RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: Carpenter syndrome
Accession: DOID:0060234
browse the term
Definition: An acrocephalosyndactylia characterized by craniosynostosis, acrocephaly, obesity, syndactyly and polydactyly. (DO)
Synonyms: exact_synonym: ACPS 2; ACPS II; acrocephalopolysyndactyly type 2; acrocephalopolysyndactyly type II
primary_id: MESH:C563187
xref: GARD:6003 ; MIM:PS201000 ; NCI:C98873 ; ORDO:65759
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Bag2
BAG cochaperone 2
ISO
ClinVar Annotator: match by term: Acrocephalopolysyndactyly Type II | ClinVar Annotator: match by term: Carpenter syndrome
ClinVar
NCBI chr 9:35,970,033...35,980,677
Ensembl chr 9:35,970,033...35,980,721
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Megf8
multiple EGF-like-domains 8
ISO ISS
CTD Direct Evidence: marker/mechanism OMIM:201000 | OMIM:614976 ClinVar Annotator: match by term: Carpenter syndrome
CTD MouseDO ClinVar
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
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Rab23
RAB23, member RAS oncogene family
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: ACPS 2 | ClinVar Annotator: match by term: Acrocephalopolysyndactyly Type II | ClinVar Annotator: match by term: Carpenter syndrome
CTD ClinVar
PMID:9536098 PMID:16199547 PMID:17503333 PMID:17576681 PMID:20358613 PMID:21412941 PMID:23599695 PMID:24458945 PMID:25168863 PMID:25741868 PMID:27872624 PMID:28213671 PMID:28492532 More...
NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927
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Bag2
BAG cochaperone 2
ISO
ClinVar Annotator: match by term: Carpenter syndrome 1
ClinVar
NCBI chr 9:35,970,033...35,980,677
Ensembl chr 9:35,970,033...35,980,721
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Rab23
RAB23, member RAS oncogene family
ISO
ClinVar Annotator: match by term: Carpenter syndrome 1 | ClinVar Annotator: match by term: RAB23-related condition
OMIM ClinVar
PMID:17503333 PMID:20358613 PMID:21412941 PMID:23599695 PMID:24458945 PMID:25741868 PMID:27872624 PMID:28213671 PMID:28492532 More...
NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927
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Actmap
actin maturation protease
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,490,313...82,499,841
Ensembl chr 1:82,490,363...82,499,841
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Akt2
AKT serine/threonine kinase 2
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,877,228...82,933,828
Ensembl chr 1:82,883,547...82,933,817
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Arhgef1
Rho guanine nucleotide exchange factor 1
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,499,026...80,520,954
Ensembl chr 1:80,499,131...80,520,953
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Atp1a3
ATPase Na+/K+ transporting subunit alpha 3
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,572,790...80,601,936
Ensembl chr 1:80,572,796...80,601,918
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Axl
Axl receptor tyrosine kinase
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265
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B3gnt8
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,135,602...81,138,501
Ensembl chr 1:81,135,499...81,142,263
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B9d2
B9 domain containing 2
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,189,395...81,195,383
Ensembl chr 1:81,189,405...81,195,356
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Bckdha
branched chain keto acid dehydrogenase E1 subunit alpha
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,138,946...81,167,765
Ensembl chr 1:81,138,947...81,167,862
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Blvrb
biliverdin reductase B
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,738,646...82,756,312
Ensembl chr 1:82,738,695...82,770,375
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C1h19orf47
similar to human chromosome 19 open reading frame 47
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,844,309...82,871,187
Ensembl chr 1:82,844,286...82,868,320
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Ccdc97
coiled-coil domain containing 97
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,219,225...81,227,017
Ensembl chr 1:81,219,230...81,226,986
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Cd79a
CD79a molecule
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,493,581...80,497,936
Ensembl chr 1:80,493,581...80,497,935
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Ceacam15
CEA cell adhesion molecule 15
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:77,368,376...77,373,343
Ensembl chr 1:77,368,966...77,372,663
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Ceacam4
CEA cell adhesion molecule 4
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,376,667...80,382,943
Ensembl chr 1:80,376,648...80,382,915
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Ceacam6
CEA cell adhesion molecule 6
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,416,531...80,434,668
Ensembl chr 1:80,416,531...80,434,668
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Cic
capicua transcriptional repressor
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,853,920...80,880,537
Ensembl chr 1:80,853,920...80,880,532
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Cnfn
cornifelin
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,949,699...80,953,747
Ensembl chr 1:80,951,600...80,953,747
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Coq8b
coenzyme Q8B
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,525,578...82,549,182
Ensembl chr 1:82,526,568...82,549,180
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Cyp2a1
cytochrome P450, family 2, subfamily a, polypeptide 1
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,231,611...82,244,887
