MYO5A (myosin VA) - Rat Genome Database

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Gene: MYO5A (myosin VA) Canis lupus familiaris
Analyze
Symbol: MYO5A
Name: myosin VA
RGD ID: 12159084
Description: ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent protein binding (ortholog); calcium ion binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); axo-dendritic protein transport (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); dystonia (ortholog); FOUND IN actomyosin (ortholog); actomyosin, myosin complex part (ortholog); axon (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: myosin VA (heavy chain 12, myoxin); unconventional myosin-Va
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13017,990,521 - 18,122,160 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3017,888,419 - 18,213,061 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3017,917,091 - 18,108,854 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03018,136,193 - 18,328,524 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3018,141,754 - 18,328,530 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13018,055,372 - 18,247,165 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03018,173,117 - 18,365,153 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03018,280,846 - 18,470,667 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
actin filament organization  (IEA)
actin filament-based movement  (ISO)
axo-dendritic protein transport  (ISO)
cellular response to insulin stimulus  (ISO)
chemical synaptic transmission  (ISO)
developmental pigmentation  (ISO)
dopamine metabolic process  (ISO)
endoplasmic reticulum localization  (ISO)
establishment of endoplasmic reticulum localization to postsynapse  (ISO)
exocytosis  (ISO)
hair follicle maturation  (ISO)
insulin secretion  (ISO)
locomotion involved in locomotory behavior  (ISO)
long-chain fatty acid biosynthetic process  (ISO)
macroautophagy  (ISO)
melanin biosynthetic process  (ISO)
melanin metabolic process  (ISO)
melanocyte differentiation  (ISO)
melanosome localization  (ISO)
melanosome transport  (ISO)
myelination  (ISO)
negative regulation of dopamine secretion  (ISO)
negative regulation of synaptic transmission, glutamatergic  (ISO)
neuromuscular process controlling balance  (ISO)
odontogenesis  (ISO)
pigmentation  (ISO)
positive regulation of cellular response to insulin stimulus  (ISO)
positive regulation of cytochrome-c oxidase activity  (ISO)
positive regulation of protein localization to plasma membrane  (ISO)
positive regulation of vascular associated smooth muscle cell migration  (ISO)
post-Golgi vesicle-mediated transport  (IEA)
protein localization to plasma membrane  (ISO)
protein-containing complex assembly  (ISO)
reactive gliosis  (ISO)
regulation of exocytosis  (ISO)
regulation of Golgi organization  (ISO)
regulation of postsynaptic cytosolic calcium ion concentration  (ISO)
secretory granule localization  (ISO)
synapse organization  (ISO)
vesicle transport along actin filament  (IEA,ISO)
vesicle-mediated transport  (ISO)
visual perception  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202   PMID:34680875  


Genomics

Comparative Map Data
MYO5A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13017,990,521 - 18,122,160 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3017,888,419 - 18,213,061 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3017,917,091 - 18,108,854 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03018,136,193 - 18,328,524 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3018,141,754 - 18,328,530 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13018,055,372 - 18,247,165 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03018,173,117 - 18,365,153 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03018,280,846 - 18,470,667 (-)NCBIUU_Cfam_GSD_1.0
MYO5A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381552,307,283 - 52,529,050 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1552,307,281 - 52,529,132 (-)EnsemblGRCh38hg38GRCh38
GRCh371552,599,480 - 52,821,247 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361550,386,770 - 50,608,539 (-)NCBINCBI36Build 36hg18NCBI36
Build 341550,392,601 - 50,608,539NCBI
Celera1529,494,500 - 29,716,298 (-)NCBICelera
Cytogenetic Map15q21.2NCBI
HuRef1529,430,131 - 29,652,241 (-)NCBIHuRef
CHM1_11552,717,420 - 52,939,199 (-)NCBICHM1_1
T2T-CHM13v2.01550,115,562 - 50,337,348 (-)NCBIT2T-CHM13v2.0
Myo5a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39974,975,183 - 75,130,970 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl974,978,297 - 75,130,970 (+)EnsemblGRCm39 Ensembl
GRCm38975,069,799 - 75,223,688 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl975,071,015 - 75,223,688 (+)EnsemblGRCm38mm10GRCm38
MGSCv37974,919,013 - 75,071,495 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36974,858,205 - 75,005,381 (+)NCBIMGSCv36mm8
Celera972,225,104 - 72,382,491 (+)NCBICelera
Cytogenetic Map9DNCBI
cM Map942.26NCBI
Myo5a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8884,692,524 - 84,860,564 (+)NCBIGRCr8
mRatBN7.2875,811,985 - 75,980,049 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl875,812,412 - 75,975,918 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx881,318,987 - 81,482,100 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0879,584,646 - 79,746,779 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0877,418,315 - 77,581,426 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0882,038,966 - 82,156,507 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl882,037,977 - 82,156,617 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0881,641,953 - 81,759,995 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4879,909,224 - 80,027,290 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1879,928,282 - 80,046,341 (+)NCBI
Celera875,604,281 - 75,764,672 (+)NCBICelera
Cytogenetic Map8q24NCBI
Myo5a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554092,428,815 - 2,530,012 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554092,409,503 - 2,530,539 (+)NCBIChiLan1.0ChiLan1.0
MYO5A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21641,541,713 - 41,765,479 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11545,722,108 - 45,945,837 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01531,246,192 - 31,470,040 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11549,572,084 - 49,699,507 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1549,578,491 - 49,704,319 (-)Ensemblpanpan1.1panPan2
Myo5a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864096,257,769 - 96,409,323 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647114,111,841 - 14,254,246 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647114,105,832 - 14,257,386 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYO5A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1119,165,942 - 119,394,725 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11119,165,751 - 119,398,591 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21132,234,339 - 132,481,044 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MYO5A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12630,865,947 - 31,085,184 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666048110,145,270 - 110,364,249 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Myo5a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247318,113,715 - 8,280,823 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247318,114,557 - 8,280,586 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MYO5A
1369 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 4 6 11 8 5
Low 5 5 16 5 2 5 6 1 5 6
Below cutoff 1 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022412522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038442356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038442357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038442358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038442359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038442360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038442361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038442362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000024852   ⟹   ENSCAFP00000023057
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3017,888,419 - 17,972,314 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000025057   ⟹   ENSCAFP00000023255
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3017,996,438 - 18,113,073 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000046580   ⟹   ENSCAFP00000039215
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3017,996,438 - 18,113,073 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000048838   ⟹   ENSCAFP00000041525
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3017,996,438 - 18,116,499 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000050187   ⟹   ENSCAFP00000036571
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3017,888,419 - 17,972,314 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000061528   ⟹   ENSCAFP00000045032
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3017,888,419 - 18,113,073 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000064334   ⟹   ENSCAFP00000050462
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3017,996,438 - 18,213,061 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000086662   ⟹   ENSCAFP00000061161
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3017,888,419 - 18,113,073 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845048448   ⟹   ENSCAFP00845038006
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3018,141,754 - 18,328,530 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845048669   ⟹   ENSCAFP00845038180
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3018,141,754 - 18,328,530 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845048805   ⟹   ENSCAFP00845038292
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3018,141,754 - 18,328,530 (-)Ensembl
RefSeq Acc Id: XM_038442356   ⟹   XP_038298284
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03018,136,193 - 18,328,524 (-)NCBI
RefSeq Acc Id: XM_038442357   ⟹   XP_038298285
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03018,136,193 - 18,328,524 (-)NCBI
RefSeq Acc Id: XM_038442358   ⟹   XP_038298286
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03018,142,236 - 18,328,524 (-)NCBI
RefSeq Acc Id: XM_038442359   ⟹   XP_038298287
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03018,142,236 - 18,328,524 (-)NCBI
RefSeq Acc Id: XM_038442360   ⟹   XP_038298288
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03018,142,236 - 18,328,524 (-)NCBI
RefSeq Acc Id: XM_038442361   ⟹   XP_038298289
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03018,136,193 - 18,328,524 (-)NCBI
RefSeq Acc Id: XM_038442362   ⟹   XP_038298290
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03018,142,236 - 18,328,524 (-)NCBI
RefSeq Acc Id: XM_038461151   ⟹   XP_038317079
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3017,917,091 - 18,108,854 (-)NCBI
RefSeq Acc Id: XM_038461152   ⟹   XP_038317080
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3017,917,091 - 18,108,854 (-)NCBI
RefSeq Acc Id: XM_038461153   ⟹   XP_038317081
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3017,923,133 - 18,108,854 (-)NCBI
RefSeq Acc Id: XM_038461154   ⟹   XP_038317082
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3017,923,133 - 18,108,854 (-)NCBI
RefSeq Acc Id: XM_038461155   ⟹   XP_038317083
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3017,923,133 - 18,108,854 (-)NCBI
RefSeq Acc Id: XM_038461156   ⟹   XP_038317084
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3017,917,091 - 18,108,854 (-)NCBI
RefSeq Acc Id: XM_038461157   ⟹   XP_038317085
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3017,923,133 - 18,108,854 (-)NCBI
RefSeq Acc Id: XM_038516807   ⟹   XP_038372735
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13018,055,372 - 18,247,165 (-)NCBI
RefSeq Acc Id: XM_038516808   ⟹   XP_038372736
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13018,055,372 - 18,247,165 (-)NCBI
RefSeq Acc Id: XM_038516809   ⟹   XP_038372737
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13018,061,414 - 18,247,165 (-)NCBI
RefSeq Acc Id: XM_038516810   ⟹   XP_038372738
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13018,061,414 - 18,247,165 (-)NCBI
RefSeq Acc Id: XM_038516811   ⟹   XP_038372739
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13018,061,414 - 18,247,165 (-)NCBI
RefSeq Acc Id: XM_038516812   ⟹   XP_038372740
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13018,055,372 - 18,247,165 (-)NCBI
RefSeq Acc Id: XM_038516813   ⟹   XP_038372741
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13018,061,414 - 18,247,165 (-)NCBI
RefSeq Acc Id: XM_038580443   ⟹   XP_038436371
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03018,280,846 - 18,470,667 (-)NCBI
RefSeq Acc Id: XM_038580444   ⟹   XP_038436372
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03018,280,846 - 18,470,667 (-)NCBI
RefSeq Acc Id: XM_038580445   ⟹   XP_038436373
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03018,286,881 - 18,470,667 (-)NCBI
RefSeq Acc Id: XM_038580446   ⟹   XP_038436374
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03018,286,881 - 18,470,667 (-)NCBI
RefSeq Acc Id: XM_038580447   ⟹   XP_038436375
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03018,286,881 - 18,470,667 (-)NCBI
RefSeq Acc Id: XM_038580448   ⟹   XP_038436376
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03018,280,846 - 18,470,667 (-)NCBI
RefSeq Acc Id: XM_038580449   ⟹   XP_038436377
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03018,286,881 - 18,470,667 (-)NCBI
RefSeq Acc Id: XM_038644745   ⟹   XP_038500673
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03018,173,117 - 18,365,153 (-)NCBI
RefSeq Acc Id: XM_038644746   ⟹   XP_038500674
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03018,173,117 - 18,365,153 (-)NCBI
RefSeq Acc Id: XM_038644747   ⟹   XP_038500675
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03018,179,159 - 18,365,153 (-)NCBI
RefSeq Acc Id: XM_038644748   ⟹   XP_038500676
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03018,179,159 - 18,365,153 (-)NCBI
RefSeq Acc Id: XM_038644749   ⟹   XP_038500677
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03018,179,159 - 18,365,153 (-)NCBI
RefSeq Acc Id: XM_038644750   ⟹   XP_038500678
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03018,173,117 - 18,365,153 (-)NCBI
RefSeq Acc Id: XM_038644751   ⟹   XP_038500679
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03018,179,159 - 18,365,153 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038298284 (Get FASTA)   NCBI Sequence Viewer  
  XP_038298285 (Get FASTA)   NCBI Sequence Viewer  
  XP_038298286 (Get FASTA)   NCBI Sequence Viewer  
  XP_038298287 (Get FASTA)   NCBI Sequence Viewer  
  XP_038298288 (Get FASTA)   NCBI Sequence Viewer  
  XP_038298289 (Get FASTA)   NCBI Sequence Viewer  
  XP_038298290 (Get FASTA)   NCBI Sequence Viewer  
  XP_038317079 (Get FASTA)   NCBI Sequence Viewer  
  XP_038317080 (Get FASTA)   NCBI Sequence Viewer  
  XP_038317081 (Get FASTA)   NCBI Sequence Viewer  
  XP_038317082 (Get FASTA)   NCBI Sequence Viewer  
  XP_038317083 (Get FASTA)   NCBI Sequence Viewer  
  XP_038317084 (Get FASTA)   NCBI Sequence Viewer  
  XP_038317085 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372735 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372736 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372737 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372738 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372739 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372740 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372741 (Get FASTA)   NCBI Sequence Viewer  
  XP_038436371 (Get FASTA)   NCBI Sequence Viewer  
  XP_038436372 (Get FASTA)   NCBI Sequence Viewer  
  XP_038436373 (Get FASTA)   NCBI Sequence Viewer  
  XP_038436374 (Get FASTA)   NCBI Sequence Viewer  
  XP_038436375 (Get FASTA)   NCBI Sequence Viewer  
  XP_038436376 (Get FASTA)   NCBI Sequence Viewer  
  XP_038436377 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500673 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500674 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500675 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500676 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500677 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500678 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500679 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000023255.5
  ENSCAFP00000039215.3
  ENSCAFP00000041525.3
  ENSCAFP00030034379.1
  ENSCAFP00030034593.1
  ENSCAFP00030034817.1
  ENSCAFP00030034993.1
  ENSCAFP00030035213.1
  ENSCAFP00030035328.1
  ENSCAFP00030035551.1
  ENSCAFP00030035681.1
  ENSCAFP00040041483.1
  ENSCAFP00845038006
  ENSCAFP00845038006.1
  ENSCAFP00845038180
  ENSCAFP00845038180.1
  ENSCAFP00845038292
  ENSCAFP00845038292.1
RefSeq Acc Id: ENSCAFP00000050462   ⟸   ENSCAFT00000064334
RefSeq Acc Id: ENSCAFP00000036571   ⟸   ENSCAFT00000050187
RefSeq Acc Id: ENSCAFP00000023255   ⟸   ENSCAFT00000025057
RefSeq Acc Id: ENSCAFP00000041525   ⟸   ENSCAFT00000048838
RefSeq Acc Id: ENSCAFP00000023057   ⟸   ENSCAFT00000024852
RefSeq Acc Id: ENSCAFP00000061161   ⟸   ENSCAFT00000086662
RefSeq Acc Id: ENSCAFP00000045032   ⟸   ENSCAFT00000061528
RefSeq Acc Id: ENSCAFP00000039215   ⟸   ENSCAFT00000046580
RefSeq Acc Id: XP_038372740   ⟸   XM_038516812
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038372736   ⟸   XM_038516808
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038372735   ⟸   XM_038516807
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038372739   ⟸   XM_038516811
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038372741   ⟸   XM_038516813
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038372738   ⟸   XM_038516810
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038372737   ⟸   XM_038516809
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038500678   ⟸   XM_038644750
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038500674   ⟸   XM_038644746
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038500673   ⟸   XM_038644745
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038500677   ⟸   XM_038644749
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038500679   ⟸   XM_038644751
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038500676   ⟸   XM_038644748
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038500675   ⟸   XM_038644747
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038298289   ⟸   XM_038442361
- Peptide Label: isoform X6
- UniProtKB: A0A8C0L213 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038298285   ⟸   XM_038442357
- Peptide Label: isoform X2
- UniProtKB: A0A8I3SAU8 (UniProtKB/TrEMBL),   A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038298284   ⟸   XM_038442356
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038298288   ⟸   XM_038442360
- Peptide Label: isoform X5
- UniProtKB: A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038298290   ⟸   XM_038442362
- Peptide Label: isoform X7
- UniProtKB: A0A8C0L2V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038298287   ⟸   XM_038442359
- Peptide Label: isoform X4
- UniProtKB: A0A8I3PYC4 (UniProtKB/TrEMBL),   A0A8C0L213 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038298286   ⟸   XM_038442358
- Peptide Label: isoform X3
- UniProtKB: A0A8I3Q296 (UniProtKB/TrEMBL),   A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038317084   ⟸   XM_038461156
- Peptide Label: isoform X6
- UniProtKB: A0A8C0L213 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038317080   ⟸   XM_038461152
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PH82 (UniProtKB/TrEMBL),   A0A8P0STK2 (UniProtKB/TrEMBL),   A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038317079   ⟸   XM_038461151
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038317083   ⟸   XM_038461155
- Peptide Label: isoform X5
- UniProtKB: A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038317085   ⟸   XM_038461157
- Peptide Label: isoform X7
- UniProtKB: A0A8C0L2V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038317082   ⟸   XM_038461154
- Peptide Label: isoform X4
- UniProtKB: A0A8P0NHB0 (UniProtKB/TrEMBL),   A0A8C0L213 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038317081   ⟸   XM_038461153
- Peptide Label: isoform X3
- UniProtKB: A0A8C0P9U8 (UniProtKB/TrEMBL),   A0A8P0SVE6 (UniProtKB/TrEMBL),   A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038436376   ⟸   XM_038580448
- Peptide Label: isoform X6
- UniProtKB: A0A8C0L213 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038436372   ⟸   XM_038580444
- Peptide Label: isoform X2
- UniProtKB: A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038436371   ⟸   XM_038580443
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038436375   ⟸   XM_038580447
- Peptide Label: isoform X5
- UniProtKB: A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038436377   ⟸   XM_038580449
- Peptide Label: isoform X7
- UniProtKB: A0A8C0L2V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038436374   ⟸   XM_038580446
- Peptide Label: isoform X4
- UniProtKB: A0A8C0L213 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038436373   ⟸   XM_038580445
- Peptide Label: isoform X3
- UniProtKB: A0A8C0L1L3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845038006   ⟸   ENSCAFT00845048448
RefSeq Acc Id: ENSCAFP00845038292   ⟸   ENSCAFT00845048805
RefSeq Acc Id: ENSCAFP00845038180   ⟸   ENSCAFT00845048669

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000015800 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030016673 UniProtKB/TrEMBL
  ENSCAFG00040024175 UniProtKB/TrEMBL
  ENSCAFG00845027428 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000025057.6 UniProtKB/TrEMBL
  ENSCAFT00000046580.4 UniProtKB/TrEMBL
  ENSCAFT00000048838.3 UniProtKB/TrEMBL
  ENSCAFT00030039399.1 UniProtKB/TrEMBL
  ENSCAFT00030039645.1 UniProtKB/TrEMBL
  ENSCAFT00030039906.1 UniProtKB/TrEMBL
  ENSCAFT00030040101.1 UniProtKB/TrEMBL
  ENSCAFT00030040346.1 UniProtKB/TrEMBL
  ENSCAFT00030040474.1 UniProtKB/TrEMBL
  ENSCAFT00030040734.1 UniProtKB/TrEMBL
  ENSCAFT00030040885.1 UniProtKB/TrEMBL
  ENSCAFT00040047523.1 UniProtKB/TrEMBL
  ENSCAFT00845048448 ENTREZGENE
  ENSCAFT00845048448.1 UniProtKB/TrEMBL
  ENSCAFT00845048669 ENTREZGENE
  ENSCAFT00845048669.1 UniProtKB/TrEMBL
  ENSCAFT00845048805 ENTREZGENE
  ENSCAFT00845048805.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.820 UniProtKB/TrEMBL
  1.20.5.190 UniProtKB/TrEMBL
  1.20.58.530 UniProtKB/TrEMBL
  3.30.70.1590 UniProtKB/TrEMBL
  3.40.850.10 UniProtKB/TrEMBL
  Myosin VI head, motor domain, U50 subdomain UniProtKB/TrEMBL
InterPro Dilute_dom UniProtKB/TrEMBL
  IQ_motif_EF-hand-BS UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/TrEMBL
  Myo5a_CBD UniProtKB/TrEMBL
  Myosin_head_motor_dom UniProtKB/TrEMBL
  Myosin_N UniProtKB/TrEMBL
  MYSc_Myo5 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene MYO5A ENTREZGENE
PANTHER MYOSIN UniProtKB/TrEMBL
  UNCONVENTIONAL MYOSIN-VA UniProtKB/TrEMBL
Pfam DIL UniProtKB/TrEMBL
  Myosin_head UniProtKB/TrEMBL
  PF00612 UniProtKB/TrEMBL
PRINTS MYOSINHEAVY UniProtKB/TrEMBL
PROSITE DILUTE UniProtKB/TrEMBL
  MYOSIN_MOTOR UniProtKB/TrEMBL
  PS50096 UniProtKB/TrEMBL
  SH3_LIKE UniProtKB/TrEMBL
SMART DIL UniProtKB/TrEMBL
  MYSc UniProtKB/TrEMBL
  SM00015 UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8C0L1L3 ENTREZGENE
  A0A8C0L213 ENTREZGENE
  A0A8C0L2V9 ENTREZGENE
  A0A8C0NZU6_CANLF UniProtKB/TrEMBL
  A0A8C0P285_CANLF UniProtKB/TrEMBL
  A0A8C0P5X6_CANLF UniProtKB/TrEMBL
  A0A8C0P682_CANLF UniProtKB/TrEMBL
  A0A8C0P965_CANLF UniProtKB/TrEMBL
  A0A8C0P9U8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PH82 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RQG1_CANLF UniProtKB/TrEMBL
  A0A8I3PYC4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3Q296 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3SAU8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NHB0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0STK2 ENTREZGENE
  A0A8P0SVE6 ENTREZGENE
UniProt Secondary A0A8P0STK2 UniProtKB/TrEMBL
  A0A8P0SVE6 UniProtKB/TrEMBL
VGNC ID VGNC:43568 ENTREZGENE