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ONTOLOGY REPORT - ANNOTATIONS

Term:retinoid metabolic process
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Accession:GO:0001523 term browser browse the term
Definition:The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
Synonyms:exact_synonym: retinoid metabolism


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retinoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:21,282,526...21,299,387
Ensembl chr32:21,282,890...21,299,328 		JBrowse link
G ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide acts_upstream_of_or_within ISO (PMID:12027900) MGI PMID:12027900 NCBI chr32:21,249,459...21,261,130
Ensembl chr32:21,249,739...21,265,048 		JBrowse link
G AKR1B1 aldo-keto reductase family 1 member B involved_in ISO (PMID:12732097) UniProt PMID:12732097 NCBI chr14:2,991,888...3,006,941
Ensembl chr14:2,991,888...3,006,940 		JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 involved_in ISO PMID:7832787 UniProt PMID:7832787 RGD:11558002 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789 		JBrowse link
G BCO1 beta-carotene oxygenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:70,598,743...70,637,273
Ensembl chr 5:70,599,284...70,637,017 		JBrowse link
G CLPS colipase involved_in ISO (PMID:11751900) MGI PMID:11751900 NCBI chr12:4,911,551...4,913,620
Ensembl chr12:4,911,549...4,914,427 		JBrowse link
G CPNE6 copine 6 involved_in ISO (PMID:12604222) UniProt PMID:12604222 NCBI chr 8:4,046,532...4,058,498
Ensembl chr 8:4,046,544...4,084,744 		JBrowse link
G CYP2J2 cytochrome P450 family 2 subfamily J member 2 ISO RGD PMID:9606960 RGD:1625388 NCBI chr 5:49,942,241...49,986,603
Ensembl chr 5:49,942,193...49,984,617 		JBrowse link
G DGAT1 diacylglycerol O-acyltransferase 1 involved_in ISO (PMID:18348983) MGI PMID:18348983 NCBI chr13:37,745,395...37,761,337
Ensembl chr13:37,741,706...37,756,916 		JBrowse link
G DHRS3 dehydrogenase/reductase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24005908) Ensembl
MGI		 PMID:24005908 GO_REF:0000107 NCBI chr 2:83,826,361...83,865,412
Ensembl chr 2:83,826,374...83,865,426 		JBrowse link
G LDLR low density lipoprotein receptor involved_in ISO (PMID:8798405) MGI PMID:8798405 NCBI chr20:50,115,175...50,152,443
Ensembl chr20:50,048,736...50,152,355 		JBrowse link
G LIPA lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:27354281) MGI PMID:27354281 NCBI chr26:38,892,771...38,918,441
Ensembl chr26:38,893,337...38,918,436 		JBrowse link
G LOC100856533 alcohol dehydrogenase E chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:21,422,428...21,437,058 JBrowse link
G LPL lipoprotein lipase involved_in ISO (PMID:25589507) MGI PMID:25589507 NCBI chr25:37,078,306...37,102,729
Ensembl chr25:37,079,756...37,102,700 		JBrowse link
G LRAT lecithin retinol acyltransferase involved_in ISO (PMID:10487743)
(PMID:16115871)		 MGI PMID:10487743 PMID:16115871 NCBI chr15:52,399,773...52,409,590
Ensembl chr15:52,399,544...52,406,176 		JBrowse link
G PNLIP pancreatic lipase involved_in ISO (PMID:10769148) MGI PMID:10769148 NCBI chr28:27,139,028...27,156,457
Ensembl chr28:27,139,230...27,212,178 		JBrowse link
G PNPLA2 patatin like phospholipase domain containing 2 involved_in ISO (PMID:25732851) MGI PMID:25732851 NCBI chr18:45,182,569...45,187,937
Ensembl chr18:45,182,566...45,187,268 		JBrowse link
G RARRES2 retinoic acid receptor responder 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,671,345...14,675,000
Ensembl chr16:14,671,130...14,674,926 		JBrowse link
G RBP1 retinol binding protein 1 involved_in ISO (PMID:10487743) MGI PMID:10487743 NCBI chr23:35,677,844...35,698,194
Ensembl chr23:35,679,176...35,698,363 		JBrowse link
G RBP2 retinol binding protein 2 involved_in ISO (PMID:12138113)
(PMID:35552670)		 MGI PMID:12138113 PMID:35552670 NCBI chr23:35,619,215...35,642,249
Ensembl chr23:35,619,221...35,642,213 		JBrowse link
G RBP4 retinol binding protein 4 involved_in ISO (PMID:25732851) MGI PMID:25732851 NCBI chr28:7,822,936...7,830,735
Ensembl chr28:7,822,944...7,830,750 		JBrowse link
G RDH11 retinol dehydrogenase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:41,651,970...41,669,661
Ensembl chr 8:41,614,921...41,669,576 		JBrowse link
G RDH5 retinol dehydrogenase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:120,386...125,195
Ensembl chr10:120,057...125,197 		JBrowse link
G RETSAT retinol saturase involved_in ISO (PMID:15358783) MGI PMID:15358783 NCBI chr17:39,668,185...39,682,166
Ensembl chr17:39,668,256...39,680,560 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in ISS
IDA
IEA		 (PMID:16150724) UniProt
Ensembl		 PMID:16150724 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:76,887,399...76,911,133
Ensembl chr 6:76,887,399...76,911,131 		JBrowse link
G TTR transthyretin involved_in ISO (PMID:11036082) MGI PMID:11036082 NCBI chr 7:57,940,354...57,947,084
Ensembl chr 7:57,914,381...57,947,058 		JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:11876656) MGI PMID:11876656 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11876656) Ensembl
MGI		 PMID:11876656 GO_REF:0000107 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G ALDH8A1 aldehyde dehydrogenase 8 family member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11876656) Ensembl
MGI		 PMID:11876656 GO_REF:0000107 NCBI chr 1:27,672,422...27,695,029
Ensembl chr 1:27,673,024...27,694,868 		JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr30:37,793,277...37,799,535
Ensembl chr30:37,793,508...37,796,866 		JBrowse link
G DHRS9 dehydrogenase/reductase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:13,859,935...13,881,432
Ensembl chr36:13,866,959...13,880,179 		JBrowse link
9-cis-retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:17167544 RGD:2306320 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789 		JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1C3 aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) involved_in ISO (PMID:21851338) UniProt PMID:21851338 NCBI chr 2:30,661,333...30,691,283
Ensembl chr 2:30,674,558...30,690,043 		JBrowse link
G PRMT3 protein arginine methyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:42,406,327...42,530,157
Ensembl chr21:42,406,314...42,528,116 		JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RDH10 retinol dehydrogenase 10 ISO RGD PMID:21138835 RGD:6771354 NCBI chr29:21,886,014...21,912,451
Ensembl chr29:21,885,012...21,911,303 		JBrowse link
G RDH16 retinol dehydrogenase 16 ISO RGD PMID:21138835 RGD:6771354 NCBI chr10:1,124,322...1,134,138
Ensembl chr10:1,124,320...1,130,453 		JBrowse link
regulation of vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DGAT1 diacylglycerol O-acyltransferase 1 ISO RGD PMID:18000880 RGD:10400849 NCBI chr13:37,745,395...37,761,337
Ensembl chr13:37,741,706...37,756,916 		JBrowse link
G ISX intestine specific homeobox acts_upstream_of_or_within ISO (PMID:18093975) MGI PMID:18093975 NCBI chr10:28,993,515...29,011,736
Ensembl chr10:28,993,795...29,011,640 		JBrowse link
retinal metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:55,058,361...55,186,255
Ensembl chr 6:55,058,361...55,186,253 		JBrowse link
G AKR1C3 aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) involved_in ISO (PMID:21851338) UniProt PMID:21851338 NCBI chr 2:30,661,333...30,691,283
Ensembl chr 2:30,674,558...30,690,043 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12610736) Ensembl
MGI		 PMID:12610736 GO_REF:0000107 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:40,130,904...40,168,686
Ensembl chr 3:40,132,726...40,168,664 		JBrowse link
G ALDH8A1 aldehyde dehydrogenase 8 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,672,422...27,695,029
Ensembl chr 1:27,673,024...27,694,868 		JBrowse link
G BCO1 beta-carotene oxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25701869) Ensembl
MGI		 PMID:25701869 GO_REF:0000107 NCBI chr 5:70,598,743...70,637,273
Ensembl chr 5:70,599,284...70,637,017 		JBrowse link
G BCO2 beta-carotene oxygenase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25701869) Ensembl
MGI		 PMID:25701869 GO_REF:0000107 NCBI chr 5:20,914,658...20,969,847
Ensembl chr 5:20,915,647...20,964,177 		JBrowse link
