MYRIP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 23 | 9,448,564 - 9,765,328 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 23 | 9,448,559 - 9,763,182 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 23 | 9,425,279 - 9,798,884 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 23 | 9,674,928 - 10,051,701 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 23 | 9,674,852 - 10,051,368 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 23 | 9,487,819 - 9,861,978 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 23 | 9,629,847 - 9,999,590 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 23 | 9,625,718 - 9,987,209 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
MYRIP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 3 | 39,808,914 - 40,260,321 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 39,808,914 - 40,260,321 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 39,850,405 - 40,301,812 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 39,826,307 - 40,276,816 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 39,826,306 - 40,276,808 | NCBI | | | | | Celera | 3 | 39,793,218 - 40,244,467 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | p22.1 | NCBI | | | | | HuRef | 3 | 39,894,694 - 40,345,886 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 39,802,159 - 40,251,713 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 39,822,295 - 40,275,401 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Myrip (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 9 | 120,132,996 - 120,305,167 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 120,130,579 - 120,303,907 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 120,303,520 - 120,476,101 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 120,301,513 - 120,474,841 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 120,213,191 - 120,383,952 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 120,152,771 - 120,323,532 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 120,765,412 - 120,944,453 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | F4 | NCBI | | | | | cM Map | 9 | 71.5 | NCBI | | | | |
|
Myrip (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 8 | 128,895,371 - 129,062,420 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 120,017,749 - 120,184,821 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 120,017,524 - 120,183,833 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 125,626,718 - 125,759,584 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 123,825,741 - 123,958,593 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 121,667,882 - 121,800,814 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 128,972,307 - 129,139,257 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 128,972,311 - 129,139,251 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 128,171,783 - 128,337,841 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 125,317,671 - 125,478,667 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 125,337,407 - 125,492,971 (+) | NCBI | | | | | Celera | 8 | 119,163,194 - 119,324,938 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q32 | NCBI | | | | |
|
Myrip (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955420 | 29,540,027 - 29,696,504 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955420 | 29,542,479 - 29,697,646 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
MYRIP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 2 | 39,771,353 - 40,219,420 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 39,776,213 - 40,224,181 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 39,715,890 - 40,163,826 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 39,991,586 - 40,435,763 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 40,079,777 - 40,433,613 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
Myrip (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 195,783,381 - 196,114,170 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936473 | 28,982,604 - 29,252,745 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936473 | 28,921,837 - 29,252,737 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
MYRIP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 24,347,660 - 24,556,735 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 24,347,574 - 24,556,743 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 26,806,466 - 26,855,152 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
MYRIP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 22 | 1,369,820 - 1,765,121 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 1,370,001 - 1,765,311 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 165,438,597 - 165,844,373 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Myrip (Heterocephalus glaber - naked mole-rat) |
|