Actmap (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024409349 | 14,596,510 - 14,601,862 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936661 | 3,024,984 - 3,029,158 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936661 | 3,024,581 - 3,029,867 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
ACTMAP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 19 | 40,740,861 - 40,750,477 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 40,740,856 - 40,751,553 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 19 | 41,246,766 - 41,256,382 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 45,938,601 - 45,948,248 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 19 | 38,047,186 - 38,056,250 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | q13.2 | NCBI | | | | | HuRef | 19 | 37,680,124 - 37,689,188 (-) | NCBI | | HuRef | | | CHM1_1 | 19 | 41,246,441 - 41,255,506 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 43,561,549 - 43,571,168 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Actmap (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 7 | 26,894,973 - 26,909,611 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 26,895,206 - 26,909,611 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 27,195,781 - 27,210,184 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 27,195,781 - 27,210,186 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 27,980,800 - 27,989,339 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | Celera | 7 | 21,773,798 - 21,781,240 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | A3 | NCBI | | | | | cM Map | 7 | 15.84 | NCBI | | | | |
|
Actmap (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 91,618,012 - 91,627,490 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 82,490,313 - 82,499,841 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 82,490,363 - 82,499,841 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 87,893,733 - 87,902,958 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 96,380,338 - 96,389,606 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 89,649,599 - 89,658,824 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 84,008,263 - 84,017,741 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 84,009,268 - 84,015,983 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 85,219,287 - 85,228,680 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 82,274,001 - 82,282,129 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 1 | 76,903,275 - 76,910,992 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q21 | NCBI | | | | |
|
Actmap (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955578 | 591,129 - 595,427 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955578 | 590,202 - 596,846 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
ACTMAP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 20 | 46,999,357 - 47,009,176 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 48,870,306 - 48,880,057 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 37,785,116 - 37,794,864 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 19 | 46,292,232 - 46,302,127 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 19 | 46,292,232 - 46,302,127 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
ACTMAP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 1 | 113,031,906 - 113,037,418 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 1 | 113,031,764 - 113,036,229 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 1 | 112,434,345 - 112,440,276 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 1 | 113,629,248 - 113,636,485 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 1 | 113,629,798 - 113,636,071 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 1 | 113,190,130 - 113,196,054 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 1 | 112,821,736 - 112,827,657 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 1 | 113,816,046 - 113,821,975 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
ACTMAP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 6 | 48,962,838 - 48,970,959 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 48,962,829 - 48,971,044 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 44,647,444 - 44,655,686 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
ACTMAP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 6 | 35,195,144 - 35,203,864 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 35,195,869 - 35,203,702 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666073 | 13,330,777 - 13,340,885 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Actmap (Heterocephalus glaber - naked mole-rat) |
|