CHPF (chondroitin polymerizing factor)

Gene: CHPF (chondroitin polymerizing factor) Canis lupus familiaris

Analyze

Symbol:

CHPF

Name:

chondroitin polymerizing factor

RGD ID:

12158485

Description:

ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (inferred); glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (inferred); glycosyltransferase activity (inferred); INVOLVED IN chondroitin sulfate biosynthetic process (ortholog); ASSOCIATED WITH alacrima, achalasia, and impaired intellectual development syndrome (ortholog); cerebrotendinous xanthomatosis (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

chondroitin sulfate synthase 2; obscurin-like protein 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	26,048,236 - 26,052,871 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	26,025,993 - 26,052,806 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	26,873,699 - 26,878,283 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	26,063,334 - 26,067,916 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	26,063,323 - 26,067,901 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	25,967,198 - 25,971,779 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	25,903,317 - 25,907,899 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	25,923,906 - 25,928,488 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

alacrima, achalasia, and impaired intellectual development syndrome (ISO)

cerebrotendinous xanthomatosis (ISO)

genetic disease (ISO)

Neurodevelopmental Disorders (ISO)

paroxysmal nonkinesigenic dyskinesia 1 (ISO)

polydactyly (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chondroitin sulfate biosynthetic process (IEA,ISO)

Cellular Component

Golgi apparatus (IEA,ISO)

Golgi cisterna membrane (IEA)

membrane (IEA)

Molecular Function

acetylgalactosaminyltransferase activity (IEA)

glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (IEA)

glycosyltransferase activity (IEA)

hexosyltransferase activity (IEA)

N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (IEA)

protein binding (ISO)

transferase activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CHPF
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	26,048,236 - 26,052,871 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	26,025,993 - 26,052,806 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	26,873,699 - 26,878,283 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	26,063,334 - 26,067,916 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	26,063,323 - 26,067,901 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	25,967,198 - 25,971,779 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	25,903,317 - 25,907,899 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	25,923,906 - 25,928,488 (-)	NCBI		UU_Cfam_GSD_1.0

CHPF
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	219,538,954 - 219,543,809 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	219,538,954 - 219,543,809 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	220,403,676 - 220,408,531 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	220,111,922 - 220,116,682 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	214,173,632 - 214,178,450 (-)	NCBI		Celera
Cytogenetic Map	2	q35	NCBI
HuRef	2	212,256,698 - 212,261,516 (-)	NCBI		HuRef
CHM1_1	2	220,409,491 - 220,414,309 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	220,023,653 - 220,028,508 (-)	NCBI		T2T-CHM13v2.0

Chpf
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	75,451,213 - 75,456,115 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	75,451,213 - 75,455,951 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	75,474,569 - 75,479,471 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	75,474,569 - 75,479,307 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	75,471,144 - 75,476,046 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	75,357,717 - 75,362,549 (-)	NCBI		MGSCv36	mm8
Celera	1	75,963,982 - 75,968,882 (-)	NCBI		Celera
Cytogenetic Map	1	C4	NCBI
cM Map	1	39.14	NCBI

Chpf
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	84,411,824 - 84,416,523 (-)	NCBI		GRCr8
mRatBN7.2	9	76,963,178 - 76,967,878 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	76,963,184 - 76,967,878 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	85,407,420 - 85,412,114 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	90,536,299 - 90,540,993 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	88,922,478 - 88,927,172 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	82,669,199 - 82,673,898 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	82,669,204 - 82,673,898 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	82,438,460 - 82,443,159 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	74,749,945 - 74,754,639 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	74,897,012 - 74,901,707 (-)	NCBI
Celera	9	74,533,082 - 74,537,776 (-)	NCBI		Celera
Cytogenetic Map	9	q33	NCBI

Chpf
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955453	13,932,822 - 13,939,350 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955453	13,932,822 - 13,937,587 (+)	NCBI	ChiLan1.0	ChiLan1.0

CHPF
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	122,169,117 - 122,173,984 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	122,184,090 - 122,188,954 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	106,796,215 - 106,801,081 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	225,386,262 - 225,391,239 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	225,386,262 - 225,390,886 (-)	Ensembl	panpan1.1		panPan2

Chpf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	175,576,218 - 175,580,939 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936569	1,918,961 - 1,923,724 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936569	1,918,999 - 1,923,735 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CHPF
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	121,544,230 - 121,553,288 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	121,547,666 - 121,553,590 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	134,588,262 - 134,594,031 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CHPF
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	105,433,966 - 105,438,861 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	105,432,912 - 105,438,896 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	93,962,344 - 93,967,276 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Chpf
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624823	5,518,410 - 5,525,312 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624823	5,518,382 - 5,522,997 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CHPF
56 total Variants

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003640195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038585857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000024741 ⟹ ENSCAFP00000022951

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	37	26,025,993 - 26,052,806 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000066582 ⟹ ENSCAFP00000063255

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	37	26,048,226 - 26,052,806 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845054017 ⟹ ENSCAFP00845042433

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	37	26,063,323 - 26,067,901 (-)	Ensembl

RefSeq Acc Id:

XM_003640195 ⟹ XP_003640243

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	37	26,048,236 - 26,052,871 (-)	NCBI
Dog10K_Boxer_Tasha	37	26,873,699 - 26,878,283 (-)	NCBI

Sequence:

show sequence

CCGCCCCCTCCCCGGGCCGGGCCCGCCCCCTCCGAGCCTCCCGCGGCCGCCGCGGTCCCGGCGC
CATGCGGGCGTCGCTGCTGCTGTCGGTGCTGCGGCCCGCGGGGCCCGTGGCCGTGGGCATCTCC
CTGGGCTTCACGCTGAGCCTGCTCAGCGTCACCTGGGTGGAGGAGCCGTGCGGCCCCGGCCCGC
CGCAGCCCGGCGACCCTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTC
GGTGCAGCCCGGGGCGGAGCGCGACCGGCCGGCGGCGGGCGCGGCGGAGAGCTGGGAGCCGCGC
GTCCTGCCCTACCACCCCGCGCAGCCCGGCCAGGCCGCCAAGAAGGCCGTCAGGACCCGCTACA
TCAGCACGGAGCTGGGCATCCGGCAGAGGCTGCTTGTGGCCGTGCTGACCTCCCAAGCCACGCT
GCCCACGCTGGGAGTGGCCGTGAACCGCACGCTGGGCCACCGGCTGGAGCGCGTGGTCTTCCTG
ACAGGCTCTCGCGGCCGCCGGGCCCCGCCGGGCATGGCCGTGGTGACCCTGGGCGAGGAGCGGC
CCATCGGGCGCCTGCACCTGGCGCTGCGCCACCTCCTGGAGCAGCACGGCGACGACTTTGACTG
GTTCTTCATCGTGCCCGATGCCACCTACACCGAGGCCCACGGACTGGCTCGCCTGGCCGGCCGT
CTCAGCCTGGCGGCCGCCGCGCACCTCTACCTGGGCCGGCCGCAGGACTTCATCGGGGGAGAGC
CCGCCCCAGGCCGCTACTGCCACGGAGGCTTTGGGGTGCTGCTGTCCCGCACACTGCTGCAGCA
GCTGCGCCCCCACCTGGAAGGCTGCCGCAACGACATCGTCAGTGCGCGCCCCGATGAGTGGCTG
GGCCGCTGCATCCTGGATGCCACGGGGGTGGGCTGCACCGGCGACCACGAGGGAGTACACTATA
GCTACCTGGAGCTGAGCCCTGGGGAGCATGTGCAGGAGGGAGACCCCCGTTTCCGCAGTGCCCT
GACCGCCCACCCTGTGCATGACCCCGTGCACATGTACCAGCTGCACAAAGCTTTTGCCCGAGCT
GAGCTGGAACGCACATACCAAGAGATCCAGGAGTTGCAGTGGGAGATCCAGAACACCAGCCACC
TGGCAGCTGACGGCGAGCGGGCGGCCGCCTGGCCCGTGGGCATTCCCGCACCATCCCGCCCGGC
CTCTCGCTTCGAGGTGCTGCGCTGGGACTATTTCACAGAGCAGCACGCCTTCTCCTGCGCCGAC
GGCTCGCCCCGCTGCCCGCTGCGAGGGGCCGACCGGGCCGACGTGGCCGACGTGCTGGGTGCCG
CCCTGGAAGAGCTCAACCGCCGCTACCACCCGGCCCTGCGGCTCGAGAAGCAGCAGCTGGTCAA
CGGCTACCGGCGCTTCGATCCTGCCCGCGGCATGGAGTACACGCTGGACCTGCAGCTGGAGGTG
CTGACCCCGCAGGGCGGCCGCCGGCCCCTCACCCGCCGGGTGCAGCTGCTGCGGCCCCTGAGCC
GCGTGGAGATCCTGCCTGTGCCCTACGTCACCGAGGCGTCGCGTCTCACCGTGTTGCTGCCTCT
GGCTGCGGCCGAGCGGGACCTGGCCCCTGGCTTCCTGGAGGCCTTCGCCACCGCGGCGCTGGAG
CCGGGTGACGCGGCTGCAGCCCTGACCCTGCTGCTCCTGTACGAGCCACGACAGGCCCAGCGGG
CGGCCCACGCAGATGTCTTTGCGCCTGTCAAGGCCCACGTGGCGGAACTCGAGCGGCGTTTCCC
GGGTGCCCGGGTGCCCTGGCTCAGCGTGCAGACAGCTGCACCCTCGCCGCTGCGCCTCATGGAC
CTGCTCTCCAAGAAGCACCCGCTGGACACGCTGTTCCTGCTGGCCGGGCCCGACACGGTGCTCA
CGCCCGACTTCCTGAACCGCTGCCGCATGCACGCCATCTCTGGCTGGCAGGCCTTCTTCCCCAT
GCACTTCCAGGCCTTCCACCCGGCCGTGGCGCCCCCCCAGGGCCCCGGGCCCCCGGAGCTGGGC
CGAGACACGGGCCGCTTCGACCGCCAGGCGGCCAGCGAGGCCTGCTTCTACAACTCCGACTACG
TGGCAGCCCGCGGACGGCTGGCAGCGGCCTCGGAGCAGGAAGAGGAGCTGCTGGAGAGCACGGA
CGTGTACGAGCTGTTCCTGCGCTTCTCGGGCCTACACGTGCTGCGCGCCGTGGAACCAGCGCTG
CTGCAGCGCTACCGGGCGCAGGCGTGCAGCGCGCGGCTCAGCGAGGACCTGTACCACCGCTGCC
GCCAGAGCGAGCTGGAGGGCCTGGGCTCCCGCACCCAGCTGGCCATGCTGCTCTTTGAGCAGGA
GCAGGGCAACAGCACCTGAGCCCGCCCTGCGCCCCGGAACCCCGGCACGGCGGCACCCCCTCCT
CCCCAACGATCCGCAGCCCCCTGCCAGCCTCGCCGGACAGGGCTGGCCGTGGCCTTGGATCCCA
GGGCAGCCCGCGGGCCCCACTCTCTAGCTGTGTGGGTCCTCGGGCTCAGGACAGGCCCCCCGGG
GGAGGTACCTTCGGAGCCACCCCTCCCCACCCCCAACCTGGTCTCCCTGTCTCCCACCCTTGAC
GCTGCTGATTCAGGCTGTGGCCCCTTGAGTATTTATGCAGTGCAGTCTGCCTGACGCCAGCCCC
ATCTCCTAGGACCTCCTGGGAGTGGGCTGTAGATGAGTGGTTGGGGACGAGGGGAGCCGAGAGA
GGAAGGTGGGGTATCTCCCAGCTTCTCCCTTCTGGACCTGGATGAAGGTCCCTGCCTTTAATAA
ACTGGTTGAGTGTGGACTAAT

hide sequence

RefSeq Acc Id:

XM_038448064 ⟹ XP_038303992

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	37	26,063,334 - 26,067,916 (-)	NCBI

RefSeq Acc Id:

XM_038522055 ⟹ XP_038377983

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	37	25,967,198 - 25,971,779 (-)	NCBI

RefSeq Acc Id:

XM_038585857 ⟹ XP_038441785

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	37	25,923,906 - 25,928,488 (-)	NCBI

RefSeq Acc Id:

