IFT80 (intraflagellar transport 80) - Rat Genome Database

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Gene: IFT80 (intraflagellar transport 80) Canis lupus familiaris
Analyze
Symbol: IFT80
Name: intraflagellar transport 80
RGD ID: 12135114
Description: INVOLVED IN apoptotic process (ortholog); articular cartilage development (ortholog); bone development (ortholog); ASSOCIATED WITH Asphyxia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: intraflagellar transport 80 homolog; intraflagellar transport protein 80 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13426,332,456 - 26,455,428 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3430,374,586 - 30,497,664 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03426,388,720 - 26,512,021 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3426,387,471 - 26,511,904 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13426,318,615 - 26,441,864 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03426,279,456 - 26,402,532 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03426,519,525 - 26,642,618 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
apoptotic process  (IEA,ISO)
articular cartilage development  (IEA,ISO)
bone development  (IEA,ISO)
bone mineralization involved in bone maturation  (IEA,ISO)
bone morphogenesis  (IEA,ISO)
canonical NF-kappaB signal transduction  (IEA,ISO)
cartilage development  (IEA,ISO)
cartilage homeostasis  (IEA,ISO)
cell population proliferation  (IEA,ISO)
chondrocyte differentiation  (IEA,ISO)
cilium assembly  (IEA,ISO)
cilium organization  (IEA,ISO)
endochondral ossification  (IEA,ISO)
establishment or maintenance of cell polarity  (IEA,ISO)
fibroblast growth factor receptor signaling pathway  (IEA,ISO)
gene expression  (IEA,ISO)
growth plate cartilage chondrocyte differentiation  (IEA,ISO)
growth plate cartilage development  (IEA,ISO)
keratinocyte proliferation  (IEA,ISO)
limb development  (IEA,ISO)
multicellular organism growth  (IEA,ISO)
negative regulation of keratinocyte proliferation  (IEA,ISO)
negative regulation of non-canonical Wnt signaling pathway  (IEA,ISO)
non-canonical Wnt signaling pathway  (IEA,ISO)
non-motile cilium assembly  (IEA,ISO)
odontoblast differentiation  (IEA,ISO)
odontogenesis  (IEA,ISO)
ossification  (IEA,ISO)
osteoblast differentiation  (IEA,ISO)
osteoblast proliferation  (IEA,ISO)
osteoclast differentiation  (IEA,ISO)
phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IEA,ISO)
proteasomal protein catabolic process  (IEA,ISO)
protein stabilization  (IEA,ISO)
protein ubiquitination  (IEA,ISO)
receptor localization to non-motile cilium  (IEA,ISO)
response to inositol  (IEA,ISO)
skeletal system development  (IEA,ISO)
smoothened signaling pathway  (IEA,ISO)
spinal cord development  (IEA,ISO)
stem cell differentiation  (IEA,ISO)
stem cell proliferation  (IEA,ISO)
tissue development  (IEA,ISO)
tooth eruption  (IEA,ISO)

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
IFT80
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13426,332,456 - 26,455,428 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3430,374,586 - 30,497,664 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03426,388,720 - 26,512,021 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3426,387,471 - 26,511,904 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13426,318,615 - 26,441,864 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03426,279,456 - 26,402,532 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03426,519,525 - 26,642,618 (-)NCBIUU_Cfam_GSD_1.0
IFT80
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383160,256,986 - 160,399,225 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3160,256,986 - 160,399,880 (-)EnsemblGRCh38hg38GRCh38
GRCh373159,974,774 - 160,117,013 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363161,457,482 - 161,600,014 (-)NCBINCBI36Build 36hg18NCBI36
Celera3158,396,141 - 158,538,687 (-)NCBICelera
Cytogenetic Map3q25.33NCBI
HuRef3157,373,426 - 157,515,902 (-)NCBIHuRef
CHM1_13159,937,988 - 160,080,209 (-)NCBICHM1_1
T2T-CHM13v2.03163,031,586 - 163,173,837 (-)NCBIT2T-CHM13v2.0
Ift80
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39368,799,832 - 68,911,939 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl368,799,832 - 68,911,892 (-)EnsemblGRCm39 Ensembl
GRCm38368,892,499 - 69,004,680 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl368,892,499 - 69,004,570 (-)EnsemblGRCm38mm10GRCm38
MGSCv37368,696,421 - 68,808,492 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36368,980,431 - 69,092,394 (-)NCBIMGSCv36mm8
Celera369,005,128 - 69,112,374 (-)NCBICelera
Cytogenetic Map3E1NCBI
cM Map332.07NCBI
Ift80
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82155,455,773 - 155,550,082 (-)NCBIGRCr8
