Actmap (actin maturation protease) - Rat Genome Database

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Gene: Actmap (actin maturation protease) Ictidomys tridecemlineatus
Analyze
Symbol: Actmap
Name: actin maturation protease
RGD ID: 12522519
Description: ENCODES a protein that exhibits aminopeptidase activity (inferred); cysteine-type aminopeptidase activity (inferred); initiator methionyl aminopeptidase activity (inferred); INVOLVED IN protein processing (inferred); proteolysis (inferred); ASSOCIATED WITH Carpenter Syndrome 2 (ortholog); congenital hypoplastic anemia (ortholog); craniosynostosis (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: chromosome unknown C19orf54 homolog; chromosome unknown open reading frame, human C19orf54; CUNH19orf54; LOC101965077; UPF0692 protein C19orf54 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934914,596,510 - 14,601,862 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366613,024,984 - 3,029,158 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366613,024,581 - 3,029,867 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

Genomics

Comparative Map Data
Actmap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934914,596,510 - 14,601,862 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366613,024,984 - 3,029,158 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366613,024,581 - 3,029,867 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACTMAP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381940,740,861 - 40,750,477 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1940,740,856 - 40,751,553 (-)EnsemblGRCh38hg38GRCh38
GRCh371941,246,766 - 41,256,382 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361945,938,601 - 45,948,248 (-)NCBINCBI36Build 36hg18NCBI36
Celera1938,047,186 - 38,056,250 (-)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1937,680,124 - 37,689,188 (-)NCBIHuRef
CHM1_11941,246,441 - 41,255,506 (-)NCBICHM1_1
T2T-CHM13v2.01943,561,549 - 43,571,168 (-)NCBIT2T-CHM13v2.0
Actmap
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39726,894,973 - 26,909,611 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl726,895,206 - 26,909,611 (+)EnsemblGRCm39 Ensembl
GRCm38727,195,781 - 27,210,184 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl727,195,781 - 27,210,186 (+)EnsemblGRCm38mm10GRCm38
MGSCv37727,980,800 - 27,989,339 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera721,773,798 - 21,781,240 (+)NCBICelera
Cytogenetic Map7A3NCBI
cM Map715.84NCBI
Actmap
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8191,618,012 - 91,627,490 (+)NCBIGRCr8
mRatBN7.2182,490,313 - 82,499,841 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl182,490,363 - 82,499,841 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx187,893,733 - 87,902,958 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0196,380,338 - 96,389,606 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0189,649,599 - 89,658,824 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0184,008,263 - 84,017,741 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl184,009,268 - 84,015,983 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0185,219,287 - 85,228,680 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4182,274,001 - 82,282,129 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera176,903,275 - 76,910,992 (+)NCBICelera
Cytogenetic Map1q21NCBI
Actmap
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955578591,129 - 595,427 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955578590,202 - 596,846 (+)NCBIChiLan1.0ChiLan1.0
ACTMAP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22046,999,357 - 47,009,176 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11948,870,306 - 48,880,057 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01937,785,116 - 37,794,864 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11946,292,232 - 46,302,127 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1946,292,232 - 46,302,127 (-)Ensemblpanpan1.1panPan2
ACTMAP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11113,031,906 - 113,037,418 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1113,031,764 - 113,036,229 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1112,434,345 - 112,440,276 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01113,629,248 - 113,636,485 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1113,629,798 - 113,636,071 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11113,190,130 - 113,196,054 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01112,821,736 - 112,827,657 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01113,816,046 - 113,821,975 (+)NCBIUU_Cfam_GSD_1.0
ACTMAP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl648,962,838 - 48,970,959 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1648,962,829 - 48,971,044 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2644,647,444 - 44,655,686 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACTMAP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1635,195,144 - 35,203,864 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl635,195,869 - 35,203,702 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607313,330,777 - 13,340,885 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Actmap
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624925664,020 - 671,430 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624925659,034 - 670,872 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSSTOT00000028950   ⟹   ENSSTOP00000021683
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049366613,024,984 - 3,029,158 (-)Ensembl
RefSeq Acc Id: XM_005336444   ⟹   XP_005336501
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934914,596,510 - 14,601,849 (-)NCBI
SpeTri2.0NW_0049366613,024,581 - 3,029,867 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013363429   ⟹   XP_013218883
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934914,596,510 - 14,601,849 (-)NCBI
SpeTri2.0NW_0049366613,024,581 - 3,029,867 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040279985   ⟹   XP_040135919
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934914,596,510 - 14,601,859 (-)NCBI
RefSeq Acc Id: XM_040279986   ⟹   XP_040135920
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934914,596,510 - 14,601,862 (-)NCBI
RefSeq Acc Id: XM_040279987   ⟹   XP_040135921
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934914,596,510 - 14,601,849 (-)NCBI
RefSeq Acc Id: XM_040279988   ⟹   XP_040135922
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934914,596,510 - 14,598,776 (-)NCBI
RefSeq Acc Id: XP_013218883   ⟸   XM_013363429
- Peptide Label: isoform X1
- UniProtKB: I3NBD6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005336501   ⟸   XM_005336444
- Peptide Label: isoform X1
- UniProtKB: I3NBD6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040135920   ⟸   XM_040279986
- Peptide Label: isoform X3
RefSeq Acc Id: XP_040135919   ⟸   XM_040279985
- Peptide Label: isoform X2
RefSeq Acc Id: XP_040135921   ⟸   XM_040279987
- Peptide Label: isoform X4
RefSeq Acc Id: XP_040135922   ⟸   XM_040279988
- Peptide Label: isoform X5
Ensembl Acc Id: ENSSTOP00000021683   ⟸   ENSSTOT00000028950


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000020074 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000028950.2 UniProtKB/TrEMBL
InterPro UPF0692 UniProtKB/TrEMBL
NCBI Gene LOC101965077 ENTREZGENE
PANTHER PTHR28631 UniProtKB/TrEMBL
  UPF0692 PROTEIN C19ORF54 UniProtKB/TrEMBL
Pfam ACTMAP-like_C UniProtKB/TrEMBL
UniProt I3NBD6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-08-08 Actmap  actin maturation protease  CUNH19orf54  actin maturation protease  Symbol and/or name change 5135510 APPROVED
2022-10-18 CUNH19orf54  actin maturation protease  CUNH19orf54  chromosome unknown C19orf54 homolog  Symbol and/or name change 5135510 APPROVED
2017-07-13 CUNH19orf54  chromosome unknown C19orf54 homolog  LOC101965077  chromosome unknown open reading frame, human C19orf54  Symbol and/or name change 5135510 APPROVED