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Gene: ALDH1A1 (aldehyde dehydrogenase 1 family member A1) Canis lupus familiaris

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Symbol:

ALDH1A1

Name:

aldehyde dehydrogenase 1 family member A1

RGD ID:

12153861

Description:

ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); aminobutyraldehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); 9-cis-retinoic acid metabolic process (ortholog); apoptotic process (ortholog); PARTICIPATES IN cyclophosphamide pharmacodynamics pathway; cyclophosphamide pharmacokinetics pathway; ifosfamide pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Creutzfeldt-Jakob disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN axon (ortholog); synapse (ortholog)

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

aldehyde dehydrogenase 1A1; chromosome 1 GSS clone AHT1-34; retinal dehydrogenase 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	84,940,411 - 84,994,789 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	84,940,411 - 84,994,789 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	85,406,217 - 85,460,597 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	85,390,369 - 85,444,756 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	85,390,360 - 85,444,756 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	85,159,477 - 85,213,817 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	84,862,384 - 84,917,606 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	85,621,439 - 85,676,732 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

Creutzfeldt-Jakob disease (ISO)

Experimental Liver Cirrhosis (ISO)

liver disease (ISO)

melanoma (ISO)

metabolic dysfunction-associated steatotic liver disease (ISO)

Neoplastic Cell Transformation (ISO)

pancreatic cancer (ISO)

Parkinsonism (ISO)

renal cell carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

9-cis-retinoic acid biosynthetic process (ISO)

9-cis-retinoic acid metabolic process (ISO)

apoptotic process (ISO)

cellular detoxification of aldehyde (IEA)

embryonic eye morphogenesis (ISO)

estrous cycle (ISO)

fructosamine catabolic process (IEA)

fructose catabolic process (ISO)

gamma-aminobutyric acid biosynthetic process (ISO)

kidney development (ISO)

liver development (ISO)

maintenance of lens transparency (ISO)

midgut development (ISO)

negative regulation of cold-induced thermogenesis (ISO)

optic cup morphogenesis involved in camera-type eye development (ISO)

positive regulation of apoptotic process (ISO)

response to estradiol (ISO)

response to ethanol (ISO)

response to oxidative stress (ISO)

response to retinoic acid (ISO)

response to xenobiotic stimulus (ISO)

retinoic acid biosynthetic process (ISO)

retinoic acid metabolic process (ISO)

retinoid metabolic process (ISO)

retinol metabolic process (ISO)

Cellular Component

axon (ISO)

cytoplasm (IEA)

cytosol (IEA)

synapse (ISO)

Molecular Function

3-chloroallyl aldehyde dehydrogenase activity (ISO)

3-deoxyglucosone dehydrogenase activity (IEA)

aldehyde dehydrogenase (NAD+) activity (IEA,ISO)

aminobutyraldehyde dehydrogenase (NAD+) activity (ISO)

benzaldehyde dehydrogenase (NAD+) activity (ISO)

identical protein binding (ISO)

oxidoreductase activity (IEA)

oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (IEA)

protein binding (ISO)

retinal dehydrogenase activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

cyclophosphamide pharmacodynamics pathway (ISO)

cyclophosphamide pharmacokinetics pathway (ISO)

ifosfamide pharmacodynamics pathway (ISO)

ifosfamide pharmacokinetics pathway (ISO)

neviparine pharmacokinetics pathway (ISO)

retinoic acid metabolic pathway (ISO)

retinol metabolic pathway (ISO)

vitamin A deficiency pathway (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

ALDH1A1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	84,940,411 - 84,994,789 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	84,940,411 - 84,994,789 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	85,406,217 - 85,460,597 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	85,390,369 - 85,444,756 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	85,390,360 - 85,444,756 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	85,159,477 - 85,213,817 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	84,862,384 - 84,917,606 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	85,621,439 - 85,676,732 (+)	NCBI		UU_Cfam_GSD_1.0

ALDH1A1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	72,900,671 - 72,953,053 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	72,900,671 - 73,080,442 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	75,515,587 - 75,567,969 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	74,705,407 - 74,757,789 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	72,745,141 - 72,797,523	NCBI
Celera	9	46,088,447 - 46,140,830 (-)	NCBI		Celera
Cytogenetic Map	9	q21.13	NCBI
HuRef	9	45,338,144 - 45,390,773 (-)	NCBI		HuRef
CHM1_1	9	75,662,616 - 75,715,255 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	85,051,589 - 85,103,957 (-)	NCBI		T2T-CHM13v2.0

Aldh1a1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	20,469,947 - 20,620,827 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	20,470,079 - 20,620,829 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	20,492,583 - 20,643,463 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	20,492,715 - 20,643,465 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	20,676,472 - 20,717,952 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	20,669,079 - 20,710,559 (+)	NCBI		MGSCv36	mm8
Celera	19	21,323,202 - 21,366,435 (+)	NCBI		Celera
Cytogenetic Map	19	B	NCBI
cM Map	19	13.91	NCBI

Aldh1a1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	227,426,939 - 227,579,497 (+)	NCBI		GRCr8
mRatBN7.2	1	218,000,470 - 218,152,962 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	218,042,127 - 218,152,961 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	226,448,507 - 226,490,531 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	233,385,074 - 233,427,098 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	226,203,095 - 226,245,121 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	238,222,689 - 238,264,381 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	238,222,521 - 238,264,330 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	245,340,587 - 245,562,970 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	223,731,675 - 223,773,285 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	223,895,697 - 223,937,307 (+)	NCBI
Celera	1	215,379,207 - 215,421,068 (+)	NCBI		Celera
Cytogenetic Map	1	q51	NCBI

ALDH1A1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	72,085,972 - 72,265,332 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	72,091,914 - 72,271,273 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	51,737,305 - 51,916,648 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	71,680,352 - 71,859,144 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	71,680,890 - 71,814,085 (-)	Ensembl	panpan1.1		panPan2

Aldh1a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	132,159,211 - 132,303,931 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936503	8,868,961 - 8,918,532 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936503	8,869,073 - 8,953,726 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ALDH1A1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	226,161,299 - 226,217,308 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	226,163,347 - 226,217,342 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	252,778,605 - 252,808,516 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ALDH1A1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	83,949,529 - 84,092,452 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	83,949,399 - 84,009,003 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	72,378,038 - 72,569,020 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Aldh1a1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624811	505,101 - 563,855 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624811	505,297 - 563,795 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ALDH1A1
652 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001286977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ405205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BF228903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN863549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN863981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN864805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN865356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN872320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000002823 ⟹ ENSCAFP00000002617

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	84,940,411 - 84,994,789 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000044464 ⟹ ENSCAFP00000042427

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	84,940,411 - 84,992,059 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845000073 ⟹ ENSCAFP00845000054

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	85,390,360 - 85,442,026 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845000075 ⟹ ENSCAFP00845000056

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	85,390,369 - 85,444,756 (+)	Ensembl

RefSeq Acc Id:

NM_001286977 ⟹ NP_001273906

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	84,940,411 - 84,994,789 (+)	NCBI
Dog10K_Boxer_Tasha	1	85,406,217 - 85,460,597 (+)	NCBI
ROS_Cfam_1.0	1	85,390,369 - 85,444,756 (+)	NCBI
UMICH_Zoey_3.1	1	85,159,477 - 85,213,817 (+)	NCBI
UNSW_CanFamBas_1.0	1	84,862,384 - 84,917,606 (+)	NCBI
UU_Cfam_GSD_1.0	1	85,621,439 - 85,676,732 (+)	NCBI

