Actmap (actin maturation protease) - Rat Genome Database

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Gene: Actmap (actin maturation protease) Rattus norvegicus
Analyze
Symbol: Actmap
Name: actin maturation protease
RGD ID: 1560854
Description: Predicted to enable cysteine-type aminopeptidase activity and initiator methionyl aminopeptidase activity. Predicted to be involved in protein processing. Orthologous to human ACTMAP (actin maturation protease); INTERACTS WITH paracetamol; thioacetamide; 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC499106; RGD1560854; similar to FLJ41131 protein; uncharacterized protein LOC499106; UPF0692 protein C19orf54 homolog
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8191,618,012 - 91,627,490 (+)NCBIGRCr8
mRatBN7.2182,490,313 - 82,499,841 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl182,490,363 - 82,499,841 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx187,893,733 - 87,902,958 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0196,380,338 - 96,389,606 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0189,649,599 - 89,658,824 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0184,008,263 - 84,017,741 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl184,009,268 - 84,015,983 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0185,219,287 - 85,228,680 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4182,274,001 - 82,282,129 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera176,903,275 - 76,910,992 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Actmap
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8191,618,012 - 91,627,490 (+)NCBIGRCr8
mRatBN7.2182,490,313 - 82,499,841 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl182,490,363 - 82,499,841 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx187,893,733 - 87,902,958 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0196,380,338 - 96,389,606 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0189,649,599 - 89,658,824 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0184,008,263 - 84,017,741 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl184,009,268 - 84,015,983 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0185,219,287 - 85,228,680 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4182,274,001 - 82,282,129 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera176,903,275 - 76,910,992 (+)NCBICelera
Cytogenetic Map1q21NCBI
ACTMAP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381940,740,861 - 40,750,477 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1940,740,856 - 40,751,553 (-)EnsemblGRCh38hg38GRCh38
GRCh371941,246,766 - 41,256,382 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361945,938,601 - 45,948,248 (-)NCBINCBI36Build 36hg18NCBI36
Celera1938,047,186 - 38,056,250 (-)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1937,680,124 - 37,689,188 (-)NCBIHuRef
CHM1_11941,246,441 - 41,255,506 (-)NCBICHM1_1
T2T-CHM13v2.01943,561,549 - 43,571,168 (-)NCBIT2T-CHM13v2.0
Actmap
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39726,894,973 - 26,909,611 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl726,895,206 - 26,909,611 (+)EnsemblGRCm39 Ensembl
GRCm38727,195,781 - 27,210,184 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl727,195,781 - 27,210,186 (+)EnsemblGRCm38mm10GRCm38
MGSCv37727,980,800 - 27,989,339 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera721,773,798 - 21,781,240 (+)NCBICelera
Cytogenetic Map7A3NCBI
cM Map715.84NCBI
Actmap
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955578591,129 - 595,427 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955578590,202 - 596,846 (+)NCBIChiLan1.0ChiLan1.0
ACTMAP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22046,999,357 - 47,009,176 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11948,870,306 - 48,880,057 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01937,785,116 - 37,794,864 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11946,292,232 - 46,302,127 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1946,292,232 - 46,302,127 (-)Ensemblpanpan1.1panPan2
ACTMAP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11113,031,906 - 113,037,418 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1113,031,764 - 113,036,229 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1112,434,345 - 112,440,276 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01113,629,248 - 113,636,485 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1113,629,798 - 113,636,071 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11113,190,130 - 113,196,054 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01112,821,736 - 112,827,657 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01113,816,046 - 113,821,975 (+)NCBIUU_Cfam_GSD_1.0
Actmap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934914,596,510 - 14,601,862 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366613,024,984 - 3,029,158 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366613,024,581 - 3,029,867 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACTMAP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl648,962,838 - 48,970,959 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1648,962,829 - 48,971,044 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2644,647,444 - 44,655,686 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACTMAP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1635,195,144 - 35,203,864 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl635,195,869 - 35,203,702 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607313,330,777 - 13,340,885 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Actmap
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624925664,020 - 671,430 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624925659,034 - 670,872 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Actmap
54 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:37
Count of miRNA genes:34
Interacting mature miRNAs:36
Transcripts:ENSRNOT00000057230
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)178479925123479925Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
2302059Pia36Pristane induced arthritis QTL 363.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)14333300288333002Rat
1300121Hrtrt1Heart rate QTL 13.7heart pumping trait (VT:2000009)heart rate (CMO:0000002)165789093115540829Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)166023617118608521Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)122340647102268831Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
631512Scl6Serum cholesterol level QTL 69.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)17219768090508767Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
2313072Bss53Bone structure and strength QTL 534.30.0001tibia length (VT:0004357)tibia length (CMO:0000450)143284731118944897Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
2313078Bss54Bone structure and strength QTL 543.50.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)177876254106047988Rat
2313083Bmd74Bone mineral density QTL 7440.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)182174743118944897Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)148963584144267916Rat
4889494Scort2Serum corticosterone level QTL 24.2blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)180592172125592172Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)15673266898773277Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13273727390665040Rat
61344Bp29Blood pressure QTL 297.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)178350581123350581Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)177494165122494165Rat
2313094Bss58Bone structure and strength QTL 583.70.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143284731118944897Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)15386304190532583Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)156949932101949932Rat
2313099Bss56Bone structure and strength QTL 562.40.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143284731118944897Rat
2313098Bmd70Bone mineral density QTL 703.60.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)143284731118944897Rat
152025249Scl82Serum cholesterol level QTL 824.77blood cholesterol amount (VT:0000180)15034351099980958Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)177857876122857876Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)178430536123430536Rat
2313051Bss57Bone structure and strength QTL 573.70.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)143284731118944897Rat
61433Cia2Collagen induced arthritis QTL 25joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)17843075491209302Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001346308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063270865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001835698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001835699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_598764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC123095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000057230   ⟹   ENSRNOP00000054056
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl184,009,268 - 84,015,918 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000081121   ⟹   ENSRNOP00000069948
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl182,490,363 - 82,499,841 (+)Ensembl
Rnor_6.0 Ensembl184,009,268 - 84,015,983 (+)Ensembl
RefSeq Acc Id: NM_001346308   ⟹   NP_001333237
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,618,012 - 91,627,490 (+)NCBI
mRatBN7.2182,490,363 - 82,499,841 (+)NCBI
RefSeq Acc Id: XM_039087149   ⟹   XP_038943077
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,618,356 - 91,627,490 (+)NCBI
mRatBN7.2182,490,745 - 82,499,841 (+)NCBI
RefSeq Acc Id: XM_039087150   ⟹   XP_038943078
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,619,017 - 91,625,727 (+)NCBI
mRatBN7.2182,490,822 - 82,498,034 (+)NCBI
RefSeq Acc Id: XM_039087153   ⟹   XP_038943081
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,619,017 - 91,627,490 (+)NCBI
mRatBN7.2182,490,822 - 82,498,034 (+)NCBI
RefSeq Acc Id: XM_039087156   ⟹   XP_038943084
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,619,278 - 91,627,490 (+)NCBI
mRatBN7.2182,491,629 - 82,499,841 (+)NCBI
RefSeq Acc Id: XM_039087169   ⟹   XP_038943097
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,619,373 - 91,627,490 (+)NCBI
mRatBN7.2182,492,790 - 82,499,841 (+)NCBI
RefSeq Acc Id: XM_039087179   ⟹   XP_038943107
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,619,373 - 91,627,490 (+)NCBI
mRatBN7.2182,492,790 - 82,499,841 (+)NCBI
RefSeq Acc Id: XM_039087180   ⟹   XP_038943108
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,620,443 - 91,627,490 (+)NCBI
mRatBN7.2182,492,790 - 82,499,841 (+)NCBI
RefSeq Acc Id: XM_039087184   ⟹   XP_038943112
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,619,339 - 91,627,490 (+)NCBI
mRatBN7.2182,491,670 - 82,499,841 (+)NCBI
RefSeq Acc Id: XM_039087189   ⟹   XP_038943117
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,619,373 - 91,627,490 (+)NCBI
mRatBN7.2182,492,790 - 82,499,841 (+)NCBI
RefSeq Acc Id: XM_039087191   ⟹   XP_038943119
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,619,313 - 91,627,490 (+)NCBI
mRatBN7.2182,491,661 - 82,499,841 (+)NCBI
RefSeq Acc Id: XM_039087193   ⟹   XP_038943121
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,618,040 - 91,627,490 (+)NCBI
mRatBN7.2182,490,313 - 82,499,841 (+)NCBI
RefSeq Acc Id: XM_039087199   ⟹   XP_038943127
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,619,373 - 91,627,490 (+)NCBI
mRatBN7.2182,492,791 - 82,499,841 (+)NCBI
RefSeq Acc Id: XM_063270865   ⟹   XP_063126935
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8191,619,372 - 91,627,490 (+)NCBI
Ensembl Acc Id: ENSRNOP00000054056   ⟸   ENSRNOT00000057230
Ensembl Acc Id: ENSRNOP00000069948   ⟸   ENSRNOT00000081121
RefSeq Acc Id: XP_038943121   ⟸   XM_039087193
- Peptide Label: isoform X5
RefSeq Acc Id: NP_001333237   ⟸   NM_001346308
- UniProtKB: A0A0G2JWN4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038943077   ⟸   XM_039087149
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JWN4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038943078   ⟸   XM_039087150
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038943081   ⟸   XM_039087153
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038943084   ⟸   XM_039087156
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038943119   ⟸   XM_039087191
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038943112   ⟸   XM_039087184
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038943097   ⟸   XM_039087169
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038943107   ⟸   XM_039087179
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038943117   ⟸   XM_039087189
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038943108   ⟸   XM_039087180
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038943127   ⟸   XM_039087199
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063126935   ⟸   XM_063270865
- Peptide Label: isoform X5

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1M597-F1-model_v2 AlphaFold F1M597 1-357 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1560854 AgrOrtholog
BioCyc Gene G2FUF-60321 BioCyc
Ensembl Genes ENSRNOG00000037715 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000081121.2 UniProtKB/TrEMBL
InterPro UPF0692 UniProtKB/TrEMBL
KEGG Report rno:499106 UniProtKB/TrEMBL
NCBI Gene 499106 ENTREZGENE
PANTHER PTHR28631 UniProtKB/TrEMBL
  UPF0692 PROTEIN C19ORF54 UniProtKB/TrEMBL
Pfam ACTMAP-like_C UniProtKB/TrEMBL
PhenoGen Actmap PhenoGen
RatGTEx ENSRNOG00000037715 RatGTEx
Superfamily-SCOP Formin homology 2 domain (FH2 domain) UniProtKB/TrEMBL
UniProt A0A0G2JWN4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-10-27 Actmap  actin maturation protease  RGD1560854  similar to FLJ41131 protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1560854  similar to FLJ41131 protein   RGD1560854_predicted  similar to FLJ41131 protein (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1560854_predicted  similar to FLJ41131 protein (predicted)  LOC499106  similar to FLJ41131 protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC499106  similar to FLJ41131 protein      Symbol and Name status set to provisional 70820 PROVISIONAL