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ONTOLOGY REPORT - ANNOTATIONS

Term:inflammatory response to wounding
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Accession:GO:0090594 term browser browse the term
Definition:The immediate defensive reaction by vertebrate tissue to injury caused by chemical or physical agents.


show annotations for term's descendants           Sort by:
inflammatory response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5 complement C5 acts_upstream_of_or_within ISO (PMID:21148255) RGD PMID:21148255 NCBI chr 3:18,270,696...18,361,994
Ensembl chr 3:18,270,696...18,361,994 		JBrowse link
G Ccr2 C-C motif chemokine receptor 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:24806994), (PMID:29632244)		 UniProt
RGD		 PMID:24806994 PMID:29632244 GO_REF:0000024 NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100 		JBrowse link
G Cfh complement factor H acts_upstream_of_or_within ISO (PMID:21148255) RGD PMID:21148255 NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838 		JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:27830702) RGD PMID:27830702 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISO
IEA		 (PMID:27830702)
GO_REF:0000107		 RGD
Ensembl		 PMID:27830702 GO_REF:0000107 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:26776679) RGD PMID:26776679 NCBI chr11:44,782,676...44,810,722
Ensembl chr11:44,782,676...44,810,723 		JBrowse link
G Tlr3 toll-like receptor 3 involved_in ISO (PMID:27830702) RGD PMID:27830702 NCBI chr16:46,821,980...46,837,900
Ensembl chr16:46,822,039...46,836,545 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:27830702) RGD PMID:27830702 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Wdr83 WD repeat domain 83 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4367006 (PMID:25550320), (PMID:29402223)		 Ensembl
RGD		 PMID:25550320 PMID:29402223 GO_REF:0000107 NCBI chr19:23,076,948...23,082,569
Ensembl chr19:23,077,010...23,082,563 		JBrowse link
connective tissue replacement involved in inflammatory response wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec10a C-type lectin domain containing 10A acts_upstream_of_or_within ISO MGI:2183546 (PMID:15784728) RGD PMID:15784728 NCBI chr10:54,876,244...54,880,439
Ensembl chr10:54,876,260...54,880,435 		JBrowse link
G F2r coagulation factor II (thrombin) receptor involved_in ISO
ISS
IEA		 (PMID:9639571)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:9639571 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:18037992)		 Ensembl
RGD		 PMID:18037992 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Il1a interleukin 1 alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15784728)		 Ensembl
RGD		 PMID:15784728 GO_REF:0000107 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 acts_upstream_of_or_within ISO (PMID:23100531) RGD PMID:23100531 NCBI chr  X:1,212,969...1,217,714
Ensembl chr  X:1,212,972...1,217,664 		JBrowse link
negative regulation of connective tissue replacement involved in inflammatory response wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within IDA PMID:29695452 BHF-UCL PMID:29695452 RGD:150521636 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
negative regulation of inflammatory response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISO UniProtKB:Q80ZE3|UniProtKB:Q96LC7 (PMID:19264983) RGD PMID:19264983 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Extl3 exostosin-like glycosyltransferase 3 involved_in ISO (PMID:27830702) RGD PMID:27830702 NCBI chr15:39,294,033...39,384,086
Ensembl chr15:39,293,605...39,338,898 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:32460388)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:32460388 GO_REF:0000024 GO_REF:0000107 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373 		JBrowse link
G Il17a interleukin 17A involved_in IEA
ISO		 GO_REF:0000107
(PMID:27830702)		 Ensembl
RGD		 PMID:27830702 GO_REF:0000107 NCBI chr 9:23,144,402...23,147,889
Ensembl chr 9:23,144,402...23,147,889 		JBrowse link
G Il33 interleukin 33 involved_in ISO
IEA		 (PMID:27830702)
GO_REF:0000107		 RGD
Ensembl		 PMID:27830702 GO_REF:0000107 NCBI chr 1:227,701,964...227,736,374
Ensembl chr 1:227,721,435...227,736,373 		JBrowse link
G Mdk midkine involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17015789)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17015789 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 involved_in ISO
IEA		 (PMID:27830702)
GO_REF:0000107		 RGD
Ensembl		 PMID:27830702 GO_REF:0000107 NCBI chr 4:157,526,034...157,550,783
Ensembl chr 4:157,526,035...157,550,984 		JBrowse link
G Reg3b regenerating family member 3 beta involved_in ISO (PMID:27830702) RGD PMID:27830702 NCBI chr 4:110,861,775...110,865,015
Ensembl chr 4:110,861,775...110,865,015 		JBrowse link
G Reg3g regenerating family member 3 gamma involved_in ISO (PMID:27830702) RGD PMID:27830702 NCBI chr 4:110,922,805...110,927,803
Ensembl chr 4:110,924,168...110,926,723 		JBrowse link
G Siglec10 sialic acid binding Ig-like lectin 10 involved_in ISO UniProtKB:P24807 (PMID:19264983) RGD PMID:19264983 NCBI chr 1:93,817,301...93,826,376
Ensembl chr 1:93,817,335...93,825,931 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO
IEA		 (PMID:27830702)
GO_REF:0000107		 RGD
Ensembl		 PMID:27830702 GO_REF:0000107 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
positive regulation of inflammatory response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISO (PMID:19264983) RGD PMID:19264983 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Grn granulin precursor involved_in ISS
ISO		 GO_REF:0000024
(PMID:12524533)		 UniProt
RGD		 PMID:12524533 GO_REF:0000024 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775 		JBrowse link
G Mdk midkine involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24458438), (PMID:28183532)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24458438 PMID:28183532 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
regulation of inflammatory response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:28965882)		 Ensembl
UniProt
RGD		 PMID:28965882 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743 		JBrowse link
wound healing involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule acts_upstream_of_or_within ISO MGI:2181292 (PMID:11935029) RGD PMID:11935029 NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620 		JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO
IEA		 (PMID:9884342)
GO_REF:0000107		 RGD
Ensembl		 PMID:9884342 GO_REF:0000107 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within_negative_effect ISO (PMID:21880694) RGD PMID:21880694 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Tlr4 toll-like receptor 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21880694)		 Ensembl
RGD		 PMID:21880694 GO_REF:0000107 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20069
    response to stimulus 10792
      response to stress 4256
        response to wounding 622
          inflammatory response to wounding 32
            negative regulation of inflammatory response to wounding 11
            positive regulation of inflammatory response to wounding 3
            regulation of inflammatory response to wounding + 13
            wound healing involved in inflammatory response + 10
Path 2
Term Annotations click to browse term
  biological_process 20069
    response to stimulus 10792
      response to stress 4256
        defense response 1908
          inflammatory response 878
            inflammatory response to wounding 32
              negative regulation of inflammatory response to wounding 11
              positive regulation of inflammatory response to wounding 3
              regulation of inflammatory response to wounding + 13
              wound healing involved in inflammatory response + 10
paths to the root