ONTOLOGY REPORT - ANNOTATIONS
Term: retinal metabolic process
Accession: GO:0042574
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Definition: The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A.
Synonyms: exact_synonym: retinal metabolism; retinaldehyde metabolic process; retinaldehyde metabolism
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Akr1b10
aldo-keto reductase family 1 member B10
IDA
RGD
PMID:20709016
RGD:6903952
NCBI chr 4:61,813,265...61,830,371
Ensembl chr 4:61,771,970...61,828,657
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Akr1c3
aldo-keto reductase family 1, member C3
involved_in
ISO
(PMID:21851338)
RGD
PMID:21851338
NCBI chr17:69,761,126...69,778,021
Ensembl chr17:69,761,118...69,778,021
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Aldh1a2
aldehyde dehydrogenase 1 family, member A2
acts_upstream_of_or_within
ISO
(MGI:2655944|PMID:12610736)
RGD
PMID:12610736
MGI:2655944
NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
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Aldh1a3
aldehyde dehydrogenase 1 family, member A3
involved_in
IEA ISO
GO_REF:0000107 (PMID:11585737)
Ensembl RGD
PMID:11585737
GO_REF:0000107
NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
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Aldh8a1
aldehyde dehydrogenase 8 family, member A1
involved_in
ISO
(PMID:11007799)
RGD
PMID:11007799
NCBI chr 1:16,910,043...16,929,465
Ensembl chr 1:16,910,069...16,930,481
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Bco1
beta-carotene oxygenase 1
acts_upstream_of_or_within involved_in
IEA ISO IBA
GO_REF:0000107 MGI:2177469 (MGI:5638293|PMID:25701869) PMID:21873635
Ensembl RGD
PMID:25701869 , PMID:21873635 , PMID:21873635
GO_REF:0000107 MGI:5638293 , RGD:13792537 , RGD:13792537
NCBI chr19:49,637,059...49,673,577
Ensembl chr19:49,637,016...49,673,808
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Bco2
beta-carotene oxygenase 2
acts_upstream_of_or_within involved_in
ISO IBA
MGI:1926923 (MGI:5638293|PMID:25701869) PMID:21873635
RGD
PMID:25701869 , PMID:21873635 , PMID:21873635
MGI:5638293 , RGD:13792537 , RGD:13792537
NCBI chr 8:54,965,577...54,990,604
Ensembl chr 8:54,965,583...54,998,864
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Cyp1b1
cytochrome P450, family 1, subfamily b, polypeptide 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5572883|PMID:15258110) GO_REF:0000024 (PMID:15258110)
Ensembl RGD UniProt
PMID:15258110
GO_REF:0000024 GO_REF:0000107 MGI:5572883
NCBI chr 6:2,308,179...2,316,739
Ensembl chr 6:2,307,808...2,316,722
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Dhrs13
dehydrogenase/reductase 13
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr10:65,329,407...65,334,533
Ensembl chr10:65,329,940...65,334,500
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Dhrs4
dehydrogenase/reductase 4
acts_upstream_of_or_within
ISO
(MGI:2655870|PMID:12680773)
RGD
PMID:12680773
MGI:2655870
NCBI chr15:34,155,043...34,167,073
Ensembl chr15:34,155,504...34,167,072
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Rbp4
retinol binding protein 4
acts_upstream_of_or_within
ISO
MGI:2445721 (MGI:2150869|PMID:11562477)
RGD
PMID:11562477
MGI:2150869
NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
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Rdh10
retinol dehydrogenase 10
involved_in
ISO
(PMID:19458327)
RGD
PMID:19458327
NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
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Rdh11
retinol dehydrogenase 11
involved_in
ISO
(PMID:12807874)
RGD
PMID:12807874
NCBI chr 6:102,356,498...102,372,618
Ensembl chr 6:102,356,492...102,372,611
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Rdh13
retinol dehydrogenase 13
involved_in
ISO IBA
(PMID:18039331) PMID:21873635
RGD
PMID:18039331 , PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr 1:72,956,017...72,983,811
Ensembl chr 1:72,956,026...72,984,350
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Rpe65
retinoid isomerohydrolase RPE65
acts_upstream_of_or_within
IMP ISO
MGI:2181399 (MGI:2180434|PMID:11897783)
RGD
PMID:11897783 , PMID:21785167
MGI:2180434 , RGD:6893661
NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197
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Sdr16c5
short chain dehydrogenase/reductase family 16C, member 5
involved_in
ISO IBA
(PMID:18926804), (PMID:19102727) PMID:21873635
RGD
PMID:18926804 PMID:19102727 , PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr 5:16,904,926...16,930,111
Ensembl chr 5:16,904,926...16,930,075
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