AWAT2 (acyl-CoA wax alcohol acyltransferase 2) - Rat Genome Database

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Gene: AWAT2 (acyl-CoA wax alcohol acyltransferase 2) Canis lupus familiaris
Analyze
Symbol: AWAT2
Name: acyl-CoA wax alcohol acyltransferase 2
RGD ID: 12425773
Description: ENCODES a protein that exhibits long-chain-alcohol O-fatty-acyltransferase activity (ortholog); INVOLVED IN wax biosynthetic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); syndromic X-linked intellectual disability Lubs type (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); integral component of membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: DGAT2L4; diacylglycerol O-acyltransferase 2-like 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X54,516,465 - 54,531,450 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX54,516,776 - 54,531,450 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX45,342,795 - 45,357,915 (-)NCBI
ROS_Cfam_1.0X55,483,082 - 55,498,202 (-)NCBI
ROS_Cfam_1.0 EnsemblX55,483,069 - 55,498,100 (-)Ensembl
UMICH_Zoey_3.1X53,452,127 - 53,467,243 (-)NCBI
UNSW_CanFamBas_1.0X54,782,920 - 54,798,043 (-)NCBI
UU_Cfam_GSD_1.0X54,710,080 - 54,725,204 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Genomics

Comparative Map Data
AWAT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X54,516,465 - 54,531,450 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX54,516,776 - 54,531,450 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX45,342,795 - 45,357,915 (-)NCBI
ROS_Cfam_1.0X55,483,082 - 55,498,202 (-)NCBI
ROS_Cfam_1.0 EnsemblX55,483,069 - 55,498,100 (-)Ensembl
UMICH_Zoey_3.1X53,452,127 - 53,467,243 (-)NCBI
UNSW_CanFamBas_1.0X54,782,920 - 54,798,043 (-)NCBI
UU_Cfam_GSD_1.0X54,710,080 - 54,725,204 (-)NCBI
AWAT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X70,040,542 - 70,049,938 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 EnsemblX70,040,542 - 70,049,938 (-)EnsemblGRCh38hg38GRCh38
GRCh37X69,260,392 - 69,269,788 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X69,177,117 - 69,186,513 (-)NCBINCBI36hg18NCBI36
CeleraX69,613,775 - 69,623,166 (-)NCBI
Cytogenetic MapXq13.1NCBI
HuRefX63,081,194 - 63,090,585 (-)NCBIHuRef
CHM1_1X69,154,000 - 69,163,391 (-)NCBICHM1_1
T2T-CHM13v2.0X68,473,894 - 68,483,288 (-)NCBI
Awat2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X99,445,827 - 99,537,885 (-)NCBIGRCm39mm39
GRCm39 EnsemblX99,445,827 - 99,486,323 (-)Ensembl
GRCm38X100,402,221 - 100,494,278 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX100,402,221 - 100,442,717 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X97,597,560 - 97,607,901 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X96,604,940 - 96,615,281 (-)NCBImm8
CeleraX87,327,787 - 87,338,155 (-)NCBICelera
Cytogenetic MapXC3NCBI
Awat2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X65,482,240 - 65,490,500 (-)NCBImRatBN7.2
mRatBN7.2 EnsemblX65,481,929 - 65,527,625 (-)Ensembl
Rnor_6.0X70,224,761 - 70,233,021 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX70,224,654 - 70,270,693 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X71,097,874 - 71,106,134 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X88,395,929 - 88,404,189 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX65,843,059 - 65,851,319 (-)NCBICelera
Cytogenetic MapXq22NCBI
Awat2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554759,592,984 - 9,634,811 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554759,594,157 - 9,634,596 (-)NCBIChiLan1.0ChiLan1.0
AWAT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X69,372,246 - 69,381,644 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX69,372,246 - 69,381,644 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X59,308,600 - 59,318,940 (-)NCBIMhudiblu_PPA_v0panPan3
Awat2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X47,660,270 - 47,671,248 (+)NCBI
SpeTri2.0NW_0049367771,562,900 - 1,574,018 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AWAT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX56,104,509 - 56,114,744 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X56,101,635 - 56,108,243 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X63,301,798 - 63,311,924 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AWAT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X59,863,353 - 59,872,621 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 EnsemblX59,863,866 - 59,871,925 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660651,731,627 - 1,740,942 (-)NCBIVero_WHO_p1.0
Awat2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462489141,890 - 52,628 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462489149,479 - 53,290 (+)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system integumental system musculoskeletal system nervous system reproductive system
High
Medium
Low 2 2
Below cutoff 3 2 4 4 3 6 6

Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000026522   ⟹   ENSCAFP00000024629
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX54,516,776 - 54,531,450 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845051112   ⟹   ENSCAFP00845040075
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 EnsemblX55,483,069 - 55,498,100 (-)Ensembl
RefSeq Acc Id: XM_038448972   ⟹   XP_038304900
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X55,483,082 - 55,498,202 (-)NCBI
RefSeq Acc Id: XM_038524955   ⟹   XP_038380883
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X53,452,127 - 53,467,243 (-)NCBI
RefSeq Acc Id: XM_038586524   ⟹   XP_038442452
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X54,710,080 - 54,725,204 (-)NCBI
RefSeq Acc Id: XM_038650944   ⟹   XP_038506872
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X54,782,920 - 54,798,043 (-)NCBI
RefSeq Acc Id: XM_549056   ⟹   XP_549056
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X54,516,465 - 54,531,450 (-)NCBI
Dog10K_Boxer_TashaX45,342,795 - 45,357,915 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_038304900 (Get FASTA)   NCBI Sequence Viewer  
  XP_038380883 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442452 (Get FASTA)   NCBI Sequence Viewer  
  XP_038506872 (Get FASTA)   NCBI Sequence Viewer  
  XP_549056 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_549056   ⟸   XM_549056
- Sequence:
RefSeq Acc Id: ENSCAFP00000024629   ⟸   ENSCAFT00000026522
RefSeq Acc Id: XP_038380883   ⟸   XM_038524955
RefSeq Acc Id: XP_038506872   ⟸   XM_038650944
RefSeq Acc Id: XP_038304900   ⟸   XM_038448972
RefSeq Acc Id: XP_038442452   ⟸   XM_038586524
RefSeq Acc Id: ENSCAFP00845040075   ⟸   ENSCAFT00845051112


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000016752 Ensembl
  ENSCAFG00845028901 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00845040075 ENTREZGENE
  ENSCAFP00845040075.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845051112 ENTREZGENE
  ENSCAFT00845051112.1 UniProtKB/TrEMBL
InterPro DAGAT UniProtKB/TrEMBL
NCBI Gene AWAT2 ENTREZGENE
Pfam DAGAT UniProtKB/TrEMBL
UniProt A0A8I3Q6K5_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:38322 ENTREZGENE