mRatBN7.22153,144,707 - 153,240,024 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2153,145,795 - 153,240,024 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2160,275,443 - 160,369,696 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02158,325,966 - 158,420,213 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02152,958,736 - 153,052,980 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02165,506,878 - 165,600,748 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2165,505,810 - 165,600,748 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02184,867,651 - 184,961,866 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42158,892,673 - 158,987,059 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12158,842,636 - 158,937,022 (-)NCBI
Celera2147,496,487 - 147,590,825 (-)NCBICelera
Cytogenetic Map2q32NCBI
Ift80
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495544810,808,940 - 10,819,655 (-)NCBIChiLan1.0ChiLan1.0
IFT80
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22158,193,564 - 158,335,974 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13158,198,280 - 158,340,492 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03157,279,076 - 157,421,478 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13165,327,511 - 165,469,795 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3165,329,056 - 165,454,905 (-)Ensemblpanpan1.1panPan2
Ift80
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560292,197,246 - 92,324,932 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936708238,268 - 362,519 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936708238,302 - 362,537 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IFT80
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1399,943,208 - 100,078,148 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11399,943,203 - 100,078,148 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213108,339,643 - 108,382,860 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IFT80
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11530,441,724 - 30,577,437 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1530,461,526 - 30,577,484 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660412,961,984 - 3,104,898 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ift80
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473038,003,902 - 38,144,277 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473038,003,437 - 38,144,312 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in IFT80
1268 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005639857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005639858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014110414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014110415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_545256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00845048138   ⟹   ENSCAFP00845037765
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3426,387,471 - 26,511,904 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845048217   ⟹   ENSCAFP00845037820
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3426,387,786 - 26,496,593 (-)Ensembl
RefSeq Acc Id: XM_005639857   ⟹   XP_005639914
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13426,332,456 - 26,455,124 (-)NCBI
Dog10K_Boxer_Tasha3430,374,586 - 30,497,264 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005639858   ⟹   XP_005639915
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13426,332,456 - 26,436,920 (-)NCBI
Dog10K_Boxer_Tasha3430,374,586 - 30,479,065 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014110415   ⟹   XP_013965890
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13426,332,456 - 26,455,425 (-)NCBI
Dog10K_Boxer_Tasha3430,374,586 - 30,497,487 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022414220   ⟹   XP_022269928
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13426,332,456 - 26,454,498 (-)NCBI
Dog10K_Boxer_Tasha3430,374,586 - 30,496,642 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038445928   ⟹   XP_038301856
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03426,388,720 - 26,512,021 (-)NCBI
RefSeq Acc Id: XM_038445929   ⟹   XP_038301857
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03426,388,720 - 26,511,796 (-)NCBI
RefSeq Acc Id: XM_038445930   ⟹   XP_038301858
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03426,388,720 - 26,511,167 (-)NCBI
RefSeq Acc Id: XM_038445931   ⟹   XP_038301859
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03426,388,720 - 26,493,593 (-)NCBI
RefSeq Acc Id: XM_038445933   ⟹   XP_038301861
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03426,388,720 - 26,512,017 (-)NCBI
RefSeq Acc Id: XM_038462934   ⟹   XP_038318862
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3430,374,586 - 30,497,664 (-)NCBI
RefSeq Acc Id: XM_038520124   ⟹   XP_038376052
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13426,318,615 - 26,441,691 (-)NCBI
RefSeq Acc Id: XM_038520125   ⟹   XP_038376053
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13426,318,615 - 26,441,464 (-)NCBI
RefSeq Acc Id: XM_038520126   ⟹   XP_038376054
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13426,318,615 - 26,440,842 (-)NCBI
RefSeq Acc Id: XM_038520127   ⟹   XP_038376055
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13426,318,615 - 26,441,864 (-)NCBI
RefSeq Acc Id: XM_038520128   ⟹   XP_038376056
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13426,318,615 - 26,423,277 (-)NCBI
RefSeq Acc Id: XM_038520129   ⟹   XP_038376057
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13426,318,615 - 26,441,687 (-)NCBI
RefSeq Acc Id: XM_038583754   ⟹   XP_038439682
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03426,519,525 - 26,642,423 (-)NCBI
RefSeq Acc Id: XM_038583755   ⟹   XP_038439683
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03426,519,525 - 26,642,211 (-)NCBI
RefSeq Acc Id: XM_038583756   ⟹   XP_038439684
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03426,519,525 - 26,641,589 (-)NCBI
RefSeq Acc Id: XM_038583757   ⟹   XP_038439685
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03426,519,525 - 26,642,618 (-)NCBI
RefSeq Acc Id: XM_038583758   ⟹   XP_038439686
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03426,519,525 - 26,624,012 (-)NCBI
RefSeq Acc Id: XM_038583759   ⟹   XP_038439687
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03426,519,525 - 26,642,419 (-)NCBI
RefSeq Acc Id: XM_038648167   ⟹   XP_038504095
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03426,279,456 - 26,402,346 (-)NCBI
RefSeq Acc Id: XM_038648168   ⟹   XP_038504096
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03426,279,456 - 26,402,130 (-)NCBI
RefSeq Acc Id: XM_038648169   ⟹   XP_038504097
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03426,279,456 - 26,401,508 (-)NCBI
RefSeq Acc Id: XM_038648170   ⟹   XP_038504098
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03426,279,456 - 26,402,532 (-)NCBI
RefSeq Acc Id: XM_038648171   ⟹   XP_038504099
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03426,279,456 - 26,383,931 (-)NCBI
RefSeq Acc Id: XM_038648172   ⟹   XP_038504100
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03426,279,456 - 26,402,343 (-)NCBI
RefSeq Acc Id: XM_545256   ⟹   XP_545256
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13426,332,456 - 26,455,427 (-)NCBI
Dog10K_Boxer_Tasha3430,374,586 - 30,497,491 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005639914 (Get FASTA)   NCBI Sequence Viewer  
  XP_005639915 (Get FASTA)   NCBI Sequence Viewer  
  XP_013965890 (Get FASTA)   NCBI Sequence Viewer  
  XP_022269928 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301856 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301857 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301858 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301859 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301861 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318862 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376052 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376053 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376054 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376055 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376056 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376057 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439682 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439683 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439684 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439685 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439686 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439687 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504095 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504096 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504097 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504098 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504099 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504100 (Get FASTA)   NCBI Sequence Viewer  
  XP_545256 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000020981.5
  ENSCAFP00000074033.1
  ENSCAFP00030024817.1
  ENSCAFP00040034960.1
  ENSCAFP00845037765.1
  ENSCAFP00845037820
  ENSCAFP00845037820.1
RefSeq Acc Id: XP_545256   ⟸   XM_545256
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8I3Q161 (UniProtKB/TrEMBL),   A0A8P0PQE3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005639914   ⟸   XM_005639857
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8I3Q161 (UniProtKB/TrEMBL),   A0A8P0PQE3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013965890   ⟸   XM_014110415
- Peptide Label: isoform X3
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8C0THV3 (UniProtKB/TrEMBL),   A0A8C0L4J9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005639915   ⟸   XM_005639858