G CPNE6 copine 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12680773) Ensembl
MGI		 PMID:12680773 GO_REF:0000107 NCBI chr 8:4,046,532...4,058,498
Ensembl chr 8:4,046,544...4,084,744 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,273,281...30,278,554
Ensembl chr17:30,272,749...30,278,554 		JBrowse link
G CYP27C1 cytochrome P450 family 27 subfamily C member 1 involved_in ISO (PMID:27059013) UniProt PMID:27059013 NCBI chr19:23,374,295...23,400,054 JBrowse link
G PTS 6-pyruvoyltetrahydropterin synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:20,883,128...20,912,318
Ensembl chr 5:20,896,236...20,912,297 		JBrowse link
G RBP4 retinol binding protein 4 acts_upstream_of_or_within ISO (PMID:11562477) MGI PMID:11562477 NCBI chr28:7,822,936...7,830,735
Ensembl chr28:7,822,944...7,830,750 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:21,886,014...21,912,451
Ensembl chr29:21,885,012...21,911,303 		JBrowse link
G RDH11 retinol dehydrogenase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12807874) MGI
Ensembl		 PMID:12807874 GO_REF:0000107 NCBI chr 8:41,651,970...41,669,661
Ensembl chr 8:41,614,921...41,669,576 		JBrowse link
G RDH13 retinol dehydrogenase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,539,363...102,552,749
Ensembl chr 1:102,539,124...102,554,027 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in ISO
IBA		 RGD
GO_Central		 PMID:21785167 GO_REF:0000033 RGD:6893661 NCBI chr 6:76,887,399...76,911,133
Ensembl chr 6:76,887,399...76,911,131 		JBrowse link
G SDR16C5 short chain dehydrogenase/reductase family 16C member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:7,660,882...7,679,705
Ensembl chr29:7,661,633...7,679,622 		JBrowse link
retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:21138835 RGD:6771354 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:15950969 PMID:21138835 GO_REF:0000107 RGD:6771322 RGD:6771354 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11013254), (PMID:11044606), (PMID:16241904) RGD
MGI
Ensembl		 PMID:11013254 PMID:11044606 PMID:15950969 PMID:16241904 PMID:21138835 GO_REF:0000107 RGD:6771322 RGD:6771354 NCBI chr 3:40,130,904...40,168,686
Ensembl chr 3:40,132,726...40,168,664 		JBrowse link
G CRABP2 cellular retinoic acid binding protein 2 ISO RGD PMID:15950969 RGD:6771322 NCBI chr 7:41,277,580...41,282,158
Ensembl chr 7:41,277,644...41,281,833 		JBrowse link
G DHRS9 dehydrogenase/reductase 9 ISO RGD PMID:15950969 PMID:21138835 RGD:6771322 RGD:6771354 NCBI chr36:13,859,935...13,881,432
Ensembl chr36:13,866,959...13,880,179 		JBrowse link
G RBP1 retinol binding protein 1 involved_in ISO
IEA		 RGD
InterPro		 PMID:15950969 GO_REF:0000002 RGD:6771322 NCBI chr23:35,677,844...35,698,194
Ensembl chr23:35,679,176...35,698,363 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chr29:21,886,014...21,912,451
Ensembl chr29:21,885,012...21,911,303 		JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:7,423,955...7,432,359
Ensembl chr28:7,428,772...7,432,370 		JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:21138835 GO_REF:0000107 RGD:6771354 NCBI chr17:50,633,397...50,653,882
Ensembl chr17:50,633,413...50,653,894 		JBrowse link
G CYP26C1 cytochrome P450, family 26, subfamily C, polypeptide 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:7,416,022...7,424,173 JBrowse link
G CYP2W1 cytochrome P450 family 2 subfamily W member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:15,883,248...15,889,508
Ensembl chr 6:15,881,636...15,889,186 		JBrowse link
retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:10191271)
(PMID:16207763)
(PMID:12808103), (PMID:12851412)		 MGI PMID:10191271 PMID:12808103 PMID:12851412 PMID:16207763 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14623241)
(PMID:16368932)
(PMID:8797830)		 RGD
MGI
Ensembl		 PMID:8797830 PMID:12547725 PMID:14623241 PMID:16368932 GO_REF:0000107 RGD:1576367 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17207476)
(PMID:16207763)		 Ensembl
MGI		 PMID:16207763 PMID:17207476 GO_REF:0000107 NCBI chr 3:40,130,904...40,168,686
Ensembl chr 3:40,132,726...40,168,664 		JBrowse link
G ALDH8A1 aldehyde dehydrogenase 8 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,672,422...27,695,029
Ensembl chr 1:27,673,024...27,694,868 		JBrowse link
G CRABP2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within ISO (PMID:9826179) MGI PMID:9826179 NCBI chr 7:41,277,580...41,282,158
Ensembl chr 7:41,277,644...41,281,833 		JBrowse link
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15531370) Ensembl
MGI		 PMID:15531370 GO_REF:0000107 NCBI chr28:7,423,955...7,432,359
Ensembl chr28:7,428,772...7,432,370 		JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,633,397...50,653,882
Ensembl chr17:50,633,413...50,653,894 		JBrowse link
G CYP27C1 cytochrome P450 family 27 subfamily C member 1 involved_in ISO (PMID:27059013) UniProt PMID:27059013 NCBI chr19:23,374,295...23,400,054 JBrowse link
G CYP2C18 cytochrome P450 2C21 involved_in ISO (PMID:11093772) UniProt PMID:11093772 NCBI chr28:8,727,010...8,750,427
Ensembl chr28:8,727,019...8,750,587 		JBrowse link
G CYP2S1 cytochrome P450 family 2 subfamily S member 1 involved_in ISO (PMID:12711469) UniProt PMID:12711469 NCBI chr 1:112,735,586...112,747,534
Ensembl chr 1:112,736,706...112,747,555 		JBrowse link
G CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4 involved_in ISO (PMID:11093772) UniProt PMID:11093772 NCBI chr 6:9,836,685...9,869,520
Ensembl chr 6:9,777,659...9,869,352 		JBrowse link
G LOC100856533 alcohol dehydrogenase E chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:21,422,428...21,437,058 JBrowse link
G LOC489851 cytochrome P450 3A12-like involved_in ISO (PMID:11093772) UniProt PMID:11093772 NCBI chr 6:9,722,401...9,758,759 JBrowse link
G RBP1 retinol binding protein 1 acts_upstream_of_or_within ISO (PMID:15193143) MGI PMID:15193143 NCBI chr23:35,677,844...35,698,194
Ensembl chr23:35,679,176...35,698,363 		JBrowse link
G RDH16 retinol dehydrogenase 16 ISO RGD PMID:7499345 RGD:1299624 NCBI chr10:1,124,322...1,134,138
Ensembl chr10:1,124,320...1,130,453 		JBrowse link
G SCPEP1 serine carboxypeptidase 1 ISO RGD PMID:11447226 RGD:70518 NCBI chr 9:31,770,494...31,803,741
Ensembl chr 9:31,774,602...31,803,741 		JBrowse link
retinol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:21,282,526...21,299,387
Ensembl chr32:21,282,890...21,299,328 		JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:12851412) MGI PMID:12851412 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789 		JBrowse link
G AWAT2 acyl-CoA wax alcohol acyltransferase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr  X:54,516,465...54,531,450
Ensembl chr  X:54,516,776...54,531,450 		JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 involved_in IEA
ISS		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr30:37,793,277...37,799,535
Ensembl chr30:37,793,508...37,796,866 		JBrowse link
G CYP1A2 cytochrome P450 family 1 subfamily A member 2 involved_in IEA
ISS		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr30:37,818,400...37,824,192
Ensembl chr30:37,799,140...37,824,135 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,273,281...30,278,554
Ensembl chr17:30,272,749...30,278,554 		JBrowse link
G CYP27C1 cytochrome P450 family 27 subfamily C member 1 involved_in ISO (PMID:27059013), (PMID:28701464) UniProt PMID:27059013 PMID:28701464 NCBI chr19:23,374,295...23,400,054 JBrowse link
G CYP2D15 cytochrome P450 family 2 subfamily D member 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,255,259...23,259,380
Ensembl chr10:23,255,249...23,259,298 		JBrowse link
G CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4 involved_in ISO (PMID:10681376) UniProt PMID:10681376 NCBI chr 6:9,836,685...9,869,520
Ensembl chr 6:9,777,659...9,869,352 		JBrowse link
G DHRS7 dehydrogenase/reductase 7 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:35,251,988...35,269,880
Ensembl chr 8:35,251,975...35,269,869 		JBrowse link
G LIPE lipase E, hormone sensitive type involved_in IEA GOC GO_REF:0000108 NCBI chr 1:111,987,862...112,006,492
Ensembl chr 1:111,988,029...112,006,461 		JBrowse link
G LOC100856533 alcohol dehydrogenase E chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:21,422,428...21,437,058 JBrowse link
G LRAT lecithin retinol acyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18093970) RGD
MGI
Ensembl
InterPro		 PMID:2253789 PMID:8460936 PMID:9244401 PMID:14642897 PMID:18093970 GO_REF:0000002 GO_REF:0000107 RGD:1599829 RGD:1599831 RGD:1599832 RGD:6484737 NCBI chr15:52,399,773...52,409,590
Ensembl chr15:52,399,544...52,406,176 		JBrowse link
G PLB1 phospholipase B1 ISO RGD PMID:8117729 RGD:6903951 NCBI chr17:22,420,679...22,558,318
Ensembl chr17:22,440,651...22,557,737 		JBrowse link
G PNPLA4 patatin like phospholipase domain containing 4 involved_in IEA GOC GO_REF:0000108 NCBI chr  X:4,775,702...4,925,027
Ensembl chr  X:4,874,240...4,924,976 		JBrowse link
G RBP1 retinol binding protein 1 acts_upstream_of_or_within ISO (PMID:15193143)
(PMID:15193143), (PMID:15765518)		 RGD
MGI		 PMID:14642897 PMID:15193143 PMID:15765518 RGD:6484737 NCBI chr23:35,677,844...35,698,194
Ensembl chr23:35,679,176...35,698,363 		JBrowse link
G RBP4 retinol binding protein 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:10232633)
(PMID:18093970)		 BHF-UCL
MGI		 PMID:10232633 PMID:18093970 NCBI chr28:7,822,936...7,830,735
Ensembl chr28:7,822,944...7,830,750 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chr29:21,886,014...21,912,451
Ensembl chr29:21,885,012...21,911,303 		JBrowse link
G RDH11 retinol dehydrogenase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:41,651,970...41,669,661
Ensembl chr 8:41,614,921...41,669,576 		JBrowse link
G RDH12 retinol dehydrogenase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:41,685,045...41,696,120
Ensembl chr 8:41,684,996...41,695,447 		JBrowse link
G RDH13 retinol dehydrogenase 13 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:102,539,363...102,552,749
Ensembl chr 1:102,539,124...102,554,027 		JBrowse link
G RDH14 retinol dehydrogenase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25533474) Ensembl
MGI		 PMID:25533474 GO_REF:0000107 NCBI chr17:13,843,278...13,848,498 JBrowse link
G RDH16 retinol dehydrogenase 16 ISO RGD PMID:7499345 RGD:1299624 NCBI chr10:1,124,322...1,134,138
Ensembl chr10:1,124,320...1,130,453 		JBrowse link
G RDH8 retinol dehydrogenase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755727) Ensembl
MGI		 PMID:15755727 GO_REF:0000107 NCBI chr20:51,029,633...51,035,910
Ensembl chr20:51,029,609...51,035,951 		JBrowse link
G RETSAT retinol saturase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,668,185...39,682,166
Ensembl chr17:39,668,256...39,680,560 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in ISO
IEA		 RGD
GOC		 PMID:3603006 GO_REF:0000108 RGD:9585656 NCBI chr 6:76,887,399...76,911,133
Ensembl chr 6:76,887,399...76,911,131 		JBrowse link
G SDR16C5 short chain dehydrogenase/reductase family 16C member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:7,660,882...7,679,705
Ensembl chr29:7,661,633...7,679,622 		JBrowse link
vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIPA lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:27354281) MGI PMID:27354281 NCBI chr26:38,892,771...38,918,441
Ensembl chr26:38,893,337...38,918,436 		JBrowse link
G LRAT lecithin retinol acyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11108736) Ensembl
MGI		 PMID:11108736 GO_REF:0000107 NCBI chr15:52,399,773...52,409,590
Ensembl chr15:52,399,544...52,406,176 		JBrowse link
G RBP1 retinol binding protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr23:35,677,844...35,698,194
Ensembl chr23:35,679,176...35,698,363 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17101
    cellular process 16595
      metabolic process 10708
        primary metabolic process 9413
          lipid metabolic process 1290
            isoprenoid metabolic process 103
              terpenoid metabolic process 81
                diterpenoid metabolic process 71
                  retinoid metabolic process 63
                    retinal metabolic process + 17
                    retinoic acid metabolic process + 23
                    retinol metabolic process 27
                    vitamin A metabolic process + 5
paths to the root