Ensembl chr 1:82,231,611...82,244,887
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Cyp2a3
cytochrome P450, family 2, subfamily a, polypeptide 3
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,171,914...82,179,980
Ensembl chr 1:82,169,949...82,179,979
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Cyp2b3
cytochrome P450, family 2, subfamily b, polypeptide 3
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,652,762...81,732,153
Ensembl chr 1:81,652,787...81,732,143
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Cyp2f4
cytochrome P450, family 2, subfamily f, polypeptide 4
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,416,107...82,429,897
Ensembl chr 1:82,416,130...82,429,896
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Cyp2s1
cytochrome P450, family 2, subfamily s, polypeptide 1
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,309,948...81,325,303
Ensembl chr 1:81,310,451...81,325,303
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Dedd2
death effector domain containing 2
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,789,084...80,807,789
Ensembl chr 1:80,792,000...80,807,714
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Dll3
delta like canonical Notch ligand 3
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750
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Dmac2
distal membrane arm assembly component 2
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,128,760...81,134,810
Ensembl chr 1:81,128,857...81,134,812
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Dmrtc2
DMRT-like family C2
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,466,259...80,473,883
Ensembl chr 1:80,466,132...80,473,531
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Dyrk1b
dual specificity tyrosine phosphorylation regulated kinase 1B
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,479,168...83,497,011
Ensembl chr 1:83,479,147...83,487,169
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Egln2
egl-9 family hypoxia-inducible factor 2
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,451,554...82,459,809
Ensembl chr 1:82,451,555...82,459,751
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Eid2
EP300 interacting inhibitor of differentiation 2
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,538,274...83,539,599
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Eid2b
EP300 interacting inhibitor of differentiation 2B
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,545,530...83,547,338
Ensembl chr 1:83,545,563...83,546,734
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Erf
Ets2 repressor factor
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,829,935...80,838,388
Ensembl chr 1:80,829,935...80,838,388
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Erich4
glutamate-rich 4
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,123,556...81,125,296
Ensembl chr 1:81,123,556...81,125,296
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Exosc5
exosome component 5
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,168,128...81,177,266
Ensembl chr 1:81,166,023...81,177,265
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Fbl
fibrillarin
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,469,832...83,478,932
Ensembl chr 1:83,469,832...83,478,932
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Fcgbp
Fc gamma binding protein
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,374,979...83,413,082
Ensembl chr 1:83,372,127...83,413,083
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Grik5
glutamate ionotropic receptor kainate type subunit 5
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,605,878...80,667,896
Ensembl chr 1:80,605,892...80,667,125
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Gsk3a
glycogen synthase kinase 3 alpha
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
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Hipk4
homeodomain interacting protein kinase 4
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,810,708...82,821,080
Ensembl chr 1:82,810,708...82,821,077
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Hnrnpul1
heterogeneous nuclear ribonucleoprotein U-like 1
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,228,404...81,264,121
Ensembl chr 1:81,228,404...81,262,592
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Itpkc
inositol-trisphosphate 3-kinase C
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,500,957...82,522,533
Ensembl chr 1:82,500,957...82,522,779
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Lgals5
galectin 5
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr10:63,853,949...63,857,198
Ensembl chr10:63,853,935...63,857,153
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Lipe
lipase E, hormone sensitive type
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,965,612...80,984,313
Ensembl chr 1:80,965,627...80,984,310
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Ltbp4
latent transforming growth factor beta binding protein 4
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,600,136...82,634,346
Ensembl chr 1:82,600,136...82,632,178
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Lypd4
Ly6/Plaur domain containing 4
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,460,487...80,466,105
Ensembl chr 1:80,460,487...80,466,011
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Map3k10
mitogen activated protein kinase kinase kinase 10
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,955,784...82,974,084
Ensembl chr 1:82,955,207...82,974,084
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Megf8
multiple EGF-like-domains 8
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
OMIM ClinVar
PMID:9536098 PMID:16199547 PMID:17576681 PMID:23063620 PMID:25326635 PMID:25741868 PMID:28492532 PMID:28914635 PMID:29168297 More...
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
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Mia
MIA SH3 domain containing
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,473,677...82,476,378
Ensembl chr 1:82,473,678...82,475,370
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Numbl
NUMB-like, endocytic adaptor protein
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776
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Pafah1b3
platelet-activating factor acetylhydrolase 1b, catalytic subunit 3
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,881,263...80,883,789
Ensembl chr 1:80,881,309...80,883,893
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Pld3
phospholipase D family, member 3
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,821,863...82,844,280
Ensembl chr 1:82,821,875...82,844,072
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Plekhg2
pleckstrin homology and RhoGEF domain containing G2
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,651,902...83,665,063
Ensembl chr 1:83,647,748...83,665,063
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Pou2f2
POU class 2 homeobox 2
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,682,330...80,769,756
Ensembl chr 1:80,685,741...80,724,261
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Prr19
proline rich 19
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,884,529...80,890,712
Ensembl chr 1:80,887,151...80,890,168
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Prx
periaxin
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,785,082...82,807,154
Ensembl chr 1:82,786,815...82,807,407
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Psmc4
proteasome 26S subunit, ATPase 4
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,349,127...83,357,497
Ensembl chr 1:83,348,592...83,357,494
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Rab4b
RAB4B, member RAS oncogene family
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,461,396...82,472,784
Ensembl chr 1:82,461,396...82,472,763
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Rabac1
Rab acceptor 1
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,564,029...80,567,164
Ensembl chr 1:80,564,033...80,567,163
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Rps16
ribosomal protein S16
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,643,066...83,646,056
Ensembl chr 1:83,643,130...83,646,206
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Rps19
ribosomal protein S19
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
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Selenov
selenoprotein V
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,551,473...83,558,756
Ensembl chr 1:83,551,473...83,558,756
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Sertad1
SERTA domain containing 1
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,775,692...82,778,961
Ensembl chr 1:82,775,252...82,779,091
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Sertad3
SERTA domain containing 3
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,763,535...82,767,271
Ensembl chr 1:82,763,149...82,769,001
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Shkbp1
Sh3kbp1 binding protein 1
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,636,797...82,650,330
Ensembl chr 1:82,636,797...82,650,375
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Snrpa
small nuclear ribonucleoprotein polypeptide A
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,481,770...82,490,540
Ensembl chr 1:82,481,770...82,490,538
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Sptbn4
spectrin, beta, non-erythrocytic 4
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,650,750...82,738,345
Ensembl chr 1:82,650,751...82,737,228
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Supt5h
SPT5 homolog, DSIF elongation factor subunit
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,586,713...83,616,971
Ensembl chr 1:83,586,718...83,616,892
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Tgfb1
transforming growth factor, beta 1
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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Timm50
translocase of inner mitochondrial membrane 50
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,574,872...83,582,748
Ensembl chr 1:83,556,757...83,582,793
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Tmem145
transmembrane protein 145
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,891,888...80,901,615
Ensembl chr 1:80,891,927...80,901,611
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Tmem91
transmembrane protein 91
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:81,179,483...81,187,005
Ensembl chr 1:81,179,156...81,185,164
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Ttc9b
tetratricopeptide repeat domain 9B
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:82,953,434...82,955,659
Ensembl chr 1:82,953,434...82,955,616
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Zfp11
zinc finger protein 11
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr12:27,028,067...27,040,846
Ensembl chr12:27,028,115...27,041,365
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Zfp526
zinc finger protein 526
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,807,791...80,817,852
Ensembl chr 1:80,806,972...80,818,180
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Zfp574
zinc finger protein 574
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:80,667,984...80,678,257
Ensembl chr 1:80,664,259...80,679,427
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Znf780b
zinc finger protein 780B
ISO
ClinVar Annotator: match by term: Carpenter syndrome 2
ClinVar
PMID:28492532
NCBI chr 1:83,009,174...83,030,463
Ensembl chr 1:83,009,189...83,082,107
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