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ONTOLOGY REPORT - ANNOTATIONS

Term:aminoglycan metabolic process
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Accession:GO:0006022 term browser browse the term
Definition:The chemical reactions and pathways involving aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.
Synonyms:exact_synonym: aminoglycan metabolism


show annotations for term's descendants           Sort by:
chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHI3L1 chitinase 3 like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:25,620...32,954
Ensembl chr 7:26,316...33,427 		JBrowse link
G CHIA chitinase acidic involved_in ISO
IBA
IEA		 RGD
GO_Central
UniProt
Ensembl		 PMID:11085997 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:5000759 NCBI chr 6:40,754,906...40,766,779
Ensembl chr 6:40,754,993...40,766,891 		JBrowse link
G CTBS chitobiase involved_in ISO
IBA
IEA		 RGD
GO_Central
UniProt		 PMID:2751306 GO_REF:0000033 GO_REF:0000117 RGD:2301430 NCBI chr 6:63,308,013...63,342,697
Ensembl chr 6:63,308,420...63,342,266 		JBrowse link
G GNG5 G protein subunit gamma 5 involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:63,389,991...63,398,797
Ensembl chr12:3,966,947...3,967,377 		JBrowse link
G OVGP1 oviductal glycoprotein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:63,955,766...63,985,878
Ensembl chr17:63,957,251...63,983,421 		JBrowse link
chondroitin sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT6 beta-1,3-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,421,687...56,423,120
Ensembl chr 5:56,405,372...56,422,771 		JBrowse link
G B3GAT1 beta-1,3-glucuronyltransferase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:741,231...747,641
Ensembl chr 5:745,747...748,899 		JBrowse link
G B3GAT2 beta-1,3-glucuronyltransferase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:33,321,691...33,400,516
Ensembl chr12:33,321,208...33,401,171 		JBrowse link
G B3GAT3 beta-1,3-glucuronyltransferase 3 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:21763480) MGI
GO_Central
Ensembl		 PMID:21763480 GO_REF:0000033 GO_REF:0000107 NCBI chr18:54,020,547...54,025,264
Ensembl chr18:54,020,736...54,024,910 		JBrowse link
G CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21138417) Ensembl
MGI		 PMID:21138417 GO_REF:0000107 NCBI chr28:3,878,049...3,944,654
Ensembl chr28:3,879,258...3,907,222 		JBrowse link
G CYTL1 cytokine like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17644814) Ensembl
MGI		 PMID:17644814 GO_REF:0000107 NCBI chr 3:70,354,099...70,358,521
Ensembl chr 3:70,354,090...70,359,128 		JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:17644814) MGI PMID:17644814 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794 		JBrowse link
G PXYLP1 2-phosphoxylose phosphatase 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr23:37,145,065...37,197,808
Ensembl chr23:37,145,086...37,196,427 		JBrowse link
G XYLT1 xylosyltransferase 1 involved_in ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:26,742,853...27,041,666
Ensembl chr 6:26,742,853...27,041,666 		JBrowse link
G XYLT2 xylosyltransferase 2 involved_in ISS
IEA
IBA		 UniProt
Ensembl
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:26,316,812...26,329,333
Ensembl chr 9:26,316,774...26,329,511 		JBrowse link
chondroitin sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUSB glucuronidase beta involved_in ISO (PMID:23897660) MGI PMID:23897660 NCBI chr 6:730,345...743,916
Ensembl chr 6:730,358...779,424 		JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,221,809...57,248,432
Ensembl chr 2:57,222,186...57,248,417 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in ISO (PMID:22451654) MGI PMID:22451654 NCBI chr20:39,035,924...39,040,443
Ensembl chr20:39,038,514...39,040,368 		JBrowse link
G HYAL4 hyaluronidase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23086929) Ensembl
MGI		 PMID:23086929 GO_REF:0000107 NCBI chr14:11,736,208...11,743,848 JBrowse link
glycosaminoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:45,141,870...45,159,255
Ensembl chr18:45,142,586...45,159,255 		JBrowse link
G B3GALT6 beta-1,3-galactosyltransferase 6 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:11551958) Ensembl
GO_Central
MGI		 PMID:11551958 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:56,421,687...56,423,120
Ensembl chr 5:56,405,372...56,422,771 		JBrowse link
G B3GAT1 beta-1,3-glucuronyltransferase 1 involved_in ISO (PMID:12032138), (PMID:26659409) MGI PMID:12032138 PMID:26659409 NCBI chr 5:741,231...747,641
Ensembl chr 5:745,747...748,899 		JBrowse link
G B3GAT3 beta-1,3-glucuronyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,020,547...54,025,264
Ensembl chr18:54,020,736...54,024,910 		JBrowse link
G B4GALT7 beta-1,4-galactosyltransferase 7 involved_in ISO (PMID:10438455)
(PMID:33208938)
(PMID:20809901)		 UniProt
MGI		 PMID:10438455 PMID:20809901 PMID:33208938 NCBI chr11:3,497,860...3,507,513
Ensembl chr11:3,498,153...3,505,034 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469 		JBrowse link
G EXT2 exostosin glycosyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:44,987,310...45,122,339
Ensembl chr18:44,987,748...45,129,974 		JBrowse link
G HAS1 hyaluronan synthase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:105,376,091...105,386,043
Ensembl chr 1:105,376,536...105,385,134 		JBrowse link
G HAS2 hyaluronan synthase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr13:20,310,946...20,342,647
Ensembl chr13:20,309,872...20,341,636 		JBrowse link
G HAS3 hyaluronan synthase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr 5:80,520,261...80,530,769
Ensembl chr 5:80,520,261...80,529,434 		JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:35,836,788...35,862,525 JBrowse link
G HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:68,306,512...68,336,879 JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 involved_in ISO (PMID:9988768) UniProt PMID:9988768 NCBI chr 6:22,814,966...22,905,633
Ensembl chr 6:22,815,738...22,906,537 		JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:37,400,144...37,494,154
Ensembl chr 5:37,400,279...37,494,089 		JBrowse link
G LOC489516 heparan sulfate glucosamine 3-O-sulfotransferase 3B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:38,023,858...38,066,548
Ensembl chr 5:38,023,684...38,065,487 		JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO RGD PMID:11903042 RGD:1581762 NCBI chr 4:58,925,922...58,963,639
Ensembl chr 4:58,926,351...58,962,283 		JBrowse link
G PXYLP1 2-phosphoxylose phosphatase 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr23:37,145,065...37,197,808
Ensembl chr23:37,145,086...37,196,427 		JBrowse link
G SMIM14 small integral membrane protein 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:72,839,897...72,934,335
Ensembl chr 3:72,839,920...72,963,208 		JBrowse link
G TANGO6 transport and golgi organization 6 homolog involved_in IEA UniProt GO_REF:0000117 NCBI chr 5:80,548,809...80,748,408
Ensembl chr 5:80,532,865...80,748,563 		JBrowse link
G UGDH UDP-glucose 6-dehydrogenase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:72,935,532...72,964,151
Ensembl chr 3:72,839,920...72,963,208 		JBrowse link
G XYLT1 xylosyltransferase 1 involved_in ISO (PMID:24161523) MGI PMID:24161523 NCBI chr 6:26,742,853...27,041,666
Ensembl chr 6:26,742,853...27,041,666 		JBrowse link
G XYLT2 xylosyltransferase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17517600) MGI
Ensembl		 PMID:17517600 GO_REF:0000107 NCBI chr 9:26,316,812...26,329,333
Ensembl chr 9:26,316,774...26,329,511 		JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HYAL2 hyaluronidase 2 involved_in ISO (PMID:9712871) UniProt PMID:9712871 NCBI chr20:39,029,426...39,034,451
Ensembl chr20:39,031,735...39,034,130 		JBrowse link
G IDS iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:117,490,749...117,515,566
Ensembl chr  X:117,491,548...117,515,496 		JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:16979922), (PMID:22580166)
(PMID:19751987)
(PMID:19834056)
(PMID:21873421)		 RGD
MGI		 PMID:6138357 PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 More... RGD:1599427 NCBI chr 3:91,517,225...91,534,593
Ensembl chr 3:91,522,035...91,534,593 		JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11278811) Ensembl
MGI		 PMID:11278811 GO_REF:0000107 NCBI chr21:33,716,138...33,727,470
Ensembl chr21:33,716,581...33,727,297 		JBrowse link
G SGSH N-sulfoglucosamine sulfohydrolase involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:1,540,933...1,547,029
Ensembl chr 9:1,540,932...1,547,029 		JBrowse link
glycosaminoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN6 CLN6 transmembrane ER protein involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr30:32,246,394...32,264,251
Ensembl chr30:32,246,411...32,264,240 		JBrowse link
G FOXC1 forkhead box C1 acts_upstream_of_or_within ISO (PMID:4269479) MGI PMID:4269479
G GNS glucosamine (N-acetyl)-6-sulfatase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr10:7,363,628...7,415,618
Ensembl chr10:7,366,247...7,507,270 		JBrowse link
G HEXA hexosaminidase subunit alpha involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:8896570) Ensembl
GO_Central
MGI		 PMID:8896570 GO_REF:0000033 GO_REF:0000107 NCBI chr30:35,836,788...35,862,525 JBrowse link
G HEXB hexosaminidase subunit beta involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:8896570) Ensembl
GO_Central
MGI		 PMID:8896570 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:57,221,809...57,248,432
Ensembl chr 2:57,222,186...57,248,417 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19632871), (PMID:25524704), (PMID:29180785) Ensembl
MGI		 PMID:19632871 PMID:25524704 PMID:29180785 GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056 		JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16020517) Ensembl
MGI		 PMID:16020517 GO_REF:0000107 NCBI chr 4:58,580,231...58,639,750
Ensembl chr 4:58,532,148...58,640,191 		JBrowse link
hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC5 ATP binding cassette subfamily C member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:16,856,624...16,947,844
Ensembl chr34:16,856,633...16,946,422 		JBrowse link
G CCND3 cyclin D3 ISO RGD PMID:19276076 RGD:2316018 NCBI chr12:10,593,786...10,688,304
Ensembl chr12:10,594,712...10,600,891 		JBrowse link
G HAS1 hyaluronan synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:10617644) MGI
GO_Central		 PMID:10617644 GO_REF:0000033 NCBI chr 1:105,376,091...105,386,043
Ensembl chr 1:105,376,536...105,385,134 		JBrowse link
G HAS2 hyaluronan synthase 2 involved_in IEA
IBA		 Ensembl
GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr13:20,310,946...20,342,647
Ensembl chr13:20,309,872...20,341,636 		JBrowse link
G HAS3 hyaluronan synthase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9060470) Ensembl
MGI		 PMID:9060470 GO_REF:0000107 NCBI chr 5:80,520,261...80,530,769
Ensembl chr 5:80,520,261...80,529,434 		JBrowse link
G IL1B interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,019,329...37,033,388
Ensembl chr17:37,019,329...37,024,458 		JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 involved_in ISO (PMID:17324121) UniProt PMID:17324121 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G CD44 CD44 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:32,735,493...32,826,483
Ensembl chr18:32,737,907...32,827,107 		JBrowse link
G CEMIP cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,726,605...56,786,176
Ensembl chr 3:56,726,493...56,876,026 		JBrowse link
G CEMIP2 cell migration inducing hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:85,944,255...86,020,955
Ensembl chr 1:85,945,557...86,019,195 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) UniProt PMID:19577615 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G GUSB glucuronidase beta involved_in ISO (PMID:20385825) MGI PMID:20385825 NCBI chr 6:730,345...743,916
Ensembl chr 6:730,358...779,424 		JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:35,836,788...35,862,525 JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,221,809...57,248,432
Ensembl chr 2:57,222,186...57,248,417 		JBrowse link
G HMMR hyaluronan mediated motility receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:47,743,576...47,786,982
Ensembl chr 4:47,744,433...47,786,987 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:39,035,924...39,040,443
Ensembl chr20:39,038,514...39,040,368 		JBrowse link
G HYAL2 hyaluronidase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:39,029,426...39,034,451
Ensembl chr20:39,031,735...39,034,130 		JBrowse link
G HYAL3 hyaluronidase 3 involved_in ISO (PMID:12084718), (PMID:21699545)
(PMID:20586096)		 UniProt PMID:12084718 PMID:20586096 PMID:21699545 NCBI chr20:39,041,940...39,047,388
Ensembl chr20:39,042,070...39,047,365 		JBrowse link
G HYAL4 hyaluronidase 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:11,736,208...11,743,848 JBrowse link
G LOC609321 hyaluronidase-1-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:11,760,666...11,770,147 JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:33,716,138...33,727,470
Ensembl chr21:33,716,581...33,727,297 		JBrowse link
G SPAM1 sperm adhesion molecule 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:11,704,766...11,723,187
Ensembl chr14:11,704,757...11,712,570 		JBrowse link
G STAB2 stabilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:42,187,074...42,328,874
Ensembl chr15:42,187,790...42,328,883 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA		 AgBase
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
hyaluronan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEMIP cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,726,605...56,786,176
Ensembl chr 3:56,726,493...56,876,026 		JBrowse link
G HAS2 hyaluronan synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21246657) Ensembl
MGI		 PMID:21246657 GO_REF:0000107 NCBI chr13:20,310,946...20,342,647
Ensembl chr13:20,309,872...20,341,636 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in ISO (PMID:19478093) UniProt PMID:19478093 NCBI chr20:39,035,924...39,040,443
Ensembl chr20:39,038,514...39,040,368 		JBrowse link
G IL15 interleukin 15 ISO RGD PMID:17667861 RGD:5013835 NCBI chr19:1,339,607...1,364,762
Ensembl chr19:1,339,967...1,364,762 		JBrowse link
G ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:37,038,070...37,051,866
Ensembl chr20:37,038,070...37,052,675 		JBrowse link
G ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:28,367,842...28,403,610
Ensembl chr 2:28,367,908...28,403,667 		JBrowse link
G ITIH3 inter-alpha-trypsin inhibitor heavy chain 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:37,032,485...37,035,941 JBrowse link
G ITIH4 inter-alpha-trypsin inhibitor heavy chain 4 involved_in IEA InterPro GO_REF:0000002
G ITIH5 inter-alpha-trypsin inhibitor heavy chain 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:28,437,907...28,507,008
Ensembl chr 2:28,441,056...28,506,966 		JBrowse link
G LOC102154212 inter-alpha-trypsin inhibitor heavy chain H1-like involved_in IEA InterPro GO_REF:0000002
G TNFAIP6 TNF alpha induced protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,607,598...52,623,799
Ensembl chr19:52,607,713...52,623,811 		JBrowse link
negative regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP2A1 adaptor related protein complex 2 subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,752,326...106,784,803
Ensembl chr 1:106,751,800...106,784,663 		JBrowse link
G B9D2 B9 domain containing 2 involved_in ISO (PMID:17324121) UniProt PMID:17324121 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G CLTC clathrin heavy chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,116,344...34,183,023
Ensembl chr 9:34,116,634...34,182,719 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22383528) Ensembl
MGI		 PMID:22383528 GO_REF:0000107 NCBI chr 5:81,089,657...81,172,173
Ensembl chr 5:81,142,888...81,172,189 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA		 AgBase
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
obsolete chondroitin sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHPF chondroitin polymerizing factor involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:22952769)
(PMID:22952873)		 Ensembl
GO_Central
MGI		 PMID:22952769 PMID:22952873 GO_REF:0000033 GO_REF:0000107 NCBI chr37:26,048,236...26,052,871
Ensembl chr37:26,025,993...26,052,806 		JBrowse link
G CHPF2 chondroitin polymerizing factor 2 involved_in IBA GO_Central GO_REF:0000033
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10722746)
(PMID:21138417)		 Ensembl
MGI		 PMID:10722746 PMID:21138417 GO_REF:0000107 NCBI chr10:33,555,629...33,810,808
Ensembl chr10:33,555,628...33,810,558 		JBrowse link
G CHST12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:14,702,493...14,713,440
Ensembl chr 6:14,705,427...14,706,686 		JBrowse link
G CHST13 carbohydrate sulfotransferase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:723,380...746,935 JBrowse link
G CHST13 carbohydrate sulfotransferase 13 involved_in IEA Ensembl GO_REF:0000107
G CHST3 carbohydrate sulfotransferase 3 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:11696535)
(PMID:9597547)		 RGD
MGI
GO_Central
Ensembl		 PMID:9597547 PMID:11696535 PMID:16495484 GO_REF:0000033 GO_REF:0000107 RGD:1600854 NCBI chr 4:22,668,430...22,699,157
Ensembl chr 4:22,691,336...22,694,254 		JBrowse link
G CHST7 carbohydrate sulfotransferase 7 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:40,209,884...40,239,077
Ensembl chr  X:40,210,096...40,211,556 		JBrowse link
G CHSY1 chondroitin sulfate synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:11514575)
(PMID:22952769)		 MGI
GO_Central
Ensembl		 PMID:11514575 PMID:22952769 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:39,844,227...39,916,484
Ensembl chr 3:39,844,195...40,021,573 		JBrowse link
G CHSY3 chondroitin sulfate synthase 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:18,621,196...18,855,018
Ensembl chr11:18,620,781...18,854,177 		JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:22,219,324...22,546,501
Ensembl chr16:22,219,861...22,392,937 		JBrowse link
G CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr28:3,878,049...3,944,654
Ensembl chr28:3,879,258...3,907,222 		JBrowse link
G GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25107907) MGI
Ensembl		 PMID:25107907 GO_REF:0000107 NCBI chr36:10,895,366...10,990,848
Ensembl chr36:10,896,128...10,919,000 		JBrowse link
G SLC35B2 solute carrier family 35 member B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,665,810...12,667,966
Ensembl chr12:12,664,871...12,668,484 		JBrowse link
G SLC35D1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO (PMID:17952091) MGI PMID:17952091 NCBI chr 5:43,474,641...43,522,237
Ensembl chr 5:43,474,674...43,522,042 		JBrowse link
G SMIM14 small integral membrane protein 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:72,839,897...72,934,335
Ensembl chr 3:72,839,920...72,963,208 		JBrowse link
G UGDH UDP-glucose 6-dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:72,935,532...72,964,151
Ensembl chr 3:72,839,920...72,963,208 		JBrowse link
G XYLT1 xylosyltransferase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:26,742,853...27,041,666
Ensembl chr 6:26,742,853...27,041,666 		JBrowse link
G XYLT2 xylosyltransferase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 9:26,316,812...26,329,333
Ensembl chr 9:26,316,774...26,329,511 		JBrowse link
obsolete chondroitin sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18695242)
(PMID:18539921)		 Ensembl
MGI		 PMID:18539921 PMID:18695242 GO_REF:0000107 NCBI chr29:8,176,977...8,215,561
Ensembl chr29:8,182,508...8,215,868 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chr10:33,555,629...33,810,808
Ensembl chr10:33,555,628...33,810,558 		JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20812917)
(PMID:21148564)		 Ensembl
MGI		 PMID:20812917 PMID:21148564 GO_REF:0000107 NCBI chr16:22,219,324...22,546,501
Ensembl chr16:22,219,861...22,392,937 		JBrowse link
G DSE dermatan sulfate epimerase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:56,787,809...56,868,037
Ensembl chr 1:56,787,256...56,867,716 		JBrowse link
G DSEL dermatan sulfate epimerase like acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:22496542) MGI
GO_Central		 PMID:22496542 GO_REF:0000033 NCBI chr 1:10,344,468...10,366,936 JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32201365) Ensembl
MGI		 PMID:32201365 GO_REF:0000107 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469 		JBrowse link
obsolete chondroitin sulfate proteoglycan biosynthetic process, chain elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHPF chondroitin polymerizing factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:26,048,236...26,052,871
Ensembl chr37:26,025,993...26,052,806 		JBrowse link
G CHSY1 chondroitin sulfate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,844,227...39,916,484
Ensembl chr 3:39,844,195...40,021,573 		JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,219,324...22,546,501
Ensembl chr16:22,219,861...22,392,937 		JBrowse link
obsolete dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:14,702,493...14,713,440
Ensembl chr 6:14,705,427...14,706,686 		JBrowse link
G CHST14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within ISO (PMID:11470797) MGI PMID:11470797 NCBI chr30:7,640,988...7,643,576
Ensembl chr30:7,640,637...7,642,778 		JBrowse link
G DSE dermatan sulfate epimerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:56,787,809...56,868,037
Ensembl chr 1:56,787,256...56,867,716 		JBrowse link
G UST uronyl 2-sulfotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:39,633,276...39,922,361
Ensembl chr 1:39,633,501...39,921,289 		JBrowse link
obsolete dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSE dermatan sulfate epimerase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:56,787,809...56,868,037
Ensembl chr 1:56,787,256...56,867,716 		JBrowse link
G DSEL dermatan sulfate epimerase like acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:22496542) MGI
GO_Central		 PMID:22496542 GO_REF:0000033 NCBI chr 1:10,344,468...10,366,936 JBrowse link
peptidoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LYG1 lysozyme g1 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:43,407,780...43,419,610
Ensembl chr10:43,408,598...43,419,765 		JBrowse link
G LYG2 lysozyme g2 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:43,458,359...43,470,792
Ensembl chr10:43,458,176...43,468,290 		JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:109,614,404...109,618,242
Ensembl chr 1:109,614,437...109,618,242 		JBrowse link
G PGLYRP2 peptidoglycan recognition protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:46,724,906...46,730,227
Ensembl chr20:46,726,224...46,730,321 		JBrowse link
poly-N-acetyllactosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr10:62,170,262...62,239,010
Ensembl chr10:62,145,117...62,146,310
Ensembl chr10:62,145,117...62,146,310 		JBrowse link
G B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr20:45,075,146...45,093,480
Ensembl chr20:45,076,403...45,080,942 		JBrowse link
G B3GNT4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr26:7,145,120...7,147,732
Ensembl chr26:7,145,262...7,146,335 		JBrowse link
G B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:21,693,069...21,694,140
Ensembl chr21:21,692,944...21,694,425 		JBrowse link
G B3GNT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr25:43,287,937...43,293,416 JBrowse link
G B3GNT8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:112,576,992...112,579,104 JBrowse link
G B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:82,212,940...82,215,918
Ensembl chr 5:82,212,922...82,214,679 		JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20417617) Ensembl
MGI		 PMID:20417617 GO_REF:0000107 NCBI chr24:36,220,973...36,241,482
Ensembl chr24:36,221,189...36,300,804 		JBrowse link
G B4GAT1 beta-1,4-glucuronyltransferase 1 NOT|involved_in ISO (PMID:25279697), (PMID:25279699) UniProt PMID:25279697 PMID:25279699 NCBI chr18:50,964,645...50,966,924
Ensembl chr18:50,964,131...50,966,264 		JBrowse link
positive regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGF epidermal growth factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:30,073,541...30,166,904
Ensembl chr32:30,073,950...30,166,295 		JBrowse link
G HAS2 hyaluronan synthase 2 ISO RGD PMID:12186949 PMID:17080198 RGD:9588629 RGD:9588632 NCBI chr13:20,310,946...20,342,647
Ensembl chr13:20,309,872...20,341,636 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:23,948,598...24,040,704
Ensembl chr32:23,942,954...24,040,703 		JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:25,798,877...25,819,422
Ensembl chr10:25,798,938...25,817,746 		JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:17080198 RGD:9588632 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358 		JBrowse link
regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22383528) Ensembl
MGI		 PMID:22383528 GO_REF:0000107 NCBI chr 5:81,089,657...81,172,173
Ensembl chr 5:81,142,888...81,172,189 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22121
    cellular process 21652
      metabolic process 15394
        carbohydrate derivative metabolic process 1025
          aminoglycan metabolic process 106
            aminoglycan biosynthetic process + 64
            aminoglycan catabolic process + 30
            chitin metabolic process + 5
            glycosaminoglycan metabolic process + 92
            poly-N-acetyllactosamine metabolic process + 9
paths to the root