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ONTOLOGY REPORT - ANNOTATIONS

Term:glycosaminoglycan catabolic process
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Accession:GO:0006027 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars.
Synonyms:exact_synonym: glycosaminoglycan breakdown;   glycosaminoglycan catabolism;   glycosaminoglycan degradation


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glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HYAL2 hyaluronidase 2 involved_in ISO (PMID:9712871) UniProt PMID:9712871 NCBI chr20:39,029,426...39,034,451
Ensembl chr20:39,031,735...39,034,130 		JBrowse link
G IDS iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:117,490,749...117,515,566
Ensembl chr  X:117,491,548...117,515,496 		JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:16979922), (PMID:22580166)
(PMID:19751987)
(PMID:19834056)
(PMID:21873421)		 RGD
MGI		 PMID:6138357 PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 More... RGD:1599427 NCBI chr 3:91,517,225...91,534,593
Ensembl chr 3:91,522,035...91,534,593 		JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11278811) Ensembl
MGI		 PMID:11278811 GO_REF:0000107 NCBI chr21:33,716,138...33,727,470
Ensembl chr21:33,716,581...33,727,297 		JBrowse link
G SGSH N-sulfoglucosamine sulfohydrolase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:1,540,933...1,547,029
Ensembl chr 9:1,540,932...1,547,029 		JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUSB glucuronidase beta involved_in ISO (PMID:23897660) MGI PMID:23897660 NCBI chr 6:730,345...743,916
Ensembl chr 6:730,358...779,424 		JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,221,809...57,248,432
Ensembl chr 2:57,222,186...57,248,417 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in ISO (PMID:22451654) MGI PMID:22451654 NCBI chr20:39,035,924...39,040,443
Ensembl chr20:39,038,514...39,040,368 		JBrowse link
G HYAL4 hyaluronidase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23086929) Ensembl
MGI		 PMID:23086929 GO_REF:0000107 NCBI chr14:11,736,208...11,743,848 JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARSB arylsulfatase B involved_in ISO (PMID:24240681) MGI PMID:24240681 NCBI chr 3:27,870,111...28,034,906
Ensembl chr 3:27,870,151...28,034,906 		JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:35,836,788...35,862,525 JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,221,809...57,248,432
Ensembl chr 2:57,222,186...57,248,417 		JBrowse link
G IDS iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:117,490,749...117,515,566
Ensembl chr  X:117,491,548...117,515,496 		JBrowse link
G IDUA alpha-L-iduronidase involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:19834056)
(PMID:19751987)		 UniProt
MGI
Ensembl		 PMID:19751987 PMID:19834056 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:91,517,225...91,534,593
Ensembl chr 3:91,522,035...91,534,593 		JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDUA alpha-L-iduronidase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21873421)
(PMID:19834056)
(PMID:19751987)		 MGI
Ensembl		 PMID:19751987 PMID:19834056 PMID:21873421 GO_REF:0000107 NCBI chr 3:91,517,225...91,534,593
Ensembl chr 3:91,522,035...91,534,593 		JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 involved_in ISO (PMID:17324121) UniProt PMID:17324121 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G CD44 CD44 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:32,735,493...32,826,483
Ensembl chr18:32,737,907...32,827,107 		JBrowse link
G CEMIP cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,726,605...56,786,176
Ensembl chr 3:56,726,493...56,876,026 		JBrowse link
G CEMIP2 cell migration inducing hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:85,944,255...86,020,955
Ensembl chr 1:85,945,557...86,019,195 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) UniProt PMID:19577615 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G GUSB glucuronidase beta involved_in ISO (PMID:20385825) MGI PMID:20385825 NCBI chr 6:730,345...743,916
Ensembl chr 6:730,358...779,424 		JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:35,836,788...35,862,525 JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,221,809...57,248,432
Ensembl chr 2:57,222,186...57,248,417 		JBrowse link
G HMMR hyaluronan mediated motility receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:47,743,576...47,786,982
Ensembl chr 4:47,744,433...47,786,987 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:39,035,924...39,040,443
Ensembl chr20:39,038,514...39,040,368 		JBrowse link
G HYAL2 hyaluronidase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:39,029,426...39,034,451
Ensembl chr20:39,031,735...39,034,130 		JBrowse link
G HYAL3 hyaluronidase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:39,041,940...39,047,388
Ensembl chr20:39,042,070...39,047,365 		JBrowse link
G HYAL4 hyaluronidase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:11,736,208...11,743,848 JBrowse link
G IFRD2 interferon related developmental regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:39,047,573...39,053,528
Ensembl chr20:39,048,259...39,053,341 		JBrowse link
G LOC609321 hyaluronidase-1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:11,760,666...11,770,147 JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:33,716,138...33,727,470
Ensembl chr21:33,716,581...33,727,297 		JBrowse link
G SPAM1 sperm adhesion molecule 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:11,704,766...11,723,187
Ensembl chr14:11,704,757...11,712,570 		JBrowse link
G STAB2 stabilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:42,187,074...42,328,874
Ensembl chr15:42,187,790...42,328,883 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA		 AgBase
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNS glucosamine (N-acetyl)-6-sulfatase ISO RGD PMID:3161730 RGD:1600571 NCBI chr10:7,363,628...7,415,618
Ensembl chr10:7,366,247...7,507,270 		JBrowse link
peptidoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LYG1 lysozyme g1 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:43,407,780...43,419,610
Ensembl chr10:43,408,598...43,419,765 		JBrowse link
G LYG2 lysozyme g2 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:43,458,359...43,470,792
Ensembl chr10:43,458,176...43,468,290 		JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:109,614,404...109,618,242
Ensembl chr 1:109,614,437...109,618,242 		JBrowse link
G PGLYRP2 peptidoglycan recognition protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:46,724,906...46,730,227
Ensembl chr20:46,726,224...46,730,321 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    metabolic process 10933
      organic substance metabolic process 10478
        macromolecule metabolic process 8843
          aminoglycan metabolic process 117
            aminoglycan catabolic process 33
              glycosaminoglycan catabolic process 28
                chondroitin sulfate catabolic process 4
                dermatan sulfate catabolic process 5
                galactosaminoglycan catabolic process 0
                heparin catabolic process 1
                hyaluronan catabolic process 19
                keratan sulfate catabolic process 1
                peptidoglycan catabolic process 4
paths to the root