewer
	XP_022267239	(Get FASTA)	NCBI Sequence Viewer
	XP_038295523	(Get FASTA)	NCBI Sequence Viewer
	XP_038315603	(Get FASTA)	NCBI Sequence Viewer
	XP_038315604	(Get FASTA)	NCBI Sequence Viewer
	XP_038369904	(Get FASTA)	NCBI Sequence Viewer
	XP_038432368	(Get FASTA)	NCBI Sequence Viewer
	XP_038432369	(Get FASTA)	NCBI Sequence Viewer
	XP_038432370	(Get FASTA)	NCBI Sequence Viewer
	XP_038432371	(Get FASTA)	NCBI Sequence Viewer
	XP_038432372	(Get FASTA)	NCBI Sequence Viewer
	XP_038432373	(Get FASTA)	NCBI Sequence Viewer
	XP_038432374	(Get FASTA)	NCBI Sequence Viewer
	XP_038497750	(Get FASTA)	NCBI Sequence Viewer
	XP_038497751	(Get FASTA)	NCBI Sequence Viewer
	XP_038497752	(Get FASTA)	NCBI Sequence Viewer
	XP_038497753	(Get FASTA)	NCBI Sequence Viewer
	XP_038497754	(Get FASTA)	NCBI Sequence Viewer
	XP_038497755	(Get FASTA)	NCBI Sequence Viewer
	XP_038497756	(Get FASTA)	NCBI Sequence Viewer
	XP_854644	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000022958.3
	ENSCAFP00000048129.2
	ENSCAFP00030041764.1
	ENSCAFP00040039569.1
	ENSCAFP00845034205
	ENSCAFP00845034205.1

RefSeq Acc Id:	XP_005637348 ⟸ XM_005637291
- Peptide Label:	isoform X19
- UniProtKB:	A0A8C0Z622 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEASRCRLGPRGDSAFEDETMKLRQLKLDNQRALLEKKQRKKRLEPLMVQPNPEARLRRSKPRG IDGPAAFLKPDAQDLETKLHVVSVDSSAVEEDTEGSVDGEGTLDTVSKPDLQEILQKHGISGSL NFDEEETDGEEEGKKLCHSPYSVAERPNSASSQKSTTDTGASGSASQQTDNQLGEVENLEDFAY SPAPRGITVKCRITRDKKGMDRGLFPTYYMHLEKDENRKIFLLAGRKRKKSKTSNYLISTDPTD LSREGESYIGKLRSNLMGTKFTVYDHGVSPTKAQGLVEKAYVRQELAAICYETNVLGFKGPRKM SVIIPGMNMNHERIPFQPRNDHESLLSKWQNKTMENLIELHNKAPVWNDDTQSYVLNFHGRVTQ ASVKNFQIVHDNDPDYIVMQFGRVADDVFTLDYNYPLCALQAFAIGLSSFDSKLACE hide sequence

RefSeq Acc Id:	XP_854644 ⟸ XM_849551
- Peptide Label:	isoform X17
- UniProtKB:	A0A8C0PHH4 (UniProtKB/TrEMBL), A0A8C0R139 (UniProtKB/TrEMBL), A0A8P0NGY5 (UniProtKB/TrEMBL), A0A8C0Z622 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEASRCRLGPRGDSAFEDETMKLRQLKLDNQRALLEKKQRKKRLEPLMVQPNPEARLRRSKPRG SEEQTPLVEPHTPQNEVILHGIDGPAAFLKPDAQDLETKLHVVSVDSSAVEEDTEGSVDGEGTL DTVSKPDLQEILQKHGISGSLNFDEEETDGEEEGKKLCHSPYSVAERPNSASSQKSTTDTGASG SASQQTDNQLGEVENLEDFAYSPAPRGITVKCRITRDKKGMDRGLFPTYYMHLEKDENRKIFLL AGRKRKKSKTSNYLISTDPTDLSREGESYIGKLRSNLMGTKFTVYDHGVSPTKAQGLVEKAYVR QELAAICYETNVLGFKGPRKMSVIIPGMNMNHERIPFQPRNDHESLLSKWQNKTMENLIELHNK APVWNDDTQSYVLNFHGRVTQASVKNFQIVHDNDPDYIVMQFGRVADDVFTLDYNYPLCALQAF AIGLSSFDSKLACE hide sequence

RefSeq Acc Id:	XP_013964072 ⟸ XM_014108597
- Peptide Label:	isoform X21
- UniProtKB:	A0A8C0Z622 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVQPNPEARLRRSKPRGSEEQTPLVEPHTPQNEVILHGIDGPAAFLKPDAQDLETKLHVVSVDS SAVEEDTEGSVDGEGTLDTVSKPDLQEILQKHGISGSLNFDEEETDGEEEGKKLCHSPYSVAER PNSASSQKSTTDTGASGSASQQTDNQLGEVENLEDFAYSPAPRGITVKCRITRDKKGMDRGLFP TYYMHLEKDENRKIFLLAGRKRKKSKTSNYLISTDPTDLSREGESYIGKLRSNLMGTKFTVYDH GVSPTKAQGLVEKAYVRQELAAICYETNVLGFKGPRKMSVIIPGMNMNHERIPFQPRNDHESLL SKWQNKTMENLIELHNKAPVWNDDTQSYVLNFHGRVTQASVKNFQIVHDNDPDYIVMQFGRVAD DVFTLDYNYPLCALQAFAIGLSSFDSKLACE hide sequence

RefSeq Acc Id:	XP_022267239 ⟸ XM_022411531
- Peptide Label:	isoform X20
- UniProtKB:	A0A8P0T0Z4 (UniProtKB/TrEMBL), A0A8C0Z622 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRALLEKKQRKKRLEPLMVQPNPEARLRRSKPRGSEEQTPLVEPHTPQNEVILHGIDGPAAFLK PDAQDLETKLHVVSVDSSAVEEDTEGSVDGEGTLDTVSKPDLQEILQKHGISGSLNFDEEETDG EEEGKKLCHSPYSVAERPNSASSQKSTTDTGASGSASQQTDNQLGEVENLEDFAYSPAPRGITV KCRITRDKKGMDRGLFPTYYMHLEKDENRKIFLLAGRKRKKSKTSNYLISTDPTDLSREGESYI GKLRSNLMGTKFTVYDHGVSPTKAQGLVEKAYVRQELAAICYETNVLGFKGPRKMSVIIPGMNM NHERIPFQPRNDHESLLSKWQNKTMENLIELHNKAPVWNDDTQSYVLNFHGRVTQASVKNFQIV HDNDPDYIVMQFGRVADDVFTLDYNYPLCALQAFAIGLSSFDSKLACE hide sequence

RefSeq Acc Id:	XP_022267238 ⟸ XM_022411530
- Peptide Label:	isoform X18
- UniProtKB:	A0A8C0Z622 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLRQLKLDNQRALLEKKQRKKRLEPLMVQPNPEARLRRSKPRGSEEQTPLVEPHTPQNEVILH GIDGPAAFLKPDAQDLETKLHVVSVDSSAVEEDTEGSVDGEGTLDTVSKPDLQEILQKHGISGS LNFDEEETDGEEEGKKLCHSPYSVAERPNSASSQKSTTDTGASGSASQQTDNQLGEVENLEDFA YSPAPRGITVKCRITRDKKGMDRGLFPTYYMHLEKDENRKIFLLAGRKRKKSKTSNYLISTDPT DLSREGESYIGKLRSNLMGTKFTVYDHGVSPTKAQGLVEKAYVRQELAAICYETNVLGFKGPRK MSVIIPGMNMNHERIPFQPRNDHESLLSKWQNKTMENLIELHNKAPVWNDDTQSYVLNFHGRVT QASVKNFQIVHDNDPDYIVMQFGRVADDVFTLDYNYPLCALQAFAIGLSSFDSKLACE hide sequence

RefSeq Acc Id:

ENSCAFP00000048129 ⟸ ENSCAFT00000070820

RefSeq Acc Id:

ENSCAFP00000022958 ⟸ ENSCAFT00000024749

RefSeq Acc Id:	XP_038369904 ⟸ XM_038513976
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038497752 ⟸ XM_038641824
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038497750 ⟸ XM_038641822
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038497751 ⟸ XM_038641823
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038497755 ⟸ XM_038641827
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038497753 ⟸ XM_038641825
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038497756 ⟸ XM_038641828
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038497754 ⟸ XM_038641826
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038295523 ⟸ XM_038439595
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3PNG5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038315603 ⟸ XM_038459675
- Peptide Label:	isoform X22
- UniProtKB:	A0A8C0Z622 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038315604 ⟸ XM_038459676
- Peptide Label:	isoform X23
- UniProtKB:	A0A8C0Z622 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038432368 ⟸ XM_038576440
- Peptide Label:	isoform X10
- UniProtKB:	A0A8C0PHH4 (UniProtKB/TrEMBL), A0A8C0R139 (UniProtKB/TrEMBL), A0A8C0Z622 (UniProtKB/TrEMBL), A0A8P0NGY5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038432370 ⟸ XM_038576442
- Peptide Label:	isoform X12
- UniProtKB:	A0A8C0Z622 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038432369 ⟸ XM_038576441
- Peptide Label:	isoform X11
- UniProtKB:	A0A8C0Z622 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038432371 ⟸ XM_038576443
- Peptide Label:	isoform X13
- UniProtKB:	A0A8C0Z622 (UniProtKB/TrEMBL), A0A8P0T0Z4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038432373 ⟸ XM_038576445
- Peptide Label:	isoform X15
- UniProtKB:	A0A8C0Z622 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038432374 ⟸ XM_038576446
- Peptide Label:	isoform X16
- UniProtKB:	A0A8C0Z622 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038432372 ⟸ XM_038576444
- Peptide Label:	isoform X14
- UniProtKB:	A0A8C0Z622 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845034205 ⟸ ENSCAFT00845043659

Protein Domains

Tubby C-terminal Tubby N-terminal

Promoters

RGD ID:

13688227

Promoter ID:

EPDNEW_C6294

Type:

initiation region

Name:

TULP3_1

Description:

tubby like protein 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	27	41,884,115 - 41,884,175	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000015618	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030025861	UniProtKB/TrEMBL
	ENSCAFG00040024307	UniProtKB/TrEMBL
	ENSCAFG00845024683	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000024749.5	UniProtKB/TrEMBL
	ENSCAFT00000070820.2	UniProtKB/TrEMBL
	ENSCAFT00030047749.1	UniProtKB/TrEMBL
	ENSCAFT00040045311.1	UniProtKB/TrEMBL
	ENSCAFT00845043659	ENTREZGENE
	ENSCAFT00845043659.1	UniProtKB/TrEMBL
InterPro	Tubby-like_C	UniProtKB/TrEMBL
	Tubby_C	UniProtKB/TrEMBL
	Tubby_C_CS	UniProtKB/TrEMBL
	Tubby_N	UniProtKB/TrEMBL
NCBI Gene	TULP3	ENTREZGENE
PANTHER	TUBBY-RELATED	UniProtKB/TrEMBL
	TUBBY-RELATED PROTEIN 3	UniProtKB/TrEMBL
Pfam	Tub	UniProtKB/TrEMBL
	Tub_N	UniProtKB/TrEMBL
PRINTS	SUPERTUBBY	UniProtKB/TrEMBL
	TUBBYPROTEIN	UniProtKB/TrEMBL
PROSITE	TUB_1	UniProtKB/TrEMBL
	TUB_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54518	UniProtKB/TrEMBL
UniProt	A0A8C0PHH4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0R139	ENTREZGENE
	A0A8C0Z622	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PNG5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0NGY5	ENTREZGENE
	A0A8P0T0Z4	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A8P0NGY5	UniProtKB/TrEMBL
VGNC ID	VGNC:47998	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-08-06	TULP3	TUB like protein 3	TULP3	tubby like protein 3	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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