Sequence:

show sequence

AAATCGCTGAGCCTGTCACCTGTGTTCCAGAAGCCGAACCAGAAATGTCGTCCTCAGCCATGCC
AGACTTACCTGTCCCACTCACCAATTTGACATATAAATATACTAAGATTTTCATAAACAATGAA
TGGCATAACTCAGTGAGTGGCAAGAAATTTCCTGTCTTTAATCCTGCAACGGAGGAGAAGATCT
GTGAAGTAGAAGAAGGAGATAAGGAGGACATTGACAAAGCAGTGAAGGCCGCAAGACAGGCTTT
TCAGATTGGCTCTCCATGGCGCACTATGAATGCTTCAGAAAGGGGGCGGCTAATATACAAGTTG
GCTGACTTAATTGAAAGAGATCGTCTTCTCCTGGCAACAATGGAGTCAATAAATGGTGGAAAAC
TCTTCTCCAATTCGTATACATTGGATCTGGGAGGCTGCGTAGCAACATTACGCTACTGTGCCGG
GTGGGCTGACAAGATACATGGCCGCACAATACCCGTTGATGGAAACTTTTTTGGTTATACAAGA
CATGAGCCTATTGGAGTATGTGGCCAAATCATTCCTTGGAATTTCCCGTTGTTCATGTTCATTT
GGAAGATAGGGCCTGCCCTTTGCTGTGGAAATACGGTGGTGGTCAAACCTGCAGAGCAAACTCC
TCTCACTGCTCTTCATGTGGCATCTTTAATACAAGAGGCAGGTTTCCCTCCCGGAGTAGTGAAC
ATCGTCCCTGGGTATGGGCCTACTGCTGGGGCTGCCATTTCTTCCCACATGGATATAGACAAAG
TGGCCTTCACCGGATCTACAGAGGTTGGCAAAATGATCAAAGAAGCTGCCGGGAAAAGCAATCT
GAAGAGGGTGACCCTGGAGCTTGGTGGAAAGAGCCCCTTCATTGTGTTTGCTGACTCCGACTTG
GACAGTGCTGTTGAAGTTGCACACCAGGCGTTATTCTATCACCAAGGCCAGTGCTGTATAGCTG
CATCCAGGCTTTTTGTGGAAGAATCAATTTACGATGAGTTTGTTCGGAGGAGTGTTGAACGGGC
TAAAAAGTATGTTCTTGGAAACCCTCTGACCCCAGGAGTCAGTCAAGGCCCTCAAATTGATAAG
AAACAATATGAAAAAATCCTTGACCTCATTGAGAGTGGAAAGAAAGAAGGAGCCAAACTGGAGT
GTGGTGGAGGCCCATGGGGGAATAAAGGCTTCTTCATCCAGCCCACCGTTTTCTCAAATGTGAC
GGACGAGATGCGCATCGCCAAAGAGGAGATATTTGGACCAGTGCAGCAAATTATGAAGTTTAAA
TCTTTAGATGATGTGATCAAGAGAGCAAACAATACCCACTATGGCTTAGCAGCAGGAATCTTTA
CCAAAGATATTGATAAAGCCATAACAGTCTCCTCCGCTCTGCAGGCTGGGACAGTGTGGGTGAA
TTGCTATAGTGTGGTATCTCCCCAGTGTCCTTTTGGTGGATTCAAGATGTCTGGAAATGGAAGA
GAACTGGGAGAATATGGTCTCCAAGAATACACAGAGGTCAAGATGGTCACAATGAAAATTTCTC
AGAAGAATTCATAAAAACCACAAGAATGAAGCAAAGAATCTTCAATGACTAAGCATCTCCTACA
GTTGCTAATATATTGCAGTGGGTTTTGAATACAAAATTGTGCTTTTCTTGATTTTTTTAAACAT
AAGCGAATCACATTAGCATTAAAACTACAGATAGAAAACTTGACATGTAGCTTATTCTGAAAGA
ATCCTTTATCTTCTAGTATGTGTCCCCAAGTCATATCTGTAAAAAAAGGATGGATCTAATGTAA
GACTTCTCCAAACTCTGTAATAGTTATGTGCTTCTTCTTGTAACTACTTTTCCAGGATAATCAT
GTTATAGAAGAGGACCAGTTGTCATGTAGCTTATTTCTCTAACATCCTCTTAAAGTCCTTAACA
TACCTTTGAACTGGGGAGATGTGCTCTGTTCCTAATAGTTGTGAAATCAGTGGAGTTTGTTGAA
ATGTTACTTAGACTATCATGTCTGCTTGTCAAATGTAGTAATGCCTGTAATACCTAGCTGTAAT
CTATATATAAAGCTTAATAAAAACAACCTTGCATGATTTTTGTT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001273906	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000002617.4
	ENSCAFP00000042427.1
	ENSCAFP00030036875.1
	ENSCAFP00040000196.1
	ENSCAFP00040000205.1
	ENSCAFP00040000222.1
	ENSCAFP00845000054.1
	ENSCAFP00845000056
	ENSCAFP00845000056.1

RefSeq Acc Id:

NP_001273906 ⟸ NM_001286977

- UniProtKB:

A0A8C0RUB5 (UniProtKB/TrEMBL), A0A8I3M9Q4 (UniProtKB/TrEMBL), A0A8C0PJW7 (UniProtKB/TrEMBL), A0A8I3RNV9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSSAMPDLPVPLTNLTYKYTKIFINNEWHNSVSGKKFPVFNPATEEKICEVEEGDKEDIDKAV
KAARQAFQIGSPWRTMNASERGRLIYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVA
TLRYCAGWADKIHGRTIPVDGNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVV
KPAEQTPLTALHVASLIQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKE
AAGKSNLKRVTLELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFV
RRSVERAKKYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGNKGFFIQP
TVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGLAAGIFTKDIDKAITVSSALQ
AGTVWVNCYSVVSPQCPFGGFKMSGNGRELGEYGLQEYTEVKMVTMKISQKNS

hide sequence

Ensembl Acc Id:

ENSCAFP00000042427 ⟸ ENSCAFT00000044464

Ensembl Acc Id:

ENSCAFP00000002617 ⟸ ENSCAFT00000002823

Ensembl Acc Id:

ENSCAFP00845000054 ⟸ ENSCAFT00845000073

Ensembl Acc Id:

ENSCAFP00845000056 ⟸ ENSCAFT00845000075

Protein Domains

Aldehyde dehydrogenase

Promoters

RGD ID:

13682086

Promoter ID:

EPDNEW_C154

Type:

multiple initiation site

Name:

ALDH1A1_1

Description:

aldehyde dehydrogenase 1 family member A1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	84,940,402 - 84,940,462	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000001791	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030022975	UniProtKB/TrEMBL
	ENSCAFG00040000169	UniProtKB/TrEMBL
	ENSCAFG00845000042	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000002823.6	UniProtKB/TrEMBL
	ENSCAFT00000044464.4	UniProtKB/TrEMBL
	ENSCAFT00030042266.1	UniProtKB/TrEMBL
	ENSCAFT00040000257.1	UniProtKB/TrEMBL
	ENSCAFT00040000268.1	UniProtKB/TrEMBL
	ENSCAFT00040000287.1	UniProtKB/TrEMBL
	ENSCAFT00845000073.1	UniProtKB/TrEMBL
	ENSCAFT00845000075	ENTREZGENE
	ENSCAFT00845000075.1	UniProtKB/TrEMBL
InterPro	Ald_DH/histidinol_DH	UniProtKB/TrEMBL
	Ald_DH_C	UniProtKB/TrEMBL
	Ald_DH_CS_CYS	UniProtKB/TrEMBL
	Ald_DH_CS_GLU	UniProtKB/TrEMBL
	Ald_DH_N	UniProtKB/TrEMBL
	Aldehyde_DH_dom	UniProtKB/TrEMBL
KEGG Report	cfa:476323	UniProtKB/TrEMBL
NCBI Gene	ALDH1A1	ENTREZGENE
PANTHER	ALDEHYDE DEHYDROGENASE-RELATED	UniProtKB/TrEMBL
	RETINAL DEHYDROGENASE 1	UniProtKB/TrEMBL
Pfam	Aldedh	UniProtKB/TrEMBL
PROSITE	ALDEHYDE_DEHYDR_CYS	UniProtKB/TrEMBL
	ALDEHYDE_DEHYDR_GLU	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53720	UniProtKB/TrEMBL
UniProt	A0A8C0PJW7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0PJW8_CANLF	UniProtKB/TrEMBL
	A0A8C0RUB5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3M9Q4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RNV9	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:37782	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB

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Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB