Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:dermatan sulfate metabolic process
go back to main search page
Accession:GO:0030205 term browser browse the term
Definition:The chemical reactions and pathways involving dermatan sulfate, any of a group of glycosaminoglycans with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units. They are important components of ground substance or intercellular cement of skin and some connective tissues.
Synonyms:exact_synonym: chondroitin sulfate B metabolic process;   chondroitin sulfate B metabolism;   dermatan sulfate metabolism;   dermatan sulphate metabolic process;   dermatan sulphate metabolism


show annotations for term's descendants           Sort by:
 
dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSE dermatan sulfate epimerase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:56,787,809...56,868,037
Ensembl chr 1:56,787,256...56,867,716
JBrowse link
G DSEL dermatan sulfate epimerase like acts_upstream_of_or_within ISO (MGI:5583874|PMID:22496542) MGI PMID:22496542 MGI:5583874 NCBI chr 1:10,344,468...10,366,936 JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:14,702,493...14,713,440
Ensembl chr 6:14,705,427...14,706,686
JBrowse link
G CHST14 carbohydrate sulfotransferase 14 involved_in ISO (PMID:11470797) MGI PMID:11470797 NCBI chr30:7,640,988...7,643,576
Ensembl chr30:7,640,637...7,642,778
JBrowse link
G DSE dermatan sulfate epimerase involved_in ISO (PMID:16505484) UniProt PMID:16505484 NCBI chr 1:56,787,809...56,868,037
Ensembl chr 1:56,787,256...56,867,716
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDUA alpha-L-iduronidase involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:4414887|PMID:19751987)
(MGI:4397742|PMID:19834056)
UniProt
Ensembl
MGI
PMID:19751987 PMID:19834056 GO_REF:0000024 GO_REF:0000107 MGI:4397742 MGI:4414887 NCBI chr 3:91,517,225...91,534,593
Ensembl chr 3:91,522,035...91,534,593
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16153
    cellular process 15480
      cellular metabolic process 9584
        sulfur compound metabolic process 294
          dermatan sulfate metabolic process 5
            dermatan sulfate biosynthetic process 3
            dermatan sulfate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 16153
    metabolic process 10510
      organic substance metabolic process 10079
        macromolecule metabolic process 8734
          cellular macromolecule metabolic process 7382
            glycoprotein metabolic process 366
              proteoglycan metabolic process 76
                dermatan sulfate proteoglycan metabolic process 7
                  dermatan sulfate metabolic process 5
                    dermatan sulfate biosynthetic process 3
                    dermatan sulfate catabolic process 1
paths to the root