- Peptide Label: isoform X2
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022269928   ⟸   XM_022414220
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8I3Q161 (UniProtKB/TrEMBL),   A0A8P0PQE3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038376055   ⟸   XM_038520127
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376052   ⟸   XM_038520124
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376057   ⟸   XM_038520129
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038376053   ⟸   XM_038520125
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376054   ⟸   XM_038520126
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376056   ⟸   XM_038520128
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038504098   ⟸   XM_038648170
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504095   ⟸   XM_038648167
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504100   ⟸   XM_038648172
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038504096   ⟸   XM_038648168
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504097   ⟸   XM_038648169
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504099   ⟸   XM_038648171
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038301856   ⟸   XM_038445928
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8I3Q161 (UniProtKB/TrEMBL),   A0A8P0PQE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301861   ⟸   XM_038445933
- Peptide Label: isoform X3
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8C0THV3 (UniProtKB/TrEMBL),   A0A8C0L4J9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301857   ⟸   XM_038445929
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8I3Q161 (UniProtKB/TrEMBL),   A0A8P0PQE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301858   ⟸   XM_038445930
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8I3Q161 (UniProtKB/TrEMBL),   A0A8P0PQE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301859   ⟸   XM_038445931
- Peptide Label: isoform X2
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318862   ⟸   XM_038462934
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8I3Q161 (UniProtKB/TrEMBL),   A0A8P0PQE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439685   ⟸   XM_038583757
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8I3Q161 (UniProtKB/TrEMBL),   A0A8P0PQE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439682   ⟸   XM_038583754
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8I3Q161 (UniProtKB/TrEMBL),   A0A8P0PQE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439687   ⟸   XM_038583759
- Peptide Label: isoform X3
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8C0L4J9 (UniProtKB/TrEMBL),   A0A8C0THV3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439683   ⟸   XM_038583755
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8I3Q161 (UniProtKB/TrEMBL),   A0A8P0PQE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439684   ⟸   XM_038583756
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL),   A0A8I3Q161 (UniProtKB/TrEMBL),   A0A8P0PQE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439686   ⟸   XM_038583758
- Peptide Label: isoform X2
- UniProtKB: A0A8C0L404 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845037765   ⟸   ENSCAFT00845048138
Ensembl Acc Id: ENSCAFP00845037820   ⟸   ENSCAFT00845048217


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000014222 UniProtKB/TrEMBL
  ENSCAFG00030015309 UniProtKB/TrEMBL
  ENSCAFG00040021506 UniProtKB/TrEMBL
  ENSCAFG00845027305 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000022596.5 UniProtKB/TrEMBL
  ENSCAFT00000096332.1 UniProtKB/TrEMBL
  ENSCAFT00030028444.1 UniProtKB/TrEMBL
  ENSCAFT00040040056.1 UniProtKB/TrEMBL
  ENSCAFT00845048138.1 UniProtKB/TrEMBL
  ENSCAFT00845048217 ENTREZGENE
  ENSCAFT00845048217.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.470 UniProtKB/TrEMBL
  2.130.10.10 UniProtKB/TrEMBL
InterPro Quinoprotein_ADH-like_supfam UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
  WD40_repeat UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
KEGG Report cfa:488132 UniProtKB/TrEMBL
NCBI Gene IFT80 ENTREZGENE
PANTHER INTRAFLAGELLAR TRANSPORT PROTEIN 80 HOMOLOG UniProtKB/TrEMBL
  OUTER SEGMENT 5 UniProtKB/TrEMBL
Pfam WD40 UniProtKB/TrEMBL
PROSITE WD_REPEATS_2 UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/TrEMBL
SMART WD40 UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/TrEMBL
  SSF50998 UniProtKB/TrEMBL
UniProt A0A8C0L404 ENTREZGENE
  A0A8C0L4J9 ENTREZGENE
  A0A8C0THV3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PTC2_CANLF UniProtKB/TrEMBL
  A0A8I3Q161 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PQE3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SIM5_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:111531 ENTREZGENE