LYVE1 (lymphatic vessel endothelial hyaluronan receptor 1)

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Gene: LYVE1 (lymphatic vessel endothelial hyaluronan receptor 1) Canis lupus familiaris

Analyze

Symbol:

LYVE1

Name:

lymphatic vessel endothelial hyaluronan receptor 1

RGD ID:

12066705

Description:

ENCODES a protein that exhibits cargo receptor activity (inferred); hyaluronic acid binding (inferred); transmembrane signaling receptor activity (inferred); INVOLVED IN glycosaminoglycan catabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cell periphery (inferred); membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

extracellular link domain containing 1; lymphatic vessel endothelial hyaluronic acid receptor 1; XLKD1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	33,716,138 - 33,727,470 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	33,716,581 - 33,727,297 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	33,281,339 - 33,292,627 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	34,593,113 - 34,604,407 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	34,593,119 - 34,611,630 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	33,854,083 - 33,864,902 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	34,024,281 - 34,035,563 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	34,316,909 - 34,328,196 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

hepatocellular carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell adhesion (IEA)

glycosaminoglycan catabolic process (IEA,ISO)

hyaluronan catabolic process (IEA)

positive regulation of cellular extravasation (IEA)

receptor-mediated endocytosis (IEA)

Cellular Component

cell periphery (IEA)

membrane (IEA)

plasma membrane (IEA)

Molecular Function

cargo receptor activity (IEA)

hyaluronic acid binding (IEA)

protein binding (ISO)

transmembrane signaling receptor activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:24593773	PMID:30032202

Genomics

Comparative Map Data

LYVE1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	33,716,138 - 33,727,470 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	33,716,581 - 33,727,297 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	33,281,339 - 33,292,627 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	34,593,113 - 34,604,407 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	34,593,119 - 34,611,630 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	33,854,083 - 33,864,902 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	34,024,281 - 34,035,563 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	34,316,909 - 34,328,196 (-)	NCBI		UU_Cfam_GSD_1.0

LYVE1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	10,556,966 - 10,568,665 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	10,556,966 - 10,611,689 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	10,578,513 - 10,590,212 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	10,535,989 - 10,546,941 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	10,700,953 - 10,711,906 (-)	NCBI		Celera
Cytogenetic Map	11	p15.4	NCBI
HuRef	11	10,251,901 - 10,262,854 (-)	NCBI		HuRef
CHM1_1	11	10,577,487 - 10,589,311 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	10,641,492 - 10,653,192 (-)	NCBI		T2T-CHM13v2.0

Lyve1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	110,449,814 - 110,462,160 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	110,449,814 - 110,462,446 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	110,850,607 - 110,862,953 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	110,850,607 - 110,863,239 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	117,994,121 - 118,006,467 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	110,641,788 - 110,654,134 (-)	NCBI		MGSCv36	mm8
Celera	7	110,824,675 - 110,837,013 (-)	NCBI		Celera
Cytogenetic Map	7	E3	NCBI
cM Map	7	57.89	NCBI

Lyve1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	174,393,387 - 174,410,977 (-)	NCBI		GRCr8
mRatBN7.2	1	164,962,872 - 164,976,309 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	164,962,872 - 164,976,309 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	173,300,489 - 173,313,952 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	180,486,516 - 180,499,979 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	173,170,908 - 173,184,358 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	175,663,266 - 175,676,699 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	175,663,266 - 175,676,699 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	182,650,925 - 182,664,312 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	168,601,460 - 168,622,234 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	168,712,104 - 168,732,625 (-)	NCBI
Celera	1	162,853,590 - 162,866,975 (-)	NCBI		Celera
Cytogenetic Map	1	q33	NCBI

Lyve1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955414	26,160,605 - 26,175,891 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955414	26,161,768 - 26,175,621 (-)	NCBI	ChiLan1.0	ChiLan1.0

LYVE1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	12,994,134 - 13,011,465 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	12,956,484 - 12,973,381 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	10,690,086 - 10,702,785 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	10,417,223 - 10,428,170 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	10,417,223 - 10,428,170 (-)	Ensembl	panpan1.1		panPan2

Lyve1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	51,754,473 - 51,768,804 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936528	7,788,352 - 7,802,902 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936528	7,788,560 - 7,802,821 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LYVE1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	48,937,419 - 48,954,196 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	48,937,357 - 48,954,206 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	52,284,695 - 52,301,543 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LYVE1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	54,252,203 - 54,268,873 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	54,253,495 - 54,269,598 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	151,906,808 - 151,923,634 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lyve1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624766	2,633,120 - 2,648,413 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624766	2,634,355 - 2,648,354 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in LYVE1
108 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003639783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038430509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038505802	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038569036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038633215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000012136 ⟹ ENSCAFP00000011250

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	21	33,716,581 - 33,727,297 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000078278 ⟹ ENSCAFP00000051729

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	21	33,716,581 - 33,727,209 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845026314 ⟹ ENSCAFP00845020747

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	21	34,593,119 - 34,611,630 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845026331 ⟹ ENSCAFP00845020758

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	21	34,593,119 - 34,604,188 (-)	Ensembl

RefSeq Acc Id:

XM_003639783 ⟹ XP_003639831

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	21	33,716,138 - 33,727,470 (-)	NCBI
Dog10K_Boxer_Tasha	21	33,281,339 - 33,292,627 (-)	NCBI

Sequence:

show sequence

CTGAGTCAGCATTAGCTAAATTTTCCAAAAAGCAATCCACAAAGTACAGCCGGGGCATTTAAGG
GACGTCACTCATTTCCCCCAGTGACCTTGACAAGTCAGAAGCTTGAAAGCAGGGAAATCCGGAT
GTCTCAGTTATGAACTGGAGCAGTGGGAATCCGATATATTTCCAGAAGTCTCCATCCAGTCTGG
TGATTGTCTGCCTCCATTACTACCAGTGACCATCCAGGGTGCTTCTCTAGTGCAGAAGGGGTTG
GCATAATGGCCAAATGCTTCAGCCTGGTGTTGCTTCTTGCCTCCATCTGGACCACAAGGCTCCT
GGTCCATGCAACTCTCCGTGTAGAAGAACTTTCCATCTCAGGGCCATGCAGAATCGTGGGGGTC
ACCCTTGTAAACAAAAAGACAATCCAGCAGCTGAATTTCACAGAAGCCCAGGAAGCCTGTAGGC
TGATGGGACTAACTTTGGCCAGCAAAGACCAGGTTGAAGCAGCACGGAGGTCTGGCTTTGAGAC
TTGCAGCTATGGATGGGTTGCAGATAAGCTCTTGGTCATCCCTCGGATTCTCCCAAACCCCAAG
TGTGGGAAGAATGGGATAGGTGTCCTGGTTTGGAGAAATTCACTCAGCAAAAAGTTCTTGGCCT
ACTGTTACAACTCATCTGATACTTGGATTAATTCATGCATTCCAGAAATTATCACCACCACAGA
TCCCATATTCAACATTCAAGAGACAATATACACAACAGAAATGATAGTCAGTGACAGTACCTAC
TCAGCTTCATCTACTGATGCACCTTACTCTGCTACACCTACTCTTGCTCCTACTTCTGCTCTGG
CTTCCACTTCTACTCGACGGAAAAGAAAATTGATTTGTGTAACAGAAGCCTTTGTGGAAACTAG
CACCGTATCTACAGAAACTGAGTCATATATTGAAAATAAAGCAGCATTCAAGAATGAGGTCGTT
GGGTTTGGAGGTGTCCCCACGGCTCTGCTAGTGCTTGCACTCCTCTTCTTTGCTGCCGCAGCTG
GTTTGGCGGTTTGCTACGTCAAAAGGTATGTGAAGACCTTTCCTTTTACAAACAAGAATCAGCA
GAAGGAAATGATTGAAACCAAAGTAGTAAAGGAAGAGAAAGCCGATGATAGCAACCCTAATGAA
GAATCAAAGAAAACTGATAAAAAGCCAGAAGAGCCCAAGAGTCCAACCAAAACCACAGTGCGAT
GCATGGAAGCTGAAGTTTAAAACAGAAAGAAATGGGAAGACACATCTGAGGCTGATTTCTTTCC
TGACACATATCCTGGCCCCAGATGGGGAAACTTAAAGGACAAGAACCAAACAAGAAAGTCCACC
CTTGGTTCTTAAATGGAATCAACTCAGGACTACCTTTGGACTATGGAGTTCACCAAATGGTGAA
CTTCTTCTGTAATTCTTTCTGGATCCTATCCTCCTACCTCCAAAGCTTCCCACAGCTTTCTAGC
CTGACTATGTCCTAATAATATCTCTGTGGGATAAAGGAGCTTCACAAAGCACAAGGACCTAAAA
CAACTAATCAGAACACATTTATAAAGAGGCTTCTCAGTTGGCTGAGCATAGCTGAGTTGAGAAC
CAAGAAACCACTGAGACTAAGGCTTTCTCTATTGATTCCACAGGCCAGATCCTTTCTTCATTCT
GAAAAGGTAACACACATCATCTGGCATGCCCTTCTGAGCCAGGCAAGAACAAAAGAAGGAAGGA
AAAGTTCAGCAACTGAAGGCCACAGAGATTCTCATGACTTGAGACCTGATCTCTTTGTAAAGGC
TAAGTAAGTAGAGAAAAAGAATGAGGCCAACGATGTTGCCAGCATATGGTCGTTGGTAACTATA
AATACAGATAGGGTCATAGTAGTCATCTCTGAATAATCTGAGTTGGAATCACTTTTTAGTGATT
TTTTTACTTTTGTAAGGAACAAAAAAAAAATCTCTTACAAATTTTTAGTTTTGGGATCCCTAGG
AGGCGCAGCGGTTTGGCGCCTGCCTTCGGCCTAAGGCGCGATCCTGGAGACCCGGGATCGAATC
CCACATCGGGCTCCCAGTGCATGGAGCCTGCTTCTCCCTCTGCCTGTGTCTCTGCCTCTCTCTC
TCTCTCTGTGACTATCATAAATAAATAAAAATTAAAAAATAAAAAAATAAAAAAATAAAAAAAC
AAATTTTTAGTTTTATCTGAGAAATTATTACTGAGGAAAACTACTGTGTTAAAAAGCAGTAAAA
TTTGGCAAACATTTATTGAATATGTTAGGTGCTGGGAAGGTATGACATTCTATAATTGAATGTT
ATTTATCAAAAACTTGCATAGAGTAAAATGTATGAAGCTAATTTTTTCAATTTTGATATCCCTA
GCTTATCTACTTGGAAAACTAATTTTTTACTAAGACTAGTCTATTCATTATTTTCTCTAACATG
CGGTCATTATAACCTTAATTTATTATTAACATACCTAAAAAGTATATTATTACCTCTATACACA
AAAGCACACTTTAAAAATGTCATTAATAAATGTATCGTCAGTTCTTTTTTCAGCAAGAAGAGCC
CAAGAGGTGTAGAGATTTGTGTTAAAAAAATAAAAGTATTTCGAAAATTT

hide sequence

RefSeq Acc Id:

XM_038430509 ⟹ XP_038286437

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	21	34,593,113 - 34,604,407 (-)	NCBI

RefSeq Acc Id:

XM_038505802 ⟹ XP_038361730

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	21	33,854,083 - 33,864,902 (-)	NCBI

RefSeq Acc Id:

XM_038569036 ⟹ XP_038424964

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	21	34,316,909 - 34,328,196 (-)	NCBI

RefSeq Acc Id:

XM_038633215 ⟹ XP_038489143

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	21	34,024,281 - 34,035,563 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003639831	(Get FASTA)	NCBI Sequence Viewer
	XP_038286437	(Get FASTA)	NCBI Sequence Viewer
	XP_038361730	(Get FASTA)	NCBI Sequence Viewer
	XP_038424964	(Get FASTA)	NCBI Sequence Viewer
	XP_038489143	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000011250.3
	ENSCAFP00000051729.1
	ENSCAFP00030007568.1
	ENSCAFP00030007591.1
	ENSCAFP00040020237.1
	ENSCAFP00040020265.1
	ENSCAFP00040020295.1
	ENSCAFP00845020747
	ENSCAFP00845020747.1
	ENSCAFP00845020758.1

RefSeq Acc Id:

XP_003639831 ⟸ XM_003639783

- UniProtKB:

A0A8C0M7M0 (UniProtKB/TrEMBL), A0A8I3NYL9 (UniProtKB/TrEMBL), A0A8P0NA08 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAKCFSLVLLLASIWTTRLLVHATLRVEELSISGPCRIVGVTLVNKKTIQQLNFTEAQEACRLM
GLTLASKDQVEAARRSGFETCSYGWVADKLLVIPRILPNPKCGKNGIGVLVWRNSLSKKFLAYC
YNSSDTWINSCIPEIITTTDPIFNIQETIYTTEMIVSDSTYSASSTDAPYSATPTLAPTSALAS
TSTRRKRKLICVTEAFVETSTVSTETESYIENKAAFKNEVVGFGGVPTALLVLALLFFAAAAGL
AVCYVKRYVKTFPFTNKNQQKEMIETKVVKEEKADDSNPNEESKKTDKKPEEPKSPTKTTVRCM
EAEV

hide sequence

Ensembl Acc Id:

ENSCAFP00000051729 ⟸ ENSCAFT00000078278

Ensembl Acc Id:

ENSCAFP00000011250 ⟸ ENSCAFT00000012136

RefSeq Acc Id:

XP_038361730 ⟸ XM_038505802

RefSeq Acc Id:

XP_038489143 ⟸ XM_038633215

RefSeq Acc Id:	XP_038286437 ⟸ XM_038430509
- UniProtKB:	A0A8C0M7M0 (UniProtKB/TrEMBL), A0A8I3NYL9 (UniProtKB/TrEMBL), A0A8P0NA08 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038424964 ⟸ XM_038569036
- UniProtKB:	A0A8C0M7M0 (UniProtKB/TrEMBL), A0A8I3NYL9 (UniProtKB/TrEMBL), A0A8P0NA08 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845020758 ⟸ ENSCAFT00845026331

Ensembl Acc Id:

ENSCAFP00845020747 ⟸ ENSCAFT00845026314

Protein Domains

Link

Promoters

RGD ID:

13687250

Promoter ID:

EPDNEW_C5316

Type:

initiation region

Name:

LYVE1_1

Description:

lymphatic vessel endothelial hyaluronan receptor 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	21	33,727,337 - 33,727,397	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000007580	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030004683	UniProtKB/TrEMBL
	ENSCAFG00040012658	UniProtKB/TrEMBL
	ENSCAFG00845014712	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000012136.4	UniProtKB/TrEMBL
	ENSCAFT00000078278.2	UniProtKB/TrEMBL
	ENSCAFT00030008612.1	UniProtKB/TrEMBL
	ENSCAFT00030008636.1	UniProtKB/TrEMBL
	ENSCAFT00040023329.1	UniProtKB/TrEMBL
	ENSCAFT00040023357.1	UniProtKB/TrEMBL
	ENSCAFT00040023389.1	UniProtKB/TrEMBL
	ENSCAFT00845026314	ENTREZGENE
	ENSCAFT00845026314.1	UniProtKB/TrEMBL
	ENSCAFT00845026331.1	UniProtKB/TrEMBL
Gene3D-CATH	3.10.100.10	UniProtKB/TrEMBL
InterPro	C-type_lectin-like/link_sf	UniProtKB/TrEMBL
	CD44_antigen-like	UniProtKB/TrEMBL
	CTDL_fold	UniProtKB/TrEMBL
	Link_dom	UniProtKB/TrEMBL
KEGG Report	cfa:100855439	UniProtKB/TrEMBL
NCBI Gene	LYVE1	ENTREZGENE
PANTHER	LYMPHATIC VESSEL ENDOTHELIAL HYALURONIC ACID RECEPTOR 1	UniProtKB/TrEMBL
	PTHR10225	UniProtKB/TrEMBL
Pfam	Xlink	UniProtKB/TrEMBL
PRINTS	LINKMODULE	UniProtKB/TrEMBL
PROSITE	LINK_1	UniProtKB/TrEMBL
	LINK_2	UniProtKB/TrEMBL
SMART	LINK	UniProtKB/TrEMBL
Superfamily-SCOP	SSF56436	UniProtKB/TrEMBL
UniProt	A0A8C0M7M0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0RCQ5_CANLF	UniProtKB/TrEMBL
	A0A8C0SEH8_CANLF	UniProtKB/TrEMBL
	A0A8I3NYL9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RYB7_CANLF	UniProtKB/TrEMBL
	A0A8P0NA08	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:42900	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD