PNLIP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 28 | 27,139,028 - 27,156,457 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 28 | 27,139,230 - 27,212,178 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 28 | 27,289,546 - 27,307,018 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 28 | 27,675,675 - 27,693,147 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 28 | 27,675,917 - 27,749,003 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 28 | 27,230,205 - 27,247,650 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 28 | 27,249,644 - 27,267,077 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 28 | 27,438,556 - 27,456,027 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
PNLIP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 10 | 116,545,931 - 116,567,855 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 116,545,931 - 116,567,855 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 10 | 118,305,443 - 118,327,367 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 118,295,418 - 118,317,357 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 10 | 118,295,448 - 118,317,356 | NCBI | | | | | Celera | 10 | 112,034,704 - 112,056,644 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q25.3 | NCBI | | | | | HuRef | 10 | 111,932,653 - 111,954,591 (+) | NCBI | | HuRef | | | CHM1_1 | 10 | 118,588,590 - 118,610,538 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 117,439,962 - 117,461,884 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pnlip (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 19 | 58,658,797 - 58,670,231 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 19 | 58,640,930 - 58,670,220 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 19 | 58,670,365 - 58,681,799 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 19 | 58,652,498 - 58,681,788 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 19 | 58,744,855 - 58,756,278 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 19 | 58,723,615 - 58,735,038 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 19 | 60,867,340 - 60,878,784 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | D2 | NCBI | | | | | cM Map | 19 | 54.46 | NCBI | | | | |
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Pnlip (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 267,760,073 - 267,797,797 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 257,774,012 - 257,811,656 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 257,798,581 - 257,811,654 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 266,009,226 - 266,022,367 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 272,715,238 - 272,728,379 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 265,351,509 - 265,364,696 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 279,798,187 - 279,811,372 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 279,798,187 - 279,811,372 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 287,136,617 - 287,172,914 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 265,107,812 - 265,120,969 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 265,318,856 - 265,332,014 (+) | NCBI | | | | | Celera | 1 | 253,456,158 - 253,469,343 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q55 | NCBI | | | | |
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PNLIP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 8 | 128,391,967 - 128,445,865 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 128,428,918 - 128,451,163 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 113,067,443 - 113,158,473 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 10 | 116,568,110 - 116,589,729 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 10 | 116,568,273 - 116,589,729 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PNLIP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 14 | 126,772,911 - 126,790,001 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 126,771,920 - 126,789,097 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 138,017,775 - 138,032,310 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PNLIP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 9 | 109,330,050 - 109,375,687 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 109,352,806 - 109,375,670 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 70,600,324 - 70,623,276 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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