XM_038650233 ⟹ XP_038506161

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	37	25,903,317 - 25,907,899 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003640243	(Get FASTA)	NCBI Sequence Viewer
	XP_038303992	(Get FASTA)	NCBI Sequence Viewer
	XP_038377983	(Get FASTA)	NCBI Sequence Viewer
	XP_038441785	(Get FASTA)	NCBI Sequence Viewer
	XP_038506161	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000063255.2
	ENSCAFP00030020823.1
	ENSCAFP00040015237.1
	ENSCAFP00040015252.1
	ENSCAFP00845042433
	ENSCAFP00845042433.1

RefSeq Acc Id:

XP_003640243 ⟸ XM_003640195

- UniProtKB:

A0A8C0RJ12 (UniProtKB/TrEMBL), A0A8P0PC27 (UniProtKB/TrEMBL), A0A8C0S392 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDPELPPRGNTNAARRPNS
VQPGAERDRPAAGAAESWEPRVLPYHPAQPGQAAKKAVRTRYISTELGIRQRLLVAVLTSQATL
PTLGVAVNRTLGHRLERVVFLTGSRGRRAPPGMAVVTLGEERPIGRLHLALRHLLEQHGDDFDW
FFIVPDATYTEAHGLARLAGRLSLAAAAHLYLGRPQDFIGGEPAPGRYCHGGFGVLLSRTLLQQ
LRPHLEGCRNDIVSARPDEWLGRCILDATGVGCTGDHEGVHYSYLELSPGEHVQEGDPRFRSAL
TAHPVHDPVHMYQLHKAFARAELERTYQEIQELQWEIQNTSHLAADGERAAAWPVGIPAPSRPA
SRFEVLRWDYFTEQHAFSCADGSPRCPLRGADRADVADVLGAALEELNRRYHPALRLEKQQLVN
GYRRFDPARGMEYTLDLQLEVLTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPL
AAAERDLAPGFLEAFATAALEPGDAAAALTLLLLYEPRQAQRAAHADVFAPVKAHVAELERRFP
GARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPM
HFQAFHPAVAPPQGPGPPELGRDTGRFDRQAASEACFYNSDYVAARGRLAAASEQEEELLESTD
VYELFLRFSGLHVLRAVEPALLQRYRAQACSARLSEDLYHRCRQSELEGLGSRTQLAMLLFEQE
QGNST

hide sequence

RefSeq Acc Id:

ENSCAFP00000022951 ⟸ ENSCAFT00000024741

RefSeq Acc Id:

ENSCAFP00000063255 ⟸ ENSCAFT00000066582

RefSeq Acc Id:

XP_038377983 ⟸ XM_038522055

RefSeq Acc Id:

XP_038506161 ⟸ XM_038650233

RefSeq Acc Id:	XP_038303992 ⟸ XM_038448064
- UniProtKB:	A0A8C0LN70 (UniProtKB/TrEMBL), A0A8I3Q6I3 (UniProtKB/TrEMBL), A0A8C0S392 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038441785 ⟸ XM_038585857
- UniProtKB:	A0A8C0S392 (UniProtKB/TrEMBL), A0A8C0S3G2 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845042433 ⟸ ENSCAFT00845054017

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000045731	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030012899	UniProtKB/TrEMBL
	ENSCAFG00040009464	UniProtKB/TrEMBL
	ENSCAFG00845030445	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000066582.2	UniProtKB/TrEMBL
	ENSCAFT00030023893.1	UniProtKB/TrEMBL
	ENSCAFT00040017565.1	UniProtKB/TrEMBL
	ENSCAFT00040017582.1	UniProtKB/TrEMBL
	ENSCAFT00845054017	ENTREZGENE
	ENSCAFT00845054017.1	UniProtKB/TrEMBL
Gene3D-CATH	3.90.550.50	UniProtKB/TrEMBL
InterPro	Chond_GalNAc	UniProtKB/TrEMBL
KEGG Report	cfa:488539	UniProtKB/TrEMBL
NCBI Gene	CHPF	ENTREZGENE
PANTHER	CHONDROITIN SULFATE SYNTHASE 2	UniProtKB/TrEMBL
	CHONDROITIN SYNTHASE	UniProtKB/TrEMBL
Pfam	CHGN	UniProtKB/TrEMBL
UniProt	A0A8C0LN70	ENTREZGENE
	A0A8C0RJ12	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0S392	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0S3G2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3Q6I3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0PC27	ENTREZGENE
UniProt Secondary	A0A8P0PC27	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar